Cbr1 (carbonyl reductase 1) - Rat Genome Database

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Gene: Cbr1 (carbonyl reductase 1) Mus musculus
Analyze
Symbol: Cbr1
Name: carbonyl reductase 1
RGD ID: 737547
MGI Page MGI
Description: Enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor. Involved in glucocorticoid metabolic process. Predicted to be located in microvillus. Is expressed in several structures, including alimentary system; cardiovascular system; genitourinary system; nervous system; and sensory organ. Orthologous to human CBR1 (carbonyl reductase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 15-hydroxyprostaglandin dehydrogenase; 20-beta-hydroxysteroid dehydrogenase; alcohol dehydrogenase [NAD(P)+] CBR1; AW261796; C; carbonyl reductase [NADPH] 1; Carbonyl reductase [NADPH] 1 (NADPH-dependent carbonyl reductase 1); Cbr; CR; NADPH-dependent carbonyl reductase 1; PG-9-KR; prostaglandin 9-ketoreductase; prostaglandin-E(2) 9-reductase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: Cbr1b  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391693,404,752 - 93,407,226 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1693,402,741 - 93,407,393 (+)EnsemblGRCm39 Ensembl
GRCm381693,607,837 - 93,610,349 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1693,605,853 - 93,610,505 (+)EnsemblGRCm38mm10GRCm38
MGSCv371693,608,082 - 93,610,594 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361693,496,379 - 93,498,862 (+)NCBIMGSCv36mm8
Celera1694,690,584 - 94,693,095 (+)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1654.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-naphthoquinone  (ISO)
1,4-dithiothreitol  (ISO)
1,4-naphthoquinone  (ISO)
13-dihydrodaunorubicin  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-acetamidofluorene  (EXP)
2-amino-14,16-dimethyloctadecan-3-ol  (ISO)
2-hydroxypropanoic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-amino-2,6-dinitrotoluene  (ISO)
4-Benzoylpyridine  (ISO)
5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole  (ISO)
6-propyl-2-thiouracil  (ISO)
9,10-phenanthroquinone  (ISO)
Aloe emodin  (ISO)
amiodarone  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
andrographolide  (EXP)
antimonite  (ISO)
antimycin A  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atrazine  (ISO)
benzbromarone  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (EXP,ISO)
bexarotene  (ISO)
bisphenol A  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
butylated hydroxyanisole  (ISO)
captan  (EXP)
carbamazepine  (ISO)
carbon nanotube  (EXP)
CGP 52608  (ISO)
chenodeoxycholic acid  (ISO)
chloroprene  (EXP)
ciprofibrate  (EXP)
cisplatin  (ISO)
clofibrate  (ISO)
Clofop  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
Cuprizon  (ISO)
curcumin  (ISO)
cyclosporin A  (EXP,ISO)
daunorubicin  (ISO)
deguelin  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (EXP)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
dibenzofurans  (EXP)
dibutyl phthalate  (EXP,ISO)
diclofenac  (ISO)
diethyl maleate  (EXP)
dioxygen  (EXP,ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
diquat  (EXP)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
emodin  (ISO)
endosulfan  (ISO)
etacrynic acid  (ISO)
ethanol  (EXP)
fenpyroximate  (ISO)
fenthion  (EXP)
flutamide  (ISO)
folpet  (EXP)
FR900359  (ISO)
Frangulin A  (ISO)
Frangulin B  (ISO)
furan  (EXP,ISO)
genistein  (EXP,ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
griseofulvin  (EXP)
hexane-2,3-dione  (ISO)
hydrazine  (EXP)
indometacin  (ISO)
inulin  (EXP)
isatin  (ISO)
Isoxanthohumol  (ISO)
ivermectin  (ISO)
L-1,4-dithiothreitol  (ISO)
L-ethionine  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (ISO)
m-xylene  (ISO)
menadione  (ISO)
methamphetamine  (ISO)
methimazole  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
mono(2-ethylhexyl) phthalate  (EXP)
monosodium L-glutamate  (EXP)
N-methyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosomorpholine  (ISO)
NADP zwitterion  (ISO)
NADP(+)  (ISO)
naphthalenes  (ISO)
nefazodone  (ISO)
nimesulide  (ISO)
omeprazole  (ISO)
oxcarbazepine  (ISO)
paracetamol  (ISO)
parathion  (EXP)
pentachlorophenol  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP,ISO)
phorbol 13-acetate 12-myristate  (ISO)
phorone  (ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rac-lactic acid  (ISO)
Rebamipide  (ISO)
resveratrol  (EXP,ISO)
rotenone  (ISO)
rutin  (ISO)
S-nitrosoglutathione  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sodium dichromate  (EXP)
sophoraflavanone B  (ISO)
streptozocin  (ISO)
T-2 toxin  (ISO)
tebufenpyrad  (ISO)
testosterone  (ISO)
testosterone enanthate  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
thalidomide  (EXP)
thapsigargin  (ISO)
thioacetamide  (ISO)
tiaprofenic acid  (ISO)
titanium dioxide  (EXP)
triclosan  (ISO)
undecane  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
xanthohumol  (ISO)
zearalenone  (EXP)
zoledronic acid  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
# Reference Title Reference Citation
1. Effect of experimental kidney disease on the functional expression of hepatic reductases. Alshogran OY, etal., Drug Metab Dispos. 2015 Jan;43(1):100-6. doi: 10.1124/dmd.114.061150. Epub 2014 Oct 20.
2. A gene expression map of human chromosome 21 orthologues in the mouse. Gitton Y, etal., Nature 2002 Dec 5;420(6915):586-90.
3. Expression of genes controlling transport and catabolism of prostaglandin E2 in lipopolysaccharide fever. Ivanov AI, etal., Am J Physiol Regul Integr Comp Physiol. 2003 Mar;284(3):R698-706. Epub 2002 Oct 24.
4. Proteomic and transcriptomic analysis for streptozotocin-induced diabetic rat pancreas in response to fungal polysaccharide treatments. Kim SW, etal., Proteomics. 2008 Jun;8(11):2344-61.
5. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
6. MGDs mouse GO annotations MGD data from the GO Consortium
7. New developments in anthracycline-induced cardiotoxicity. Mordente A, etal., Curr Med Chem. 2009;16(13):1656-72.
8. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
9. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
10. Human chromosome 21 gene expression atlas in the mouse. Reymond A, etal., Nature 2002 Dec 5;420(6915):582-6.
11. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
12. Doxorubicin pathways: pharmacodynamics and adverse effects. Thorn CF, etal., Pharmacogenet Genomics. 2011 Jul;21(7):440-6. doi: 10.1097/FPC.0b013e32833ffb56.
13. Prostaglandin F synthase. Watanabe K, Prostaglandins Other Lipid Mediat. 2002 Aug;68-69:401-7.
Additional References at PubMed
PMID:1380419   PMID:8406490   PMID:8661038   PMID:8808466   PMID:8889808   PMID:9070862   PMID:9244437   PMID:9750193   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11082196  
PMID:11217851   PMID:11336779   PMID:11374901   PMID:12466851   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15499018   PMID:16141072   PMID:16141073   PMID:16523244   PMID:16885194  
PMID:16944949   PMID:20728534   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22794259   PMID:23732109   PMID:24457600   PMID:28878267   PMID:29382714   PMID:29676259   PMID:31955137  
PMID:32325033   PMID:32843708   PMID:33601422   PMID:33785425   PMID:34474245  


Genomics

Comparative Map Data
Cbr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391693,404,752 - 93,407,226 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1693,402,741 - 93,407,393 (+)EnsemblGRCm39 Ensembl
GRCm381693,607,837 - 93,610,349 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1693,605,853 - 93,610,505 (+)EnsemblGRCm38mm10GRCm38
MGSCv371693,608,082 - 93,610,594 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361693,496,379 - 93,498,862 (+)NCBIMGSCv36mm8
Celera1694,690,584 - 94,693,095 (+)NCBICelera
Cytogenetic Map16C4NCBI
cM Map1654.53NCBI
CBR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382136,070,024 - 36,073,164 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2136,069,941 - 36,073,166 (+)EnsemblGRCh38hg38GRCh38
GRCh372137,442,322 - 37,445,462 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362136,364,155 - 36,367,332 (+)NCBINCBI36Build 36hg18NCBI36
Build 342136,364,154 - 36,367,332NCBI
Celera2122,641,173 - 22,644,350 (+)NCBICelera
Cytogenetic Map21q22.12NCBI
HuRef2122,920,731 - 22,923,910 (+)NCBIHuRef
CHM1_12137,004,079 - 37,007,256 (+)NCBICHM1_1
T2T-CHM13v2.02134,453,083 - 34,456,223 (+)NCBIT2T-CHM13v2.0
Cbr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81146,346,405 - 46,348,815 (+)NCBIGRCr8
mRatBN7.21132,860,571 - 32,862,981 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1132,857,991 - 32,895,275 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 Ensembl1132,908,950 - 32,911,393 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1141,554,857 - 41,557,234 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01134,226,398 - 34,228,775 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01133,387,189 - 33,389,552 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01133,813,041 - 33,815,418 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01137,436,992 - 37,439,368 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41133,787,957 - 33,790,320 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11133,844,199 - 33,846,562 (+)NCBI
Celera1132,503,106 - 32,505,469 (+)NCBICelera
RH 3.4 Map11 RGD
Cytogenetic Map11q11NCBI
Cbr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540735,351,601 - 35,354,510 (-)NCBIChiLan1.0ChiLan1.0
CBR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22232,191,135 - 32,194,450 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12127,051,164 - 27,054,375 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02122,440,726 - 22,443,950 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12135,800,177 - 35,803,458 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2135,800,177 - 35,803,458 (+)Ensemblpanpan1.1panPan2
LOC610164
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13131,316,573 - 31,321,413 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3130,416,847 - 30,421,683 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03130,613,805 - 30,618,648 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.13130,485,378 - 30,490,206 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03130,499,405 - 30,504,233 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03130,990,002 - 30,995,329 (+)NCBIUU_Cfam_GSD_1.0
Cbr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440497130,876,539 - 30,898,111 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365006,458,721 - 6,591,928 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365006,569,708 - 6,591,266 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CBR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13199,617,199 - 199,622,407 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113199,617,406 - 199,622,407 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
LOC103218526
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1280,096,743 - 80,099,982 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660547,919,444 - 7,922,741 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Cbr1
87 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:100
Count of miRNA genes:96
Interacting mature miRNAs:99
Transcripts:ENSMUST00000039659
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301125Sluc27_msusceptibility to lung cancer 27 (mouse)Not determined166160864495608764Mouse
4141113Tgq28_mtriglyceride QTL 28 (mouse)Not determined6298664696986646Mouse
1300928Etia_methanol induced activation (mouse)Not determined166331390797314016Mouse
1558740Bpq9_mblood pressure QTL 9 (mouse)Not determined166332733697327472Mouse
1302194Pgia10_mproteoglycan induced arthritis 10 (mouse)Not determined166860072298008968Mouse
1301032Tauph_mtau phosphorylation (mouse)Not determined166907613298008968Mouse
11049573Lmr18b_mleishmaniasis resistance 18b (mouse)166912761198008968Mouse
11049574Lmr18a_mleishmaniasis resistance 18a (mouse)166912761198008968Mouse
4142262Lmr18_mleishmaniasis resistance 18 (mouse)Not determined166912761198008968Mouse
11522753Cocia19_mcocaine-induced activity, QTL 19 (mouse)166925448298008968Mouse
1301598Renf2_mrenal failure 2 (mouse)Not determined167038025298008968Mouse

Markers in Region
RH129182  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381693,610,129 - 93,610,293UniSTSGRCm38
MGSCv371693,610,374 - 93,610,538UniSTSGRCm37
Celera1694,721,365 - 94,721,529UniSTS
Celera1694,692,875 - 94,693,039UniSTS
Cytogenetic Map16C4UniSTS
cM Map1667.0UniSTS
AW261796  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381693,610,120 - 93,610,268UniSTSGRCm38
GRCm381693,630,235 - 93,630,383UniSTSGRCm38
MGSCv371693,610,365 - 93,610,513UniSTSGRCm37
MGSCv371693,630,480 - 93,630,628UniSTSGRCm37
Celera1691,306,413 - 91,306,561UniSTS
Celera1694,692,866 - 94,693,014UniSTS
Cytogenetic Map16C4UniSTS
cM Map1667.0UniSTS
Whitehead/MRC_RH16982.15UniSTS
Cbr1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381693,630,266 - 93,630,436UniSTSGRCm38
GRCm381693,610,151 - 93,610,322UniSTSGRCm38
MGSCv371693,630,511 - 93,630,681UniSTSGRCm37
MGSCv371693,610,396 - 93,610,567UniSTSGRCm37
Celera1694,692,897 - 94,693,068UniSTS
Celera1691,306,360 - 91,306,530UniSTS
Cytogenetic Map16C4UniSTS
cM Map1667.0UniSTS
Cbr1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map16C4UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000039659   ⟹   ENSMUSP00000049394
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,404,725 - 93,407,393 (+)Ensembl
GRCm38.p6 Ensembl1693,607,837 - 93,610,505 (+)Ensembl
RefSeq Acc Id: ENSMUST00000231450
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,402,741 - 93,407,232 (+)Ensembl
GRCm38.p6 Ensembl1693,605,853 - 93,610,344 (+)Ensembl
RefSeq Acc Id: ENSMUST00000231762   ⟹   ENSMUSP00000155872
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,404,777 - 93,406,805 (+)Ensembl
GRCm38.p6 Ensembl1693,607,889 - 93,609,917 (+)Ensembl
RefSeq Acc Id: ENSMUST00000232551
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1693,402,997 - 93,405,002 (+)Ensembl
GRCm38.p6 Ensembl1693,606,109 - 93,608,114 (+)Ensembl
RefSeq Acc Id: NM_007620   ⟹   NP_031646
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391693,404,752 - 93,407,226 (+)NCBI
GRCm381693,607,837 - 93,610,349 (+)ENTREZGENE
MGSCv371693,608,082 - 93,610,594 (+)RGD
Celera1694,690,584 - 94,693,095 (+)RGD
cM Map16 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_031646   ⟸   NM_007620
- UniProtKB: Q91X28 (UniProtKB/Swiss-Prot),   P48758 (UniProtKB/Swiss-Prot),   B2RXY7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000155872   ⟸   ENSMUST00000231762
RefSeq Acc Id: ENSMUSP00000049394   ⟸   ENSMUST00000039659

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P48758-F1-model_v2 AlphaFold P48758 1-277 view protein structure

Promoters
RGD ID:13674500
Promoter ID:EPDNEW_M21399
Type:initiation region
Name:Cbr1_1
Description:Mus musculus carbonyl reductase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381693,607,864 - 93,607,924EPDNEW
RGD ID:6826881
Promoter ID:MM_KWN:21777
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000047490
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361693,607,924 - 93,608,424 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88284 AgrOrtholog
Ensembl Genes ENSMUSG00000051483 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000039659 ENTREZGENE
  ENSMUST00000039659.9 UniProtKB/Swiss-Prot
  ENSMUST00000231762.2 UniProtKB/TrEMBL
Gene3D-CATH NAD(P)-binding Rossmann-like Domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro CBR1-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NAD(P)-bd_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Sc_DH/Rdtase_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SDR_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12408 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88284 ENTREZGENE
NCBI Gene 12408 ENTREZGENE
PANTHER CARBONYL REDUCTASE 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CARBONYL REDUCTASE [NADPH] 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam adh_short UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB CBR1 RGD
PhenoGen Cbr1 PhenoGen
PRINTS GDHRDH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SDRFAMILY UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ADH_SHORT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51735 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A338P684_MOUSE UniProtKB/TrEMBL
  B2RXY7 ENTREZGENE, UniProtKB/TrEMBL
  CBR1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q91X28 ENTREZGENE
UniProt Secondary Q91X28 UniProtKB/Swiss-Prot