Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Experimental Liver Cirrhosis | | ISO | ZFP37 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25380136 | |
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Imported Disease Annotations - CTDTerm | Qualifier | Evidence | With | Reference | Notes | Source | Original Reference(s) | Experimental Liver Cirrhosis | | ISO | ZFP37 (Homo sapiens) | 11554173 | CTD Direct Evidence: marker/mechanism | CTD | PMID:25380136 | |
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# | Reference Title | Reference Citation |
1. | Mouse brain organization revealed through direct genome-scale TF expression analysis. | Gray PA, etal., Science 2004 Dec 24;306(5705):2255-7. |
2. | Zfp-37 is a member of the KRAB zinc finger gene family and is expressed in neurons of the developing and adult CNS. | Mazarakis N, etal., Genomics 1996 Apr 15;33(2):247-57. |
3. | Electronic Transfer of Homolog Data | MGD and Homologene mouse data transfer |
4. | MGDs mouse GO annotations | MGD data from the GO Consortium |
5. | ClinVar Automated Import and Annotation Pipeline | RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations |
6. | Data Import for Chemical-Gene Interactions | RGD automated import pipeline for gene-chemical interactions |
PMID:1614869 | PMID:2114017 | PMID:7774911 | PMID:8088814 | PMID:9535899 | PMID:10337627 | PMID:10349636 | PMID:11042159 | PMID:11076861 | PMID:11217851 | PMID:11544199 | PMID:12466851 |
PMID:12477932 | PMID:12520002 | PMID:14610273 | PMID:16141072 | PMID:16141073 | PMID:18023262 | PMID:18287559 | PMID:20059953 | PMID:20412781 | PMID:21267068 | PMID:21873635 | PMID:32325033 |
PMID:33863978 |
Zfp37 (Mus musculus - house mouse) |
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ZFP37 (Homo sapiens - human) |
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Zfp37 (Rattus norvegicus - Norway rat) |
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Zfp37 (Chinchilla lanigera - long-tailed chinchilla) |
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ZFP37 (Pan paniscus - bonobo/pygmy chimpanzee) |
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LOC481675 (Canis lupus familiaris - dog) |
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Zfp37 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel) |
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ZFP37 (Sus scrofa - pig) |
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ZFP37 (Chlorocebus sabaeus - green monkey) |
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Zfp37 (Heterocephalus glaber - naked mole-rat) |
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Variants in Zfp37
16 total Variants |
The detailed report is available here: | Full Report | CSV | TAB | Printer | ||||
miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/). For more information about miRGate, see PMID:25858286 or access the full paper here. |
The following QTLs overlap with this region. | Full Report | CSV | TAB | Printer | Gviewer |
AV042165 |
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X89264 |
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RefSeq Transcripts | NM_001290350 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
NM_001290351 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001290353 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001348347 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_001424895 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NM_009554 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
NR_188978 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
GenBank Nucleotide | AK032469 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
AK043700 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
AL683829 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC024863 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BC063757 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
BM228461 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CF915126 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CH466527 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CJ078183 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CJ080611 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CO430987 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CO433117 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CO434318 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
CT990635 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X52533 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X64413 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X89264 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles | |
X89265 | (Get FASTA) | NCBI Sequence Viewer | Search GEO for Microarray Profiles |
RefSeq Acc Id: | ENSMUST00000068822 ⟹ ENSMUSP00000070463 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000129511 ⟹ ENSMUSP00000152291 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000212325 ⟹ ENSMUSP00000148492 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000220873 ⟹ ENSMUSP00000152520 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000221329 ⟹ ENSMUSP00000152266 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000222050 ⟹ ENSMUSP00000152491 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | ENSMUST00000222748 ⟹ ENSMUSP00000152400 | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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RefSeq Acc Id: | NM_001290350 ⟹ NP_001277279 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001290351 ⟹ NP_001277280 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001290353 ⟹ NP_001277282 | ||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||
Type: | CODING | ||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001348347 ⟹ NP_001335276 | ||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||
Type: | CODING | ||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NM_001424895 ⟹ NP_001411824 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | CODING | ||||||||
Position: |
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RefSeq Acc Id: | NM_009554 ⟹ NP_033580 | ||||||||||||||||||||||||
RefSeq Status: | VALIDATED | ||||||||||||||||||||||||
Type: | CODING | ||||||||||||||||||||||||
Position: |
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Sequence: |
RefSeq Acc Id: | NR_188978 | ||||||||
RefSeq Status: | VALIDATED | ||||||||
Type: | NON-CODING | ||||||||
Position: |
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Protein RefSeqs | NP_001277279 | (Get FASTA) | NCBI Sequence Viewer |
NP_001277280 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001277282 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001335276 | (Get FASTA) | NCBI Sequence Viewer | |
NP_001411824 | (Get FASTA) | NCBI Sequence Viewer | |
NP_033580 | (Get FASTA) | NCBI Sequence Viewer | |
GenBank Protein | AAH24863 | (Get FASTA) | NCBI Sequence Viewer |
AAH63757 | (Get FASTA) | NCBI Sequence Viewer | |
BAC27886 | (Get FASTA) | NCBI Sequence Viewer | |
CAA36769 | (Get FASTA) | NCBI Sequence Viewer | |
CAA45758 | (Get FASTA) | NCBI Sequence Viewer | |
CAA61539 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31158 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31159 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31160 | (Get FASTA) | NCBI Sequence Viewer | |
EDL31161 | (Get FASTA) | NCBI Sequence Viewer | |
Ensembl Protein | ENSMUSP00000070463 | ||
ENSMUSP00000070463.4 | |||
ENSMUSP00000148492.2 | |||
ENSMUSP00000152266 | |||
ENSMUSP00000152266.2 | |||
ENSMUSP00000152291.2 | |||
ENSMUSP00000152400 | |||
ENSMUSP00000152400.2 | |||
ENSMUSP00000152491 | |||
ENSMUSP00000152491.2 | |||
ENSMUSP00000152520.2 | |||
GenBank Protein | P17141 | (Get FASTA) | NCBI Sequence Viewer |
RefSeq Acc Id: | NP_033580 ⟸ NM_009554 |
- Peptide Label: | isoform 2 |
- UniProtKB: | Q6P3Z4 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001277280 ⟸ NM_001290351 |
- Peptide Label: | isoform 3 |
- UniProtKB: | A0A1Y7VLM5 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001277279 ⟸ NM_001290350 |
- Peptide Label: | isoform 1 |
- UniProtKB: | Q62514 (UniProtKB/Swiss-Prot), Q80YX7 (UniProtKB/Swiss-Prot), P17141 (UniProtKB/Swiss-Prot) |
- Sequence: |
RefSeq Acc Id: | NP_001277282 ⟸ NM_001290353 |
- Peptide Label: | isoform 4 |
- UniProtKB: | A0A1Y7VJF3 (UniProtKB/TrEMBL) |
- Sequence: |
RefSeq Acc Id: | NP_001335276 ⟸ NM_001348347 |
- Peptide Label: | isoform 4 |
- UniProtKB: | A0A1Y7VJF3 (UniProtKB/TrEMBL) |
RefSeq Acc Id: | ENSMUSP00000152400 ⟸ ENSMUST00000222748 |
RefSeq Acc Id: | ENSMUSP00000152491 ⟸ ENSMUST00000222050 |
RefSeq Acc Id: | ENSMUSP00000070463 ⟸ ENSMUST00000068822 |
RefSeq Acc Id: | ENSMUSP00000152291 ⟸ ENSMUST00000129511 |
RefSeq Acc Id: | ENSMUSP00000148492 ⟸ ENSMUST00000212325 |
RefSeq Acc Id: | ENSMUSP00000152266 ⟸ ENSMUST00000221329 |
RefSeq Acc Id: | ENSMUSP00000152520 ⟸ ENSMUST00000220873 |
RefSeq Acc Id: | NP_001411824 ⟸ NM_001424895 |
- Peptide Label: | isoform 5 |
Name | Modeler | Protein Id | AA Range | Protein Structure |
AF-P17141-F1-model_v2 | AlphaFold | P17141 | 1-594 | view protein structure |
RGD ID: | 6836705 | ||||||||
Promoter ID: | MM_KWN:37922 | ||||||||
Type: | CpG-Island | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | MPROMDB | ||||||||
Tissues & Cell Lines: | 3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Lung, MEF_B4, MEF_B6 | ||||||||
Transcripts: | NM_009554, OTTMUST00000000788, OTTMUST00000000789, OTTMUST00000000790 | ||||||||
Position: |
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RGD ID: | 6883586 | ||||||||
Promoter ID: | EPDNEW_M5244 | ||||||||
Type: | multiple initiation site | ||||||||
Name: | Zfp37_1 | ||||||||
Description: | Mus musculus zinc finger protein 37 , transcript variant 1, mRNA. | ||||||||
SO ACC ID: | SO:0000170 | ||||||||
Source: | EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/) | ||||||||
Experiment Methods: | Single-end sequencing. | ||||||||
Position: |
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Database | Acc Id | Source(s) |
AGR Gene | MGI:99181 | AgrOrtholog |
Ensembl Genes | ENSMUSG00000028389 | Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Ensembl Transcript | ENSMUST00000068822 | ENTREZGENE |
ENSMUST00000068822.4 | UniProtKB/Swiss-Prot | |
ENSMUST00000129511.3 | UniProtKB/TrEMBL | |
ENSMUST00000212325.2 | UniProtKB/TrEMBL | |
ENSMUST00000220873.2 | UniProtKB/TrEMBL | |
ENSMUST00000221329 | ENTREZGENE | |
ENSMUST00000221329.2 | UniProtKB/TrEMBL | |
ENSMUST00000222050 | ENTREZGENE | |
ENSMUST00000222050.2 | UniProtKB/TrEMBL | |
ENSMUST00000222748 | ENTREZGENE | |
ENSMUST00000222748.2 | UniProtKB/TrEMBL | |
Gene3D-CATH | 6.10.140.140 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
Classic Zinc Finger | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
InterPro | KRAB | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
KRAB_dom_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_C2H2_sf | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Znf_C2H2_type | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
MGD | MGI:99181 | ENTREZGENE |
NCBI Gene | 22696 | ENTREZGENE |
PANTHER | ENDOTHELIAL ZINC FINGER PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
FEZ FAMILY ZINC FINGER PROTEIN 2-RELATED | UniProtKB/TrEMBL | |
ZINC FINGER PROTEIN | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
ZINC FINGER PROTEIN ZIC AND GLI | UniProtKB/TrEMBL | |
Pfam | KRAB | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
zf-C2H2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
zf-H2C2_2 | UniProtKB/TrEMBL | |
PhenoGen | Zfp37 | PhenoGen |
PROSITE | KRAB | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ZINC_FINGER_C2H2_1 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
ZINC_FINGER_C2H2_2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
SMART | KRAB | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
ZnF_C2H2 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
Superfamily-SCOP | SSF109640 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL |
SSF57667 | UniProtKB/Swiss-Prot, UniProtKB/TrEMBL | |
UniProt | A0A1D5RLS9_MOUSE | UniProtKB/TrEMBL |
A0A1Y7VJ69_MOUSE | UniProtKB/TrEMBL | |
A0A1Y7VJF3 | ENTREZGENE, UniProtKB/TrEMBL | |
A0A1Y7VLM5 | ENTREZGENE, UniProtKB/TrEMBL | |
P17141 | ENTREZGENE | |
Q62514 | ENTREZGENE | |
Q6P3Z4 | ENTREZGENE, UniProtKB/TrEMBL | |
Q80YX7 | ENTREZGENE | |
Q8CCM5_MOUSE | UniProtKB/TrEMBL | |
Q8R1B1_MOUSE | UniProtKB/TrEMBL | |
ZFP37_MOUSE | UniProtKB/Swiss-Prot | |
UniProt Secondary | Q62514 | UniProtKB/Swiss-Prot |
Q80YX7 | UniProtKB/Swiss-Prot |