Slco2a1 (solute carrier organic anion transporter family, member 2a1) - Rat Genome Database

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Gene: Slco2a1 (solute carrier organic anion transporter family, member 2a1) Mus musculus
Analyze
Symbol: Slco2a1
Name: solute carrier organic anion transporter family, member 2a1
RGD ID: 736967
MGI Page MGI
Description: Enables prostaglandin transmembrane transporter activity. Acts upstream of or within prostaglandin transport. Predicted to be located in basal plasma membrane. Predicted to be active in basolateral plasma membrane. Is expressed in several structures, including ganglia; nose; renal cortex; respiratory system; and skin. Human ortholog(s) of this gene implicated in primary hypertrophic osteoarthropathy. Orthologous to human SLCO2A1 (solute carrier organic anion transporter family member 2A1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 2310021C19Rik; mPg; mPgt; OATP2A1; Pg; Pgt; PHOAR2; prostaglandin transporter; Slc2; Slc21a2; solute carrier family 21 (prostaglandin transporter), member 2; solute carrier family 21 member 2; solute carrier organic anion transporter family member 2A1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399102,885,686 - 102,973,201 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9102,865,911 - 102,973,201 (+)EnsemblGRCm39 Ensembl
GRCm389103,007,061 - 103,096,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9102,988,712 - 103,096,002 (+)EnsemblGRCm38mm10GRCm38
MGSCv379102,910,819 - 102,990,179 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369102,866,770 - 102,944,916 (+)NCBIMGSCv36mm8
Celera9102,558,775 - 102,638,236 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map954.72NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(S)-nicotine  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,2-dimethylhydrazine  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2-methoxyethanol  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (EXP)
5-aza-2'-deoxycytidine  (ISO)
5-fluorouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
antirheumatic drug  (ISO)
aristolochic acid A  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
atrazine  (ISO)
Benoxacor  (EXP)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
bleomycin A2  (EXP)
Butylbenzyl phthalate  (EXP)
C60 fullerene  (ISO)
chlordecone  (EXP)
chloroprene  (EXP)
chromium(6+)  (EXP)
ciprofibrate  (EXP)
clofibrate  (EXP)
cyclosporin A  (ISO)
dexamethasone  (EXP)
diazinon  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
diethyl maleate  (ISO)
diethyl phthalate  (EXP)
diisobutyl phthalate  (EXP)
diisononyl phthalate  (EXP)
endosulfan  (ISO)
ethylparaben  (ISO)
flutamide  (ISO)
furan  (ISO)
genistein  (EXP,ISO)
indometacin  (ISO)
ketoprofen  (ISO)
lead diacetate  (ISO)
lumiracoxib  (ISO)
methotrexate  (ISO)
methoxychlor  (ISO)
methylmercury chloride  (ISO)
mifepristone  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-ethyl-N-nitrosourea  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
naproxen  (ISO)
nefazodone  (ISO)
nicotine  (ISO)
nimesulide  (ISO)
ozone  (ISO)
paracetamol  (EXP)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
phenobarbital  (EXP,ISO)
pirinixic acid  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
progesterone  (EXP,ISO)
prostaglandin E2  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
rifampicin  (ISO)
sodium arsenite  (EXP,ISO)
sodium fluoride  (EXP)
spironolactone  (EXP)
sulforaphane  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
trichloroethene  (EXP)
triclosan  (ISO)
Triptolide  (ISO)
triptonide  (EXP)
tunicamycin  (ISO)
valdecoxib  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zidovudine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10349636   PMID:10484490   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11134256   PMID:12477932   PMID:14610273   PMID:14681479   PMID:15489334   PMID:16141072   PMID:16141073  
PMID:17062627   PMID:17498705   PMID:18287559   PMID:18579702   PMID:18799693   PMID:20083684   PMID:21267068   PMID:21386911   PMID:21677750   PMID:21873635   PMID:22609345   PMID:25923111  
PMID:26073538   PMID:26121580   PMID:26474801   PMID:26692285   PMID:29046334   PMID:29185482   PMID:29899035   PMID:30728831   PMID:31467884   PMID:32184453   PMID:32408168   PMID:33141023  
PMID:34616075   PMID:35299026  


Genomics

Comparative Map Data
Slco2a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399102,885,686 - 102,973,201 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9102,865,911 - 102,973,201 (+)EnsemblGRCm39 Ensembl
GRCm389103,007,061 - 103,096,002 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9102,988,712 - 103,096,002 (+)EnsemblGRCm38mm10GRCm38
MGSCv379102,910,819 - 102,990,179 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369102,866,770 - 102,944,916 (+)NCBIMGSCv36mm8
Celera9102,558,775 - 102,638,236 (+)NCBICelera
Cytogenetic Map9F1NCBI
cM Map954.72NCBI
SLCO2A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383133,932,701 - 134,029,925 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3133,932,701 - 134,052,184 (-)EnsemblGRCh38hg38GRCh38
GRCh373133,651,545 - 133,748,769 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363135,134,230 - 135,231,418 (-)NCBINCBI36Build 36hg18NCBI36
Build 343135,134,239 - 135,231,426NCBI
Celera3132,077,395 - 132,174,290 (-)NCBICelera
Cytogenetic Map3q22.1-q22.2NCBI
HuRef3131,029,670 - 131,126,922 (-)NCBIHuRef
CHM1_13133,615,353 - 133,712,732 (-)NCBICHM1_1
T2T-CHM13v2.03136,677,860 - 136,775,063 (-)NCBIT2T-CHM13v2.0
Slco2a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88112,467,739 - 112,551,923 (+)NCBIGRCr8
mRatBN7.28103,588,916 - 103,672,546 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8103,588,916 - 103,672,546 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8109,252,126 - 109,332,029 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08107,451,296 - 107,531,195 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08105,293,972 - 105,373,875 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08111,495,443 - 111,577,320 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8111,495,331 - 111,577,833 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08110,886,314 - 110,968,548 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48108,012,829 - 108,098,561 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18108,032,283 - 108,118,016 (+)NCBI
Celera8102,966,792 - 103,051,202 (+)NCBICelera
Cytogenetic Map8q32NCBI
Slco2a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555014,543,194 - 4,625,715 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555014,544,065 - 4,623,615 (+)NCBIChiLan1.0ChiLan1.0
SLCO2A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22131,856,980 - 131,954,728 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13131,861,709 - 131,959,457 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03130,978,103 - 131,075,786 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13138,452,986 - 138,549,782 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3138,454,881 - 138,549,785 (-)Ensemblpanpan1.1panPan2
SLCO2A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12330,797,956 - 30,877,340 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2330,797,890 - 30,877,340 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2330,777,043 - 30,856,125 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02331,316,928 - 31,398,369 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2331,318,754 - 31,398,430 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12331,012,180 - 31,091,151 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02331,069,931 - 31,148,746 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02331,317,639 - 31,396,502 (-)NCBIUU_Cfam_GSD_1.0
Slco2a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560270,308,469 - 70,395,441 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365297,068,970 - 7,155,950 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365297,069,003 - 7,155,229 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SLCO2A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1375,106,607 - 75,190,022 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11375,108,540 - 75,189,660 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21382,607,281 - 82,614,511 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Sscrofa10.21382,682,287 - 82,806,558 (+)NCBISscrofa10.2Sscrofa10.2susScr3
SLCO2A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11556,339,585 - 56,427,196 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1556,339,744 - 56,430,032 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604129,322,188 - 29,409,777 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Slco2a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473010,256,799 - 10,339,827 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473010,256,799 - 10,339,388 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Slco2a1
3483 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:912
Count of miRNA genes:503
Interacting mature miRNAs:604
Transcripts:ENSMUST00000035148
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969121898103121973Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969428566103428698Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972859058106859205Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972859058106859205Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
1301484Bwq6_mbody weight (mouse)Not determined993591658124359700Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993591658124359700Mouse
14746992Manh67_mmandible shape 67 (mouse)993865836124359700Mouse
11081166Psl5_mpromotion susceptibility QTL 5 (mouse)994863354112701997Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996746658124359700Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9100889929124359700Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9101829255124359700Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9101829255124359700Mouse

Markers in Region
04.MMHAP88FRB7.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,008,336 - 103,008,501UniSTSGRCm38
MGSCv379102,910,666 - 102,910,831UniSTSGRCm37
Celera9102,558,622 - 102,558,787UniSTS
Cytogenetic Map9F1UniSTS
cM Map951.0UniSTS
Whitehead_YAC9 UniSTS
UniSTS:236237  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,087,538 - 103,087,755UniSTSGRCm38
MGSCv379102,989,868 - 102,990,085UniSTSGRCm37
Celera9102,637,925 - 102,638,142UniSTS
Cytogenetic Map9F1UniSTS
cM Map951.0UniSTS
D9Mgc15  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389103,015,892 - 103,016,165UniSTSGRCm38
MGSCv379102,918,222 - 102,918,495UniSTSGRCm37
Celera9102,566,179 - 102,566,452UniSTS
Cytogenetic Map9F1UniSTS
cM Map956.0UniSTS
Slco2a1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map9F1UniSTS
cM Map951.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_033314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_157194 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC156633 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC161262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF323958 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004616 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK009434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK030784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161748 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK166724 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC035200 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LXEJ02009108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000035148   ⟹   ENSMUSP00000035148
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9102,885,201 - 102,967,650 (+)Ensembl
GRCm38.p6 Ensembl9103,008,002 - 103,090,451 (+)Ensembl
RefSeq Acc Id: ENSMUST00000185215
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9102,865,911 - 102,897,974 (+)Ensembl
GRCm38.p6 Ensembl9102,988,712 - 103,020,775 (+)Ensembl
RefSeq Acc Id: ENSMUST00000188664   ⟹   ENSMUSP00000140533
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9102,885,698 - 102,973,201 (+)Ensembl
GRCm38.p6 Ensembl9103,008,499 - 103,096,002 (+)Ensembl
RefSeq Acc Id: ENSMUST00000190892
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl9102,885,353 - 102,889,106 (+)Ensembl
GRCm38.p6 Ensembl9103,008,154 - 103,011,907 (+)Ensembl
RefSeq Acc Id: NM_033314   ⟹   NP_201571
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399102,885,686 - 102,965,464 (+)NCBI
GRCm389103,008,487 - 103,088,265 (+)NCBI
MGSCv379102,910,819 - 102,990,179 (+)RGD
Celera9102,558,775 - 102,638,236 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_157194
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399102,885,686 - 102,973,201 (+)NCBI
GRCm389103,008,487 - 103,096,002 (+)NCBI
Sequence:
RefSeq Acc Id: NP_201571   ⟸   NM_033314
- UniProtKB: Q9EPT5 (UniProtKB/Swiss-Prot),   Q3TED0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000035148   ⟸   ENSMUST00000035148
RefSeq Acc Id: ENSMUSP00000140533   ⟸   ENSMUST00000188664
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9EPT5-F1-model_v2 AlphaFold Q9EPT5 1-643 view protein structure

Promoters
RGD ID:6845174
Promoter ID:MM_KWN:58572
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell,   Kidney,   Liver,   Lung
Transcripts:ENSMUST00000112818,   UC009RGD.1,   UC009RGE.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv369102,909,431 - 102,910,942 (+)MPROMDB
RGD ID:8670624
Promoter ID:EPDNEW_M13343
Type:multiple initiation site
Name:Slco2a1_1
Description:Mus musculus solute carrier organic anion transporter family,member 2a1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M13342  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm389103,008,491 - 103,008,551EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1346021 AgrOrtholog
Ensembl Genes ENSMUSG00000032548 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000035148 ENTREZGENE
  ENSMUST00000035148.13 UniProtKB/Swiss-Prot
  ENSMUST00000188664 ENTREZGENE
  ENSMUST00000188664.2 UniProtKB/Swiss-Prot
Gene3D-CATH 1.20.1250.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Kazal_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kazal_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS_trans_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:24059 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1346021 ENTREZGENE
NCBI Gene 24059 ENTREZGENE
PANTHER PTHR11388 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SOLUTE CARRIER ORGANIC ANION TRANSPORTER FAMILY MEMBER 2A1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Kazal_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  OATP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Slco2a1 PhenoGen
PROSITE KAZAL_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  MFS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF100895 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF103473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3TED0 ENTREZGENE, UniProtKB/TrEMBL
  Q9CQU9_MOUSE UniProtKB/TrEMBL
  Q9EPT5 ENTREZGENE, UniProtKB/Swiss-Prot