ST18 (ST18 C2H2C-type zinc finger transcription factor) - Rat Genome Database

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Gene: ST18 (ST18 C2H2C-type zinc finger transcription factor) Homo sapiens
Analyze
Symbol: ST18
Name: ST18 C2H2C-type zinc finger transcription factor
RGD ID: 736954
HGNC Page HGNC:18695
Description: Enables RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in cytokine-mediated signaling pathway; negative regulation of cell population proliferation; and positive regulation of transcription by RNA polymerase II. Located in nucleus. Part of protein-DNA complex.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: KIAA0535; neural zinc finger factor 3; neural zinc finger transcription factor 3; NZF-3; NZF3; ST18, C2H2C-type zinc finger; suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein); suppression of tumorigenicity 18 protein; suppression of tumorigenicity 18, zinc finger; ZC2H2C3; ZC2HC10; zinc finger protein 387; ZNF387
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38852,110,838 - 52,409,879 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl852,110,838 - 52,460,959 (-)EnsemblGRCh38hg38GRCh38
GRCh37853,023,398 - 53,322,439 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36853,185,952 - 53,484,856 (-)NCBINCBI36Build 36hg18NCBI36
Build 34853,185,951 - 53,484,856NCBI
Celera849,013,896 - 49,312,800 (-)NCBICelera
Cytogenetic Map8q11.23NCBI
HuRef848,491,480 - 48,790,797 (-)NCBIHuRef
CHM1_1853,075,494 - 53,374,880 (-)NCBICHM1_1
T2T-CHM13v2.0852,486,561 - 52,785,956 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (ISA)
nucleus  (IBA,IDA,IEA)
protein-DNA complex  (IDA)

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9478997   PMID:9628581   PMID:12107411   PMID:12477932   PMID:15489334   PMID:15489893   PMID:16344560   PMID:18676404   PMID:19274049   PMID:20379614   PMID:21873635   PMID:22437316  
PMID:23505305   PMID:23535033   PMID:23847314   PMID:24509857   PMID:27148741   PMID:29310965   PMID:30021884   PMID:30192416   PMID:30926339   PMID:31057535   PMID:33205400   PMID:33640202  
PMID:34600138   PMID:35256949   PMID:35396567   PMID:35914814  


Genomics

Comparative Map Data
ST18
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38852,110,838 - 52,409,879 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl852,110,838 - 52,460,959 (-)EnsemblGRCh38hg38GRCh38
GRCh37853,023,398 - 53,322,439 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36853,185,952 - 53,484,856 (-)NCBINCBI36Build 36hg18NCBI36
Build 34853,185,951 - 53,484,856NCBI
Celera849,013,896 - 49,312,800 (-)NCBICelera
Cytogenetic Map8q11.23NCBI
HuRef848,491,480 - 48,790,797 (-)NCBIHuRef
CHM1_1853,075,494 - 53,374,880 (-)NCBICHM1_1
T2T-CHM13v2.0852,486,561 - 52,785,956 (-)NCBIT2T-CHM13v2.0
St18
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3916,557,455 - 6,931,164 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl16,557,455 - 6,931,164 (+)EnsemblGRCm39 Ensembl
GRCm3816,487,231 - 6,860,940 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl16,487,231 - 6,860,940 (+)EnsemblGRCm38mm10GRCm38
MGSCv3716,720,132 - 6,851,021 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3616,720,132 - 6,851,021 (+)NCBIMGSCv36mm8
Celera16,710,574 - 6,841,534 (+)NCBICelera
Cytogenetic Map1A1NCBI
cM Map11.89NCBI
St18
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8517,369,383 - 17,701,094 (-)NCBIGRCr8
mRatBN7.2512,582,493 - 12,914,221 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl512,584,110 - 12,671,790 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx514,758,000 - 14,882,063 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0516,398,885 - 16,523,046 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0516,092,687 - 16,216,745 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0512,437,617 - 12,787,223 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl512,437,525 - 12,563,429 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0517,211,877 - 17,558,736 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4512,667,083 - 12,794,377 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1512,667,789 - 12,757,054 (-)NCBI
Celera512,004,612 - 12,128,698 (-)NCBICelera
Cytogenetic Map5q12NCBI
St18
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495545411,713,162 - 11,924,284 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495545411,715,538 - 12,016,396 (-)NCBIChiLan1.0ChiLan1.0
LOC100975471
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2767,739,768 - 67,875,568 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1843,464,812 - 43,608,444 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0848,528,831 - 48,832,588 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1845,913,225 - 46,056,607 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl845,913,225 - 46,016,468 (-)Ensemblpanpan1.1panPan2
ST18
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1293,971,851 - 4,266,642 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl293,974,157 - 4,080,067 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha294,414,287 - 4,559,855 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0294,041,053 - 4,100,323 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl294,041,055 - 4,167,048 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1293,970,494 - 4,116,072 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0294,195,680 - 4,341,349 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0294,270,696 - 4,416,286 (-)NCBIUU_Cfam_GSD_1.0
LOC101965562
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440530375,547,701 - 75,609,504 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936590699,630 - 798,178 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936590737,086 - 798,433 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ST18
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl477,897,737 - 78,002,009 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1477,707,143 - 78,002,016 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2484,961,281 - 85,183,932 (+)NCBISscrofa10.2Sscrofa10.2susScr3
LOC103236785
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1848,214,764 - 48,521,428 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl848,214,374 - 48,319,061 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603993,484,384 - 93,803,429 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
St18
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247353,239,871 - 3,341,499 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247352,987,832 - 3,343,680 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ST18
66 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145049449)x3 copy number gain See cases [RCV000051206] Chr8:241530..145049449 [GRCh38]
Chr8:191530..146274835 [GRCh37]
Chr8:181530..146245639 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:244417-145054775)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053604]|See cases [RCV000053604] Chr8:244417..145054775 [GRCh38]
Chr8:194417..146280161 [GRCh37]
Chr8:184417..146250965 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000053602] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
NM_014682.2(ST18):c.1864C>T (p.Arg622Ter) single nucleotide variant Malignant melanoma [RCV000068337] Chr8:52149920 [GRCh38]
Chr8:53062480 [GRCh37]
Chr8:53225033 [NCBI36]
Chr8:8q11.23		 not provided
NM_014682.2(ST18):c.1758G>A (p.Arg586=) single nucleotide variant Malignant melanoma [RCV000068338] Chr8:52158946 [GRCh38]
Chr8:53071506 [GRCh37]
Chr8:53234059 [NCBI36]
Chr8:8q11.23		 not provided
NM_014682.2(ST18):c.1493G>A (p.Gly498Glu) single nucleotide variant Malignant melanoma [RCV000068339] Chr8:52161476 [GRCh38]
Chr8:53074036 [GRCh37]
Chr8:53236589 [NCBI36]
Chr8:8q11.23		 not provided
NM_014682.2(ST18):c.1017G>A (p.Arg339=) single nucleotide variant Malignant melanoma [RCV000061801] Chr8:52171844 [GRCh38]
Chr8:53084404 [GRCh37]
Chr8:53246957 [NCBI36]
Chr8:8q11.23		 not provided
NM_014682.2(ST18):c.86+8359C>T single nucleotide variant Lung cancer [RCV000107467] Chr8:52203720 [GRCh38]
Chr8:53116280 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_014682.2(ST18):c.-190+663T>C single nucleotide variant Lung cancer [RCV000107468] Chr8:52220078 [GRCh38]
Chr8:53132638 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_014682.2(ST18):c.-497-22513G>C single nucleotide variant Lung cancer [RCV000107469] Chr8:52252590 [GRCh38]
Chr8:53165150 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_014682.2(ST18):c.-497-24412G>T single nucleotide variant Lung cancer [RCV000107470] Chr8:52254489 [GRCh38]
Chr8:53167049 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_014682.2(ST18):c.-497-47328C>T single nucleotide variant Lung cancer [RCV000107471] Chr8:52277405 [GRCh38]
Chr8:53189965 [GRCh37]
Chr8:8q11.23		 uncertain significance
GRCh38/hg38 8q11.1-13.2(chr8:46031334-69303787)x3 copy number gain See cases [RCV000133720] Chr8:46031334..69303787 [GRCh38]
Chr8:46942956..70216022 [GRCh37]
Chr8:47062121..70378576 [NCBI36]
Chr8:8q11.1-13.2		 pathogenic
GRCh38/hg38 8q11.23(chr8:52294744-53104010)x3 copy number gain See cases [RCV000137448] Chr8:52294744..53104010 [GRCh38]
Chr8:53207304..54016570 [GRCh37]
Chr8:53369857..54179123 [NCBI36]
Chr8:8q11.23		 pathogenic|likely benign
GRCh38/hg38 8p23.3-q24.3(chr8:241605-145054781)x3 copy number gain See cases [RCV000138643] Chr8:241605..145054781 [GRCh38]
Chr8:191605..146280167 [GRCh37]
Chr8:181605..146250971 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8q11.23(chr8:52387273-52944183)x3 copy number gain See cases [RCV000139568] Chr8:52387273..52944183 [GRCh38]
Chr8:53299833..53856743 [GRCh37]
Chr8:53462386..54019296 [NCBI36]
Chr8:8q11.23		 likely benign
GRCh38/hg38 8q11.1-24.3(chr8:46031340-139285494)x3 copy number gain See cases [RCV000139539] Chr8:46031340..139285494 [GRCh38]
Chr8:46942962..140297737 [GRCh37]
Chr8:47062127..140366919 [NCBI36]
Chr8:8q11.1-24.3		 pathogenic
GRCh38/hg38 8p12-q12.1(chr8:36580103-59618998)x3 copy number gain See cases [RCV000139582] Chr8:36580103..59618998 [GRCh38]
Chr8:36437621..60531557 [GRCh37]
Chr8:36556779..60694111 [NCBI36]
Chr8:8p12-q12.1		 pathogenic
GRCh38/hg38 8q11.23(chr8:52387348-52986011)x3 copy number gain See cases [RCV000139781] Chr8:52387348..52986011 [GRCh38]
Chr8:53299908..53898571 [GRCh37]
Chr8:53462461..54061124 [NCBI36]
Chr8:8q11.23		 uncertain significance
GRCh38/hg38 8q11.21-11.23(chr8:47338394-52753188)x3 copy number gain See cases [RCV000141920] Chr8:47338394..52753188 [GRCh38]
Chr8:48250960..53665748 [GRCh37]
Chr8:48413513..53828301 [NCBI36]
Chr8:8q11.21-11.23		 uncertain significance
GRCh38/hg38 8p23.3-q24.3(chr8:208048-145070385)x3 copy number gain See cases [RCV000141808] Chr8:208048..145070385 [GRCh38]
Chr8:158048..146295771 [GRCh37]
Chr8:148048..146266575 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8p21.3-q24.3(chr8:21291522-145070385)x3 copy number gain See cases [RCV000142021] Chr8:21291522..145070385 [GRCh38]
Chr8:21149033..146295771 [GRCh37]
Chr8:21193313..146266575 [NCBI36]
Chr8:8p21.3-q24.3		 pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:226452-145068712)x3 copy number gain See cases [RCV000142858] Chr8:226452..145068712 [GRCh38]
Chr8:176452..146294098 [GRCh37]
Chr8:166452..146264902 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh38/hg38 8q11.21-12.1(chr8:49471778-57825470)x1 copy number loss See cases [RCV000142642] Chr8:49471778..57825470 [GRCh38]
Chr8:50384337..58738029 [GRCh37]
Chr8:50546890..58900583 [NCBI36]
Chr8:8q11.21-12.1		 pathogenic|likely pathogenic
GRCh38/hg38 8p23.3-q24.3(chr8:241530-145054634)x3 copy number gain See cases [RCV000148092] Chr8:241530..145054634 [GRCh38]
Chr8:191530..146280020 [GRCh37]
Chr8:181530..146250824 [NCBI36]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p21.2-q12.1(chr8:24772064-24813176)x3 copy number gain See cases [RCV000446588] Chr8:24772064..24813176 [GRCh37]
Chr8:8p21.2-q12.1		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158991-146280828)x3 copy number gain See cases [RCV000447507] Chr8:158991..146280828 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771) copy number gain See cases [RCV000510234] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:158049-146295771)x3 copy number gain See cases [RCV000511095] Chr8:158049..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
NM_001352837.2(ST18):c.2314G>A (p.Gly772Ser) single nucleotide variant Inborn genetic diseases [RCV003292286] Chr8:52133288 [GRCh38]
Chr8:53045848 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2138A>T (p.His713Leu) single nucleotide variant Inborn genetic diseases [RCV003259589] Chr8:52142960 [GRCh38]
Chr8:53055520 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1552A>G (p.Ile518Val) single nucleotide variant Inborn genetic diseases [RCV003281178] Chr8:52161417 [GRCh38]
Chr8:53073977 [GRCh37]
Chr8:8q11.23		 likely benign
GRCh37/hg19 8p23.1-q24.3(chr8:12490999-146295771)x3 copy number gain See cases [RCV000512169] Chr8:12490999..146295771 [GRCh37]
Chr8:8p23.1-q24.3		 pathogenic
GRCh37/hg19 8q11.1-11.23(chr8:46863521-55218838)x3 copy number gain not provided [RCV000683033] Chr8:46863521..55218838 [GRCh37]
Chr8:8q11.1-11.23		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:164984-146293414)x3 copy number gain not provided [RCV000747254] Chr8:164984..146293414 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p23.3-q24.3(chr8:10213-146293414)x3 copy number gain not provided [RCV000747248] Chr8:10213..146293414 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8q11.21-12.1(chr8:49822483-58822602)x1 copy number loss not provided [RCV000747540] Chr8:49822483..58822602 [GRCh37]
Chr8:8q11.21-12.1		 pathogenic
GRCh37/hg19 8q11.23(chr8:53303885-53887419)x3 copy number gain not provided [RCV000747558] Chr8:53303885..53887419 [GRCh37]
Chr8:8q11.23		 benign
GRCh37/hg19 8q11.23(chr8:53303885-53911985)x3 copy number gain not provided [RCV000747559] Chr8:53303885..53911985 [GRCh37]
Chr8:8q11.23		 benign
NM_001352837.2(ST18):c.2834C>A (p.Ala945Glu) single nucleotide variant not provided [RCV000900128] Chr8:52118363 [GRCh38]
Chr8:53030923 [GRCh37]
Chr8:8q11.23		 benign
NM_001352837.2(ST18):c.846T>C (p.Asp282=) single nucleotide variant not provided [RCV000963457] Chr8:52172015 [GRCh38]
Chr8:53084575 [GRCh37]
Chr8:8q11.23		 benign
NM_001352837.2(ST18):c.2632G>A (p.Gly878Ser) single nucleotide variant Inborn genetic diseases [RCV003271691] Chr8:52131992 [GRCh38]
Chr8:53044552 [GRCh37]
Chr8:8q11.23		 uncertain significance
GRCh37/hg19 8q11.23(chr8:53311515-53535713)x3 copy number gain not provided [RCV000849390] Chr8:53311515..53535713 [GRCh37]
Chr8:8q11.23		 uncertain significance
GRCh37/hg19 8q11.23(chr8:53261856-53549167)x3 copy number gain not provided [RCV000849652] Chr8:53261856..53549167 [GRCh37]
Chr8:8q11.23		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not provided [RCV000848478] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p12-q24.3(chr8:31936551-146295771)x3 copy number gain not provided [RCV000848192] Chr8:31936551..146295771 [GRCh37]
Chr8:8p12-q24.3		 pathogenic
GRCh37/hg19 8p11.22-q12.3(chr8:39555657-64049089)x3 copy number gain not provided [RCV000846266] Chr8:39555657..64049089 [GRCh37]
Chr8:8p11.22-q12.3		 pathogenic
NM_001352837.2(ST18):c.1949T>C (p.Ile650Thr) single nucleotide variant not provided [RCV000973575] Chr8:52149835 [GRCh38]
Chr8:53062395 [GRCh37]
Chr8:8q11.23		 benign
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771) copy number gain Polydactyly [RCV002280629] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8q11.23(chr8:52605905-54913501)x3 copy number gain not provided [RCV001258408] Chr8:52605905..54913501 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1952T>C (p.Leu651Pro) single nucleotide variant Inborn genetic diseases [RCV002905748] Chr8:52149832 [GRCh38]
Chr8:53062392 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1609A>G (p.Asn537Asp) single nucleotide variant Inborn genetic diseases [RCV002946122] Chr8:52159095 [GRCh38]
Chr8:53071655 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.109G>A (p.Ala37Thr) single nucleotide variant Inborn genetic diseases [RCV002751759] Chr8:52180290 [GRCh38]
Chr8:53092850 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1873G>A (p.Asp625Asn) single nucleotide variant Inborn genetic diseases [RCV002749144] Chr8:52149911 [GRCh38]
Chr8:53062471 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1241C>T (p.Thr414Met) single nucleotide variant Inborn genetic diseases [RCV002973449] Chr8:52165189 [GRCh38]
Chr8:53077749 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1669C>T (p.Arg557Cys) single nucleotide variant Inborn genetic diseases [RCV002694295] Chr8:52159035 [GRCh38]
Chr8:53071595 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.465G>C (p.Gln155His) single nucleotide variant Inborn genetic diseases [RCV002759047] Chr8:52172396 [GRCh38]
Chr8:53084956 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1606C>T (p.Pro536Ser) single nucleotide variant Inborn genetic diseases [RCV002692458] Chr8:52159098 [GRCh38]
Chr8:53071658 [GRCh37]
Chr8:8q11.23		 likely benign
NM_001352837.2(ST18):c.107T>C (p.Met36Thr) single nucleotide variant Inborn genetic diseases [RCV003000913] Chr8:52180292 [GRCh38]
Chr8:53092852 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2663G>A (p.Arg888Gln) single nucleotide variant Inborn genetic diseases [RCV002757369] Chr8:52131961 [GRCh38]
Chr8:53044521 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1772T>A (p.Ile591Asn) single nucleotide variant Inborn genetic diseases [RCV002998471] Chr8:52158932 [GRCh38]
Chr8:53071492 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.419T>C (p.Val140Ala) single nucleotide variant Inborn genetic diseases [RCV002951726] Chr8:52172442 [GRCh38]
Chr8:53085002 [GRCh37]
Chr8:8q11.23		 likely benign
NM_001352837.2(ST18):c.1690G>A (p.Gly564Ser) single nucleotide variant Inborn genetic diseases [RCV003001570] Chr8:52159014 [GRCh38]
Chr8:53071574 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2519G>A (p.Cys840Tyr) single nucleotide variant Inborn genetic diseases [RCV002787012] Chr8:52132105 [GRCh38]
Chr8:53044665 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.595G>A (p.Ala199Thr) single nucleotide variant Inborn genetic diseases [RCV002954862] Chr8:52172266 [GRCh38]
Chr8:53084826 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.362G>C (p.Cys121Ser) single nucleotide variant Inborn genetic diseases [RCV002955511] Chr8:52172499 [GRCh38]
Chr8:53085059 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2381G>A (p.Arg794His) single nucleotide variant Inborn genetic diseases [RCV003004134] Chr8:52133120 [GRCh38]
Chr8:53045680 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1514C>T (p.Ala505Val) single nucleotide variant Inborn genetic diseases [RCV002987258] Chr8:52161455 [GRCh38]
Chr8:53074015 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1970A>G (p.Tyr657Cys) single nucleotide variant Inborn genetic diseases [RCV002957059] Chr8:52149814 [GRCh38]
Chr8:53062374 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1465A>G (p.Thr489Ala) single nucleotide variant Inborn genetic diseases [RCV002898237] Chr8:52161504 [GRCh38]
Chr8:53074064 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2218G>A (p.Ala740Thr) single nucleotide variant Inborn genetic diseases [RCV002673394] Chr8:52137434 [GRCh38]
Chr8:53049994 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1339T>C (p.Ser447Pro) single nucleotide variant Inborn genetic diseases [RCV002934171] Chr8:52164047 [GRCh38]
Chr8:53076607 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1939A>G (p.Thr647Ala) single nucleotide variant Inborn genetic diseases [RCV002855576] Chr8:52149845 [GRCh38]
Chr8:53062405 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.220C>T (p.Arg74Cys) single nucleotide variant Inborn genetic diseases [RCV002702472] Chr8:52180179 [GRCh38]
Chr8:53092739 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1774C>T (p.Leu592Phe) single nucleotide variant Inborn genetic diseases [RCV002939456] Chr8:52158930 [GRCh38]
Chr8:53071490 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1969T>C (p.Tyr657His) single nucleotide variant Inborn genetic diseases [RCV002812926] Chr8:52149815 [GRCh38]
Chr8:53062375 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1537G>A (p.Gly513Ser) single nucleotide variant Inborn genetic diseases [RCV002813072] Chr8:52161432 [GRCh38]
Chr8:53073992 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2108C>A (p.Ala703Asp) single nucleotide variant Inborn genetic diseases [RCV002809423] Chr8:52142990 [GRCh38]
Chr8:53055550 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2984A>G (p.Asp995Gly) single nucleotide variant Inborn genetic diseases [RCV002722943] Chr8:52116294 [GRCh38]
Chr8:53028854 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.536T>G (p.Ile179Ser) single nucleotide variant Inborn genetic diseases [RCV003277692] Chr8:52172325 [GRCh38]
Chr8:53084885 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2029G>A (p.Gly677Arg) single nucleotide variant Inborn genetic diseases [RCV003256165] Chr8:52149755 [GRCh38]
Chr8:53062315 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2896G>C (p.Glu966Gln) single nucleotide variant Inborn genetic diseases [RCV003192599] Chr8:52116382 [GRCh38]
Chr8:53028942 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.365A>T (p.Tyr122Phe) single nucleotide variant Inborn genetic diseases [RCV003200633] Chr8:52172496 [GRCh38]
Chr8:53085056 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.986G>T (p.Arg329Met) single nucleotide variant Inborn genetic diseases [RCV003174050] Chr8:52171875 [GRCh38]
Chr8:53084435 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1151C>T (p.Pro384Leu) single nucleotide variant Inborn genetic diseases [RCV003203109] Chr8:52166905 [GRCh38]
Chr8:53079465 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.737G>T (p.Cys246Phe) single nucleotide variant Inborn genetic diseases [RCV003347949] Chr8:52172124 [GRCh38]
Chr8:53084684 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.1430A>G (p.Asn477Ser) single nucleotide variant Inborn genetic diseases [RCV003381805] Chr8:52161539 [GRCh38]
Chr8:53074099 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.300G>T (p.Met100Ile) single nucleotide variant Inborn genetic diseases [RCV003386282] Chr8:52172561 [GRCh38]
Chr8:53085121 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2963C>T (p.Ala988Val) single nucleotide variant Inborn genetic diseases [RCV003371226] Chr8:52116315 [GRCh38]
Chr8:53028875 [GRCh37]
Chr8:8q11.23		 uncertain significance
NM_001352837.2(ST18):c.2416A>G (p.Lys806Glu) single nucleotide variant Inborn genetic diseases [RCV003351784] Chr8:52133085 [GRCh38]
Chr8:53045645 [GRCh37]
Chr8:8q11.23		 uncertain significance
GRCh37/hg19 8p23.3-q24.3(chr8:158048-146295771)x3 copy number gain not specified [RCV003986742] Chr8:158048..146295771 [GRCh37]
Chr8:8p23.3-q24.3		 pathogenic
GRCh37/hg19 8p21.2-q21.3(chr8:27024288-89410121)x3 copy number gain not specified [RCV003986754] Chr8:27024288..89410121 [GRCh37]
Chr8:8p21.2-q21.3		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:7576
Count of miRNA genes:1433
Interacting mature miRNAs:1917
Transcripts:ENST00000276480, ENST00000517456, ENST00000517580, ENST00000518037, ENST00000518053, ENST00000518453, ENST00000518501, ENST00000518545, ENST00000519118, ENST00000519201, ENST00000520257, ENST00000520279, ENST00000520716, ENST00000520811, ENST00000521119, ENST00000521549, ENST00000521582, ENST00000521824, ENST00000522102, ENST00000522251, ENST00000522861, ENST00000523652, ENST00000524078, ENST00000524183
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
D8S1110  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,180,972 - 53,181,245UniSTSGRCh37
Build 36853,343,525 - 53,343,798RGDNCBI36
Celera849,171,456 - 49,171,729RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,649,045 - 48,649,318UniSTS
Marshfield Genetic Map867.27UniSTS
Marshfield Genetic Map867.27RGD
deCODE Assembly Map865.47UniSTS
D8S1833  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371684,540,217 - 84,540,324UniSTSGRCh37
GRCh37853,110,368 - 53,110,637UniSTSGRCh37
Build 36853,272,921 - 53,273,190RGDNCBI36
Celera849,100,865 - 49,101,138RGD
Celera1668,842,350 - 68,842,457UniSTS
HuRef848,578,453 - 48,578,726UniSTS
HuRef1670,292,996 - 70,293,103UniSTS
Marshfield Genetic Map867.27UniSTS
Marshfield Genetic Map867.27RGD
Genethon Genetic Map866.9UniSTS
RH102335  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,107,605 - 53,107,741UniSTSGRCh37
Build 36853,270,158 - 53,270,294RGDNCBI36
Celera849,098,102 - 49,098,238RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,575,690 - 48,575,826UniSTS
GeneMap99-GB4 RH Map8278.74UniSTS
SHGC-81457  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,280,930 - 53,281,238UniSTSGRCh37
Build 36853,443,483 - 53,443,791RGDNCBI36
Celera849,271,288 - 49,271,596RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,749,181 - 48,749,489UniSTS
TNG Radiation Hybrid Map826739.0UniSTS
RH122708  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,282,205 - 53,282,525UniSTSGRCh37
Build 36853,444,758 - 53,445,078RGDNCBI36
Celera849,272,563 - 49,272,883RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,750,456 - 48,750,776UniSTS
TNG Radiation Hybrid Map826735.0UniSTS
RH122205  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,240,035 - 53,240,322UniSTSGRCh37
Build 36853,402,588 - 53,402,875RGDNCBI36
Celera849,230,371 - 49,230,658RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,708,268 - 48,708,555UniSTS
TNG Radiation Hybrid Map826704.0UniSTS
SHGC-106019  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,293,723 - 53,294,033UniSTSGRCh37
Build 36853,456,276 - 53,456,586RGDNCBI36
Celera849,284,082 - 49,284,392RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,762,079 - 48,762,389UniSTS
TNG Radiation Hybrid Map826743.0UniSTS
D8S567  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,180,979 - 53,181,174UniSTSGRCh37
Build 36853,343,532 - 53,343,727RGDNCBI36
Celera849,171,463 - 49,171,658RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,649,052 - 48,649,247UniSTS
TNG Radiation Hybrid Map826720.0UniSTS
Stanford-G3 RH Map82075.0UniSTS
Whitehead-RH Map8329.2UniSTS
Whitehead-YAC Contig Map8 UniSTS
NCBI RH Map8751.3UniSTS
STS-R27812  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,038,542 - 53,038,697UniSTSGRCh37
Build 36853,201,095 - 53,201,250RGDNCBI36
Celera849,029,043 - 49,029,198RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,506,630 - 48,506,785UniSTS
GeneMap99-GB4 RH Map8278.74UniSTS
D8S2071  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,247,396 - 53,247,539UniSTSGRCh37
Build 36853,409,949 - 53,410,092RGDNCBI36
Celera849,237,733 - 49,237,876RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,715,629 - 48,715,772UniSTS
Stanford-G3 RH Map82091.0UniSTS
NCBI RH Map8766.6UniSTS
GeneMap99-G3 RH Map82181.0UniSTS
ST18_2399  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,023,409 - 53,024,043UniSTSGRCh37
Build 36853,185,962 - 53,186,596RGDNCBI36
Celera849,013,913 - 49,014,547RGD
HuRef848,491,497 - 48,492,131UniSTS
SHGC-35973  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,023,417 - 53,023,536UniSTSGRCh37
Build 36853,185,970 - 53,186,089RGDNCBI36
Celera849,013,921 - 49,014,040RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,491,505 - 48,491,624UniSTS
Stanford-G3 RH Map82065.0UniSTS
NCBI RH Map8759.4UniSTS
GeneMap99-G3 RH Map82155.0UniSTS
SHGC-53515  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,317,530 - 53,317,776UniSTSGRCh37
Build 36853,480,083 - 53,480,329RGDNCBI36
Celera849,307,890 - 49,308,136RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,785,887 - 48,786,133UniSTS
TNG Radiation Hybrid Map826743.0UniSTS
D8S1933  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37853,247,326 - 53,247,550UniSTSGRCh37
Build 36853,409,879 - 53,410,103RGDNCBI36
Celera849,237,663 - 49,237,887RGD
Cytogenetic Map8q11.23UniSTS
HuRef848,715,559 - 48,715,783UniSTS
Whitehead-YAC Contig Map8 UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium 14 3 835 1 56
Low 118 5 288 2 26 2 80 4 2190 19 26 24 1 23 56
Below cutoff 2074 2314 1186 456 1029 300 3540 1648 651 213 1130 1294 159 1095 2328 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001352826 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352828 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352834 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352836 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352837 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352840 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352841 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352842 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352843 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352845 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352846 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352847 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352848 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352849 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352850 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352851 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352852 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352854 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352855 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352856 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352857 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352858 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352859 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352860 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352861 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352862 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352865 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352867 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352874 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352876 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352877 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352878 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352879 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352880 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352881 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352882 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352883 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001352884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_014682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148195 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_148196 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517635 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517637 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011517642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014058 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447350 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422485 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422486 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047422487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361601 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361602 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361604 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054361607 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002956655 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_002956656 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB011107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC021915 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC103831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC025662 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026316 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117147 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC117149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143872 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143873 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC143875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ639545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA288225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000276480   ⟹   ENSP00000276480
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,110,839 - 52,409,743 (-)Ensembl
RefSeq Acc Id: ENST00000517456
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,206,583 - 52,246,664 (-)Ensembl
RefSeq Acc Id: ENST00000517580   ⟹   ENSP00000428521
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,149,922 - 52,409,805 (-)Ensembl
RefSeq Acc Id: ENST00000518037
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,206,416 - 52,246,664 (-)Ensembl
RefSeq Acc Id: ENST00000518053
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,116,271 - 52,133,218 (-)Ensembl
RefSeq Acc Id: ENST00000518453
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,220,732 - 52,222,095 (-)Ensembl
RefSeq Acc Id: ENST00000518501
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,133,104 - 52,137,812 (-)Ensembl
RefSeq Acc Id: ENST00000518545
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,217,772 - 52,249,412 (-)Ensembl
RefSeq Acc Id: ENST00000519118   ⟹   ENSP00000428096
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,214,220 - 52,248,526 (-)Ensembl
RefSeq Acc Id: ENST00000519201
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,393,576 - 52,409,792 (-)Ensembl
RefSeq Acc Id: ENST00000520257
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,172,513 - 52,217,779 (-)Ensembl
RefSeq Acc Id: ENST00000520279
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,229,693 - 52,409,756 (-)Ensembl
RefSeq Acc Id: ENST00000520716
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,407,665 - 52,409,879 (-)Ensembl
RefSeq Acc Id: ENST00000520811
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,405,806 - 52,409,772 (-)Ensembl
RefSeq Acc Id: ENST00000521119
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,220,564 - 52,254,348 (-)Ensembl
RefSeq Acc Id: ENST00000521549
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,180,294 - 52,409,749 (-)Ensembl
RefSeq Acc Id: ENST00000521582   ⟹   ENSP00000430763
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,112,546 - 52,217,822 (-)Ensembl
RefSeq Acc Id: ENST00000521824   ⟹   ENSP00000429579
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,112,544 - 52,217,821 (-)Ensembl
RefSeq Acc Id: ENST00000522102
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,403,701 - 52,409,945 (-)Ensembl
RefSeq Acc Id: ENST00000522251   ⟹   ENSP00000428920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,112,544 - 52,217,822 (-)Ensembl
RefSeq Acc Id: ENST00000522861
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,125,884 - 52,133,144 (-)Ensembl
RefSeq Acc Id: ENST00000523652
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,408,983 - 52,460,959 (-)Ensembl
RefSeq Acc Id: ENST00000524078
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,407,636 - 52,409,882 (-)Ensembl
RefSeq Acc Id: ENST00000524183
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,403,327 - 52,409,772 (-)Ensembl
RefSeq Acc Id: ENST00000689386   ⟹   ENSP00000509475
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,110,838 - 52,409,756 (-)Ensembl
RefSeq Acc Id: ENST00000693301   ⟹   ENSP00000508476
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,110,838 - 52,409,756 (-)Ensembl
RefSeq Acc Id: ENST00000699087   ⟹   ENSP00000514122
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl852,110,847 - 52,409,756 (-)Ensembl
RefSeq Acc Id: NM_001352826   ⟹   NP_001339755
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352827   ⟹   NP_001339756
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352828   ⟹   NP_001339757
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352829   ⟹   NP_001339758
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352830   ⟹   NP_001339759
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352831   ⟹   NP_001339760
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352832   ⟹   NP_001339761
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352833   ⟹   NP_001339762
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352834   ⟹   NP_001339763
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352835   ⟹   NP_001339764
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352836   ⟹   NP_001339765
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352837   ⟹   NP_001339766
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352838   ⟹   NP_001339767
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352839   ⟹   NP_001339768
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352840   ⟹   NP_001339769
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352841   ⟹   NP_001339770
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352842   ⟹   NP_001339771
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352843   ⟹   NP_001339772
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352844   ⟹   NP_001339773
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352845   ⟹   NP_001339774
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352846   ⟹   NP_001339775
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352847   ⟹   NP_001339776
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352848   ⟹   NP_001339777
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352849   ⟹   NP_001339778
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352850   ⟹   NP_001339779
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352851   ⟹   NP_001339780
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352852   ⟹   NP_001339781
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352853   ⟹   NP_001339782
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352854   ⟹   NP_001339783
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352855   ⟹   NP_001339784
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352856   ⟹   NP_001339785
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,248,644 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,624,326 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352857   ⟹   NP_001339786
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,248,644 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,624,326 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352858   ⟹   NP_001339787
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352859   ⟹   NP_001339788
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352860   ⟹   NP_001339789
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352861   ⟹   NP_001339790
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352862   ⟹   NP_001339791
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352863   ⟹   NP_001339792
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352864   ⟹   NP_001339793
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352865   ⟹   NP_001339794
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352866   ⟹   NP_001339795
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352867   ⟹   NP_001339796
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352868   ⟹   NP_001339797
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352869   ⟹   NP_001339798
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,248,644 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,624,326 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352870   ⟹   NP_001339799
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352871   ⟹   NP_001339800
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352872   ⟹   NP_001339801
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352873   ⟹   NP_001339802
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352874   ⟹   NP_001339803
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352875   ⟹   NP_001339804
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352876   ⟹   NP_001339805
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352877   ⟹   NP_001339806
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352878   ⟹   NP_001339807
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352879   ⟹   NP_001339808
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,403,701 - 52,409,879 (-)NCBI
T2T-CHM13v2.0852,779,779 - 52,785,956 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352880   ⟹   NP_001339809
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,403,701 - 52,409,879 (-)NCBI
T2T-CHM13v2.0852,779,779 - 52,785,956 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352881   ⟹   NP_001339810
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,228,519 - 52,409,879 (-)NCBI
T2T-CHM13v2.0852,604,211 - 52,785,956 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352882   ⟹   NP_001339811
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,403,701 - 52,409,879 (-)NCBI
T2T-CHM13v2.0852,779,779 - 52,785,956 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352883   ⟹   NP_001339812
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,403,701 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,779,779 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001352884   ⟹   NP_001339813
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,403,701 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,779,779 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NM_014682   ⟹   NP_055497
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,409,756 (-)NCBI
GRCh37853,023,392 - 53,322,439 (-)RGD
GRCh37853,023,392 - 53,322,439 (-)NCBI
Build 36853,185,952 - 53,484,856 (-)NCBI Archive
Celera849,013,896 - 49,312,800 (-)RGD
HuRef848,491,480 - 48,790,797 (-)RGD
CHM1_1853,075,494 - 53,374,880 (-)NCBI
T2T-CHM13v2.0852,486,561 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148195
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,228,519 - 52,409,756 (-)NCBI
T2T-CHM13v2.0852,604,211 - 52,785,833 (-)NCBI
Sequence:
RefSeq Acc Id: NR_148196
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,228,519 - 52,248,644 (-)NCBI
T2T-CHM13v2.0852,604,211 - 52,624,326 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017014058   ⟹   XP_016869547
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447349   ⟹   XP_024303117
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024447350   ⟹   XP_024303118
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,171,752 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047422484   ⟹   XP_047278440
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
RefSeq Acc Id: XM_047422485   ⟹   XP_047278441
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
RefSeq Acc Id: XM_047422486   ⟹   XP_047278442
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,254,348 (-)NCBI
RefSeq Acc Id: XM_047422487   ⟹   XP_047278443
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,110,838 - 52,249,487 (-)NCBI
RefSeq Acc Id: XM_054361601   ⟹   XP_054217576
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
RefSeq Acc Id: XM_054361602   ⟹   XP_054217577
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
RefSeq Acc Id: XM_054361603   ⟹   XP_054217578
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
RefSeq Acc Id: XM_054361604   ⟹   XP_054217579
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
RefSeq Acc Id: XM_054361605   ⟹   XP_054217580
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,630,026 (-)NCBI
RefSeq Acc Id: XM_054361606   ⟹   XP_054217581
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,625,169 (-)NCBI
RefSeq Acc Id: XM_054361607   ⟹   XP_054217582
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0852,486,561 - 52,547,451 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001339755 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339756 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339757 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339758 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339759 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339760 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339761 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339762 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339763 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339764 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339765 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339766 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339767 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339768 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339769 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339770 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339771 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339772 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339773 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339774 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339775 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339776 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339777 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339778 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339779 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339780 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339781 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339782 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339783 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339784 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339785 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339786 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339787 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339788 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339789 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339790 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339791 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339792 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339793 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339794 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339795 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339796 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339797 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339798 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339799 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339800 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339801 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339802 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339803 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339804 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339805 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339806 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339807 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339808 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339809 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339810 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339811 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339812 (Get FASTA)   NCBI Sequence Viewer  
  NP_001339813 (Get FASTA)   NCBI Sequence Viewer  
  NP_055497 (Get FASTA)   NCBI Sequence Viewer  
  XP_016869547 (Get FASTA)   NCBI Sequence Viewer  
  XP_024303117 (Get FASTA)   NCBI Sequence Viewer  
  XP_024303118 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278440 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278441 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278442 (Get FASTA)   NCBI Sequence Viewer  
  XP_047278443 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217576 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217577 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217578 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217579 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217580 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217581 (Get FASTA)   NCBI Sequence Viewer  
  XP_054217582 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAI17148 (Get FASTA)   NCBI Sequence Viewer  
  AAI17150 (Get FASTA)   NCBI Sequence Viewer  
  BAA25461 (Get FASTA)   NCBI Sequence Viewer  
  EAW86715 (Get FASTA)   NCBI Sequence Viewer  
  EAW86716 (Get FASTA)   NCBI Sequence Viewer  
  EAW86717 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000276480
  ENSP00000276480.7
  ENSP00000428096.1
  ENSP00000428521.1
  ENSP00000428920.1
  ENSP00000429579.1
  ENSP00000430763.1
  ENSP00000508476
  ENSP00000508476.1
  ENSP00000509475
  ENSP00000509475.1
  ENSP00000514122
  ENSP00000514122.1
GenBank Protein O60284 (Get FASTA)   NCBI Sequence Viewer  
Reference Protein Sequences
RefSeq Acc Id: NP_055497   ⟸   NM_014682
- Peptide Label: isoform a
- UniProtKB: Q17RY1 (UniProtKB/Swiss-Prot),   O60284 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_016869547   ⟸   XM_017014058
- Peptide Label: isoform X1
- UniProtKB: Q17RY1 (UniProtKB/Swiss-Prot),   O60284 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339800   ⟸   NM_001352871
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339765   ⟸   NM_001352836
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339801   ⟸   NM_001352872
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339762   ⟸   NM_001352833
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339759   ⟸   NM_001352830
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339805   ⟸   NM_001352876
- Peptide Label: isoform f
- Sequence:
RefSeq Acc Id: NP_001339758   ⟸   NM_001352829
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339799   ⟸   NM_001352870
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339763   ⟸   NM_001352834
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339787   ⟸   NM_001352858
- Peptide Label: isoform c
- Sequence:
RefSeq Acc Id: NP_001339761   ⟸   NM_001352832
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339790   ⟸   NM_001352861
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339756   ⟸   NM_001352827
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339806   ⟸   NM_001352877
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001339792   ⟸   NM_001352863
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339767   ⟸   NM_001352838
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339791   ⟸   NM_001352862
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339764   ⟸   NM_001352835
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339766   ⟸   NM_001352837
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339755   ⟸   NM_001352826
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339760   ⟸   NM_001352831
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339757   ⟸   NM_001352828
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339802   ⟸   NM_001352873
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339777   ⟸   NM_001352848
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339776   ⟸   NM_001352847
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339789   ⟸   NM_001352860
- Peptide Label: isoform c
- Sequence:
RefSeq Acc Id: NP_001339774   ⟸   NM_001352845
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339796   ⟸   NM_001352867
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339795   ⟸   NM_001352866
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339769   ⟸   NM_001352840
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339768   ⟸   NM_001352839
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339773   ⟸   NM_001352844
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339778   ⟸   NM_001352849
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339788   ⟸   NM_001352859
- Peptide Label: isoform c
- Sequence:
RefSeq Acc Id: NP_001339771   ⟸   NM_001352842
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339794   ⟸   NM_001352865
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339803   ⟸   NM_001352874
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339772   ⟸   NM_001352843
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339793   ⟸   NM_001352864
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339770   ⟸   NM_001352841
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339775   ⟸   NM_001352846
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339779   ⟸   NM_001352850
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339781   ⟸   NM_001352852
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339797   ⟸   NM_001352868
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339780   ⟸   NM_001352851
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339783   ⟸   NM_001352854
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339784   ⟸   NM_001352855
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339782   ⟸   NM_001352853
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339807   ⟸   NM_001352878
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001339804   ⟸   NM_001352875
- Peptide Label: isoform d
- Sequence:
RefSeq Acc Id: NP_001339785   ⟸   NM_001352856
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001339798   ⟸   NM_001352869
- Peptide Label: isoform b
- Sequence:
RefSeq Acc Id: NP_001339786   ⟸   NM_001352857
- Peptide Label: isoform a
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024303117   ⟸   XM_024447349
- Peptide Label: isoform X1
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_024303118   ⟸   XM_024447350
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001339810   ⟸   NM_001352881
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001339808   ⟸   NM_001352879
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001339811   ⟸   NM_001352882
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001339809   ⟸   NM_001352880
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: NP_001339813   ⟸   NM_001352884
- Peptide Label: isoform h
- Sequence:
RefSeq Acc Id: NP_001339812   ⟸   NM_001352883
- Peptide Label: isoform h
- Sequence:
RefSeq Acc Id: ENSP00000428521   ⟸   ENST00000517580
RefSeq Acc Id: ENSP00000428096   ⟸   ENST00000519118
RefSeq Acc Id: ENSP00000429579   ⟸   ENST00000521824
RefSeq Acc Id: ENSP00000430763   ⟸   ENST00000521582
RefSeq Acc Id: ENSP00000428920   ⟸   ENST00000522251
RefSeq Acc Id: ENSP00000276480   ⟸   ENST00000276480
RefSeq Acc Id: ENSP00000509475   ⟸   ENST00000689386
RefSeq Acc Id: ENSP00000508476   ⟸   ENST00000693301
RefSeq Acc Id: XP_047278441   ⟸   XM_047422485
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047278442   ⟸   XM_047422486
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047278443   ⟸   XM_047422487
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047278440   ⟸   XM_047422484
- Peptide Label: isoform X1
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSP00000514122   ⟸   ENST00000699087
RefSeq Acc Id: XP_054217579   ⟸   XM_054361604
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054217580   ⟸   XM_054361605
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054217581   ⟸   XM_054361606
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054217577   ⟸   XM_054361602
- Peptide Label: isoform X1
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054217576   ⟸   XM_054361601
- Peptide Label: isoform X1
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054217578   ⟸   XM_054361603
- Peptide Label: isoform X1
- UniProtKB: O60284 (UniProtKB/Swiss-Prot),   Q17RY1 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054217582   ⟸   XM_054361607
- Peptide Label: isoform X3
Protein Domains
Myelin transcription factor

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O60284-F1-model_v2 AlphaFold O60284 1-1047 view protein structure

Promoters
RGD ID:7213285
Promoter ID:EPDNEW_H12388
Type:multiple initiation site
Name:ST18_3
Description:ST18, C2H2C-type zinc finger
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12389  EPDNEW_H12390  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,329,282 - 52,329,342EPDNEW
RGD ID:7213287
Promoter ID:EPDNEW_H12389
Type:initiation region
Name:ST18_1
Description:ST18, C2H2C-type zinc finger
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H12388  EPDNEW_H12390  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38852,409,756 - 52,409,816EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:18695 AgrOrtholog
COSMIC ST18 COSMIC
Ensembl Genes ENSG00000147488 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000276480 ENTREZGENE
  ENST00000276480.11 UniProtKB/Swiss-Prot
  ENST00000517580.5 UniProtKB/TrEMBL
  ENST00000519118.5 UniProtKB/TrEMBL
  ENST00000521582.5 UniProtKB/TrEMBL
  ENST00000521824.5 UniProtKB/TrEMBL
  ENST00000522102 ENTREZGENE
  ENST00000522251.5 UniProtKB/TrEMBL
  ENST00000689386 ENTREZGENE
  ENST00000689386.1 UniProtKB/Swiss-Prot
  ENST00000693301 ENTREZGENE
  ENST00000693301.1 UniProtKB/Swiss-Prot
  ENST00000699087 ENTREZGENE
  ENST00000699087.1 UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.320.30 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000147488 GTEx
HGNC ID HGNC:18695 ENTREZGENE
Human Proteome Map ST18 Human Proteome Map
InterPro Myelin_TF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Znf_C2H2C_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:9705 UniProtKB/Swiss-Prot
NCBI Gene 9705 ENTREZGENE
OMIM 617155 OMIM
PANTHER MYELIN TRANSCRIPTION FACTOR 1-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SUPPRESSION OF TUMORIGENICITY 18 PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam MYT1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  zf-C2HC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA38642 PharmGKB, RGD
PROSITE ZF_CCHHC UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF103637 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt E5RFE8_HUMAN UniProtKB/TrEMBL
  E5RHS3_HUMAN UniProtKB/TrEMBL
  E5RHY1_HUMAN UniProtKB/TrEMBL
  E5RID0_HUMAN UniProtKB/TrEMBL
  E5RK88_HUMAN UniProtKB/TrEMBL
  L8E831_HUMAN UniProtKB/TrEMBL
  O60284 ENTREZGENE
  Q17RY1 ENTREZGENE
  ST18_HUMAN UniProtKB/Swiss-Prot
UniProt Secondary Q17RY1 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-02-19 ST18  ST18 C2H2C-type zinc finger transcription factor    ST18, C2H2C-type zinc finger  Symbol and/or name change 5135510 APPROVED
2016-05-10 ST18  ST18, C2H2C-type zinc finger    suppression of tumorigenicity 18, zinc finger  Symbol and/or name change 5135510 APPROVED
2014-03-26 ST18  suppression of tumorigenicity 18, zinc finger    suppression of tumorigenicity 18 (breast carcinoma) (zinc finger protein)  Symbol and/or name change 5135510 APPROVED