Bcar1 (breast cancer anti-estrogen resistance 1) - Rat Genome Database

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Gene: Bcar1 (breast cancer anti-estrogen resistance 1) Mus musculus
Analyze
Symbol: Bcar1
Name: breast cancer anti-estrogen resistance 1
RGD ID: 737122
MGI Page MGI
Description: Predicted to enable protein domain specific binding activity and protein kinase binding activity. Involved in G protein-coupled receptor signaling pathway and platelet-derived growth factor receptor signaling pathway. Acts upstream of or within cell migration. Located in several cellular components, including actin cytoskeleton; focal adhesion; and lamellipodium. Is expressed in several structures, including alimentary system; brain; eye; genitourinary system; and hemolymphoid system gland. Human ortholog(s) of this gene implicated in breast ductal carcinoma. Orthologous to human BCAR1 (BCAR1 scaffold protein, Cas family member); PARTICIPATES IN endothelin signaling pathway; ephrin - ephrin receptor bidirectional signaling axis; insulin-like growth factor signaling pathway; INTERACTS WITH 1,2-dimethylhydrazine; 1-octadec-9-enoylglycero-3-phosphate; 17beta-hydroxy-5alpha-androstan-3-one.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI385681; breast cancer anti-estrogen resistance protein 1; C; Cas; Cr; CRK-associated substrate; Crkas; p130; p130 Cas; p130cas; v-crk-associated tyrosine kinase substrate
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398112,437,106 - 112,470,481 (-)NCBIGRCm39mm39
GRCm39 Ensembl8112,437,106 - 112,470,441 (-)Ensembl
GRCm388111,710,474 - 111,743,849 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8111,710,474 - 111,743,809 (-)EnsemblGRCm38mm10GRCm38
MGSCv378114,234,374 - 114,267,709 (-)NCBIGRCm37mm9NCBIm37
MGSCv368114,597,147 - 114,630,482 (-)NCBImm8
Celera8115,938,849 - 115,972,131 (-)NCBICelera
Cytogenetic Map8E1NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(R)-mevalonic acid  (ISO)
1,2-dimethylhydrazine  (EXP)
1-octadec-9-enoylglycero-3-phosphate  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,3',4,4',5,5'-Heptachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2-methylcholine  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
acrylamide  (EXP)
afimoxifene  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (ISO)
antirheumatic drug  (ISO)
aristolochic acid  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
arsenite(3-)  (EXP)
arsenous acid  (ISO)
atropine  (ISO)
azathioprine  (ISO)
benzo[a]pyrene  (ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (ISO)
blebbistatin  (ISO)
butan-1-ol  (ISO)
C60 fullerene  (ISO)
carbon nanotube  (EXP)
celecoxib  (ISO)
choline  (EXP)
chromium(6+)  (ISO)
ciguatoxin CTX1B  (EXP)
cisplatin  (EXP,ISO)
clofibrate  (EXP)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
cyproconazole  (ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
flavonoids  (ISO)
folic acid  (EXP)
fulvestrant  (ISO)
genistein  (ISO)
gentamycin  (ISO)
hydrogen peroxide  (ISO)
L-methionine  (EXP)
lovastatin  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
ML-7  (ISO)
N-Vinyl-2-pyrrolidone  (ISO)
nickel sulfate  (EXP)
nimesulide  (ISO)
nitric oxide  (ISO)
oxotremorine M  (ISO)
ozone  (ISO)
paracetamol  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl caffeate  (ISO)
phenobarbital  (ISO)
phenylarsine oxide  (ISO)
phenylephrine  (ISO)
pirinixic acid  (EXP,ISO)
potassium chloride  (ISO)
quercetin  (ISO)
reactive oxygen species  (ISO)
retinyl acetate  (EXP)
sodium arsenate  (ISO)
sulindac sulfide  (ISO)
tamoxifen  (ISO)
tetrachloromethane  (ISO)
tetrahydropalmatine  (ISO)
troglitazone  (EXP)
tropan-3alpha-yl 3-hydroxy-2-phenylpropanoate  (ISO)
urethane  (ISO)
valproic acid  (ISO)
wortmannin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
actin cytoskeleton  (IDA)
cell junction  (IEA)
cell projection  (IEA)
cytoplasm  (IBA,ISO)
cytosol  (TAS)
focal adhesion  (IBA,IDA,ISO)
lamellipodium  (IDA)
membrane  (IMP)
plasma membrane  (IBA,ISO)
ruffle  (ISO)

Molecular Function

References

Additional References at PubMed
PMID:3654595   PMID:7479864   PMID:8978305   PMID:8999909   PMID:9032297   PMID:9038154   PMID:9083073   PMID:9418872   PMID:9556601   PMID:9729467   PMID:9988732   PMID:10349636  
PMID:10438950   PMID:10639512   PMID:10692442   PMID:10739664   PMID:10896938   PMID:10922068   PMID:11038351   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11278488   PMID:11787067  
PMID:11792571   PMID:11812786   PMID:11864995   PMID:11884618   PMID:12023880   PMID:12134157   PMID:12477932   PMID:12486027   PMID:12520002   PMID:14610273   PMID:14657239   PMID:14741371  
PMID:15034138   PMID:15121874   PMID:15226823   PMID:15273716   PMID:15592455   PMID:15728191   PMID:15782199   PMID:15793570   PMID:16105984   PMID:16132110   PMID:16141072   PMID:16141073  
PMID:16478788   PMID:16601135   PMID:16602821   PMID:16644720   PMID:16687575   PMID:16707485   PMID:16769879   PMID:16914515   PMID:17070019   PMID:17251438   PMID:17488714   PMID:17623670  
PMID:17786957   PMID:17875741   PMID:18233957   PMID:18319625   PMID:18321991   PMID:18603407   PMID:18799693   PMID:19126677   PMID:19542491   PMID:19822523   PMID:20055753   PMID:20442405  
PMID:20505116   PMID:20603213   PMID:20623582   PMID:20637038   PMID:20980600   PMID:21267068   PMID:21873635   PMID:21924239   PMID:21937722   PMID:22034875   PMID:22587391   PMID:22801373  
PMID:23325412   PMID:23526406   PMID:23974298   PMID:23975851   PMID:24210661   PMID:24284072   PMID:24472550   PMID:24559672   PMID:24586768   PMID:24952961   PMID:28406229   PMID:28808245  
PMID:28860193   PMID:29662228   PMID:30390666   PMID:30422386   PMID:30589943   PMID:31537808   PMID:31579816   PMID:31887784   PMID:32325033  


Genomics

Comparative Map Data
Bcar1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm398112,437,106 - 112,470,481 (-)NCBIGRCm39mm39
GRCm39 Ensembl8112,437,106 - 112,470,441 (-)Ensembl
GRCm388111,710,474 - 111,743,849 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl8111,710,474 - 111,743,809 (-)EnsemblGRCm38mm10GRCm38
MGSCv378114,234,374 - 114,267,709 (-)NCBIGRCm37mm9NCBIm37
MGSCv368114,597,147 - 114,630,482 (-)NCBImm8
Celera8115,938,849 - 115,972,131 (-)NCBICelera
Cytogenetic Map8E1NCBI
BCAR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1675,228,181 - 75,268,053 (-)EnsemblGRCh38hg38GRCh38
GRCh381675,228,181 - 75,268,007 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371675,262,079 - 75,301,905 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361673,820,429 - 73,843,004 (-)NCBINCBI36hg18NCBI36
Build 341673,820,429 - 73,843,004NCBI
Celera1659,556,476 - 59,596,268 (-)NCBI
Cytogenetic Map16q23.1NCBI
HuRef1661,013,718 - 61,052,474 (-)NCBIHuRef
CHM1_11676,675,047 - 76,714,069 (-)NCBICHM1_1
Bcar1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21939,679,218 - 39,713,952 (-)NCBImRatBN7.2
Rnor_6.0 Ensembl1943,932,554 - 43,955,783 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01943,932,543 - 43,967,452 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01954,739,915 - 54,774,486 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41941,646,190 - 41,669,234 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11941,651,070 - 41,674,115 (-)NCBI
Celera1939,039,406 - 39,062,496 (-)NCBICelera
Cytogenetic Map19q12NCBI
Bcar1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554842,227,337 - 2,260,565 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554842,223,306 - 2,258,444 (+)NCBIChiLan1.0ChiLan1.0
BCAR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11675,149,280 - 75,186,883 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1675,150,122 - 75,188,775 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01655,798,578 - 55,838,448 (-)NCBIMhudiblu_PPA_v0panPan3
BCAR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1575,463,906 - 75,499,557 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl575,463,926 - 75,512,476 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha575,439,949 - 75,476,374 (+)NCBI
ROS_Cfam_1.0575,819,916 - 75,856,356 (+)NCBI
UMICH_Zoey_3.1575,712,186 - 75,748,588 (+)NCBI
UNSW_CanFamBas_1.0575,547,221 - 75,583,635 (+)NCBI
UU_Cfam_GSD_1.0576,038,420 - 76,074,849 (+)NCBI
Bcar1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934935,556,294 - 35,594,421 (+)NCBI
SpeTri2.0NW_00493647523,994,130 - 24,032,829 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
BCAR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl612,367,758 - 12,404,822 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1612,369,332 - 12,404,822 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2612,225,439 - 12,247,561 (+)NCBISscrofa10.2Sscrofa10.2susScr3
BCAR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1560,709,409 - 60,749,071 (-)NCBI
ChlSab1.1 Ensembl560,707,006 - 60,732,882 (-)Ensembl
Vero_WHO_p1.0NW_02366604715,305,423 - 15,350,551 (+)NCBI
Bcar1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462474611,660,859 - 11,695,991 (+)NCBI

Position Markers
AI385681  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388111,710,652 - 111,710,749UniSTSGRCm38
MGSCv378114,234,552 - 114,234,649UniSTSGRCm37
Celera8115,939,027 - 115,939,124UniSTS
Cytogenetic Map8D3UniSTS
Whitehead/MRC_RH81327.76UniSTS
UniSTS:236003  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388111,710,655 - 111,710,750UniSTSGRCm38
MGSCv378114,234,555 - 114,234,650UniSTSGRCm37
Celera8115,939,030 - 115,939,125UniSTS
Cytogenetic Map8D3UniSTS
Bcar1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8D3UniSTS
Crkas  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm388111,710,793 - 111,710,947UniSTSGRCm38
MGSCv378114,234,693 - 114,234,847UniSTSGRCm37
Celera8115,939,168 - 115,939,322UniSTS
Cytogenetic Map8D3UniSTS
cM MapUN UniSTS
cM Map8 UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
36049783Arc3_mantibody response to CHIKV 3, day 7, FRNT50 (mouse)8108700000113100000Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse
10045619Heal14_mwound healing/regeneration 14 (mouse)Not determined885716921119717069Mouse
36049780Ars12_mantibody response to SARS-CoV 12, 4 days post-rechallenge, IgM (mouse)8108700000113100000Mouse
11532692Sluc38a_msusceptibility to lung cancer 38a (mouse)8104307238129401213Mouse
36049782Arc2_mantibody response to CHIKV 2, day 7, IgM (mouse)8108700000113100000Mouse
12880431Fgf23lq2_mFGF23 serum level QTL 2 (mouse)896900000129401213Mouse
11079194Tpnr6_mthermal pain response 6 (mouse)8110440000114230000Mouse
1301080Sluc9_msusceptibility to lung cancer 9 (mouse)Not determined899101792129401213Mouse
1300681Pgia22_mproteoglycan induced arthritis 22 (mouse)Not determined8101759576115298718Mouse
1301766Desp1_mdespair 1 (mouse)Not determined884759576118759741Mouse
27226796Scvln16_msacral vertebrae length 2, 16 week (mouse)889000000130800000Mouse
36049781Arc1_mantibody response to CHIKV 1, day 7, IgG (mouse)8108700000113100000Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1357494Obsty2_mobesity 2 (mouse)Not determined895518613129018580Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
10412274Leci1_mleukocyte endothelial cell interactions 1 (mouse)Not determined8109688333129401213Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
11532691Sluc38_msusceptibility to lung cancer 38 (mouse)8104307238129401213Mouse
12904938Edlmmq7_mextensor digitorum longus muscle mass QTL 7 (mouse)8110755016129401213Mouse
1301316Dntcs1_mdental caries susceptibility 1 (mouse)Not determined8102716921127055036Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301481Lith11_mlithogenic gene 11 (mouse)Not determined897836895129401213Mouse
4141435Fbtq3_mfemoral bone trait QTL 3 (mouse)Not determined8100238570129401213Mouse
35673316Ari3_mantibody response to influenza 3, day 15, IgM (mouse)8108700000113100000Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
11252141Fdr2_mfat response to dietary restriction 2 (mouse)897663894129401213Mouse
12904960Gmmq6_mgastrocnemius muscle mass QTL 6 (mouse)8110755016129401213Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
1302105Im1_mImmunoregulatory 1 (mouse)Not determined899101792129401213Mouse
10412273Fcd1_mfunctional capillary density 1 (mouse)Not determined8109688333129401213Mouse
14746994Manh65_mmandible shape 65 (mouse)8105762890129401213Mouse
1302049Heal1_mwound healing/regeneration 1 (mouse)Not determined885716921119717069Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1301253Skmw2_mskeletal muscle weight 2 (mouse)Not determined885716921119717069Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:148
Count of miRNA genes:138
Interacting mature miRNAs:139
Transcripts:ENSMUST00000166232
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001198839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009954 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC122364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK090315 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK138372 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159168 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159297 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166248 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167352 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167504 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK167717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK181700 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK184548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK187912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK197300 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK209685 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211816 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK213855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK214399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218354 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK220011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057578 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY733553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U28151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U48853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000166232   ⟹   ENSMUSP00000129584
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl8111,710,474 - 111,743,809 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212147
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl8111,719,392 - 111,732,105 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212349   ⟹   ENSMUSP00000148364
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl8111,710,477 - 111,732,136 (-)Ensembl
RefSeq Acc Id: NM_001198839   ⟹   NP_001185768
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398112,437,106 - 112,458,768 (-)NCBI
GRCm388111,710,474 - 111,732,136 (-)NCBI
Celera8115,938,849 - 115,972,171 (-)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009954   ⟹   NP_034084
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm398112,437,106 - 112,470,481 (-)NCBI
GRCm388111,710,474 - 111,743,849 (-)ENTREZGENE
MGSCv378114,234,374 - 114,267,709 (-)RGD
Celera8115,938,849 - 115,972,171 (-)ENTREZGENE
cM Map8 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034084   ⟸   NM_009954
- Peptide Label: isoform B
- UniProtKB: Q61140 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001185768   ⟸   NM_001198839
- Peptide Label: isoform A
- UniProtKB: Q61140 (UniProtKB/Swiss-Prot),   Q3TJP4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000129584   ⟸   ENSMUST00000166232
RefSeq Acc Id: ENSMUSP00000148364   ⟸   ENSMUST00000212349
Protein Domains
SH3

Promoters
RGD ID:8668325
Promoter ID:EPDNEW_M12193
Type:initiation region
Name:Bcar1_1
Description:Mus musculus breast cancer anti-estrogen resistance 1 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm388111,743,843 - 111,743,903EPDNEW
RGD ID:6842856
Promoter ID:MM_KWN:55789
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Kidney,   Liver,   Lung,   MEF_B6
Transcripts:UC009NMV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,240,031 - 114,241,117 (-)MPROMDB
RGD ID:6842851
Promoter ID:MM_KWN:55790
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   Lung
Transcripts:ENSMUST00000034433
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,244,781 - 114,245,282 (-)MPROMDB
RGD ID:6842853
Promoter ID:MM_KWN:55791
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver,   MEF_B6
Transcripts:ENSMUST00000109137
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,246,916 - 114,248,007 (-)MPROMDB
RGD ID:6842864
Promoter ID:MM_KWN:55792
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:UC009NMT.1,   UC009NMW.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,255,916 - 114,256,416 (-)MPROMDB
RGD ID:6849248
Promoter ID:MM_XEF:7245
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:MEF_B6
Transcripts:NM_001170714
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,266,856 - 114,267,356 (-)MPROMDB
RGD ID:6842855
Promoter ID:MM_KWN:55793
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   Liver,   Lung,   MEF_B4
Transcripts:NM_009954
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv368114,267,514 - 114,268,014 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108091 AgrOrtholog
Ensembl Genes ENSMUSG00000031955 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000129584 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000148364 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000166232 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000212349 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.120.830 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro BCAR1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  BCAR1_SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CAS_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CAS_fam UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Serine_rich_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Serine_rich_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:12927 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:108091 ENTREZGENE
NCBI Gene 12927 ENTREZGENE
PANTHER PTHR10654 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10654:SF15 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam CAS_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Serine_rich UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SH3_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB BCAR1 RGD
PhenoGen Bcar1 PhenoGen
PRINTS SH3DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART SH3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF50044 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt BCAR1_MOUSE UniProtKB/Swiss-Prot
  Q3TIT7_MOUSE UniProtKB/TrEMBL
  Q3TJB5_MOUSE UniProtKB/TrEMBL
  Q3TJP4 ENTREZGENE, UniProtKB/TrEMBL
  Q3TLY3_MOUSE UniProtKB/TrEMBL
  Q3TXP6_MOUSE UniProtKB/TrEMBL
  Q61140 ENTREZGENE
UniProt Secondary Q60869 UniProtKB/Swiss-Prot
  Q6PFF9 UniProtKB/Swiss-Prot