HSPE1P10 (heat shock protein family E (Hsp10) member 1 pseudogene 10) - Rat Genome Database

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Gene: HSPE1P10 (heat shock protein family E (Hsp10) member 1 pseudogene 10) Homo sapiens
Analyze
Symbol: HSPE1P10
Name: heat shock protein family E (Hsp10) member 1 pseudogene 10
RGD ID: 7369405
HGNC Page HGNC:49329
Description:
Type: pseudo (Ensembl: processed_pseudogene)
RefSeq Status: INFERRED
Related Functional Gene: HSPE1  
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385126,737,766 - 126,738,084 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5126,737,438 - 126,737,995 (-)EnsemblGRCh38hg38GRCh38
GRCh375126,073,458 - 126,073,776 (-)NCBIGRCh37GRCh37hg19GRCh37
Cytogenetic Map5q23.2NCBI
HuRef5121,265,778 - 121,266,038 (-)NCBIHuRef
CHM1_15125,506,080 - 125,506,340 (-)NCBICHM1_1
T2T-CHM13v2.05127,257,271 - 127,257,589 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:276
Count of miRNA genes:221
Interacting mature miRNAs:225
Transcripts:ENST00000508631
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High
Medium
Low 10 2 13 5 18 5 4 5 27 21 22
Below cutoff 250 273 227 82 170 66 446 173 406 106 263 264 19 83 264 1

Sequence


Reference Sequences
RefSeq Acc Id: ENST00000508631
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl5126,737,438 - 126,737,995 (-)Ensembl

Additional Information

Database Acc Id Source(s)
COSMIC HSPE1P10 COSMIC
Ensembl Genes ENSG00000249768 Ensembl
GTEx ENSG00000249768 GTEx
HGNC ID HGNC:49329 ENTREZGENE
Human Proteome Map HSPE1P10 Human Proteome Map
NCBI Gene HSPE1P10 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-11-24 HSPE1P10  heat shock protein family E (Hsp10) member 1 pseudogene 10    heat shock 10kDa protein 1 pseudogene 10  Symbol and/or name change 5135510 APPROVED