Junb (jun B proto-oncogene) - Rat Genome Database
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Gene: Junb (jun B proto-oncogene) Mus musculus
Analyze
Symbol: Junb
Name: jun B proto-oncogene
RGD ID: 737196
MGI Page MGI
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in several processes, including decidualization; embryo development; and osteoblast proliferation. Predicted to localize to nuclear chromatin; nucleoplasm; and transcription factor AP-1 complex. Is expressed in several structures, including early conceptus; eye; forebrain; genitourinary system; and heart. Used to study systemic lupus erythematosus. Orthologous to human JUNB (JunB proto-oncogene, AP-1 transcription factor subunit); PARTICIPATES IN interleukin-6 signaling pathway; INTERACTS WITH (S)-amphetamine; (S)-nicotine; 1,1-dichloroethene.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Jun-B oncogene; myD21; transcription factor jun-B
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,703,538 - 85,705,377 (-)NCBIGRCm39mm39
GRCm38884,976,909 - 84,978,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,976,910 - 84,978,718 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl884,974,484 - 84,978,718 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,500,811 - 87,502,617 (-)NCBIGRCm37mm9NCBIm37
MGSCv36887,867,037 - 87,868,853 (-)NCBImm8
Celera889,271,597 - 89,273,403 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.41NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-pilocarpine  (ISO)
(-)-citrinin  (ISO)
(6aR,11aS,11bR)-10-acetyl-11-hydroxy-7,7-dimethyl-2,6,6a,7,11a,11b-hexahydro-9H-pyrrolo[1',2':2,3]isoindolo[4,5,6-cd]indol-9-one  (ISO)
(R)-noradrenaline  (ISO)
(S)-amphetamine  (EXP,ISO)
(S)-nicotine  (EXP,ISO)
1,1-dichloroethene  (EXP)
1,2,4-trimethylbenzene  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-(5-isoquinolinesulfonyl)-2-methylpiperazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-di-tert-butyl-4-methylphenol  (EXP)
2-amino-2-deoxy-D-glucopyranose  (ISO)
2-butoxyethanol  (EXP)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxynon-2-enal  (ISO)
4-hydroxyphenyl retinamide  (EXP)
4-nitrotoluene  (EXP)
5-(2-methylpiperazine-1-sulfonyl)isoquinoline  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
8-OH-DPAT  (ISO)
acetylsalicylic acid  (ISO)
acrylamide  (EXP)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (ISO)
aldehydo-D-glucose  (EXP)
all-trans-retinoic acid  (EXP,ISO)
AM-251  (ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
antirheumatic drug  (ISO)
arachidonic acid  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
arsenous acid  (EXP,ISO)
atropine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
Benzoyl peroxide  (EXP)
beryllium sulfate  (EXP)
beta-D-glucosamine  (ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buta-1,3-diene  (EXP)
butyric acid  (ISO)
C60 fullerene  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (EXP,ISO)
Calcimycin  (EXP)
calcitriol  (ISO)
camostat  (EXP)
capecitabine  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
cefaloridine  (ISO)
chloroprene  (EXP)
chlorpyrifos  (ISO)
chromium(6+)  (ISO)
chrysene  (EXP)
ciguatoxin CTX1B  (EXP)
ciprofibrate  (EXP)
cisplatin  (ISO)
clofibrate  (EXP)
clozapine  (ISO)
cobalt dichloride  (ISO)
cocaine  (EXP,ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
coumestrol  (ISO)
crocidolite asbestos  (EXP,ISO)
curcumin  (ISO)
cyclosporin A  (EXP,ISO)
cylindrospermopsin  (ISO)
D-glucose  (EXP)
DDT  (ISO)
deoxynivalenol  (EXP)
dexamethasone  (EXP)
diarsenic trioxide  (EXP,ISO)
diazepam  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (EXP)
dichloromethane  (EXP)
dichromium trioxide  (ISO)
dieldrin  (ISO)
dioxygen  (EXP,ISO)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
Enterolactone  (ISO)
ethanol  (EXP)
fluoranthene  (EXP)
folic acid  (EXP)
formaldehyde  (ISO)
gamma-aminobutyric acid  (ISO)
gamma-linolenic acid  (ISO)
genistein  (EXP)
geraniol  (ISO)
glafenine  (ISO)
gliotoxin  (ISO)
glucose  (EXP)
glutathione  (EXP)
glycidol  (ISO)
haloperidol  (ISO)
hydrogen peroxide  (EXP,ISO)
indometacin  (ISO)
isoflavones  (ISO)
isoprenaline  (EXP,ISO)
kainic acid  (EXP,ISO)
lead diacetate  (ISO)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
lithium atom  (ISO)
lithium hydride  (ISO)
lithocholic acid  (EXP)
luteolin  (ISO)
mechlorethamine  (EXP,ISO)
mercury dichloride  (ISO)
metformin  (ISO)
methamphetamine  (ISO)
methylisothiazolinone  (ISO)
methylmercury chloride  (ISO)
methylseleninic acid  (ISO)
Mezerein  (EXP)
mifepristone  (EXP)
mono(2-ethylhexyl) phthalate  (EXP,ISO)
morphine  (EXP)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-[2-[4-(2-methoxyphenyl)-1-piperazinyl]ethyl]-N-(2-pyridinyl)cyclohexanecarboxamide  (ISO)
N-acetyl-L-cysteine  (EXP)
N-benzyloxycarbonyl-L-leucyl-L-leucyl-L-leucinal  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-methyl-N-nitrosourea  (ISO)
N-nitrosomorpholine  (ISO)
naphthalenes  (ISO)
neurotensin  (ISO)
nickel dichloride  (EXP,ISO)
nickel subsulfide  (EXP)
nickel sulfate  (EXP,ISO)
nicotine  (EXP,ISO)
nilotinib  (ISO)
nitric oxide  (ISO)
nitroprusside  (ISO)
O-methyleugenol  (EXP)
obeticholic acid  (ISO)
ochratoxin A  (ISO)
okadaic acid  (EXP)
organoselenium compound  (ISO)
orphenadrine  (ISO)
oxaliplatin  (ISO)
oxazepam  (EXP)
oxidopamine  (ISO)
ozone  (ISO)
p-chloromercuribenzoic acid  (ISO)
p-menthan-3-ol  (ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
pentachlorophenol  (EXP)
pentobarbital  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl isothiocyanate  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
phenylephrine  (ISO)
phlorizin  (EXP)
phorbol 13-acetate 12-myristate  (EXP,ISO)
phosgene  (EXP)
pirenzepine  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
potassium dichromate  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
quercetin  (ISO)
quinomethionate  (ISO)
quinpirole  (ISO)
reactive oxygen species  (ISO)
Rebamipide  (ISO)
reserpine  (ISO)
resveratrol  (ISO)
rotenone  (ISO)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
saccharin  (EXP)
SB 203580  (ISO)
SB 431542  (ISO)
SCH 23390  (ISO)
scopolamine  (ISO)
silicon dioxide  (EXP,ISO)
silver atom  (EXP)
silver(0)  (EXP)
simvastatin  (EXP)
SL-327  (EXP)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium dodecyl sulfate  (ISO)
Soman  (ISO)
sulfadimethoxine  (EXP)
tacrolimus hydrate  (EXP)
tamoxifen  (EXP)
Tesaglitazar  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thapsigargin  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
torcetrapib  (ISO)
tributylstannane  (ISO)
Tributyltin oxide  (EXP,ISO)
trichostatin A  (ISO)
troglitazone  (ISO)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (ISO)
trovafloxacin  (EXP)
tunicamycin  (EXP)
undecane  (ISO)
urethane  (EXP,ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zebularine  (ISO)
zinc atom  (ISO)
zinc dichloride  (EXP)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal blood vessel morphology  (IAGP)
abnormal bone ossification  (IAGP)
abnormal bone structure  (IAGP)
abnormal embryo size  (IEA)
abnormal embryo turning  (IEA)
abnormal epidermal layer morphology  (IAGP)
abnormal epidermal-dermal junction morphology  (IAGP)
abnormal forebrain development  (IEA)
abnormal glomerular capillary morphology  (IAGP)
abnormal hindbrain development  (IEA)
abnormal kidney morphology  (IAGP)
abnormal midbrain development  (IEA)
abnormal neural tube closure  (IEA)
abnormal neural tube morphology  (IEA)
abnormal osteoclast differentiation  (IAGP)
abnormal osteoclast morphology  (IAGP)
abnormal periosteum morphology  (IAGP)
abnormal skeleton development  (IAGP)
abnormal skeleton physiology  (IAGP)
abnormal skin morphology  (IAGP)
abnormal trabecular bone morphology  (IAGP)
albuminuria  (IAGP)
arthritis  (IAGP)
decreased bone mineral density  (IAGP)
decreased bone resorption  (IAGP)
decreased bone strength  (IAGP)
decreased compact bone thickness  (IAGP)
decreased osteoblast cell number  (IAGP)
decreased osteoclast cell number  (IAGP)
dermatitis  (IAGP)
embryonic lethality prior to tooth bud stage  (IEA)
glomerulonephritis  (IAGP)
hyperkeratosis  (IAGP)
increased anti-histone antibody level  (IAGP)
increased chronic myelocytic leukemia incidence  (IAGP)
increased circulating interleukin-6 level  (IAGP)
increased IgE level  (IAGP)
increased inflammatory response  (IAGP)
increased interleukin-6 secretion  (IAGP)
increased mesangial cell number  (IAGP)
increased plasma cell number  (IAGP)
increased renal glomerulus basement membrane thickness  (IAGP)
increased renal glomerulus lobularity  (IAGP)
increased susceptibility to systemic lupus erythematosus  (IAGP)
kidney atrophy  (IAGP)
parakeratosis  (IAGP)
podocyte foot process effacement  (IAGP)
premature death  (IAGP)
preweaning lethality, complete penetrance  (IEA)
psoriasis  (IAGP)
renal glomerular immunoglobulin deposits  (IAGP)
short tibia  (IAGP)
skin inflammation  (IAGP)
small kidney  (IAGP)
spontaneous skin ulceration  (IAGP)
thick epidermis  (IAGP)
thick skin  (IAGP)
tubulointerstitial nephritis  (IAGP)
References

Additional References at PubMed
PMID:1326990   PMID:1459456   PMID:1605850   PMID:1630451   PMID:1631061   PMID:1675193   PMID:1690380   PMID:1708123   PMID:1793595   PMID:1887331   PMID:2067848   PMID:2104845  
PMID:2108401   PMID:3142691   PMID:3422745   PMID:7600678   PMID:7700631   PMID:7759105   PMID:7877445   PMID:8036018   PMID:8108135   PMID:8197114   PMID:8364887   PMID:8530030  
PMID:8537375   PMID:8649810   PMID:8650001   PMID:8661125   PMID:8661708   PMID:8757326   PMID:8833158   PMID:8929530   PMID:9060410   PMID:9457687   PMID:9570957   PMID:9858769  
PMID:10022836   PMID:10087299   PMID:10349636   PMID:10352021   PMID:10441734   PMID:10501973   PMID:10501980   PMID:10788439   PMID:11013214   PMID:11042159   PMID:11076861   PMID:11163237  
PMID:11217851   PMID:11456449   PMID:11726656   PMID:11818961   PMID:11828324   PMID:11862466   PMID:11948401   PMID:12070012   PMID:12121977   PMID:12220541   PMID:12456639   PMID:12465884  
PMID:12466851   PMID:12477932   PMID:12882314   PMID:12904583   PMID:12907453   PMID:14576352   PMID:14610205   PMID:14769860   PMID:15187104   PMID:15308641   PMID:15358865   PMID:15489334  
PMID:15507213   PMID:15558021   PMID:15618518   PMID:15782199   PMID:15883646   PMID:16141072   PMID:16141073   PMID:16163348   PMID:16288200   PMID:16365389   PMID:16387660   PMID:16418780  
PMID:16439969   PMID:16602821   PMID:16699069   PMID:17041602   PMID:17158955   PMID:17255940   PMID:17297445   PMID:17341624   PMID:17392792   PMID:17429444   PMID:17543594   PMID:17681951  
PMID:17982078   PMID:18287559   PMID:18641637   PMID:18679426   PMID:18799693   PMID:18957199   PMID:18974875   PMID:19289495   PMID:19303854   PMID:19345332   PMID:19561194   PMID:19578362  
PMID:19587266   PMID:19816943   PMID:19918056   PMID:19933155   PMID:19995970   PMID:20059953   PMID:20200942   PMID:20211142   PMID:20300111   PMID:20412781   PMID:20551518   PMID:20599664  
PMID:20921137   PMID:20930145   PMID:21267068   PMID:21308778   PMID:21371435   PMID:21540289   PMID:21572431   PMID:21809421   PMID:21873635   PMID:22391036   PMID:22431517   PMID:22560297  
PMID:22983707   PMID:22992523   PMID:22992524   PMID:23213481   PMID:23475960   PMID:23749999   PMID:23850243   PMID:23921639   PMID:24027048   PMID:24131868   PMID:24136993   PMID:24200694  
PMID:24332034   PMID:24411941   PMID:24574341   PMID:24714204   PMID:25013898   PMID:25216727   PMID:25472994   PMID:25501661   PMID:25526087   PMID:25595785   PMID:25622904   PMID:25774663  
PMID:26178310   PMID:26206133   PMID:26416771   PMID:26496610   PMID:27089206   PMID:27147707   PMID:28096474   PMID:28355185   PMID:28424250   PMID:28555647   PMID:28824171   PMID:29234109  
PMID:29272704   PMID:30143626   PMID:30183689   PMID:30224386   PMID:30559442   PMID:31017652   PMID:31144288   PMID:31285535   PMID:31644908   PMID:32098917   PMID:32484435  


Genomics

Comparative Map Data
Junb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39885,703,538 - 85,705,377 (-)NCBIGRCm39mm39
GRCm38884,976,909 - 84,978,748 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl884,976,910 - 84,978,718 (-)EnsemblGRCm38mm10GRCm38
GRCm38.p6 Ensembl884,974,484 - 84,978,718 (-)EnsemblGRCm38mm10GRCm38
MGSCv37887,500,811 - 87,502,617 (-)NCBIGRCm37mm9NCBIm37
MGSCv36887,867,037 - 87,868,853 (-)NCBImm8
Celera889,271,597 - 89,273,403 (-)NCBICelera
Cytogenetic Map8C3NCBI
cM Map841.41NCBI
JUNB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1912,791,486 - 12,793,315 (+)EnsemblGRCh38hg38GRCh38
GRCh381912,791,486 - 12,793,315 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371912,902,310 - 12,904,125 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361912,763,310 - 12,765,125 (+)NCBINCBI36hg18NCBI36
Build 341912,763,309 - 12,765,124NCBI
Celera1912,792,018 - 12,793,833 (+)NCBI
Cytogenetic Map19p13.13NCBI
HuRef1912,474,046 - 12,475,861 (+)NCBIHuRef
CHM1_11912,902,786 - 12,904,601 (+)NCBICHM1_1
Junb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01926,092,972 - 26,094,756 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1926,092,974 - 26,094,756 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01937,068,595 - 37,070,379 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41924,831,536 - 24,833,320 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11924,836,361 - 24,838,144 (+)NCBI
Celera1922,733,824 - 22,735,608 (+)NCBICelera
Cytogenetic Map19q11NCBI
Junb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,876,793 - 31,877,836 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,876,508 - 31,878,289 (+)NCBIChiLan1.0ChiLan1.0
JUNB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11913,097,640 - 13,099,474 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1913,097,931 - 13,098,974 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01912,353,760 - 12,355,598 (+)NCBIMhudiblu_PPA_v0panPan3
JUNB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2049,359,399 - 49,360,442 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12049,358,904 - 49,360,746 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Junb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366591,890,786 - 1,892,619 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JUNB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl266,214,594 - 66,215,637 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1266,214,086 - 66,219,435 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2266,505,351 - 66,507,024 (+)NCBISscrofa10.2Sscrofa10.2susScr3
JUNB
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1611,479,108 - 11,480,942 (+)NCBI
ChlSab1.1 Ensembl611,479,407 - 11,480,450 (+)Ensembl
Junb
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624901402,969 - 404,741 (+)NCBI

Position Markers
PMC152658P5  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,977,714 - 84,978,211UniSTSGRCm38
MGSCv37887,501,613 - 87,502,110UniSTSGRCm37
Celera889,272,399 - 89,272,896UniSTS
Cytogenetic Map8C2-D1UniSTS
PMC302098P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38884,977,994 - 84,978,413UniSTSGRCm38
MGSCv37887,501,893 - 87,502,312UniSTSGRCm37
Celera889,272,679 - 89,273,098UniSTS
Cytogenetic Map8C2-D1UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse
1301766Desp1_mdespair 1 (mouse)Not determined884759576118759741Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:282
Count of miRNA genes:218
Interacting mature miRNAs:238
Transcripts:ENSMUST00000064922
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_008416 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC163703 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK141592 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145550 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150111 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150247 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150286 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156596 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160066 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK183005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC092302 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY515688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  J03236 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF017545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U20735 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X54332 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X56666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000064922   ⟹   ENSMUSP00000064680
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl884,976,910 - 84,978,718 (-)Ensembl
RefSeq Acc Id: NM_008416   ⟹   NP_032442
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39885,703,538 - 85,705,377 (-)NCBI
GRCm38884,976,909 - 84,978,748 (-)ENTREZGENE
MGSCv37887,500,811 - 87,502,617 (-)RGD
Celera889,271,594 - 89,273,433 (-)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032442   ⟸   NM_008416
- UniProtKB: P09450 (UniProtKB/Swiss-Prot),   Q569U6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000064680   ⟸   ENSMUST00000064922
Protein Domains
bZIP   Jun

Promoters
RGD ID:8667723
Promoter ID:EPDNEW_M11893
Type:multiple initiation site
Name:Junb_1
Description:Mus musculus jun B proto-oncogene , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38884,978,718 - 84,978,778EPDNEW
RGD ID:6843355
Promoter ID:MM_KWN:55123
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_008416,   UC009MOO.1,   UC009MOP.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36887,500,236 - 87,503,627 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96647 AgrOrtholog
Ensembl Genes ENSMUSG00000052837 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000064680 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000064922 ENTREZGENE, UniProtKB/Swiss-Prot
InterPro bZIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  JNK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  JunB UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Leuzip_Jun UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TF_DNA-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16477 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96647 ENTREZGENE
NCBI Gene 16477 ENTREZGENE
PANTHER PTHR11462:SF37 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam bZIP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Jun UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Junb PhenoGen
PRINTS LEUZIPPRJUN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE BZIP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BZIP_BASIC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART BRLZ UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47454 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.1167 ENTREZGENE
UniProt JUNB_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TXR4_MOUSE UniProtKB/TrEMBL
  Q3U0S8_MOUSE UniProtKB/TrEMBL
  Q3U2Y0_MOUSE UniProtKB/TrEMBL
  Q569U6 ENTREZGENE, UniProtKB/TrEMBL
UniProt Secondary Q8C2G9 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-26 Junb  jun B proto-oncogene    Jun-B oncogene  Symbol and/or name change 5135510 APPROVED