Cyp4f14 (cytochrome P450, family 4, subfamily f, polypeptide 14) - Rat Genome Database

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Gene: Cyp4f14 (cytochrome P450, family 4, subfamily f, polypeptide 14) Mus musculus
Analyze
Symbol: Cyp4f14
Name: cytochrome P450, family 4, subfamily f, polypeptide 14
RGD ID: 737265
MGI Page MGI
Description: Predicted to enable arachidonic acid binding activity; heme binding activity; and monooxygenase activity. Predicted to be involved in leukotriene B4 catabolic process and omega-hydroxylase P450 pathway. Predicted to be located in apical plasma membrane; cytoplasm; and intracellular membrane-bounded organelle. Is expressed in liver; nervous system; and testis. Human ortholog(s) of this gene implicated in colorectal adenocarcinoma. Orthologous to several human genes including CYP4F2 (cytochrome P450 family 4 subfamily F member 2).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 1300014O15Rik; AW108534; cyp4f-14; cytochrome P450 4F14; cytochrome P450, subfamily IVF, polypeptide 14 (leukotriene B4 omega hydroxylase); cytochrome P450-LTB-omega; leukotriene B4 omega hydroxylase; leukotriene-B4 20-monooxygenase 3; leukotriene-B4 omega-hydroxylase 3
RGD Orthologs
Human
Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391733,122,331 - 33,136,353 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1733,124,044 - 33,136,316 (-)EnsemblGRCm39 Ensembl
GRCm381732,903,357 - 32,917,376 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1732,905,070 - 32,917,342 (-)EnsemblGRCm38mm10GRCm38
MGSCv371733,042,015 - 33,054,023 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361732,643,488 - 32,655,496 (-)NCBIMGSCv36mm8
Celera1733,817,222 - 33,829,231 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
1H-pyrazole  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
4,4'-sulfonyldiphenol  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
avobenzone  (ISO)
azoxystrobin  (ISO)
barium sulfate  (ISO)
benzo[a]pyrene  (EXP,ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
buspirone  (ISO)
chlorpyrifos  (ISO)
choline  (EXP)
ciprofibrate  (EXP)
cisplatin  (ISO)
clofibrate  (EXP,ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
dextran sulfate  (EXP)
dibenzofurans  (EXP)
Dibutyl phosphate  (ISO)
doxorubicin  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
fipronil  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
genistein  (EXP,ISO)
glafenine  (ISO)
glyphosate  (ISO)
imidacloprid  (ISO)
indometacin  (ISO)
inulin  (EXP)
irinotecan  (ISO)
ketoconazole  (ISO)
L-methionine  (EXP)
lithocholic acid  (EXP)
methoxychlor  (ISO)
methylisothiazolinone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-nitrosodiethylamine  (EXP)
nefazodone  (ISO)
nickel atom  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
obeticholic acid  (ISO)
p-toluidine  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP)
phlorizin  (EXP)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
rotenone  (ISO)
senecionine  (ISO)
Senkirkine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (ISO)
sodium dodecyl sulfate  (ISO)
streptozocin  (EXP)
tamoxifen  (EXP)
tauroursodeoxycholic acid  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (EXP)
Theaflavin 3,3'-digallate  (EXP,ISO)
thiabendazole  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Renal localization, expression, and developmental regulation of P450 4F cytochromes in three substrains of spontaneously hypertensive rats. Kalsotra A, etal., Biochem Biophys Res Commun. 2005 Dec 9;338(1):423-31. Epub 2005 Aug 25.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
6. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
7. Mouse MP Annotation Import Pipeline RGD automated import pipeline
8. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. CYP4Fs Expression in Rat Brain Correlates with Changes in LTB(4) Levels after Traumatic Brain Injury. Wang Y, etal., J Neurotrauma. 2008 Oct 11.
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11185557   PMID:12477932   PMID:12745259   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073   PMID:21466787  
PMID:21873635   PMID:22160543   PMID:22323595   PMID:22665481   PMID:22969154   PMID:25209997   PMID:27626380   PMID:38355793  


Genomics

Comparative Map Data
Cyp4f14
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391733,122,331 - 33,136,353 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1733,124,044 - 33,136,316 (-)EnsemblGRCm39 Ensembl
GRCm381732,903,357 - 32,917,376 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1732,905,070 - 32,917,342 (-)EnsemblGRCm38mm10GRCm38
MGSCv371733,042,015 - 33,054,023 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361732,643,488 - 32,655,496 (-)NCBIMGSCv36mm8
Celera1733,817,222 - 33,829,231 (-)NCBICelera
Cytogenetic Map17B1NCBI
cM Map1717.98NCBI
CYP4F12
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381915,673,087 - 15,697,174 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1915,673,018 - 15,697,174 (+)EnsemblGRCh38hg38GRCh38
GRCh371915,783,897 - 15,807,984 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361915,644,886 - 15,668,984 (+)NCBINCBI36Build 36hg18NCBI36
Build 341915,644,917 - 15,668,984NCBI
Celera1915,680,803 - 15,704,255 (+)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1915,352,410 - 15,376,054 (+)NCBIHuRef
CHM1_11915,783,320 - 15,806,476 (+)NCBICHM1_1
T2T-CHM13v2.01915,798,486 - 15,822,059 (+)NCBIT2T-CHM13v2.0
Cyp4f1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8712,661,357 - 12,672,952 (-)NCBIGRCr8
mRatBN7.2712,010,850 - 12,022,497 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl712,010,852 - 12,022,046 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx714,812,767 - 14,823,988 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0716,690,173 - 16,701,390 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0714,561,760 - 14,572,976 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0715,179,472 - 15,191,113 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl715,179,467 - 15,190,796 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0715,338,346 - 15,349,540 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4713,589,662 - 13,600,856 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1713,589,661 - 13,600,856 (-)NCBI
Celera710,104,934 - 10,116,152 (-)NCBICelera
Cytogenetic Map7q11NCBI

Variants

.
Variants in Cyp4f14
369 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:309
Count of miRNA genes:132
Interacting mature miRNAs:160
Transcripts:ENSMUST00000054174, ENSMUST00000179434
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10045977Tir9_mtrypanosome infection response 9 (mouse)Not determined172787811943885114Mouse
26884379Skwq5_mskull length QTL 5, 5 week (mouse)173311897454107028Mouse
1302038Radpf1_mradiation pulmonary fibrosis 1 (mouse)Not determined171683545533819843Mouse
1300890Bhr3_mbronchial hyperresponsiveness 3 (mouse)Not determined17397489048866091Mouse
11075105Modc1_mmodifier of Odc1 (mouse)172771579245622654Mouse
1300995Fembrs4_mfemur breaking strength 4 (mouse)Not determined171506165249061760Mouse
15039348Nmrs37_mNAFLD-associated magnetic resonance shift 37 (mouse)172781520961815209Mouse
4141357Mrdq1_mmodifier of retinal degeneration QTL 1 (mouse)Not determined3098790348039703Mouse
1302152Skull25_mskull morphology 25 (mouse)Not determined171681972150819843Mouse
1302028Asbb3_mautoimmune susceptibility in C57BL/6J and BALB/c 3 (mouse)Not determined171087811944878219Mouse
15039354Nmrs36_mNAFLD-associated magnetic resonance shift 36 (mouse)171914502553145025Mouse
1300787Cd8mts5_mCD8 memory T cell subset 5 (mouse)Not determined17858491442585149Mouse
4141215Mnic1_mmacronutrient intake, carbohydrate 1 (mouse)Not determined485475245670266Mouse
1300914Pcir4_mperiosteal circumference 4 (mouse)Not determined171506165249061760Mouse
13452396Leusq3_mleucocytosis susceptibility QTL 3 (mouse)171746220851462345Mouse
13524847Asrq8a_macoustic startle response 8a (mouse)171264696146646961Mouse
13452399Leusq6_mleucocytosis susceptibility QTL 6 (mouse)171746220851462345Mouse
1300535Char3_mP. chabaudi malaria resistance QTL 3 (mouse)Not determined171746220851462345Mouse
4140955Plgr1_mplague resistance locus 1 (mouse)Not determined3103350065033630Mouse
1302070Tbbmd7_mtotal body bone mineral density 7 (mouse)Not determined171506165249061760Mouse
10412214Sxbq3_mSGC/Knj cross B6 QTL 3 (mouse)Not determined171746220851462345Mouse
10412083Sm2_msusceptibility to Schistosoma mansoni infection 2 (mouse)Not determined171702994351030078Mouse
10412204Bbaa29_mB.burgdorferi-associated arthritis 29 (mouse)Not determined172605118560051352Mouse
4141067Hbnr2_mHeligmosomoides bakeri nematode resistance 2 (mouse)Not determined1188597145886119Mouse
10043949Pbft7_mpercent body fat 7 (mouse)Not determined17689393640893936Mouse
12904946Tammq8_mtibialis anterior muscle mass QTL 8 (mouse)171245178746451787Mouse
10412198Sst5_msusceptibility to tuberculosis 5 (mouse)Not determined172507658355712970Mouse
4142342Lfnq4_mlung function QTL 4 (mouse)Not determined1120648439364059Mouse
10412196Bbaa28_mB.burgdorferi-associated arthritis 28 (mouse)Not determined172558491443976235Mouse
1301935Skull24_mskull morphology 24 (mouse)Not determined17858491442585149Mouse
1301331Lbw1_mlupus NZB x NZW 1 (mouse)Not determined171841835752420983Mouse
1301840Ssial4_msusceptibility to sialadenitiss 4 (mouse)Not determined171817541252178214Mouse
1300692Blmpf1_mbleomycin-induced pulmonary fibrosis 1 (mouse)Not determined173206165237644775Mouse
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined171008134086996400Mouse
1357789Kdnw3_mkidney weight 3 (mouse)Not determined17485475247885665Mouse
1300703Uvbi2_mUVB induced immunosuppression 2 (mouse)Not determined172862240662622654Mouse
11038694Pas19_mpulmonary adenoma susceptibility 19 (mouse)172971116434754437Mouse
1301056Pas2_mpulmonary adenoma susceptibility 2 (mouse)Not determined171842214152424327Mouse
1301454Eae5_msusceptibility to experimental allergic encephalomyelitis 5 (mouse)Not determined172461275058612864Mouse
14747010Mancz14_mmandible centroid size 14 (mouse)171199818445998184Mouse
1302005Loco2_mlocomotor activity 2 (mouse)Not determined172688497260885114Mouse
4141272Tfv1_mtotal food volume 1 (mouse)Not determined485475265637357Mouse
1300602Eye2_meye weight 2 (mouse)Not determined172650533741105037Mouse
25394538Skmw84_mskeletal muscle weight 84, TA (mouse)173266042635520036Mouse
10412276Leci2_mleukocyte endothelial cell interactions 2 (mouse)Not determined17334817537348299Mouse
1302140Wta4_mweight adult 4 (mouse)Not determined171681972150819843Mouse
1558758Kcal2_mkilocalorie 2 (mouse)Not determined172640101252911704Mouse
1300706Alan1_malloantigen response 1 (mouse)Not determined17485475246469702Mouse
1558886Lgth9_mbody length 9 (mouse)Not determined171506165249061760Mouse
4142150Stheal11_msoft tissue heal 11 (mouse)Not determined171228621183361768Mouse
11081168Tir7_mtrypanosome infection response 7 (mouse)171412337248123496Mouse
1300589Myaa2_mmodifier of Yaa 2 (mouse)Not determined173013255564132666Mouse

Markers in Region
AW108534  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381732,905,330 - 32,905,423UniSTSGRCm38
MGSCv371733,042,275 - 33,042,368UniSTSGRCm37
Celera1733,817,482 - 33,817,575UniSTS
Cytogenetic Map17B1UniSTS
Whitehead/MRC_RH17412.09UniSTS
Cyp4f14  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map17B1UniSTS
cM Map17 UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001204333 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204335 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001204336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001357788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_022434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030249973 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB037540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB037541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB037542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF233644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI047403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK005007 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018676 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC011228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY705215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466640 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT033772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CX200266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000054174   ⟹   ENSMUSP00000050478
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,124,044 - 33,136,074 (-)Ensembl
GRCm38.p6 Ensembl1732,905,070 - 32,917,100 (-)Ensembl
Ensembl Acc Id: ENSMUST00000179434   ⟹   ENSMUSP00000136139
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,124,045 - 33,136,316 (-)Ensembl
GRCm38.p6 Ensembl1732,905,071 - 32,917,342 (-)Ensembl
Ensembl Acc Id: ENSMUST00000234538   ⟹   ENSMUSP00000157156
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,128,284 - 33,136,277 (-)Ensembl
GRCm38.p6 Ensembl1732,909,310 - 32,917,303 (-)Ensembl
Ensembl Acc Id: ENSMUST00000234759   ⟹   ENSMUSP00000157036
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,124,047 - 33,136,303 (-)Ensembl
GRCm38.p6 Ensembl1732,905,073 - 32,917,329 (-)Ensembl
Ensembl Acc Id: ENSMUST00000234797   ⟹   ENSMUSP00000157346
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,130,459 - 33,136,316 (-)Ensembl
GRCm38.p6 Ensembl1732,911,485 - 32,917,342 (-)Ensembl
Ensembl Acc Id: ENSMUST00000235058   ⟹   ENSMUSP00000157006
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1733,124,044 - 33,136,302 (-)Ensembl
GRCm38.p6 Ensembl1732,905,070 - 32,917,328 (-)Ensembl
RefSeq Acc Id: NM_001204333   ⟹   NP_001191262
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,303 (-)NCBI
GRCm381732,905,070 - 32,917,329 (-)NCBI
Celera1733,817,222 - 33,829,495 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001204334   ⟹   NP_001191263
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,303 (-)NCBI
GRCm381732,905,070 - 32,917,329 (-)NCBI
Celera1733,817,222 - 33,829,495 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001204335   ⟹   NP_001191264
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,316 (-)NCBI
GRCm381732,905,070 - 32,917,342 (-)NCBI
Celera1733,817,222 - 33,829,495 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001204336   ⟹   NP_001191265
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,316 (-)NCBI
GRCm381732,905,070 - 32,917,342 (-)NCBI
Celera1733,817,222 - 33,829,495 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001357788   ⟹   NP_001344717
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,330 (-)NCBI
GRCm381732,905,070 - 32,917,356 (-)NCBI
Sequence:
RefSeq Acc Id: NM_022434   ⟹   NP_071879
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,124,044 - 33,136,061 (-)NCBI
GRCm381732,905,070 - 32,917,087 (-)NCBI
MGSCv371733,042,015 - 33,054,023 (-)RGD
Celera1733,817,222 - 33,829,495 (-)ENTREZGENE
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030249973   ⟹   XP_030105833
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391733,122,331 - 33,136,353 (-)NCBI
GRCm381732,903,357 - 32,917,376 (-)NCBI
Sequence:
RefSeq Acc Id: NP_071879   ⟸   NM_022434
- UniProtKB: Q52L93 (UniProtKB/Swiss-Prot),   Q9EP75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001191265   ⟸   NM_001204336
- UniProtKB: Q52L93 (UniProtKB/Swiss-Prot),   Q9EP75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001191264   ⟸   NM_001204335
- UniProtKB: Q52L93 (UniProtKB/Swiss-Prot),   Q9EP75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001191263   ⟸   NM_001204334
- UniProtKB: Q52L93 (UniProtKB/Swiss-Prot),   Q9EP75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001191262   ⟸   NM_001204333
- UniProtKB: Q52L93 (UniProtKB/Swiss-Prot),   Q9EP75 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030105833   ⟸   XM_030249973
- Peptide Label: isoform X1
- UniProtKB: Q9EP75 (UniProtKB/Swiss-Prot),   Q52L93 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: NP_001344717   ⟸   NM_001357788
- UniProtKB: Q9EP75 (UniProtKB/Swiss-Prot),   Q52L93 (UniProtKB/Swiss-Prot)
Ensembl Acc Id: ENSMUSP00000050478   ⟸   ENSMUST00000054174
Ensembl Acc Id: ENSMUSP00000136139   ⟸   ENSMUST00000179434
Ensembl Acc Id: ENSMUSP00000157006   ⟸   ENSMUST00000235058
Ensembl Acc Id: ENSMUSP00000157036   ⟸   ENSMUST00000234759
Ensembl Acc Id: ENSMUSP00000157346   ⟸   ENSMUST00000234797
Ensembl Acc Id: ENSMUSP00000157156   ⟸   ENSMUST00000234538

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EP75-F1-model_v2 AlphaFold Q9EP75 1-524 view protein structure

Promoters
RGD ID:13675544
Promoter ID:EPDNEW_M21921
Type:initiation region
Name:Cyp4f14_2
Description:Mus musculus cytochrome P450, family 4, subfamily f, polypeptide14 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21922  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381732,917,068 - 32,917,128EPDNEW
RGD ID:13675546
Promoter ID:EPDNEW_M21922
Type:single initiation site
Name:Cyp4f14_1
Description:Mus musculus cytochrome P450, family 4, subfamily f, polypeptide14 , transcript variant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M21921  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381732,917,329 - 32,917,389EPDNEW
RGD ID:6827967
Promoter ID:MM_KWN:23072
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:NM_022434,   UC008BXR.1,   UC008BXS.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361733,053,881 - 33,054,381 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1927669 AgrOrtholog
Ensembl Genes ENSMUSG00000024292 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000054174 ENTREZGENE
  ENSMUST00000054174.9 UniProtKB/Swiss-Prot
  ENSMUST00000179434 ENTREZGENE
  ENSMUST00000179434.8 UniProtKB/Swiss-Prot
  ENSMUST00000234538.2 UniProtKB/TrEMBL
  ENSMUST00000234759 ENTREZGENE
  ENSMUST00000234759.2 UniProtKB/Swiss-Prot
  ENSMUST00000234797.2 UniProtKB/TrEMBL
  ENSMUST00000235058 ENTREZGENE
  ENSMUST00000235058.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.630.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cyt_P450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cyt_P450_CS UniProtKB/Swiss-Prot
  Cyt_P450_E_grp-I UniProtKB/Swiss-Prot
  Cyt_P450_E_grp-II UniProtKB/TrEMBL
  Cyt_P450_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Cytochrome_P450_Monoox UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:64385 UniProtKB/Swiss-Prot
MGD MGI:1927669 ENTREZGENE
NCBI Gene 64385 ENTREZGENE
PANTHER CYTOCHROME P450 FAMILY 4 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  LEUKOTRIENE-B4 OMEGA-HYDROXYLASE 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam p450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cyp4f14 PhenoGen
PRINTS EP450I UniProtKB/Swiss-Prot
  EP450II UniProtKB/TrEMBL
  P450 UniProtKB/Swiss-Prot
PROSITE CYTOCHROME_P450 UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48264 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A3Q4EC89_MOUSE UniProtKB/TrEMBL
  A0A3Q4EHX3_MOUSE UniProtKB/TrEMBL
  CP4FE_MOUSE UniProtKB/Swiss-Prot
  Q52L93 ENTREZGENE
  Q9EP75 ENTREZGENE
  Q9ESS1_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q52L93 UniProtKB/Swiss-Prot