ACOX3 (acyl-CoA oxidase 3, pristanoyl) - Rat Genome Database

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Gene: ACOX3 (acyl-CoA oxidase 3, pristanoyl) Homo sapiens
Analyze
Symbol: ACOX3
Name: acyl-CoA oxidase 3, pristanoyl
RGD ID: 736892
HGNC Page HGNC:121
Description: Predicted to enable fatty acid binding activity; flavin adenine dinucleotide binding activity; and pristanoyl-CoA oxidase activity. Predicted to be involved in fatty acid beta-oxidation using acyl-CoA oxidase and lipid homeostasis. Located in peroxisome.
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: acyl-Coenzyme A oxidase 3, pristanoyl; branched-chain acyl-CoA oxidase; BRCACox; peroxisomal acyl-coenzyme A oxidase 3; pristanoyl-CoA oxidase
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3848,355,305 - 8,440,723 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl48,366,282 - 8,440,723 (-)EnsemblGRCh38hg38GRCh38
GRCh3748,368,009 - 8,442,450 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3648,418,909 - 8,493,352 (-)NCBINCBI36Build 36hg18NCBI36
Build 3448,486,518 - 8,560,499NCBI
Celera48,261,321 - 8,335,759 (-)NCBICelera
Cytogenetic Map4p16.1NCBI
HuRef48,287,364 - 8,362,315 (-)NCBIHuRef
CHM1_148,366,366 - 8,440,788 (-)NCBICHM1_1
T2T-CHM13v2.048,337,453 - 8,420,469 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytosol  (TAS)
membrane  (HDA)
peroxisomal matrix  (TAS)
peroxisome  (IBA,IDA,IEA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. KEGG: Kyoto Encyclopedia of Genes and Genomes KEGG
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8125298   PMID:8387517   PMID:8993592   PMID:9271077   PMID:12477932   PMID:15231748   PMID:15489334   PMID:15599942   PMID:16344560   PMID:16756494   PMID:19946888   PMID:20178365  
PMID:20677014   PMID:20877624   PMID:21659360   PMID:21873635   PMID:26186194   PMID:28514442   PMID:29568061   PMID:31975215   PMID:32393512   PMID:32513696   PMID:33961781   PMID:35562734  
PMID:35748872   PMID:35831314   PMID:36215168   PMID:36736316  


Genomics

Comparative Map Data
ACOX3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3848,355,305 - 8,440,723 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl48,366,282 - 8,440,723 (-)EnsemblGRCh38hg38GRCh38
GRCh3748,368,009 - 8,442,450 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3648,418,909 - 8,493,352 (-)NCBINCBI36Build 36hg18NCBI36
Build 3448,486,518 - 8,560,499NCBI
Celera48,261,321 - 8,335,759 (-)NCBICelera
Cytogenetic Map4p16.1NCBI
HuRef48,287,364 - 8,362,315 (-)NCBIHuRef
CHM1_148,366,366 - 8,440,788 (-)NCBICHM1_1
T2T-CHM13v2.048,337,453 - 8,420,469 (-)NCBIT2T-CHM13v2.0
Acox3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39535,740,293 - 35,772,397 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl535,740,384 - 35,772,696 (+)EnsemblGRCm39 Ensembl
GRCm38535,582,981 - 35,614,208 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl535,583,040 - 35,615,352 (+)EnsemblGRCm38mm10GRCm38
MGSCv37535,925,709 - 35,956,450 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36535,899,921 - 35,930,662 (+)NCBIMGSCv36mm8
Celera533,056,108 - 33,087,085 (+)NCBICelera
Cytogenetic Map5B3NCBI
cM Map518.32NCBI
Acox3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81479,358,604 - 79,405,160 (-)NCBIGRCr8
mRatBN7.21475,133,986 - 75,176,767 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1475,094,676 - 75,176,205 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1479,575,514 - 79,629,707 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01480,816,379 - 80,870,575 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01477,261,371 - 77,315,558 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01480,313,202 - 80,358,115 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1480,314,431 - 80,355,420 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01479,942,668 - 79,982,780 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41480,769,000 - 80,809,809 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11480,771,390 - 80,812,200 (-)NCBI
Celera1474,065,866 - 74,104,532 (-)NCBICelera
Cytogenetic Map14q21NCBI
Acox3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555142,656,144 - 2,685,896 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555142,653,502 - 2,690,452 (+)NCBIChiLan1.0ChiLan1.0
ACOX3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v238,642,020 - 8,727,303 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan148,569,231 - 8,654,531 (-)NCBINHGRI_mPanPan1
PanPan1.148,432,788 - 8,506,499 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl48,432,788 - 8,494,157 (-)Ensemblpanpan1.1panPan2
ACOX3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1360,154,012 - 60,205,696 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl360,153,775 - 60,203,554 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha362,804,141 - 62,856,135 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0360,631,684 - 60,683,139 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl360,628,819 - 60,680,866 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1360,123,908 - 60,162,124 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0360,327,224 - 60,379,691 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0360,685,106 - 60,736,638 (-)NCBIUU_Cfam_GSD_1.0
Acox3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528565,992,882 - 66,029,673 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647719,694,555 - 19,731,386 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647719,696,274 - 19,731,338 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACOX3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl82,716,918 - 2,770,801 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.182,716,913 - 2,756,221 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.284,391,443 - 4,418,723 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ACOX3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12744,313,297 - 44,366,702 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_023666051635,738 - 689,992 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Acox3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475523,995,089 - 24,024,083 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475523,995,256 - 24,026,581 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in ACOX3
62 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 4p16.3-15.1(chr4:72555-28066309)x1 copy number loss See cases [RCV000051642] Chr4:72555..28066309 [GRCh38]
Chr4:72447..28067931 [GRCh37]
Chr4:62447..27677029 [NCBI36]
Chr4:4p16.3-15.1
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:56878-14499760)x1 copy number loss See cases [RCV000051614] Chr4:56878..14499760 [GRCh38]
Chr4:56772..14501384 [GRCh37]
Chr4:46772..14110482 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
GRCh38/hg38 4p16.3-15.2(chr4:51519-26519788)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051752]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051752]|See cases [RCV000051752] Chr4:51519..26519788 [GRCh38]
Chr4:51413..26521410 [GRCh37]
Chr4:41413..26130508 [NCBI36]
Chr4:4p16.3-15.2
pathogenic
GRCh38/hg38 4p16.3-15.1(chr4:72555-33130620)x3 copy number gain See cases [RCV000051753] Chr4:72555..33130620 [GRCh38]
Chr4:72447..33132242 [GRCh37]
Chr4:62447..32808637 [NCBI36]
Chr4:4p16.3-15.1
pathogenic
GRCh38/hg38 4p16.3-14(chr4:85149-38700366)x3 copy number gain See cases [RCV000051757] Chr4:85149..38700366 [GRCh38]
Chr4:85040..38701987 [GRCh37]
Chr4:75040..38378382 [NCBI36]
Chr4:4p16.3-14
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:2231690-11197847)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051758]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051758]|See cases [RCV000051758] Chr4:2231690..11197847 [GRCh38]
Chr4:2233417..11199471 [GRCh37]
Chr4:2203215..10808569 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:72555-10004195)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051672]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051672]|See cases [RCV000051672] Chr4:72555..10004195 [GRCh38]
Chr4:72447..10005819 [GRCh37]
Chr4:62447..9614917 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-15.2(chr4:85149-22450018)x3 copy number gain See cases [RCV000051755] Chr4:85149..22450018 [GRCh38]
Chr4:85040..22451641 [GRCh37]
Chr4:75040..22060739 [NCBI36]
Chr4:4p16.3-15.2
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:72555-11610824)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051674]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000051674]|See cases [RCV000051674] Chr4:72555..11610824 [GRCh38]
Chr4:72447..11612448 [GRCh37]
Chr4:62447..11221546 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:85149-17486742)x1 copy number loss See cases [RCV000051679] Chr4:85149..17486742 [GRCh38]
Chr4:85040..17488365 [GRCh37]
Chr4:75040..17097463 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:51319-10250807)x3 copy number gain See cases [RCV000051743] Chr4:51319..10250807 [GRCh38]
Chr4:51213..10252431 [GRCh37]
Chr4:41213..9861529 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.2-16.1(chr4:5455628-10640216)x1 copy number loss See cases [RCV000053262] Chr4:5455628..10640216 [GRCh38]
Chr4:5457355..10641840 [GRCh37]
Chr4:5508256..10250938 [NCBI36]
Chr4:4p16.2-16.1
pathogenic
GRCh38/hg38 4p16.3-14(chr4:72555-39477144)x3 copy number gain See cases [RCV000133677] Chr4:72555..39477144 [GRCh38]
Chr4:72447..39478764 [GRCh37]
Chr4:62447..39155159 [NCBI36]
Chr4:4p16.3-14
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:78578-10335613)x1 copy number loss See cases [RCV000135336] Chr4:78578..10335613 [GRCh38]
Chr4:78470..10337237 [GRCh37]
Chr4:68470..9946335 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:78578-15625573)x3 copy number gain See cases [RCV000135349] Chr4:78578..15625573 [GRCh38]
Chr4:78470..15627196 [GRCh37]
Chr4:68470..15236294 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:72555-17278013)x1 copy number loss See cases [RCV000135657] Chr4:72555..17278013 [GRCh38]
Chr4:72447..17279636 [GRCh37]
Chr4:62447..16888734 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:135972-9369341)x1 copy number loss See cases [RCV000135436] Chr4:135972..9369341 [GRCh38]
Chr4:129753..9371067 [GRCh37]
Chr4:119753..8980165 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:72555-15658035)x1 copy number loss See cases [RCV000135532] Chr4:72555..15658035 [GRCh38]
Chr4:72447..15659658 [GRCh37]
Chr4:62447..15268756 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:37335-9369258)x1 copy number loss See cases [RCV000135992] Chr4:37335..9369258 [GRCh38]
Chr4:37336..9370984 [GRCh37]
Chr4:27336..8980082 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:72555-10250666)x1 copy number loss See cases [RCV000137036] Chr4:72555..10250666 [GRCh38]
Chr4:72447..10252290 [GRCh37]
Chr4:62447..9861388 [NCBI36]
Chr4:4p16.3-16.1
pathogenic|uncertain significance
GRCh38/hg38 4p16.3-15.31(chr4:51519-17798196)x3 copy number gain See cases [RCV000137071] Chr4:51519..17798196 [GRCh38]
Chr4:51413..17799819 [GRCh37]
Chr4:41413..17408917 [NCBI36]
Chr4:4p16.3-15.31
pathogenic
GRCh38/hg38 4p16.3-12(chr4:36424-47491595)x3 copy number gain See cases [RCV000137261] Chr4:36424..47491595 [GRCh38]
Chr4:36424..47493612 [GRCh37]
Chr4:26424..47188369 [NCBI36]
Chr4:4p16.3-12
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:72555-12898612)x1 copy number loss See cases [RCV000138198] Chr4:72555..12898612 [GRCh38]
Chr4:72447..12900236 [GRCh37]
Chr4:62447..12509334 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
GRCh38/hg38 4p16.1(chr4:8414872-10011846)x3 copy number gain See cases [RCV000137908] Chr4:8414872..10011846 [GRCh38]
Chr4:8416599..10013470 [GRCh37]
Chr4:8467499..9622568 [NCBI36]
Chr4:4p16.1
likely benign
GRCh38/hg38 4p16.3-15.31(chr4:72555-21022414)x3 copy number gain See cases [RCV000138305] Chr4:72555..21022414 [GRCh38]
Chr4:72447..21024037 [GRCh37]
Chr4:62447..20633135 [NCBI36]
Chr4:4p16.3-15.31
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:36424-9369341)x1 copy number loss See cases [RCV000138227] Chr4:36424..9369341 [GRCh38]
Chr4:36424..9371067 [GRCh37]
Chr4:26424..8980165 [NCBI36]
Chr4:4p16.3-16.1
pathogenic|uncertain significance
GRCh38/hg38 4p16.3-15.32(chr4:37335-15869056)x1 copy number loss See cases [RCV000139551] Chr4:37335..15869056 [GRCh38]
Chr4:37336..15870679 [GRCh37]
Chr4:27336..15479777 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-15.32(chr4:4426403-17460549)x1 copy number loss See cases [RCV000141502] Chr4:4426403..17460549 [GRCh38]
Chr4:4428130..17462172 [GRCh37]
Chr4:4479031..17071270 [NCBI36]
Chr4:4p16.3-15.32
pathogenic
GRCh38/hg38 4p16.3-16.1(chr4:68453-8730129)x1 copy number loss See cases [RCV000143377] Chr4:68453..8730129 [GRCh38]
Chr4:68345..8731855 [GRCh37]
Chr4:58345..8782755 [NCBI36]
Chr4:4p16.3-16.1
pathogenic
GRCh38/hg38 4p16.3-15.31(chr4:68453-20385608)x1 copy number loss See cases [RCV000143713] Chr4:68453..20385608 [GRCh38]
Chr4:68345..20387231 [GRCh37]
Chr4:58345..19996329 [NCBI36]
Chr4:4p16.3-15.31
pathogenic
GRCh38/hg38 4p16.3-15.33(chr4:68453-14612453)x1 copy number loss See cases [RCV000143686] Chr4:68453..14612453 [GRCh38]
Chr4:68345..14614077 [GRCh37]
Chr4:58345..14223175 [NCBI36]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.3-15.31(chr4:44020-19796182)x1 copy number loss See cases [RCV000203431] Chr4:44020..19796182 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:75742-8672411) copy number loss 4p partial monosomy syndrome [RCV000767672] Chr4:75742..8672411 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-15.1(chr4:71552-29006745)x1 copy number loss See cases [RCV000240003] Chr4:71552..29006745 [GRCh37]
Chr4:4p16.3-15.1
pathogenic
GRCh37/hg19 4p16.1-15.31(chr4:6447048-20490737)x3 copy number gain See cases [RCV000240007] Chr4:6447048..20490737 [GRCh37]
Chr4:4p16.1-15.31
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:49450-8872474)x1 copy number loss See cases [RCV000239427] Chr4:49450..8872474 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-11(chr4:12440-49064044)x3 copy number gain See cases [RCV000240562] Chr4:12440..49064044 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:127233-8667610)x3 copy number gain See cases [RCV000240481] Chr4:127233..8667610 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-11(chr4:68345-49089361)x3 copy number gain not specified [RCV003986479] Chr4:68345..49089361 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-11(chr4:68345-49089361)x3 copy number gain See cases [RCV002292704] Chr4:68345..49089361 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-15.31(chr4:68345-20533787)x1 copy number loss See cases [RCV000449197] Chr4:68345..20533787 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.3-15.33(chr4:68345-15197147)x1 copy number loss See cases [RCV000446287] Chr4:68345..15197147 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.3-11(chr4:68345-49093788)x3 copy number gain See cases [RCV000446451] Chr4:68345..49093788 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:12440-190904441)x3 copy number gain See cases [RCV000446653] Chr4:12440..190904441 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:68345-8731855)x3 copy number gain See cases [RCV000447633] Chr4:68345..8731855 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-15.32(chr4:71552-15302739)x1 copy number loss See cases [RCV000448933] Chr4:71552..15302739 [GRCh37]
Chr4:4p16.3-15.32
pathogenic
GRCh37/hg19 4p16.1(chr4:8199982-8731855)x3 copy number gain See cases [RCV000512078] Chr4:8199982..8731855 [GRCh37]
Chr4:4p16.1
likely benign
GRCh37/hg19 4p16.3-16.1(chr4:68345-10336032)x1 copy number loss See cases [RCV000512104] Chr4:68345..10336032 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-15.32(chr4:68345-15973383)x1 copy number loss See cases [RCV000510662] Chr4:68345..15973383 [GRCh37]
Chr4:4p16.3-15.32
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473) copy number gain See cases [RCV000510453] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:68345-8731855)x3 copy number gain See cases [RCV000510565] Chr4:68345..8731855 [GRCh37]
Chr4:4p16.3-16.1
likely pathogenic
GRCh37/hg19 4p16.3-15.33(chr4:68345-13770107)x1 copy number loss See cases [RCV000511351] Chr4:68345..13770107 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.3-q13.1(chr4:68345-66440622)x3 copy number gain See cases [RCV000511193] Chr4:68345..66440622 [GRCh37]
Chr4:4p16.3-q13.1
pathogenic
NM_003501.3(ACOX3):c.1747T>G (p.Ser583Ala) single nucleotide variant Inborn genetic diseases [RCV003242097] Chr4:8375059 [GRCh38]
Chr4:8376786 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1753C>T (p.Arg585Trp) single nucleotide variant Inborn genetic diseases [RCV003282102] Chr4:8375053 [GRCh38]
Chr4:8376780 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473)x3 copy number gain See cases [RCV000512241] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
NM_003501.3(ACOX3):c.1698G>C (p.Thr566=) single nucleotide variant not provided [RCV000676031] Chr4:8375108 [GRCh38]
Chr4:8376835 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.1266C>T (p.Cys422=) single nucleotide variant not provided [RCV000676035] Chr4:8392367 [GRCh38]
Chr4:8394094 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.873+23G>A single nucleotide variant not provided [RCV000676036] Chr4:8399533 [GRCh38]
Chr4:8401260 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.448A>C (p.Met150Leu) single nucleotide variant not provided [RCV000676037] Chr4:8414859 [GRCh38]
Chr4:8416586 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.378+11G>A single nucleotide variant not provided [RCV000676038] Chr4:8415755 [GRCh38]
Chr4:8417482 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1897-6C>T single nucleotide variant not provided [RCV000676029] Chr4:8371000 [GRCh38]
Chr4:8372727 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.1653+4A>C single nucleotide variant not provided [RCV000676032] Chr4:8381488 [GRCh38]
Chr4:8383215 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.1842C>T (p.Ser614=) single nucleotide variant not provided [RCV000676030] Chr4:8373615 [GRCh38]
Chr4:8375342 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.1439G>C (p.Arg480Pro) single nucleotide variant not provided [RCV000676034] Chr4:8389271 [GRCh38]
Chr4:8390998 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.101A>C (p.Glu34Ala) single nucleotide variant not provided [RCV000676039] Chr4:8416421 [GRCh38]
Chr4:8418148 [GRCh37]
Chr4:4p16.1
benign
GRCh37/hg19 4p16.3-11(chr4:68345-49089361)x3 copy number gain not provided [RCV000682363] Chr4:68345..49089361 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-15.1(chr4:4165334-33324781)x1 copy number loss not provided [RCV000682373] Chr4:4165334..33324781 [GRCh37]
Chr4:4p16.3-15.1
pathogenic
GRCh37/hg19 4p16.1(chr4:8313806-8569066)x3 copy number gain not provided [RCV000682379] Chr4:8313806..8569066 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:8349533-8446629)x1 copy number loss not provided [RCV000682380] Chr4:8349533..8446629 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:8373601-8496780)x1 copy number loss not provided [RCV000682381] Chr4:8373601..8496780 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1489G>A (p.Asp497Asn) single nucleotide variant not provided [RCV000676033] Chr4:8389221 [GRCh38]
Chr4:8390948 [GRCh37]
Chr4:4p16.1
benign
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190915650)x3 copy number gain not provided [RCV000743155] Chr4:49450..190915650 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190963766)x3 copy number gain not provided [RCV000743156] Chr4:49450..190963766 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:11525-191028879)x3 copy number gain not provided [RCV000743147] Chr4:11525..191028879 [GRCh37]
Chr4:4p16.3-q35.2
pathogenic
GRCh37/hg19 4p16.3-11(chr4:1356924-49659859)x3 copy number gain not provided [RCV000743201] Chr4:1356924..49659859 [GRCh37]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-12(chr4:49450-46339070)x3 copy number gain not provided [RCV000743154] Chr4:49450..46339070 [GRCh37]
Chr4:4p16.3-12
pathogenic
NM_003501.3(ACOX3):c.1814C>T (p.Ala605Val) single nucleotide variant not provided [RCV001812969] Chr4:8374992 [GRCh38]
Chr4:8376719 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1215G>A (p.Ser405=) single nucleotide variant not provided [RCV000905919] Chr4:8392418 [GRCh38]
Chr4:8394145 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.225C>T (p.Arg75=) single nucleotide variant not provided [RCV000905920] Chr4:8415919 [GRCh38]
Chr4:8417646 [GRCh37]
Chr4:4p16.1
likely benign
NC_000004.12:g.8398067_17505522inv inversion Dihydropteridine reductase deficiency [RCV000768549] Chr4:8398067..17505522 [GRCh38]
Chr4:4p16.1-15.32
pathogenic
NM_003501.3(ACOX3):c.84G>A (p.Ala28=) single nucleotide variant not provided [RCV000881132] Chr4:8416438 [GRCh38]
Chr4:8418165 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.447G>A (p.Arg149=) single nucleotide variant not provided [RCV000916228] Chr4:8414860 [GRCh38]
Chr4:8416587 [GRCh37]
Chr4:4p16.1
likely benign
GRCh37/hg19 4p16.3-15.33(chr4:3374195-13468480)x1 copy number loss not provided [RCV000845896] Chr4:3374195..13468480 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.1(chr4:8162995-8481259)x1 copy number loss not provided [RCV000847150] Chr4:8162995..8481259 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-16.1(chr4:68345-9768141)x1 copy number loss not provided [RCV001005511] Chr4:68345..9768141 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:68345-10312798)x1 copy number loss not provided [RCV001005514] Chr4:68345..10312798 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-15.2(chr4:49450-24280482)x1 copy number loss See cases [RCV001007422] Chr4:49450..24280482 [GRCh37]
Chr4:4p16.3-15.2
pathogenic
GRCh37/hg19 4p16.1(chr4:7336953-8620214)x3 copy number gain not provided [RCV000846952] Chr4:7336953..8620214 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.144+7C>T single nucleotide variant not provided [RCV000975030] Chr4:8416371 [GRCh38]
Chr4:8418098 [GRCh37]
Chr4:4p16.1
benign
GRCh37/hg19 4p16.2-15.32(chr4:5914109-17264668)x1 copy number loss not provided [RCV001005519] Chr4:5914109..17264668 [GRCh37]
Chr4:4p16.2-15.32
likely pathogenic
GRCh37/hg19 4p16.3-15.33(chr4:68346-12369983)x1 copy number loss not provided [RCV002473869] Chr4:68346..12369983 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.3-16.1(chr4:68345-8731855)x1 copy number loss not provided [RCV001005512] Chr4:68345..8731855 [GRCh37]
Chr4:4p16.3-16.1
pathogenic
GRCh37/hg19 4p16.3-15.2(chr4:68345-27423424)x3 copy number gain not provided [RCV001005510] Chr4:68345..27423424 [GRCh37]
Chr4:4p16.3-15.2
pathogenic
GRCh37/hg19 4p16.3-15.31(chr4:68598-18912995)x1 copy number loss not provided [RCV001537927] Chr4:68598..18912995 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.3-11(chr4:49450-49620898)x3 copy number gain See cases [RCV001194594] Chr4:49450..49620898 [GRCh37]
Chr4:4p16.3-11
pathogenic
NM_003501.3(ACOX3):c.311C>T (p.Pro104Leu) single nucleotide variant Inborn genetic diseases [RCV002541803]|not provided [RCV001810714] Chr4:8415833 [GRCh38]
Chr4:8417560 [GRCh37]
Chr4:4p16.1
likely benign|uncertain significance
GRCh37/hg19 4p16.3-15.1(chr4:69671-29702595)x3 copy number gain not provided [RCV001537928] Chr4:69671..29702595 [GRCh37]
Chr4:4p16.3-15.1
pathogenic
NM_003501.3(ACOX3):c.1580G>A (p.Arg527Gln) single nucleotide variant not provided [RCV001509234] Chr4:8381565 [GRCh38]
Chr4:8383292 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:7792998-8731855)x3 copy number gain not provided [RCV001832971] Chr4:7792998..8731855 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:8367623-8609785)x3 copy number gain not provided [RCV001834141] Chr4:8367623..8609785 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-15.31(chr4:68345-20587167)x1 copy number loss not provided [RCV001829146] Chr4:68345..20587167 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.1(chr4:8265830-8731855)x3 copy number gain not provided [RCV001833064] Chr4:8265830..8731855 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-15.31(chr4:68345-20964575)x1 copy number loss See cases [RCV002286359] Chr4:68345..20964575 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
NM_003501.3(ACOX3):c.1981G>A (p.Glu661Lys) single nucleotide variant Inborn genetic diseases [RCV003295148] Chr4:8370910 [GRCh38]
Chr4:8372637 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-12(chr4:114784-47569569)x3 copy number gain FETAL DEMISE [RCV002282978] Chr4:114784..47569569 [GRCh37]
Chr4:4p16.3-12
pathogenic
GRCh37/hg19 4p16.3-15.33(chr4:1-12785001)x1 copy number loss not provided [RCV002473938] Chr4:1..12785001 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.1(chr4:8234755-8731855)x3 copy number gain not provided [RCV002474653] Chr4:8234755..8731855 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.887G>A (p.Arg296His) single nucleotide variant Inborn genetic diseases [RCV002969760] Chr4:8397106 [GRCh38]
Chr4:8398833 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.923G>A (p.Arg308Gln) single nucleotide variant Inborn genetic diseases [RCV002685349] Chr4:8397070 [GRCh38]
Chr4:8398797 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.92G>A (p.Ser31Asn) single nucleotide variant Inborn genetic diseases [RCV002818808] Chr4:8416430 [GRCh38]
Chr4:8418157 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1769G>A (p.Arg590Gln) single nucleotide variant Inborn genetic diseases [RCV002687672] Chr4:8375037 [GRCh38]
Chr4:8376764 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1663G>A (p.Gly555Ser) single nucleotide variant Inborn genetic diseases [RCV002773899] Chr4:8375143 [GRCh38]
Chr4:8376870 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.74G>A (p.Arg25Gln) single nucleotide variant Inborn genetic diseases [RCV002797703] Chr4:8416448 [GRCh38]
Chr4:8418175 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1267C>T (p.Arg423Trp) single nucleotide variant Inborn genetic diseases [RCV002762339] Chr4:8392366 [GRCh38]
Chr4:8394093 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.598A>G (p.Met200Val) single nucleotide variant Inborn genetic diseases [RCV002661354] Chr4:8410301 [GRCh38]
Chr4:8412028 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1145G>A (p.Arg382Gln) single nucleotide variant Inborn genetic diseases [RCV002661915] Chr4:8394654 [GRCh38]
Chr4:8396381 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1093G>A (p.Ala365Thr) single nucleotide variant Inborn genetic diseases [RCV002660124] Chr4:8394706 [GRCh38]
Chr4:8396433 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.370C>T (p.His124Tyr) single nucleotide variant Inborn genetic diseases [RCV002662325] Chr4:8415774 [GRCh38]
Chr4:8417501 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.529G>A (p.Asp177Asn) single nucleotide variant Inborn genetic diseases [RCV002660260] Chr4:8414306 [GRCh38]
Chr4:8416033 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.452A>T (p.Glu151Val) single nucleotide variant Inborn genetic diseases [RCV002782132] Chr4:8414855 [GRCh38]
Chr4:8416582 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.511C>G (p.Arg171Gly) single nucleotide variant Inborn genetic diseases [RCV002691402] Chr4:8414324 [GRCh38]
Chr4:8416051 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.2060C>T (p.Ser687Phe) single nucleotide variant Inborn genetic diseases [RCV002956384] Chr4:8367004 [GRCh38]
Chr4:8368731 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.766C>A (p.Leu256Met) single nucleotide variant Inborn genetic diseases [RCV002893276] Chr4:8405965 [GRCh38]
Chr4:8407692 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.854C>T (p.Thr285Ile) single nucleotide variant Inborn genetic diseases [RCV002985894] Chr4:8399575 [GRCh38]
Chr4:8401302 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.2002G>A (p.Gly668Ser) single nucleotide variant Inborn genetic diseases [RCV002804532] Chr4:8367062 [GRCh38]
Chr4:8368789 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.130A>C (p.Met44Leu) single nucleotide variant Inborn genetic diseases [RCV002709751] Chr4:8416392 [GRCh38]
Chr4:8418119 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1663G>C (p.Gly555Arg) single nucleotide variant Inborn genetic diseases [RCV002874565] Chr4:8375143 [GRCh38]
Chr4:8376870 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.185C>T (p.Ala62Val) single nucleotide variant Inborn genetic diseases [RCV002893433] Chr4:8415959 [GRCh38]
Chr4:8417686 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1534G>A (p.Ala512Thr) single nucleotide variant Inborn genetic diseases [RCV002981837] Chr4:8389176 [GRCh38]
Chr4:8390903 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1165C>T (p.Arg389Cys) single nucleotide variant Inborn genetic diseases [RCV002813531] Chr4:8394634 [GRCh38]
Chr4:8396361 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1666C>T (p.Arg556Cys) single nucleotide variant Inborn genetic diseases [RCV002966029] Chr4:8375140 [GRCh38]
Chr4:8376867 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.763G>A (p.Gly255Ser) single nucleotide variant Inborn genetic diseases [RCV002935319] Chr4:8405968 [GRCh38]
Chr4:8407695 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1574T>C (p.Leu525Pro) single nucleotide variant Inborn genetic diseases [RCV002944771] Chr4:8381571 [GRCh38]
Chr4:8383298 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.934G>A (p.Val312Met) single nucleotide variant Inborn genetic diseases [RCV003254374] Chr4:8397059 [GRCh38]
Chr4:8398786 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.313G>A (p.Ala105Thr) single nucleotide variant Inborn genetic diseases [RCV003297747] Chr4:8415831 [GRCh38]
Chr4:8417558 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.877G>A (p.Val293Ile) single nucleotide variant Inborn genetic diseases [RCV003197127] Chr4:8397116 [GRCh38]
Chr4:8398843 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.740T>C (p.Ile247Thr) single nucleotide variant Inborn genetic diseases [RCV003196897] Chr4:8405991 [GRCh38]
Chr4:8407718 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.546A>T (p.Glu182Asp) single nucleotide variant Inborn genetic diseases [RCV003208669] Chr4:8410353 [GRCh38]
Chr4:8412080 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1876G>A (p.Val626Ile) single nucleotide variant Inborn genetic diseases [RCV003183774] Chr4:8373581 [GRCh38]
Chr4:8375308 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1613G>A (p.Arg538Lys) single nucleotide variant Inborn genetic diseases [RCV003209778] Chr4:8381532 [GRCh38]
Chr4:8383259 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1810G>T (p.Ala604Ser) single nucleotide variant Inborn genetic diseases [RCV003265840] Chr4:8374996 [GRCh38]
Chr4:8376723 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.3-15.1(chr4:68345-34512694) copy number gain 4p16.3 microduplication syndrome [RCV003319592] Chr4:68345..34512694 [GRCh37]
Chr4:4p16.3-15.1
pathogenic
GRCh38/hg38 4p16.3-q12(chr4:85624-57073230)x3 copy number gain Neurodevelopmental disorder [RCV003327613] Chr4:85624..57073230 [GRCh38]
Chr4:4p16.3-q12
pathogenic
GRCh38/hg38 4p16.3-13(chr4:2904667-42963232)x3 copy number gain Neurodevelopmental disorder [RCV003327612] Chr4:2904667..42963232 [GRCh38]
Chr4:4p16.3-13
pathogenic
GRCh38/hg38 4p16.3-11(chr4:1-49062177)x3 copy number gain Neurodevelopmental disorder [RCV003327611] Chr4:1..49062177 [GRCh38]
Chr4:4p16.3-11
pathogenic
GRCh37/hg19 4p16.3-15.32(chr4:85622-16900108)x1 copy number loss not provided [RCV003334269] Chr4:85622..16900108 [GRCh37]
Chr4:4p16.3-15.32
pathogenic
NM_003501.3(ACOX3):c.1917C>T (p.Ala639=) single nucleotide variant Inborn genetic diseases [RCV003377211] Chr4:8370974 [GRCh38]
Chr4:8372701 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1925A>C (p.Asp642Ala) single nucleotide variant Inborn genetic diseases [RCV003364876] Chr4:8370966 [GRCh38]
Chr4:8372693 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.107C>T (p.Ala36Val) single nucleotide variant Inborn genetic diseases [RCV003351766] Chr4:8416415 [GRCh38]
Chr4:8418142 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:8379061-8620214)x1 copy number loss not provided [RCV003485411] Chr4:8379061..8620214 [GRCh37]
Chr4:4p16.1
uncertain significance
GRCh37/hg19 4p16.1(chr4:7810354-8620214)x3 copy number gain not provided [RCV003484170] Chr4:7810354..8620214 [GRCh37]
Chr4:4p16.1
uncertain significance
NM_003501.3(ACOX3):c.1404C>T (p.Leu468=) single nucleotide variant not provided [RCV003439253] Chr4:8389631 [GRCh38]
Chr4:8391358 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1848G>A (p.Glu616=) single nucleotide variant not provided [RCV003439252] Chr4:8373609 [GRCh38]
Chr4:8375336 [GRCh37]
Chr4:4p16.1
likely benign
NM_003501.3(ACOX3):c.1236G>A (p.Ser412=) single nucleotide variant not provided [RCV003439254] Chr4:8392397 [GRCh38]
Chr4:8394124 [GRCh37]
Chr4:4p16.1
likely benign
GRCh37/hg19 4p16.3-15.33(chr4:68345-14083766)x1 copy number loss not specified [RCV003986510] Chr4:68345..14083766 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
GRCh37/hg19 4p16.3-15.31(chr4:68345-21143236)x1 copy number loss not specified [RCV003986488] Chr4:68345..21143236 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.3-15.31(chr4:68345-19103550)x1 copy number loss not specified [RCV003986512] Chr4:68345..19103550 [GRCh37]
Chr4:4p16.3-15.31
pathogenic
GRCh37/hg19 4p16.3-15.33(chr4:85622-13316942)x1 copy number loss not provided [RCV003885506] Chr4:85622..13316942 [GRCh37]
Chr4:4p16.3-15.33
pathogenic
NM_003501.3(ACOX3):c.445A>G (p.Arg149Gly) single nucleotide variant not provided [RCV003885845] Chr4:8414862 [GRCh38]
Chr4:8416589 [GRCh37]
Chr4:4p16.1
benign
NM_003501.3(ACOX3):c.259G>C (p.Glu87Gln) single nucleotide variant not provided [RCV003886833] Chr4:8415885 [GRCh38]
Chr4:8417612 [GRCh37]
Chr4:4p16.1
uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1673
Count of miRNA genes:834
Interacting mature miRNAs:983
Transcripts:ENST00000356406, ENST00000413009, ENST00000503233, ENST00000508302, ENST00000510365, ENST00000512411, ENST00000514423, ENST00000515797
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-32080  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,368,167 - 8,368,316UniSTSGRCh37
Build 3648,419,067 - 8,419,216RGDNCBI36
Celera48,261,479 - 8,261,628RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,287,522 - 8,287,671UniSTS
TNG Radiation Hybrid Map45136.0UniSTS
GeneMap99-GB4 RH Map454.27UniSTS
Whitehead-RH Map448.9UniSTS
GeneMap99-G3 RH Map4700.0UniSTS
D4S1213  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,405,118 - 8,405,316UniSTSGRCh37
Build 3648,456,018 - 8,456,216RGDNCBI36
Celera48,298,421 - 8,298,619RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,324,995 - 8,325,193UniSTS
Stanford-G3 RH Map4699.0UniSTS
NCBI RH Map4102.4UniSTS
SHGC-149580  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,370,810 - 8,371,133UniSTSGRCh37
Build 3648,421,710 - 8,422,033RGDNCBI36
Celera48,264,124 - 8,264,447RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,290,168 - 8,290,491UniSTS
TNG Radiation Hybrid Map45136.0UniSTS
SHGC-149925  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,371,340 - 8,371,678UniSTSGRCh37
Build 3648,422,240 - 8,422,578RGDNCBI36
Celera48,264,654 - 8,264,992RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,290,698 - 8,291,036UniSTS
TNG Radiation Hybrid Map45132.0UniSTS
st517p6-8d3  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,395,306 - 8,395,569UniSTSGRCh37
Build 3648,446,206 - 8,446,469RGDNCBI36
Celera48,288,612 - 8,288,875RGD
HuRef48,314,507 - 8,314,770UniSTS
G19895  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,368,139 - 8,368,388UniSTSGRCh37
Build 3648,419,039 - 8,419,288RGDNCBI36
Celera48,261,451 - 8,261,700RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,287,494 - 8,287,743UniSTS
A002B29  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,368,139 - 8,368,388UniSTSGRCh37
Build 3648,419,039 - 8,419,288RGDNCBI36
Celera48,261,451 - 8,261,700RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,287,494 - 8,287,743UniSTS
GeneMap99-GB4 RH Map457.59UniSTS
G33926  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,374,435 - 8,374,678UniSTSGRCh37
Build 3648,425,335 - 8,425,578RGDNCBI36
Celera48,267,749 - 8,267,992RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,293,793 - 8,294,036UniSTS
D4S1188  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh3748,374,509 - 8,374,658UniSTSGRCh37
Build 3648,425,409 - 8,425,558RGDNCBI36
Celera48,267,823 - 8,267,972RGD
Cytogenetic Map4p15.3UniSTS
HuRef48,293,867 - 8,294,016UniSTS
TNG Radiation Hybrid Map45149.0UniSTS
G65142  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4p15.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High
Medium 1891 1591 1086 376 805 222 3253 952 816 199 916 1307 164 916 1890 4
Low 548 1388 640 248 1137 243 1103 1242 2918 220 544 306 11 1 288 898 2 2
Below cutoff 12 9 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001101667 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375786 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375788 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375789 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001375790 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_003501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011513566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454237 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416230 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054350950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007057968 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007057969 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007057970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007057971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_007057972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487034 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487038 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487039 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_008487041 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_925000 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC104825 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK225080 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313242 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC017053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA306669 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471131 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA949869 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB873065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB882927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HB894256 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC930474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC940336 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HC951665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF457738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y11411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENST00000356406   ⟹   ENSP00000348775
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,366,282 - 8,440,723 (-)Ensembl
RefSeq Acc Id: ENST00000413009   ⟹   ENSP00000413994
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,366,712 - 8,440,723 (-)Ensembl
RefSeq Acc Id: ENST00000503233   ⟹   ENSP00000421625
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,366,961 - 8,428,486 (-)Ensembl
RefSeq Acc Id: ENST00000508302
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,381,554 - 8,394,891 (-)Ensembl
RefSeq Acc Id: ENST00000510365
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,374,468 - 8,415,855 (-)Ensembl
RefSeq Acc Id: ENST00000512411
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,366,712 - 8,373,815 (-)Ensembl
RefSeq Acc Id: ENST00000514423   ⟹   ENSP00000427321
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,410,282 - 8,428,461 (-)Ensembl
RefSeq Acc Id: ENST00000515797
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl48,366,712 - 8,374,167 (-)Ensembl
RefSeq Acc Id: NM_001101667   ⟹   NP_001095137
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
GRCh3748,368,009 - 8,442,452 (-)RGD
Build 3648,418,909 - 8,493,352 (-)NCBI Archive
Celera48,261,321 - 8,335,759 (-)RGD
HuRef48,287,364 - 8,362,315 (-)RGD
CHM1_148,366,366 - 8,440,788 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375783   ⟹   NP_001362712
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375784   ⟹   NP_001362713
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375785   ⟹   NP_001362714
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375786   ⟹   NP_001362715
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375787   ⟹   NP_001362716
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375788   ⟹   NP_001362717
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375789   ⟹   NP_001362718
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001375790   ⟹   NP_001362719
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
Sequence:
RefSeq Acc Id: NM_003501   ⟹   NP_003492
RefSeq Status: VALIDATED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
GRCh3748,368,009 - 8,442,452 (-)RGD
Build 3648,418,909 - 8,493,352 (-)NCBI Archive
Celera48,261,321 - 8,335,759 (-)RGD
HuRef48,287,364 - 8,362,315 (-)RGD
CHM1_148,366,366 - 8,440,788 (-)NCBI
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513565   ⟹   XP_011511867
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,435,967 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011513566   ⟹   XP_011511868
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,428,448 (-)NCBI
Sequence:
RefSeq Acc Id: XM_024454237   ⟹   XP_024310005
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,386,142 - 8,428,448 (-)NCBI
Sequence:
RefSeq Acc Id: XM_047416229   ⟹   XP_047272185
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
RefSeq Acc Id: XM_047416230   ⟹   XP_047272186
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
RefSeq Acc Id: XM_047416231   ⟹   XP_047272187
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,366,282 - 8,440,723 (-)NCBI
RefSeq Acc Id: XM_047416233   ⟹   XP_047272189
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,386,142 - 8,440,723 (-)NCBI
RefSeq Acc Id: XM_047416234   ⟹   XP_047272190
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,386,142 - 8,428,448 (-)NCBI
RefSeq Acc Id: XM_054350944   ⟹   XP_054206919
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,416,491 (-)NCBI
RefSeq Acc Id: XM_054350945   ⟹   XP_054206920
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
RefSeq Acc Id: XM_054350946   ⟹   XP_054206921
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,416,490 (-)NCBI
RefSeq Acc Id: XM_054350947   ⟹   XP_054206922
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,412,032 (-)NCBI
RefSeq Acc Id: XM_054350948   ⟹   XP_054206923
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
RefSeq Acc Id: XM_054350949   ⟹   XP_054206924
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,408,193 (-)NCBI
RefSeq Acc Id: XM_054350950   ⟹   XP_054206925
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,346,177 - 8,420,469 (-)NCBI
RefSeq Acc Id: XR_007057968
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,355,305 - 8,428,448 (-)NCBI
RefSeq Acc Id: XR_007057969
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,355,305 - 8,440,723 (-)NCBI
RefSeq Acc Id: XR_007057970
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,355,305 - 8,428,448 (-)NCBI
RefSeq Acc Id: XR_007057971
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,370,908 - 8,428,448 (-)NCBI
RefSeq Acc Id: XR_007057972
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,386,142 - 8,428,448 (-)NCBI
RefSeq Acc Id: XR_008487034
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,337,453 - 8,408,193 (-)NCBI
RefSeq Acc Id: XR_008487035
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,337,453 - 8,420,469 (-)NCBI
RefSeq Acc Id: XR_008487036
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,337,453 - 8,408,193 (-)NCBI
RefSeq Acc Id: XR_008487037
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,350,805 - 8,408,193 (-)NCBI
RefSeq Acc Id: XR_008487038
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,361,445 - 8,408,193 (-)NCBI
RefSeq Acc Id: XR_008487039
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,361,445 - 8,408,193 (-)NCBI
RefSeq Acc Id: XR_008487040
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,361,445 - 8,420,469 (-)NCBI
RefSeq Acc Id: XR_008487041
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.048,361,445 - 8,408,193 (-)NCBI
Protein Sequences
Protein RefSeqs NP_001095137 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362712 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362713 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362714 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362715 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362716 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362717 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362718 (Get FASTA)   NCBI Sequence Viewer  
  NP_001362719 (Get FASTA)   NCBI Sequence Viewer  
  NP_003492 (Get FASTA)   NCBI Sequence Viewer  
  XP_011511867 (Get FASTA)   NCBI Sequence Viewer  
  XP_011511868 (Get FASTA)   NCBI Sequence Viewer  
  XP_024310005 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272185 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272186 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272187 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272189 (Get FASTA)   NCBI Sequence Viewer  
  XP_047272190 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206919 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206920 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206921 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206922 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206923 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206924 (Get FASTA)   NCBI Sequence Viewer  
  XP_054206925 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAH17053 (Get FASTA)   NCBI Sequence Viewer  
  BAG36053 (Get FASTA)   NCBI Sequence Viewer  
  CAA72214 (Get FASTA)   NCBI Sequence Viewer  
  CBF60575 (Get FASTA)   NCBI Sequence Viewer  
  CBF65729 (Get FASTA)   NCBI Sequence Viewer  
  CBF73112 (Get FASTA)   NCBI Sequence Viewer  
  CBU85819 (Get FASTA)   NCBI Sequence Viewer  
  CBU90600 (Get FASTA)   NCBI Sequence Viewer  
  CBU96016 (Get FASTA)   NCBI Sequence Viewer  
  EAW82339 (Get FASTA)   NCBI Sequence Viewer  
  EAW82340 (Get FASTA)   NCBI Sequence Viewer  
  EAW82341 (Get FASTA)   NCBI Sequence Viewer  
  EAW82342 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSP00000348775
  ENSP00000348775.4
  ENSP00000413994
  ENSP00000413994.2
  ENSP00000421625
  ENSP00000421625.1
  ENSP00000427321.1
GenBank Protein O15254 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_003492   ⟸   NM_003501
- Peptide Label: isoform a
- UniProtKB: Q96AJ8 (UniProtKB/Swiss-Prot),   O15254 (UniProtKB/Swiss-Prot),   B2R856 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001095137   ⟸   NM_001101667
- Peptide Label: isoform b
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011511868   ⟸   XM_011513566
- Peptide Label: isoform X2
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011511867   ⟸   XM_011513565
- Peptide Label: isoform X1
- UniProtKB: Q96AJ8 (UniProtKB/Swiss-Prot),   O15254 (UniProtKB/Swiss-Prot),   B2R856 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024310005   ⟸   XM_024454237
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: NP_001362713   ⟸   NM_001375784
- Peptide Label: isoform c
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362714   ⟸   NM_001375785
- Peptide Label: isoform d
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362718   ⟸   NM_001375789
- Peptide Label: isoform f
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362717   ⟸   NM_001375788
- Peptide Label: isoform b
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362715   ⟸   NM_001375786
- Peptide Label: isoform d
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362716   ⟸   NM_001375787
- Peptide Label: isoform e
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362712   ⟸   NM_001375783
- Peptide Label: isoform a
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot),   B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: NP_001362719   ⟸   NM_001375790
- Peptide Label: isoform g
- UniProtKB: B2R856 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSP00000421625   ⟸   ENST00000503233
RefSeq Acc Id: ENSP00000413994   ⟸   ENST00000413009
RefSeq Acc Id: ENSP00000348775   ⟸   ENST00000356406
RefSeq Acc Id: ENSP00000427321   ⟸   ENST00000514423
RefSeq Acc Id: XP_047272187   ⟸   XM_047416231
- Peptide Label: isoform X2
RefSeq Acc Id: XP_047272186   ⟸   XM_047416230
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047272185   ⟸   XM_047416229
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_047272189   ⟸   XM_047416233
- Peptide Label: isoform X3
RefSeq Acc Id: XP_047272190   ⟸   XM_047416234
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054206925   ⟸   XM_054350950
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054206923   ⟸   XM_054350948
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054206920   ⟸   XM_054350945
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054206919   ⟸   XM_054350944
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054206921   ⟸   XM_054350946
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054206922   ⟸   XM_054350947
- Peptide Label: isoform X1
- UniProtKB: O15254 (UniProtKB/Swiss-Prot),   Q96AJ8 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: XP_054206924   ⟸   XM_054350949
- Peptide Label: isoform X2
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-O15254-F1-model_v2 AlphaFold O15254 1-700 view protein structure

Promoters
RGD ID:6867012
Promoter ID:EPDNEW_H6671
Type:initiation region
Name:ACOX3_1
Description:acyl-CoA oxidase 3, pristanoyl
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6673  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,428,448 - 8,428,508EPDNEW
RGD ID:6867016
Promoter ID:EPDNEW_H6673
Type:initiation region
Name:ACOX3_2
Description:acyl-CoA oxidase 3, pristanoyl
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H6671  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh3848,440,723 - 8,440,783EPDNEW
RGD ID:6802020
Promoter ID:HG_KWN:47834
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   K562,   Lymphoblastoid,   NB4
Transcripts:UC010IDK.1
Position:
Human AssemblyChrPosition (strand)Source
Build 3648,480,791 - 8,481,291 (-)MPROMDB
RGD ID:6802019
Promoter ID:HG_KWN:47836
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   HeLa_S3,   Jurkat,   Lymphoblastoid
Transcripts:NM_001101667,   NM_003501
Position:
Human AssemblyChrPosition (strand)Source
Build 3648,493,281 - 8,493,942 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:121 AgrOrtholog
COSMIC ACOX3 COSMIC
Ensembl Genes ENSG00000087008 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000356406 ENTREZGENE
  ENST00000356406.10 UniProtKB/Swiss-Prot
  ENST00000413009 ENTREZGENE
  ENST00000413009.6 UniProtKB/Swiss-Prot
  ENST00000503233 ENTREZGENE
  ENST00000503233.5 UniProtKB/Swiss-Prot
  ENST00000514423.1 UniProtKB/TrEMBL
Gene3D-CATH 2.40.110.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Butyryl-CoA Dehydrogenase, subunit A, domain 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000087008 GTEx
HGNC ID HGNC:121 ENTREZGENE
Human Proteome Map ACOX3 Human Proteome Map
InterPro ACO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Acyl-CoA_Oxase/DH_cen-dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Acyl-CoA_Oxase/DH_mid-dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Acyl-CoA_oxidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Acyl-CoA_oxidase_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AcylCo_DH-like_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  AcylCoA_DH/oxidase_NM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:8310 UniProtKB/Swiss-Prot
NCBI Gene 8310 ENTREZGENE
OMIM 603402 OMIM
PANTHER PEROXISOMAL ACYL-COENZYME A OXIDASE 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10909 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam ACOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Acyl-CoA_dh_M UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA24445 PharmGKB
PIRSF Acyl-CoA_oxidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Acyl-CoA dehydrogenase C-terminal domain-like UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
  SSF56645 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ACOX3_HUMAN UniProtKB/Swiss-Prot
  B2R856 ENTREZGENE, UniProtKB/TrEMBL
  D6RJ89_HUMAN UniProtKB/TrEMBL
  O15254 ENTREZGENE
  Q96AJ8 ENTREZGENE
UniProt Secondary Q96AJ8 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 ACOX3  acyl-CoA oxidase 3, pristanoyl  ACOX3  acyl-Coenzyme A oxidase 3, pristanoyl  Symbol and/or name change 5135510 APPROVED