CD47 (CD47 molecule) - Rat Genome Database

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Gene: CD47 (CD47 molecule) Homo sapiens
Analyze
Symbol: CD47
Name: CD47 molecule
RGD ID: 737350
HGNC Page HGNC:1682
Description: Enables cell-cell adhesion mediator activity and thrombospondin receptor activity. Involved in several processes, including cellular response to interleukin-12; positive regulation of T cell activation; and regulation of cytokine production. Acts upstream of or within ATP export. Located in cell surface.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: antigen identified by monoclonal antibody 1D8; antigenic surface determinant protein OA3; CD47 antigen (Rh-related antigen, integrin-associated signal transducer); CD47 glycoprotein; IAP; integrin associated protein; integrin-associated protein; integrin-associated signal transducer; leukocyte surface antigen CD47; MER6; OA3; Rh-related antigen
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383108,043,091 - 108,091,031 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3108,043,091 - 108,091,862 (-)EnsemblGRCh38hg38GRCh38
GRCh373107,761,938 - 107,809,878 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363109,244,631 - 109,292,625 (-)NCBINCBI36Build 36hg18NCBI36
Build 343109,244,836 - 109,292,592NCBI
Celera3106,158,598 - 106,206,555 (-)NCBICelera
Cytogenetic Map3q13.12NCBI
HuRef3105,135,236 - 105,183,196 (-)NCBIHuRef
CHM1_13107,726,104 - 107,774,070 (-)NCBICHM1_1
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2,4-trimethylbenzene  (ISO)
1,2-dimethylhydrazine  (ISO)
17alpha-ethynylestradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4,6-trinitrobenzenesulfonic acid  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5,5'-tetrabromobisphenol A  (ISO)
3,4-methylenedioxymethamphetamine  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acetazolamide  (ISO)
acrolein  (EXP)
acrylamide  (EXP)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (EXP)
alpha-pinene  (EXP)
amitrole  (ISO)
antirheumatic drug  (EXP)
Aroclor 1254  (ISO)
beauvericin  (EXP)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bis(2-chloroethyl) sulfide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Bisphenol B  (EXP)
bisphenol F  (EXP,ISO)
butanal  (EXP)
cadmium atom  (EXP)
cadmium dichloride  (ISO)
cannabidiol  (EXP)
carbon nanotube  (EXP,ISO)
CGP 52608  (EXP)
chlorpyrifos  (ISO)
chrysene  (ISO)
cisplatin  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (EXP)
cocaine  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
crocidolite asbestos  (ISO)
curcumin  (ISO)
cycloheximide  (EXP)
cyclosporin A  (EXP,ISO)
dibutyl phthalate  (ISO)
disodium selenite  (EXP)
disulfiram  (EXP)
dorsomorphin  (EXP)
doxorubicin  (EXP)
endosulfan  (ISO)
enniatin  (EXP)
ethanol  (ISO)
fenthion  (ISO)
flavonoids  (ISO)
folic acid  (ISO)
fonofos  (EXP)
formaldehyde  (EXP)
furan  (ISO)
gamma-hexachlorocyclohexane  (ISO)
hypochlorous acid  (ISO)
irinotecan  (EXP)
iron(III) nitrilotriacetate  (ISO)
ivermectin  (EXP)
ketoconazole  (EXP)
lead diacetate  (ISO)
methidathion  (ISO)
methimazole  (ISO)
methotrexate  (EXP)
methyl methanesulfonate  (EXP)
methylmercury chloride  (EXP)
methylmercury(1+)  (ISO)
methylparaben  (EXP)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodiethylamine  (ISO)
nickel atom  (EXP)
nitrofen  (ISO)
nonanoic acid  (ISO)
NSC 23766  (ISO)
ozone  (EXP,ISO)
p-toluidine  (ISO)
paclitaxel  (EXP)
paracetamol  (ISO)
paraquat  (EXP,ISO)
parathion  (EXP)
pentachlorophenol  (ISO)
phenobarbital  (ISO)
phenytoin  (ISO)
pirinixic acid  (ISO)
propanal  (EXP)
resveratrol  (EXP)
SB 431542  (EXP)
senecionine  (EXP,ISO)
silver atom  (ISO)
silver(0)  (ISO)
sulfadimethoxine  (ISO)
sunitinib  (EXP)
temozolomide  (EXP)
terbufos  (EXP)
tert-butyl hydroperoxide  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
toluene 2,4-diisocyanate  (ISO)
torcetrapib  (EXP)
trichloroethene  (ISO)
trichostatin A  (EXP)
Triptolide  (ISO)
troglitazone  (ISO)
tungsten  (ISO)
valproic acid  (EXP,ISO)
vancomycin  (ISO)
venlafaxine hydrochloride  (ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1394148   PMID:2277087   PMID:7691831   PMID:7998989   PMID:8294396   PMID:8550562   PMID:8563755   PMID:9169439   PMID:9872987   PMID:10037797   PMID:10397731   PMID:10429193  
PMID:10469599   PMID:10545994   PMID:10549293   PMID:11306274   PMID:11331301   PMID:11454874   PMID:11509594   PMID:11907074   PMID:11980922   PMID:12176912   PMID:12218055   PMID:12351399  
PMID:12370491   PMID:12393442   PMID:12393467   PMID:12477932   PMID:12609828   PMID:12646616   PMID:12690108   PMID:12736272   PMID:12902472   PMID:14551146   PMID:14702039   PMID:14747477  
PMID:14759258   PMID:14966135   PMID:15292185   PMID:15359629   PMID:15383453   PMID:15489334   PMID:15498560   PMID:15700281   PMID:15725479   PMID:15842360   PMID:15880429   PMID:15917238  
PMID:16291597   PMID:16581280   PMID:16691243   PMID:16697668   PMID:16951312   PMID:17098740   PMID:17360380   PMID:17363705   PMID:17572512   PMID:18186923   PMID:18332220   PMID:18497546  
PMID:18523271   PMID:18524990   PMID:18657508   PMID:18675774   PMID:18855618   PMID:18954403   PMID:18979398   PMID:19144568   PMID:19322201   PMID:19360900   PMID:19628875   PMID:19632178  
PMID:19661269   PMID:19748659   PMID:19794081   PMID:19952055   PMID:20033473   PMID:20299253   PMID:20364320   PMID:20675593   PMID:20705613   PMID:20826801   PMID:20923780   PMID:21125662  
PMID:21178137   PMID:21203512   PMID:21211546   PMID:21343308   PMID:21401967   PMID:21873635   PMID:22014686   PMID:22079249   PMID:22215724   PMID:22427202   PMID:22451913   PMID:22511785  
PMID:22535707   PMID:22641236   PMID:22734047   PMID:22815286   PMID:22870271   PMID:22874555   PMID:22990013   PMID:23011546   PMID:23206327   PMID:23275336   PMID:23376485   PMID:23642736  
PMID:23669395   PMID:23690610   PMID:23774794   PMID:24006483   PMID:24022490   PMID:24026300   PMID:24143245   PMID:24269920   PMID:24523067   PMID:24550402   PMID:24631171   PMID:24726056  
PMID:24840181   PMID:24848268   PMID:24887393   PMID:24911792   PMID:25001859   PMID:25200950   PMID:25230070   PMID:25416956   PMID:25550546   PMID:25593301   PMID:25658794   PMID:25717063  
PMID:25747479   PMID:25795378   PMID:25837251   PMID:25896326   PMID:25914268   PMID:25943033   PMID:26077800   PMID:26085683   PMID:26093091   PMID:26116271   PMID:26186194   PMID:26311851  
PMID:26439863   PMID:26446381   PMID:26512116   PMID:26573233   PMID:26840086   PMID:27091975   PMID:27095555   PMID:27232934   PMID:27259369   PMID:27322955   PMID:27349907   PMID:27411490  
PMID:27437576   PMID:27714815   PMID:27742621   PMID:27855370   PMID:27856600   PMID:27863402   PMID:28076333   PMID:28077173   PMID:28100392   PMID:28378740   PMID:28393401   PMID:28514442  
PMID:28522599   PMID:28745331   PMID:28801364   PMID:28968355   PMID:29042481   PMID:29180619   PMID:29321087   PMID:29367423   PMID:29463646   PMID:29748606   PMID:30056566   PMID:30097533  
PMID:30466764   PMID:30525058   PMID:30710089   PMID:30713045   PMID:30741466   PMID:30833751   PMID:30878596   PMID:30938231   PMID:30948266   PMID:31025548   PMID:31089204   PMID:31132784  
PMID:31359339   PMID:31409608   PMID:31493748   PMID:31495971   PMID:31522278   PMID:31534047   PMID:31712778   PMID:31861233   PMID:31995728   PMID:32043750   PMID:32064335   PMID:32082304  
PMID:32149101   PMID:32196807   PMID:32226539   PMID:32240171   PMID:32296041   PMID:32296183   PMID:32433947   PMID:32513696   PMID:32576628   PMID:32576895   PMID:32677994   PMID:32748759  
PMID:32807901   PMID:32814713   PMID:32830120   PMID:32923164   PMID:32929084   PMID:33001583   PMID:33084148   PMID:33389016   PMID:33406263   PMID:33429083   PMID:33582561   PMID:33765961  
PMID:33799989   PMID:33815356   PMID:33833053   PMID:33836556   PMID:33917174   PMID:33920030   PMID:33961781   PMID:33979899   PMID:33999416   PMID:34016744   PMID:34068752   PMID:34195295  
PMID:34203368   PMID:34282107   PMID:34425695   PMID:34454175   PMID:34471125   PMID:34512146   PMID:34559187   PMID:34654058   PMID:34670667   PMID:34846059   PMID:34858730   PMID:34940829  
PMID:34966389   PMID:34998671   PMID:35048182   PMID:35084991   PMID:35156226   PMID:35234315   PMID:35301709   PMID:35317832   PMID:35475881   PMID:35611464   PMID:35696571   PMID:35703112  
PMID:35795660   PMID:35869130   PMID:35981350   PMID:35981364   PMID:36031743   PMID:36080360   PMID:36107309   PMID:36171566   PMID:36215168   PMID:36308193   PMID:36389667   PMID:36413402  
PMID:36435064   PMID:36459066   PMID:36598153   PMID:36791324   PMID:36796515   PMID:36898577   PMID:36918226   PMID:37248568   PMID:37368493   PMID:37499664   PMID:37532180   PMID:37616343  
PMID:37681453   PMID:37719086   PMID:37783914   PMID:37820008   PMID:37848444   PMID:38037074   PMID:38078465   PMID:38141516   PMID:38279488   PMID:38285791   PMID:38317230   PMID:38383737  


Genomics

Comparative Map Data
CD47
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383108,043,091 - 108,091,031 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3108,043,091 - 108,091,862 (-)EnsemblGRCh38hg38GRCh38
GRCh373107,761,938 - 107,809,878 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363109,244,631 - 109,292,625 (-)NCBINCBI36Build 36hg18NCBI36
Build 343109,244,836 - 109,292,592NCBI
Celera3106,158,598 - 106,206,555 (-)NCBICelera
Cytogenetic Map3q13.12NCBI
HuRef3105,135,236 - 105,183,196 (-)NCBIHuRef
CHM1_13107,726,104 - 107,774,070 (-)NCBICHM1_1
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBIT2T-CHM13v2.0
Cd47
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391649,671,691 - 49,732,799 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1649,620,896 - 49,735,373 (+)EnsemblGRCm39 Ensembl
GRCm381649,851,328 - 49,912,503 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1649,800,533 - 49,915,010 (+)EnsemblGRCm38mm10GRCm38
MGSCv371649,855,767 - 49,911,801 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361649,775,280 - 49,831,314 (+)NCBIMGSCv36mm8
Celera1650,198,659 - 50,254,756 (+)NCBICelera
Cytogenetic Map16B5NCBI
cM Map1631.23NCBI
Cd47
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81164,374,816 - 64,438,763 (-)NCBIGRCr8
mRatBN7.21150,906,052 - 50,970,000 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1150,906,177 - 50,969,425 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1159,678,059 - 59,738,347 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01152,339,783 - 52,400,067 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01151,467,423 - 51,527,814 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01153,511,485 - 53,575,754 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1153,514,595 - 53,575,175 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01156,677,247 - 56,739,505 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41152,098,355 - 52,158,169 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11152,155,955 - 52,215,758 (-)NCBI
Celera1150,551,511 - 50,611,556 (-)NCBICelera
Cytogenetic Map11q21NCBI
Cd47
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554278,704,519 - 8,740,962 (-)NCBIChiLan1.0ChiLan1.0
CD47
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22106,021,081 - 106,069,020 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13106,025,859 - 106,073,254 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03105,170,246 - 105,217,603 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13112,104,037 - 112,140,818 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3112,104,037 - 112,143,522 (-)Ensemblpanpan1.1panPan2
CD47
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.13313,315,984 - 13,362,971 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl3313,319,266 - 13,363,580 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha3313,425,087 - 13,468,588 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.03313,485,123 - 13,528,697 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl3313,481,404 - 13,528,744 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.13313,354,729 - 13,398,227 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.03313,420,284 - 13,463,780 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.03313,832,991 - 13,876,700 (-)NCBIUU_Cfam_GSD_1.0
LOC101967799
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602141,436,987 - 141,483,915 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366451,363,406 - 1,408,624 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CD47
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl13151,429,288 - 151,488,544 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.113151,427,933 - 151,488,064 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.213160,472,681 - 160,518,106 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CD47
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12272,702,236 - 72,749,344 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2272,702,324 - 72,751,887 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604193,741,579 - 93,790,134 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in CD47
10 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 3q13.11-13.13(chr3:103692220-109605902)x1 copy number loss See cases [RCV000050910] Chr3:103692220..109605902 [GRCh38]
Chr3:103411064..109324749 [GRCh37]
Chr3:104893754..110807439 [NCBI36]
Chr3:3q13.11-13.13
pathogenic
GRCh38/hg38 3q11.1-21.1(chr3:93886671-123216683)x1 copy number loss See cases [RCV000051543] Chr3:93886671..123216683 [GRCh38]
Chr3:93605515..122935530 [GRCh37]
Chr3:95088205..124418220 [NCBI36]
Chr3:3q11.1-21.1
pathogenic
GRCh38/hg38 3q13.11-13.31(chr3:104621220-116093884)x3 copy number gain See cases [RCV000051722] Chr3:104621220..116093884 [GRCh38]
Chr3:104340064..115812731 [GRCh37]
Chr3:105822754..117295421 [NCBI36]
Chr3:3q13.11-13.31
pathogenic
GRCh38/hg38 3q11.1-13.31(chr3:93819623-116887056)x1 copy number loss See cases [RCV000135320] Chr3:93819623..116887056 [GRCh38]
Chr3:93538467..116605903 [GRCh37]
Chr3:95021157..118088593 [NCBI36]
Chr3:3q11.1-13.31
pathogenic
GRCh38/hg38 3q13.11-29(chr3:103426882-198110178)x3 copy number gain See cases [RCV000134948] Chr3:103426882..198110178 [GRCh38]
Chr3:103145726..197837049 [GRCh37]
Chr3:104628416..199321446 [NCBI36]
Chr3:3q13.11-29
pathogenic
GRCh38/hg38 3q11.2-13.31(chr3:97795369-115663349)x1 copy number loss See cases [RCV000138186] Chr3:97795369..115663349 [GRCh38]
Chr3:97514213..115382196 [GRCh37]
Chr3:98996903..116864886 [NCBI36]
Chr3:3q11.2-13.31
pathogenic|uncertain significance
GRCh38/hg38 3q13.11-13.13(chr3:106451492-109265496)x1 copy number loss See cases [RCV000139226] Chr3:106451492..109265496 [GRCh38]
Chr3:106170339..108984343 [GRCh37]
Chr3:107653029..110467033 [NCBI36]
Chr3:3q13.11-13.13
pathogenic
GRCh38/hg38 3q11.1-24(chr3:93800620-145695381)x3 copy number gain See cases [RCV000142340] Chr3:93800620..145695381 [GRCh38]
Chr3:93519464..145413168 [GRCh37]
Chr3:95002154..146895858 [NCBI36]
Chr3:3q11.1-24
pathogenic
GRCh37/hg19 3q13.11-13.32(chr3:105094834-117441953)x1 copy number loss See cases [RCV000448410] Chr3:105094834..117441953 [GRCh37]
Chr3:3q13.11-13.32
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986) copy number gain See cases [RCV000512358] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61892-197851986)x3 copy number gain See cases [RCV000511055] Chr3:61892..197851986 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3q13.12-13.13(chr3:106706719-109171489)x1 copy number loss not provided [RCV000682288] Chr3:106706719..109171489 [GRCh37]
Chr3:3q13.12-13.13
uncertain significance
GRCh37/hg19 3q13.12-13.13(chr3:107548272-108187643)x1 copy number loss not provided [RCV000682289] Chr3:107548272..108187643 [GRCh37]
Chr3:3q13.12-13.13
uncertain significance
GRCh37/hg19 3p26.3-q29(chr3:60174-197948027)x3 copy number gain not provided [RCV000742133] Chr3:60174..197948027 [GRCh37]
Chr3:3p26.3-q29
pathogenic
GRCh37/hg19 3q12.2-13.13(chr3:100613996-108976446)x3 copy number gain not provided [RCV000742661] Chr3:100613996..108976446 [GRCh37]
Chr3:3q12.2-13.13
likely pathogenic
GRCh37/hg19 3p26.3-q29(chr3:61495-197838262)x3 copy number gain not provided [RCV000742138] Chr3:61495..197838262 [GRCh37]
Chr3:3p26.3-q29
pathogenic
NM_001777.4(CD47):c.263T>C (p.Val88Ala) single nucleotide variant Inborn genetic diseases [RCV003267827] Chr3:108080128 [GRCh38]
Chr3:107798975 [GRCh37]
Chr3:3q13.12
uncertain significance
NM_001777.4(CD47):c.956T>G (p.Met319Arg) single nucleotide variant Inborn genetic diseases [RCV003275058] Chr3:108049630 [GRCh38]
Chr3:107768477 [GRCh37]
Chr3:3q13.12
uncertain significance
NM_001777.4(CD47):c.947C>T (p.Ser316Leu) single nucleotide variant Inborn genetic diseases [RCV003253027] Chr3:108049639 [GRCh38]
Chr3:107768486 [GRCh37]
Chr3:3q13.12
uncertain significance
GRCh37/hg19 3q12.3-13.2(chr3:101812245-112174485)x1 copy number loss not provided [RCV001005458] Chr3:101812245..112174485 [GRCh37]
Chr3:3q12.3-13.2
pathogenic
NM_001777.4(CD47):c.382G>A (p.Glu128Lys) single nucleotide variant Inborn genetic diseases [RCV003255464] Chr3:108080009 [GRCh38]
Chr3:107798856 [GRCh37]
Chr3:3q13.12
uncertain significance
GRCh37/hg19 3q13.12-13.31(chr3:106598767-115704696) copy number loss Chromosome 3q13.31 deletion syndrome [RCV002280741] Chr3:106598767..115704696 [GRCh37]
Chr3:3q13.12-13.31
pathogenic
NM_001777.4(CD47):c.770G>A (p.Ser257Asn) single nucleotide variant Inborn genetic diseases [RCV003262675] Chr3:108058351 [GRCh38]
Chr3:107777198 [GRCh37]
Chr3:3q13.12
uncertain significance
GRCh37/hg19 3q13.12-13.31(chr3:107059705-115005256)x1 copy number loss not provided [RCV002472579] Chr3:107059705..115005256 [GRCh37]
Chr3:3q13.12-13.31
pathogenic
NM_001777.4(CD47):c.92C>T (p.Thr31Met) single nucleotide variant Inborn genetic diseases [RCV002739472] Chr3:108080299 [GRCh38]
Chr3:107799146 [GRCh37]
Chr3:3q13.12
uncertain significance
NM_001777.4(CD47):c.255A>T (p.Lys85Asn) single nucleotide variant Inborn genetic diseases [RCV002956523] Chr3:108080136 [GRCh38]
Chr3:107798983 [GRCh37]
Chr3:3q13.12
uncertain significance
NM_001777.4(CD47):c.533C>G (p.Ala178Gly) single nucleotide variant Inborn genetic diseases [RCV002678297] Chr3:108060810 [GRCh38]
Chr3:107779657 [GRCh37]
Chr3:3q13.12
uncertain significance
NM_001777.4(CD47):c.310G>A (p.Asp104Asn) single nucleotide variant Inborn genetic diseases [RCV002655491] Chr3:108080081 [GRCh38]
Chr3:107798928 [GRCh37]
Chr3:3q13.12
uncertain significance
GRCh38/hg38 3q11.1-21.2(chr3:93979547-124774010)x1 copy number loss Chromosome 3q13.31 deletion syndrome [RCV003327614] Chr3:93979547..124774010 [GRCh38]
Chr3:3q11.1-21.2
pathogenic
NM_001777.4(CD47):c.583A>C (p.Ile195Leu) single nucleotide variant Inborn genetic diseases [RCV003362497] Chr3:108060760 [GRCh38]
Chr3:107779607 [GRCh37]
Chr3:3q13.12
uncertain significance
GRCh37/hg19 3q13.12-13.13(chr3:106530324-108811014)x1 copy number loss not provided [RCV003485397] Chr3:106530324..108811014 [GRCh37]
Chr3:3q13.12-13.13
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1757
Count of miRNA genes:853
Interacting mature miRNAs:977
Transcripts:ENST00000355354, ENST00000361309, ENST00000398258, ENST00000471694, ENST00000517766
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-77187  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,807,576 - 107,807,704UniSTSGRCh37
Build 363109,290,266 - 109,290,394RGDNCBI36
Celera3106,204,196 - 106,204,324RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,180,837 - 105,180,965UniSTS
TNG Radiation Hybrid Map361414.0UniSTS
GeneMap99-GB4 RH Map3393.8UniSTS
Whitehead-RH Map3483.4UniSTS
NCBI RH Map3848.1UniSTS
SHGC-77177  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,763,073 - 107,763,213UniSTSGRCh37
Build 363109,245,763 - 109,245,903RGDNCBI36
Celera3106,159,730 - 106,159,870RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,136,368 - 105,136,508UniSTS
TNG Radiation Hybrid Map361395.0UniSTS
GeneMap99-GB4 RH Map3391.55UniSTS
NCBI RH Map3869.3UniSTS
D3S4214  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,762,846 - 107,762,981UniSTSGRCh37
Build 363109,245,536 - 109,245,671RGDNCBI36
Celera3106,159,503 - 106,159,638RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,136,141 - 105,136,276UniSTS
RH94184  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,763,776 - 107,763,897UniSTSGRCh37
Build 363109,246,466 - 109,246,587RGDNCBI36
Celera3106,160,408 - 106,160,529RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,137,053 - 105,137,174UniSTS
GeneMap99-GB4 RH Map3392.4UniSTS
RH121206  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,775,112 - 107,775,403UniSTSGRCh37
Build 363109,257,802 - 109,258,093RGDNCBI36
Celera3106,171,732 - 106,172,023RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,148,372 - 105,148,663UniSTS
TNG Radiation Hybrid Map361395.0UniSTS
CD47_2027  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,764,310 - 107,765,208UniSTSGRCh37
Build 363109,247,000 - 109,247,898RGDNCBI36
Celera3106,160,942 - 106,161,840RGD
HuRef3105,137,587 - 105,138,485UniSTS
SHGC-12537  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,765,950 - 107,766,125UniSTSGRCh37
Build 363109,248,640 - 109,248,815RGDNCBI36
Celera3106,162,582 - 106,162,757RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,139,227 - 105,139,402UniSTS
Whitehead-YAC Contig Map3 UniSTS
GeneMap99-G3 RH Map35194.0UniSTS
D3S4195  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,765,984 - 107,766,122UniSTSGRCh37
Build 363109,248,674 - 109,248,812RGDNCBI36
Celera3106,162,616 - 106,162,754RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,139,261 - 105,139,399UniSTS
GeneMap99-G3 RH Map35194.0UniSTS
RH78419  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,762,228 - 107,762,394UniSTSGRCh37
Build 363109,244,918 - 109,245,084RGDNCBI36
Celera3106,158,885 - 106,159,051RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,135,523 - 105,135,689UniSTS
GeneMap99-GB4 RH Map3393.8UniSTS
NCBI RH Map3848.1UniSTS
SHGC-77192  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,762,773 - 107,762,904UniSTSGRCh37
Build 363109,245,463 - 109,245,594RGDNCBI36
Celera3106,159,430 - 106,159,561RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,136,068 - 105,136,199UniSTS
TNG Radiation Hybrid Map361395.0UniSTS
GeneMap99-GB4 RH Map3395.5UniSTS
SHGC-77188  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,788,383 - 107,788,540UniSTSGRCh37
Build 363109,271,073 - 109,271,230RGDNCBI36
Celera3106,185,003 - 106,185,160RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,161,646 - 105,161,803UniSTS
TNG Radiation Hybrid Map361404.0UniSTS
GeneMap99-GB4 RH Map3394.49UniSTS
Whitehead-RH Map3483.9UniSTS
STS-Z25521  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,765,993 - 107,766,127UniSTSGRCh37
Build 363109,248,683 - 109,248,817RGDNCBI36
Celera3106,162,625 - 106,162,759RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,139,270 - 105,139,404UniSTS
GeneMap99-GB4 RH Map3395.61UniSTS
NCBI RH Map3860.9UniSTS
STS-X69398  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,765,992 - 107,766,127UniSTSGRCh37
Build 363109,248,682 - 109,248,817RGDNCBI36
Celera3106,162,624 - 106,162,759RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,139,269 - 105,139,404UniSTS
GeneMap99-GB4 RH Map3395.5UniSTS
RH78668  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh373107,764,537 - 107,764,666UniSTSGRCh37
Build 363109,247,227 - 109,247,356RGDNCBI36
Celera3106,161,169 - 106,161,298RGD
Cytogenetic Map3q13.1-q13.2UniSTS
HuRef3105,137,814 - 105,137,943UniSTS
GeneMap99-GB4 RH Map3395.94UniSTS
D8S2278  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map3p25.3-p24.1UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map10q11UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map12q21.31UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic MapXp22.1UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map2q37UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map4q34.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map2p23.1UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map12p12.3UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map14q22UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map13q11UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map4q31UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map15q15-q21.1UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map17q22-q23.2UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic Map12q14.3-q15UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map19q13.13UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map21q21.1UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1p13-p12UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map10q21.1UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map14q31UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map20p11.23-p11.21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p25.1-p23UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic MapXp21.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map12p13-p12UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q22UniSTS
Cytogenetic Map4p15.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p16.3UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map6q22.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map3p21-p12UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p22-p21.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q31.3UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q32-q33UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map14q23-q24.2UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map2p24-p21UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic MapXq25-q26UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map15q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map1q25.1-q25.2UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map4q32-q34UniSTS
Cytogenetic MapXq25-q26.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map20q11.22-q12UniSTS
Cytogenetic Map4q34.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q31.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map21q21.2UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map2q36.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map20p12UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map22q13.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map11p14UniSTS
Cytogenetic Map1p32.1UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3p13UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map8q23UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map4q31.3UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic MapXq13UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map16q12-q13UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map22qUniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic MapXp22.12-p22.11UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map8p22-p21.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map7q22-qterUniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS
D3S3910  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map3q13.1-q13.2UniSTS
GeneMap99-GB4 RH Map3395.94UniSTS
Whitehead-RH Map3483.4UniSTS
Whitehead-YAC Contig Map3 UniSTS
NCBI RH Map3848.1UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 16
Medium 2410 2252 1413 342 1644 185 3498 1042 3449 333 1422 1596 170 1161 2004 4
Low 28 739 311 280 307 278 859 1155 285 86 22 16 5 1 43 784 2 2
Below cutoff 1 1 1 1 1

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001382306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001777 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_198793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005247909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017007536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001740374 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001740375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002959610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002959611 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007095768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007095769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008486858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_241521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_241522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_924218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_924219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_924220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC012020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF540016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI701980 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK096670 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK124152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK289813 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL832675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC010016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC012884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC045593 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC053959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI753986 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT006907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BX640889 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CB995865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471052 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LN680437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X69398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z25521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000355354   ⟹   ENSP00000347512
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,043,091 - 108,091,025 (-)Ensembl
RefSeq Acc Id: ENST00000361309   ⟹   ENSP00000355361
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,043,091 - 108,091,031 (-)Ensembl
RefSeq Acc Id: ENST00000398258   ⟹   ENSP00000381309
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,047,079 - 108,058,361 (-)Ensembl
RefSeq Acc Id: ENST00000471694
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,043,298 - 108,054,739 (-)Ensembl
RefSeq Acc Id: ENST00000517766   ⟹   ENSP00000430843
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,047,079 - 108,059,532 (-)Ensembl
RefSeq Acc Id: ENST00000644850   ⟹   ENSP00000493750
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl3108,059,457 - 108,091,862 (-)Ensembl
RefSeq Acc Id: NM_001382306   ⟹   NP_001369235
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001777   ⟹   NP_001768
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
GRCh373107,761,941 - 107,809,935 (-)ENTREZGENE
GRCh373107,761,941 - 107,809,935 (-)NCBI
Build 363109,244,631 - 109,292,625 (-)NCBI Archive
HuRef3105,135,236 - 105,183,196 (-)ENTREZGENE
CHM1_13107,726,104 - 107,774,070 (-)NCBI
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
Sequence:
RefSeq Acc Id: NM_198793   ⟹   NP_942088
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
GRCh373107,761,941 - 107,809,935 (-)ENTREZGENE
GRCh373107,761,941 - 107,809,935 (-)NCBI
Build 363109,244,631 - 109,292,625 (-)NCBI Archive
HuRef3105,135,236 - 105,183,196 (-)ENTREZGENE
CHM1_13107,726,104 - 107,774,070 (-)NCBI
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005247909   ⟹   XP_005247966
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
Sequence:
RefSeq Acc Id: XM_054348478   ⟹   XP_054204453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
RefSeq Acc Id: XR_007095768
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,051,939 - 108,091,031 (-)NCBI
RefSeq Acc Id: XR_007095769
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,051,939 - 108,091,031 (-)NCBI
RefSeq Acc Id: XR_008486855
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
RefSeq Acc Id: XR_008486856
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03110,762,913 - 110,810,821 (-)NCBI
RefSeq Acc Id: XR_008486857
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03110,771,730 - 110,810,821 (-)NCBI
RefSeq Acc Id: XR_008486858
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.03110,771,730 - 110,810,821 (-)NCBI
RefSeq Acc Id: XR_241522
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
GRCh373107,761,941 - 107,809,935 (-)NCBI
Sequence:
RefSeq Acc Id: XR_924218
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,043,091 - 108,091,031 (-)NCBI
Sequence:
RefSeq Acc Id: NP_942088   ⟸   NM_198793
- Peptide Label: isoform 2 precursor
- UniProtKB: Q08722 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001768   ⟸   NM_001777
- Peptide Label: isoform 1 precursor
- UniProtKB: Q53Y71 (UniProtKB/Swiss-Prot),   D3DN59 (UniProtKB/Swiss-Prot),   A8K198 (UniProtKB/Swiss-Prot),   Q96A60 (UniProtKB/Swiss-Prot),   Q08722 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_005247966   ⟸   XM_005247909
- Peptide Label: isoform X1
- UniProtKB: A0A0A1TSG4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001369235   ⟸   NM_001382306
- Peptide Label: isoform 3 precursor
RefSeq Acc Id: ENSP00000381309   ⟸   ENST00000398258
RefSeq Acc Id: ENSP00000430843   ⟸   ENST00000517766
RefSeq Acc Id: ENSP00000355361   ⟸   ENST00000361309
RefSeq Acc Id: ENSP00000347512   ⟸   ENST00000355354
RefSeq Acc Id: ENSP00000493750   ⟸   ENST00000644850
RefSeq Acc Id: XP_054204453   ⟸   XM_054348478
- Peptide Label: isoform X1
- UniProtKB: A0A0A1TSG4 (UniProtKB/TrEMBL)
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q08722-F1-model_v2 AlphaFold Q08722 1-323 view protein structure

Promoters
RGD ID:6865172
Promoter ID:EPDNEW_H5751
Type:initiation region
Name:CD47_1
Description:CD47 molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5752  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,091,029 - 108,091,089EPDNEW
RGD ID:6865174
Promoter ID:EPDNEW_H5752
Type:multiple initiation site
Name:CD47_2
Description:CD47 molecule
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H5751  
Experiment Methods:Single-end sequencing.; Paired-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh383108,097,424 - 108,097,484EPDNEW
RGD ID:6800747
Promoter ID:HG_KWN:45778
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000102792
Position:
Human AssemblyChrPosition (strand)Source
Build 363109,254,851 - 109,255,351 (-)MPROMDB
RGD ID:6800746
Promoter ID:HG_KWN:45779
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lymphoblastoid
Transcripts:OTTHUMT00000102790
Position:
Human AssemblyChrPosition (strand)Source
Build 363109,259,951 - 109,260,451 (-)MPROMDB
RGD ID:6800748
Promoter ID:HG_KWN:45780
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:ENST00000361309,   ENST00000398257,   ENST00000398260,   NM_001777,   NM_198793,   UC003DWW.1
Position:
Human AssemblyChrPosition (strand)Source
Build 363109,292,456 - 109,293,107 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:1682 AgrOrtholog
COSMIC CD47 COSMIC
Ensembl Genes ENSG00000196776 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000355354 ENTREZGENE
  ENST00000355354.13 UniProtKB/Swiss-Prot
  ENST00000361309 ENTREZGENE
  ENST00000361309.6 UniProtKB/Swiss-Prot
  ENST00000398258.7 UniProtKB/TrEMBL
  ENST00000517766.5 UniProtKB/TrEMBL
  ENST00000644850.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000196776 GTEx
HGNC ID HGNC:1682 ENTREZGENE
Human Proteome Map CD47 Human Proteome Map
InterPro CD47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CD47_TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CD47_Vset UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IgV_CD47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:961 UniProtKB/Swiss-Prot
NCBI Gene 961 ENTREZGENE
OMIM 601028 OMIM
PANTHER LEUKOCYTE SURFACE ANTIGEN CD47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10613 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CD47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  V-set_CD47 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26222 PharmGKB
PROSITE IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0A1TSG4 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R8Y484_HUMAN UniProtKB/TrEMBL
  A8K198 ENTREZGENE
  CD47_HUMAN UniProtKB/Swiss-Prot
  D3DN59 ENTREZGENE
  H0YC40_HUMAN UniProtKB/TrEMBL
  H7BYS8_HUMAN UniProtKB/TrEMBL
  Q08722 ENTREZGENE
  Q53Y71 ENTREZGENE
  Q96A60 ENTREZGENE
UniProt Secondary A8K198 UniProtKB/Swiss-Prot
  D3DN59 UniProtKB/Swiss-Prot
  Q53Y71 UniProtKB/Swiss-Prot
  Q96A60 UniProtKB/Swiss-Prot