Acsl1 (acyl-CoA synthetase long-chain family member 1) - Rat Genome Database

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Gene: Acsl1 (acyl-CoA synthetase long-chain family member 1) Mus musculus
Analyze
Symbol: Acsl1
Name: acyl-CoA synthetase long-chain family member 1
RGD ID: 737089
MGI Page MGI
Description: Enables palmitoyl-CoA ligase activity and protein serine/threonine kinase activator activity. Involved in fatty acid biosynthetic process; linoleic acid metabolic process; and positive regulation of cold-induced thermogenesis. Acts upstream of or within adiponectin-activated signaling pathway. Located in mitochondrion. Is active in endoplasmic reticulum membrane and mitochondrial outer membrane. Is expressed in several structures, including alimentary system; central nervous system; metanephros; respiratory system; and sensory organ. Used to study cardiomyopathy. Orthologous to human ACSL1 (acyl-CoA synthetase long chain family member 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: Ac; Acas; Acas1; acetate-CoA ligase; acetyl-CoA synthetase; acetyl-Coenzyme A synthetase 1 (ADP forming); Acs; arachidonate--CoA ligase; Fac; Facl2; FACS; fatty acid Coenzyme A ligase, long chain 2; LACS 1; LACS1; long-chain acyl-CoA synthetase 1; long-chain-fatty-acid--CoA ligase 1; phytanate--CoA ligase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm18957  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39846,924,214 - 46,989,088 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl846,924,074 - 46,989,088 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38846,471,037 - 46,536,051 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl846,471,037 - 46,536,051 (+)Ensemblmm10GRCm38
MGSCv37847,556,396 - 47,621,404 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36847,969,859 - 48,034,867 (+)NCBIMGSCv36mm8
Celera849,153,706 - 49,218,586 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
cM Map826.36NCBI
JBrowse:




Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-dexrazoxane  (EXP)
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
(S)-nicotine  (ISO)
1,1-dichloroethene  (EXP)
1,2-dimethylhydrazine  (EXP)
1-chloro-2,4-dinitrobenzene  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (EXP,ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3-dimethoxynaphthalene-1,4-dione  (ISO)
2,4-dibromophenyl 2,4,5-tribromophenyl ether  (EXP)
2,4-dinitrotoluene  (ISO)
2,6-dimethoxyphenol  (ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3,3',5-triiodo-L-thyronine  (EXP)
3,3,4,4,5,5,6,6,7,7,8,8,9,9,10,10,10-heptadecafluoro-1-decanol  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
4-nitroquinoline N-oxide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
acrolein  (ISO)
aflatoxin B1  (ISO)
Aflatoxin B2 alpha  (ISO)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (ISO)
alpha-Zearalanol  (ISO)
ammonium chloride  (ISO)
antimony(0)  (ISO)
aristolochic acid A  (EXP,ISO)
Aroclor 1254  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atazanavir sulfate  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (EXP)
Benzo[b]fluorene  (ISO)
Benzo[k]fluoranthene  (EXP)
beta-D-glucosamine 6-sulfate  (EXP)
bexarotene  (ISO)
bezafibrate  (EXP,ISO)
bicalutamide  (ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol AF  (ISO)
Bisphenol B  (ISO)
bisphenol F  (ISO)
bromobenzene  (ISO)
butan-1-ol  (ISO)
cadmium atom  (EXP,ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chenodeoxycholic acid  (ISO)
chloroacetaldehyde  (ISO)
chloroform  (ISO)
chlorpyrifos  (EXP)
cholic acid  (ISO)
choline  (EXP)
chromium atom  (ISO)
cidofovir anhydrous  (ISO)
ciglitazone  (ISO)
ciprofibrate  (ISO)
cisplatin  (ISO)
clodronic acid  (ISO)
clofibrate  (EXP,ISO)
Clofop  (ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (EXP,ISO)
cyproconazole  (EXP)
D-glucose  (ISO)
dehydroepiandrosterone  (ISO)
deoxycholic acid  (ISO)
dexamethasone  (EXP,ISO)
Di-n-hexyl phthalate  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
dichlorine  (ISO)
dichloroacetic acid  (EXP)
diethylstilbestrol  (ISO)
diisononyl phthalate  (EXP)
dioscin  (EXP,ISO)
dioxygen  (EXP,ISO)
dipentyl phthalate  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
diquat  (EXP,ISO)
diuron  (ISO)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
endosulfan  (ISO)
entacapone  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
erythromycin estolate  (ISO)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
fenofibrate  (EXP,ISO)
fenoprofen  (ISO)
fentin chloride  (ISO)
fenvalerate  (ISO)
flutamide  (EXP,ISO)
fructose  (EXP)
fulvestrant  (ISO)
fumonisin B1  (EXP)
furan  (ISO)
furfural  (ISO)
gentamycin  (ISO)
glafenine  (ISO)
glucose  (ISO)
glycochenodeoxycholic acid  (ISO)
glycocholic acid  (ISO)
glycodeoxycholic acid  (ISO)
glyphosate  (EXP)
GW 7647  (ISO)
hexadecanoic acid  (ISO)
hydrogen peroxide  (ISO)
ibuprofen  (ISO)
ifosfamide  (ISO)
indometacin  (ISO)
inulin  (EXP)
iron atom  (ISO)
iron(0)  (ISO)
isoniazide  (ISO)
isoprenaline  (ISO)
ivermectin  (ISO)
lead diacetate  (ISO)
linalool  (EXP,ISO)
lipopolysaccharide  (ISO)
lithocholic acid  (EXP)
medroxyprogesterone acetate  (ISO)
menadione  (ISO)
mercury atom  (ISO)
mercury dibromide  (ISO)
mercury(0)  (ISO)
metformin  (ISO)
methoxyacetic acid  (ISO)
methyl methanesulfonate  (ISO)
Methylazoxymethanol acetate  (ISO)
methylmercury chloride  (ISO)
mitomycin C  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
Muraglitazar  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
nefazodone  (ISO)
nickel dichloride  (ISO)
niclosamide  (ISO)
nicotine  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
O-methyleugenol  (ISO)
obeticholic acid  (ISO)
ochratoxin A  (ISO)
okadaic acid  (ISO)
oleic acid  (ISO)
osthole  (ISO)
oxaliplatin  (ISO)
ozone  (EXP,ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perfluorobutanesulfonic acid  (EXP)
perfluorodecanoic acid  (ISO)
perfluoroheptanoic acid  (ISO)
perfluorohexanesulfonic acid  (EXP,ISO)
perfluorohexanoic acid  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
permethrin  (EXP)
phenobarbital  (ISO)
phenylmercury acetate  (ISO)
phlorizin  (EXP)
pirinixic acid  (EXP,ISO)
potassium dichromate  (ISO)
pravastatin  (EXP)
prednisolone  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP,ISO)
progesterone  (ISO)
promegestone  (ISO)
propiconazole  (EXP)
protein kinase inhibitor  (ISO)
raloxifene  (ISO)
rotenone  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
scopoletin  (ISO)
Senkirkine  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP,ISO)
sodium chloride  (ISO)
sodium dichromate  (ISO)
sodium fluoride  (EXP)
sulforaphane  (EXP,ISO)
sulindac  (ISO)
tamoxifen  (EXP,ISO)
Tanshinone I  (ISO)
tauroursodeoxycholic acid  (ISO)
temozolomide  (ISO)
Tesaglitazar  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
tetracycline  (EXP,ISO)
thioacetamide  (ISO)
thiram  (ISO)
titanium dioxide  (EXP)
tolcapone  (ISO)
toluene  (ISO)
topotecan  (ISO)
triacsin C  (ISO)
tributylstannane  (EXP)
trichloroethene  (EXP,ISO)
trichostatin A  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
triptonide  (EXP)
triticonazole  (ISO)
troglitazone  (EXP,ISO)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
zaragozic acid A  (EXP,ISO)
zinc atom  (EXP,ISO)
zinc(0)  (EXP,ISO)
zingerone  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
endoplasmic reticulum  (IBA,IEA,ISO,ISS)
endoplasmic reticulum membrane  (IDA,IEA)
membrane  (IBA,IEA)
mitochondrial outer membrane  (IDA,IEA,ISO,TAS)
mitochondrion  (HDA,IEA,ISO)
peroxisomal membrane  (IEA,ISO)
peroxisome  (IEA)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Fatty acid handling protein expression in adipose tissue, fatty acid composition of adipose tissue and serum, and markers of insulin resistance. Gertow K, etal., Eur J Clin Nutr. 2006 Dec;60(12):1406-13. Epub 2006 Jun 21.
2. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
4. MGDs mouse GO annotations MGD data from the GO Consortium
5. Integrated analysis of protein composition, tissue diversity, and gene regulation in mouse mitochondria. Mootha VK, etal., Cell 2003 Nov 26;115(5):629-40.
6. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
7. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
8. Mouse MP Annotation Import Pipeline RGD automated import pipeline
9. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
10. Effect of starvation on hepatic acyl-CoA synthetase, carnitine palmitoyltransferase-I, and acetyl-CoA carboxylase mRNA levels in rats. Ryu MH, etal., Nutrition. 2005 Apr;21(4):537-42.
11. Marked enhancement of acyl-CoA synthetase activity and mRNA, paralleled to lipoprotein lipase mRNA, in adipose tissues of Zucker obese rats (fa/fa). Shimomura I, etal., Biochim Biophys Acta. 1992 Mar 4;1124(2):112-8.
12. Evidence for 26 distinct acyl-coenzyme A synthetase genes in the human genome. Watkins PA, etal., J Lipid Res. 2007 Dec;48(12):2736-50. Epub 2007 Aug 30.
Additional References at PubMed
PMID:1684180   PMID:7954810   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12819125   PMID:14610273   PMID:14681479   PMID:15347805   PMID:15782199  
PMID:16141072   PMID:16141073   PMID:16357361   PMID:16916647   PMID:17197235   PMID:17198697   PMID:18554416   PMID:18614015   PMID:19429676   PMID:19459852   PMID:19648649   PMID:19834009  
PMID:20138838   PMID:20620995   PMID:20667975   PMID:21245374   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22020260   PMID:22308341   PMID:22445754   PMID:22794259   PMID:23153419  
PMID:23241406   PMID:23426369   PMID:24086110   PMID:24462768   PMID:24631848   PMID:25071025   PMID:25915184   PMID:26136511   PMID:26220174   PMID:26991015   PMID:26995156   PMID:27166947  
PMID:27659423   PMID:28130547   PMID:28324027   PMID:28364022   PMID:28378742   PMID:29199018   PMID:29222160   PMID:29622588   PMID:29688375   PMID:30158245   PMID:30190326   PMID:30550785  
PMID:30975900   PMID:31166619   PMID:32146873   PMID:32212902   PMID:32325033   PMID:32732898   PMID:33152322   PMID:33485846   PMID:34511469   PMID:34813948   PMID:34960652   PMID:35122795  
PMID:36054206   PMID:36349655   PMID:37225978   PMID:37815863   PMID:38016515   PMID:38040804   PMID:38196272   PMID:38245444   PMID:38376246   PMID:38503284   PMID:39134684   PMID:39178212  
PMID:39232011   PMID:39442449  


Genomics

Comparative Map Data
Acsl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39846,924,214 - 46,989,088 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl846,924,074 - 46,989,088 (+)EnsemblGRCm39 EnsemblGRCm39
GRCm38846,471,037 - 46,536,051 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl846,471,037 - 46,536,051 (+)Ensemblmm10GRCm38
MGSCv37847,556,396 - 47,621,404 (+)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36847,969,859 - 48,034,867 (+)NCBIMGSCv36mm8
Celera849,153,706 - 49,218,586 (+)NCBICelera
Cytogenetic Map8B1.1NCBI
cM Map826.36NCBI
ACSL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh384184,755,595 - 184,826,594 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl4184,755,595 - 184,826,818 (-)Ensemblhg38GRCh38
GRCh374185,676,749 - 185,747,122 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364185,913,743 - 185,984,209 (-)NCBIBuild 36Build 36hg18NCBI36
Build 344186,051,898 - 186,122,364NCBI
Celera4183,005,275 - 183,075,742 (-)NCBICelera
Cytogenetic Map4q35.1NCBI
HuRef4181,430,075 - 181,478,058 (-)NCBIHuRef
CHM1_14185,652,944 - 185,723,638 (-)NCBICHM1_1
T2T-CHM13v2.04188,099,036 - 188,170,021 (-)NCBIT2T-CHM13v2.0
Acsl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81652,487,870 - 52,554,110 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl1652,487,870 - 52,554,023 (-)EnsemblGRCr8
mRatBN7.21645,755,246 - 45,821,541 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1645,755,254 - 45,821,541 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx1651,154,126 - 51,196,774 (-)NCBIUTH_Rnor_SHR_UtxUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01654,521,461 - 54,565,831 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01649,793,500 - 49,836,154 (-)NCBIUTH_Rnor_WKY_Bbb_1.0UTH_Rnor_WKY_Bbb_1.0
Rnor_6.01648,937,456 - 49,003,898 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1648,937,456 - 49,003,246 (-)Ensemblrn6Rnor6.0
Rnor_5.01648,653,023 - 48,719,250 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.41649,036,892 - 49,081,416 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera1643,758,263 - 43,802,634 (-)NCBICelera
RGSC_v3.11649,036,966 - 49,081,491 (-)NCBI
Cytogenetic Map16q11NCBI
Acsl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540324,190,674 - 24,236,780 (+)Ensembl
ChiLan1.0NW_00495540324,190,674 - 24,235,354 (+)NCBIChiLan1.0ChiLan1.0
ACSL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v23182,479,288 - 182,550,746 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan14182,841,132 - 182,912,587 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v04176,920,811 - 176,991,495 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.14189,145,403 - 189,216,458 (-)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4189,145,403 - 189,198,646 (-)EnsemblpanPan2panpan1.1
ACSL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11645,735,675 - 45,806,235 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1645,735,703 - 45,804,970 (+)EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha1646,229,060 - 46,299,523 (+)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.01647,951,751 - 48,022,201 (+)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1647,951,663 - 48,216,959 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11645,918,792 - 45,989,322 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01646,531,804 - 46,602,185 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01646,664,118 - 46,734,659 (+)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Acsl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494333,625,129 - 33,684,355 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365544,425,495 - 4,484,887 (+)EnsemblSpeTri2.0 Ensembl
SpeTri2.0NW_0049365544,425,518 - 4,484,853 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACSL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1545,866,857 - 45,963,729 (-)EnsemblsusScr11Sscrofa11.1
Sscrofa11.11545,866,858 - 45,936,327 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21552,526,606 - 52,595,992 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ACSL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.17130,712,633 - 130,783,360 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl7130,712,308 - 130,763,756 (-)EnsemblChlSab1.1 EnsemblchlSab2Vervet-AGM
Vero_WHO_p1.0NW_023666037110,965,130 - 111,036,287 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acsl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476915,503,757 - 15,584,777 (-)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
HetGla 1.0NW_00462476915,503,757 - 15,584,741 (-)NCBIHetGla 1.0HetGla 1.0hetGla2

Variants

.
Variants in Acsl1
5825 total Variants
miRNA Target Status (No longer updated)

Predicted Target Of
Summary Value
Count of predictions:1581
Count of miRNA genes:669
Interacting mature miRNAs:826
Transcripts:ENSMUST00000034046, ENSMUST00000110371, ENSMUST00000110372, ENSMUST00000128746, ENSMUST00000130563, ENSMUST00000133161, ENSMUST00000135955, ENSMUST00000152423
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301139Lmr10_mleishmaniasis resistance 10 (mouse)Not determined83532109757797633Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81477316071498244Mouse
11049577Lmr10b_mleishmaniasis resistance 10b (mouse)83532109757797633Mouse
4141437W10q14_mweight 10 weeks QTL 14 (mouse)Not determined3250657271740637Mouse
11049578Lmr10c_mleishmaniasis resistance 10c (mouse)83532109757797633Mouse
11041902Lmr10a_mleishmaniasis resistance 10a (mouse)83532109757797633Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83663015493455280Mouse
4141172W6q9_mweight 6 weeks QTL 9 (mouse)Not determined3250657271740637Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined835109930115563747Mouse
10043990Hbnr12_mHeligmosomoides bakeri nematode resistance 12 (mouse)Not determined83327701651290537Mouse
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832506572117965439Mouse
4140966Egq12_mearly growth QTL 12 (mouse)Not determined3250657271740637Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837867154110326632Mouse
10043974Obq30_mobesity QTL 30 (mouse)Not determined82658332260583322Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81656937350569697Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81550657249506729Mouse
13524525Bodwtq7_mbody wweight QTL 7 (mouse)82824955647027681Mouse
1301936Trigq2_mtriglyceride QTL 2 (mouse)Not determined83429039768290537Mouse
1357811Orq3_movulation rate QTL 3 (mouse)Not determined83250657271740637Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81945501853455150Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)84016229795416226Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81550657249506729Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81945501853455150Mouse
1301544Iba3_minduction of brown adipocytes 3 (mouse)Not determined84474791478748059Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81832109752321225Mouse

Markers in Region
Acsl1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B2UniSTS
cM Map8 UniSTS
Acsl1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B2UniSTS
cM Map8 UniSTS
Acsl1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8B2UniSTS


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001302163 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424793 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001424794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007981 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509265 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509266 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017312563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243285 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934769 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119267 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC138367 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004897 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK149406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153050 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158388 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK168078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK180785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC056644 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY094311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY142492 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY393025 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY786934 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB881671 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC939080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U15977 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSMUST00000034046   ⟹   ENSMUSP00000034046
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,074 - 46,989,088 (+)Ensembl
GRCm38.p6 Ensembl846,471,037 - 46,536,051 (+)Ensembl
Ensembl Acc Id: ENSMUST00000110371   ⟹   ENSMUSP00000106000
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,945,869 - 46,987,517 (+)Ensembl
GRCm38.p6 Ensembl846,492,832 - 46,534,480 (+)Ensembl
Ensembl Acc Id: ENSMUST00000110372   ⟹   ENSMUSP00000106001
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,944,003 - 46,988,618 (+)Ensembl
GRCm38.p6 Ensembl846,490,966 - 46,535,581 (+)Ensembl
Ensembl Acc Id: ENSMUST00000128746
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,092 - 46,969,668 (+)Ensembl
GRCm38.p6 Ensembl846,471,055 - 46,516,631 (+)Ensembl
Ensembl Acc Id: ENSMUST00000130563   ⟹   ENSMUSP00000114473
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,944,011 - 46,958,749 (+)Ensembl
GRCm38.p6 Ensembl846,490,974 - 46,505,712 (+)Ensembl
Ensembl Acc Id: ENSMUST00000133161
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,979,823 - 46,981,689 (+)Ensembl
GRCm38.p6 Ensembl846,526,786 - 46,528,652 (+)Ensembl
Ensembl Acc Id: ENSMUST00000135955   ⟹   ENSMUSP00000117546
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,214 - 46,964,428 (+)Ensembl
GRCm38.p6 Ensembl846,471,177 - 46,511,391 (+)Ensembl
Ensembl Acc Id: ENSMUST00000152423   ⟹   ENSMUSP00000118845
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,984,101 - 46,987,492 (+)Ensembl
GRCm38.p6 Ensembl846,531,064 - 46,534,455 (+)Ensembl
Ensembl Acc Id: ENSMUST00000210929
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,220 - 46,987,721 (+)Ensembl
GRCm38.p6 Ensembl846,471,183 - 46,534,684 (+)Ensembl
Ensembl Acc Id: ENSMUST00000211289
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,214 - 46,925,466 (+)Ensembl
GRCm38.p6 Ensembl846,471,177 - 46,472,429 (+)Ensembl
Ensembl Acc Id: ENSMUST00000211644   ⟹   ENSMUSP00000147647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl846,924,109 - 46,964,432 (+)Ensembl
GRCm38.p6 Ensembl846,471,072 - 46,511,395 (+)Ensembl
RefSeq Acc Id: NM_001302163   ⟹   NP_001289092
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,944,171 - 46,989,088 (+)NCBI
GRCm38846,490,966 - 46,536,051 (+)NCBI
Celera849,153,701 - 49,218,587 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001424792   ⟹   NP_001411721
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,924,762 - 46,989,088 (+)NCBI
RefSeq Acc Id: NM_001424793   ⟹   NP_001411722
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,924,214 - 46,989,088 (+)NCBI
RefSeq Acc Id: NM_001424794   ⟹   NP_001411723
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,924,214 - 46,989,088 (+)NCBI
RefSeq Acc Id: NM_007981   ⟹   NP_032007
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,924,214 - 46,989,088 (+)NCBI
GRCm38846,471,037 - 46,536,051 (+)NCBI
MGSCv37847,556,396 - 47,621,404 (+)RGD
Celera849,153,701 - 49,218,587 (+)NCBI
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509262   ⟹   XP_006509325
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,945,420 - 46,989,088 (+)NCBI
GRCm38846,492,381 - 46,536,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509265   ⟹   XP_006509328
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,941,758 - 46,989,079 (+)NCBI
GRCm38846,488,726 - 46,536,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006509266   ⟹   XP_006509329
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,941,512 - 46,989,079 (+)NCBI
GRCm38846,488,562 - 46,536,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017312563   ⟹   XP_017168052
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,941,383 - 46,989,079 (+)NCBI
GRCm38846,488,346 - 46,536,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030243285   ⟹   XP_030099145
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,945,418 - 46,989,088 (+)NCBI
GRCm38846,492,379 - 46,536,051 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036153752   ⟹   XP_036009645
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,945,837 - 46,988,661 (+)NCBI
Sequence:
RefSeq Acc Id: XR_004934769
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39846,945,416 - 46,989,086 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001289092 (Get FASTA)   NCBI Sequence Viewer  
  NP_001411721 (Get FASTA)   NCBI Sequence Viewer  
  NP_001411722 (Get FASTA)   NCBI Sequence Viewer  
  NP_001411723 (Get FASTA)   NCBI Sequence Viewer  
  NP_032007 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509325 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509328 (Get FASTA)   NCBI Sequence Viewer  
  XP_006509329 (Get FASTA)   NCBI Sequence Viewer  
  XP_017168052 (Get FASTA)   NCBI Sequence Viewer  
  XP_030099145 (Get FASTA)   NCBI Sequence Viewer  
  XP_036009645 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA52193 (Get FASTA)   NCBI Sequence Viewer  
  AAH56644 (Get FASTA)   NCBI Sequence Viewer  
  BAB23652 (Get FASTA)   NCBI Sequence Viewer  
  BAE26736 (Get FASTA)   NCBI Sequence Viewer  
  BAE28854 (Get FASTA)   NCBI Sequence Viewer  
  BAE31484 (Get FASTA)   NCBI Sequence Viewer  
  BAE31678 (Get FASTA)   NCBI Sequence Viewer  
  BAE36230 (Get FASTA)   NCBI Sequence Viewer  
  BAE40051 (Get FASTA)   NCBI Sequence Viewer  
  CBF65114 (Get FASTA)   NCBI Sequence Viewer  
  CBU89985 (Get FASTA)   NCBI Sequence Viewer  
  EDL35573 (Get FASTA)   NCBI Sequence Viewer  
  EDL35574 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000034046
  ENSMUSP00000034046.6
  ENSMUSP00000106000
  ENSMUSP00000106001
  ENSMUSP00000106001.2
GenBank Protein P41216 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_032007   ⟸   NM_007981
- Peptide Label: isoform 1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509329   ⟸   XM_006509266
- Peptide Label: isoform X1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509328   ⟸   XM_006509265
- Peptide Label: isoform X1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006509325   ⟸   XM_006509262
- Peptide Label: isoform X1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001289092   ⟸   NM_001302163
- Peptide Label: isoform 1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017168052   ⟸   XM_017312563
- Peptide Label: isoform X1
- UniProtKB: Q6GTG6 (UniProtKB/Swiss-Prot),   Q9DBK5 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030099145   ⟸   XM_030243285
- Peptide Label: isoform X3
- UniProtKB: D3Z041 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSMUSP00000114473   ⟸   ENSMUST00000130563
Ensembl Acc Id: ENSMUSP00000106000   ⟸   ENSMUST00000110371
Ensembl Acc Id: ENSMUSP00000106001   ⟸   ENSMUST00000110372
Ensembl Acc Id: ENSMUSP00000147647   ⟸   ENSMUST00000211644
Ensembl Acc Id: ENSMUSP00000034046   ⟸   ENSMUST00000034046
Ensembl Acc Id: ENSMUSP00000118845   ⟸   ENSMUST00000152423
Ensembl Acc Id: ENSMUSP00000117546   ⟸   ENSMUST00000135955
RefSeq Acc Id: XP_036009645   ⟸   XM_036153752
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001411722   ⟸   NM_001424793
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001411723   ⟸   NM_001424794
- Peptide Label: isoform 3
RefSeq Acc Id: NP_001411721   ⟸   NM_001424792
- Peptide Label: isoform 1
- UniProtKB: Q9DBK5 (UniProtKB/Swiss-Prot),   Q6GTG6 (UniProtKB/Swiss-Prot),   P41216 (UniProtKB/Swiss-Prot)
Protein Domains
AMP-dependent synthetase/ligase

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P41216-F1-model_v2 AlphaFold P41216 1-699 view protein structure

Promoters
RGD ID:8667041
Promoter ID:EPDNEW_M11546
Type:initiation region
Name:Acsl1_1
Description:Mus musculus acyl-CoA synthetase long-chain family member 1 ,transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38846,471,177 - 46,471,237EPDNEW
RGD ID:6842689
Promoter ID:MM_KWN:54345
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   Spleen
Transcripts:OTTMUST00000054312,   OTTMUST00000054314,   OTTMUST00000054318
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,555,646 - 47,556,832 (+)MPROMDB
RGD ID:6842690
Promoter ID:MM_KWN:54346
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:OTTMUST00000054317,   UC009LQF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,575,656 - 47,576,707 (+)MPROMDB
RGD ID:6842687
Promoter ID:MM_KWN:54347
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:ENSMUST00000110371
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,577,441 - 47,578,487 (+)MPROMDB
RGD ID:6848246
Promoter ID:MM_ACW:47477
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Lung
Transcripts:ACSL1.FSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,598,551 - 47,599,062 (+)MPROMDB
RGD ID:6848245
Promoter ID:MM_ACW:47479
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:ACSL1.CSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,609,011 - 47,610,187 (+)MPROMDB
RGD ID:6842691
Promoter ID:MM_KWN:54348
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:OTTMUST00000054319
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,611,161 - 47,612,487 (+)MPROMDB
RGD ID:6842688
Promoter ID:MM_KWN:54349
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:OTTMUST00000054315
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,615,641 - 47,616,707 (+)MPROMDB
RGD ID:6848247
Promoter ID:MM_ACW:47480
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver
Transcripts:ACSL1.LSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36847,616,951 - 47,618,082 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:102797 AgrOrtholog
Ensembl Genes ENSMUSG00000018796 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034046 ENTREZGENE
  ENSMUST00000034046.13 UniProtKB/Swiss-Prot
  ENSMUST00000110371 ENTREZGENE
  ENSMUST00000110372 ENTREZGENE
  ENSMUST00000110372.9 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.12780 UniProtKB/Swiss-Prot
InterPro AMP-binding_CS UniProtKB/Swiss-Prot
  AMP-dep_Synth/Lig UniProtKB/Swiss-Prot
  ANL_N_sf UniProtKB/Swiss-Prot
  LC-FACS_euk UniProtKB/Swiss-Prot
KEGG Report mmu:14081 UniProtKB/Swiss-Prot
MGD MGI:102797 ENTREZGENE
NCBI Gene 14081 ENTREZGENE
PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE UniProtKB/Swiss-Prot
  LONG-CHAIN-FATTY-ACID--COA LIGASE 1 UniProtKB/Swiss-Prot
Pfam AMP-binding UniProtKB/Swiss-Prot
PhenoGen Acsl1 PhenoGen
PROSITE AMP_BINDING UniProtKB/Swiss-Prot
Superfamily-SCOP Acetyl-CoA synthetase-like UniProtKB/Swiss-Prot
UniProt A0A1B0GRS8_MOUSE UniProtKB/TrEMBL
  ACSL1_MOUSE UniProtKB/Swiss-Prot
  D3YVF6_MOUSE UniProtKB/TrEMBL
  D3Z041 ENTREZGENE, UniProtKB/TrEMBL
  D3Z457_MOUSE UniProtKB/TrEMBL
  F6WNZ2_MOUSE UniProtKB/TrEMBL
  P41216 ENTREZGENE
  Q6GTG6 ENTREZGENE
  Q9DBK5 ENTREZGENE
UniProt Secondary Q6GTG6 UniProtKB/Swiss-Prot
  Q9DBK5 UniProtKB/Swiss-Prot