Pemt (phosphatidylethanolamine N-methyltransferase) - Rat Genome Database
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Gene: Pemt (phosphatidylethanolamine N-methyltransferase) Mus musculus
Analyze
Symbol: Pemt
Name: phosphatidylethanolamine N-methyltransferase
RGD ID: 736786
MGI Page MGI
Description: Is expressed in several structures, including central nervous system; early conceptus; liver; lung; and secondary oocyte. Orthologous to human PEMT (phosphatidylethanolamine N-methyltransferase); PARTICIPATES IN choline metabolic pathway; glycerophospholipid metabolic pathway; homocysteine metabolic pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 2,3,7,8-tetrachlorodibenzodioxine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI255394; D9Mgi2; PEAMT; Pem; Pemp; Pempt; Pempt2; PEMT2; phospholipid methyltransferase; PLMT
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,861,440 - 59,937,394 (-)NCBIGRCm39mm39
GRCm39 Ensembl1159,861,440 - 59,937,315 (-)Ensembl
GRCm381159,970,614 - 60,046,561 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,970,614 - 60,046,489 (-)EnsemblGRCm38mm10GRCm38
MGSCv371159,784,119 - 59,850,341 (-)NCBIGRCm37mm9NCBIm37
MGSCv361159,786,812 - 59,853,034 (-)NCBImm8
MGSCv361160,507,197 - 60,573,128 (-)NCBImm8
Cytogenetic Map11B1.3NCBI
cM Map1137.81NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (ISO)
Aroclor 1254  (EXP)
arsane  (ISO)
arsenic atom  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
bisphenol A  (EXP,ISO)
carbon nanotube  (EXP)
choline  (ISO)
clofibrate  (EXP)
clofibric acid  (ISO)
cobalt dichloride  (ISO)
cyanocob(III)alamin  (ISO)
cyclosporin A  (EXP,ISO)
doxorubicin  (ISO)
ethyl methanesulfonate  (ISO)
fenofibrate  (ISO)
folic acid  (EXP,ISO)
formaldehyde  (ISO)
fructose  (EXP)
GW 4064  (EXP)
methamphetamine  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
mifepristone  (ISO)
monosodium L-glutamate  (EXP)
N-nitrosodiethylamine  (ISO)
nimesulide  (ISO)
p-toluidine  (ISO)
paracetamol  (EXP,ISO)
perfluorooctanoic acid  (EXP)
phosphatidylcholine  (EXP,ISO)
pirinixic acid  (EXP,ISO)
potassium chromate  (ISO)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (ISO)
S-adenosyl-L-homocysteine  (EXP)
S-adenosyl-L-methioninate  (EXP)
S-adenosyl-L-methionine  (EXP)
sarin  (ISO)
SCH 23390  (ISO)
streptozocin  (EXP,ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (EXP,ISO)
troglitazone  (EXP,ISO)
valproic acid  (ISO)
vitamin E  (ISO)
zaragozic acid A  (EXP,ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

References

Additional References at PubMed
PMID:8978486   PMID:9339368   PMID:9371769   PMID:9765216   PMID:10198162   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11773510   PMID:12193594  
PMID:12466019   PMID:12477932   PMID:12482759   PMID:12668679   PMID:12837848   PMID:14608048   PMID:14610273   PMID:14651853   PMID:14681479   PMID:14691545   PMID:15063092   PMID:15164765  
PMID:15798219   PMID:15836921   PMID:16141072   PMID:16141073   PMID:16144842   PMID:16602821   PMID:16679290   PMID:17273973   PMID:17283071   PMID:17456783   PMID:17595447   PMID:17881348  
PMID:18842588   PMID:19520976   PMID:19889625   PMID:20150657   PMID:20452975   PMID:21273556   PMID:21292027   PMID:21454708   PMID:21873635   PMID:22610093   PMID:22877991   PMID:23179947  
PMID:24667182   PMID:24677714   PMID:25463480   PMID:25667419   PMID:26113536   PMID:26391255   PMID:26603903   PMID:26797396   PMID:26883167   PMID:27181051   PMID:27869233   PMID:28159867  
PMID:28291718   PMID:29688375   PMID:30300671   PMID:30615497   PMID:31355949   PMID:31918922   PMID:32502648  


Genomics

Comparative Map Data
Pemt
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391159,861,440 - 59,937,394 (-)NCBIGRCm39mm39
GRCm39 Ensembl1159,861,440 - 59,937,315 (-)Ensembl
GRCm381159,970,614 - 60,046,561 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1159,970,614 - 60,046,489 (-)EnsemblGRCm38mm10GRCm38
MGSCv371159,784,119 - 59,850,341 (-)NCBIGRCm37mm9NCBIm37
MGSCv361159,786,812 - 59,853,034 (-)NCBImm8
MGSCv361160,507,197 - 60,573,128 (-)NCBImm8
Cytogenetic Map11B1.3NCBI
cM Map1137.81NCBI
PEMT
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1717,505,563 - 17,591,708 (-)EnsemblGRCh38hg38GRCh38
GRCh381717,505,561 - 17,591,987 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371717,408,877 - 17,495,022 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361717,349,602 - 17,435,719 (-)NCBINCBI36hg18NCBI36
Build 341717,349,603 - 17,421,504NCBI
Celera1718,348,298 - 18,434,406 (-)NCBI
Cytogenetic Map17p11.2NCBI
HuRef1717,161,232 - 17,247,817 (-)NCBIHuRef
CHM1_11717,417,546 - 17,503,772 (-)NCBICHM1_1
Pemt
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21044,775,910 - 44,849,990 (-)NCBI
Rnor_6.0 Ensembl1046,339,821 - 46,404,642 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01046,339,821 - 46,404,640 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01046,096,652 - 46,161,545 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.11046,313,743 - 46,316,512 (-)NCBI
Celera1044,035,617 - 44,101,504 (-)NCBICelera
Cytogenetic Map10q22NCBI
Pemt
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955577367,288 - 443,138 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955577365,031 - 443,138 (+)NCBIChiLan1.0ChiLan1.0
PEMT
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11738,651,026 - 38,737,202 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1738,651,024 - 38,737,202 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01733,703,800 - 33,790,470 (+)NCBIMhudiblu_PPA_v0panPan3
PEMT
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl541,872,108 - 41,960,828 (+)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1541,871,685 - 41,960,831 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Pemt
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367411,131,792 - 1,207,460 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PEMT
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.11260,880,367 - 60,919,279 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21263,139,567 - 63,158,686 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PEMT
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11616,540,096 - 16,626,251 (-)NCBI
ChlSab1.1 Ensembl1616,539,985 - 16,611,279 (-)Ensembl
Pemt
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248493,818,115 - 3,907,250 (+)NCBI

Position Markers
Pemt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B1.3UniSTS
cM Map1131.0UniSTS
AI255394  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381159,970,829 - 59,971,220UniSTSGRCm38
MGSCv371159,784,331 - 59,784,722UniSTSGRCm37
Cytogenetic Map11B1.3UniSTS
Pemt  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11B1.3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11330000060800000Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11330000063000000Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11330000072800000Mouse
13208559Wght10_mweight 10 (mouse)11400000089000000Mouse
13208558Lgth12_mbody length 12 (mouse)11400000095000000Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11693027789128908Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11890000061500000Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111160000068600000Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111180000066100000Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1231863768609504Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111231863768609504Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111231863768609504Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1231863768609504Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1231863768609504Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111231863768609504Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1231863768609504Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1231863768609504Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1231863768609504Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111231863768609504Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111231863768609504Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111231863769794121Mouse
1357859Lvrq7_mliver weight QTL 7 (mouse)Not determined1112318637118131898Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112318637118131898Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111710617567187585Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111783196668609504Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1917420497007000Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112185736495990405Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112827504662275149Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112867832062678320Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112881775462817873Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113111738265117382Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113220975066209867Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113568778969794161Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113600000085000000Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113639175083590530Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113661246070618665Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113672273870723028Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113719011571190238Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113787775360511890Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113812528972125383Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114236579176365904Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114236579176365904Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114473921176963931Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44739211113167183Mouse
4141000Nidd3_mnon-insulin-dependent diabetes mellitus 3 (mouse)Not determined4515120179151308Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114527504680087498Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114581775489927907Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114629434180294436Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114642858180428696Mouse
1301830Ssta4_msusceptibility to Salmonella typhimurium antigens 4 (mouse)Not determined115018736584187585Mouse
13524840Ppiq9a_mprepulse inhibition QTL 9a (mouse)115260355986603559Mouse
1300774Pgia7_mproteoglycan induced arthritis 7 (mouse)Not determined115349976287499911Mouse
4141084Spqq1_msperm quality QTL 1 (mouse)Not determined5417484463428696Mouse
1302186Blmpf2_mbleomycin-induced pulmonary fibrosis 2 (mouse)Not determined115417484467187585Mouse
4142148Ckdbp2_mchronic kidney disease blood pressure locus 2 (mouse)Not determined115419011565213015Mouse
4141830Pregq1_mpregnancy QTL 1 (mouse)Not determined115423592683842826Mouse
4141875Etax9_methanol induced ataxia 9 (mouse)Not determined5539415972319101Mouse
4142121Tmc1m2_mTmc1 modifier 2 (mouse)Not determined1156973201114267131Mouse
1300664Etohcta9_methanol conditioned taste aversion 9 (mouse)Not determined115786383491863932Mouse
10053682Eae45_mexperimental allergic encephalomyelitis susceptibility 45 (mouse)Not determined115859972974863932Mouse
1300924Ity2_mimmunity to S. typhimurium 2 (mouse)Not determined15861720487804412Mouse
4141982Skts-fp2_mskin tumor susceptibility in FVB and PWK 2 (mouse)Not determined5882844085175703Mouse
11532697Sluc36_msusceptibility to lung cancer 36 (mouse)115936579169591873Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1907
Count of miRNA genes:540
Interacting mature miRNAs:651
Transcripts:ENSMUST00000000310, ENSMUST00000102692, ENSMUST00000102693, ENSMUST00000133028, ENSMUST00000136660, ENSMUST00000143646, ENSMUST00000146461, ENSMUST00000147422, ENSMUST00000148512, ENSMUST00000150954
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001290011 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290012 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001290014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_008819 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA245746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH003114 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133744 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL603710 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL645526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY334571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY453863 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY453864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC026796 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG084478 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY251884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ048474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN708035 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000000310   ⟹   ENSMUSP00000000310
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,614 - 60,046,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000102692   ⟹   ENSMUSP00000099753
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,614 - 60,037,005 (-)Ensembl
RefSeq Acc Id: ENSMUST00000102693   ⟹   ENSMUSP00000099754
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,614 - 60,046,481 (-)Ensembl
RefSeq Acc Id: ENSMUST00000133028
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1160,044,545 - 60,046,485 (-)Ensembl
RefSeq Acc Id: ENSMUST00000136660
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,827 - 60,036,906 (-)Ensembl
RefSeq Acc Id: ENSMUST00000143646
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,976,859 - 60,021,226 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146461
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,976,879 - 59,983,740 (-)Ensembl
RefSeq Acc Id: ENSMUST00000147422   ⟹   ENSMUSP00000116314
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,844 - 60,040,169 (-)Ensembl
RefSeq Acc Id: ENSMUST00000148512   ⟹   ENSMUSP00000120364
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,974,154 - 60,046,489 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150954
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1159,970,614 - 59,971,510 (-)Ensembl
RefSeq Acc Id: NM_001290011   ⟹   NP_001276940
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,440 - 59,937,315 (-)NCBI
GRCm381159,970,614 - 60,046,489 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290012   ⟹   NP_001276941
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,440 - 59,937,315 (-)NCBI
GRCm381159,970,614 - 60,046,489 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290013   ⟹   NP_001276942
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,440 - 59,931,014 (-)NCBI
GRCm381159,970,614 - 60,040,188 (-)NCBI
Sequence:
RefSeq Acc Id: NM_001290014   ⟹   NP_001276943
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,440 - 59,931,014 (-)NCBI
GRCm381159,970,614 - 60,040,188 (-)NCBI
Sequence:
RefSeq Acc Id: NM_008819   ⟹   NP_032845
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,440 - 59,927,831 (-)NCBI
GRCm381159,970,614 - 60,037,005 (-)NCBI
MGSCv371159,784,119 - 59,850,341 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532478   ⟹   XP_006532541
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391159,861,446 - 59,937,394 (-)NCBI
GRCm381159,970,620 - 60,046,561 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_032845   ⟸   NM_008819
- Peptide Label: isoform b
- UniProtKB: Q61907 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006532541   ⟸   XM_006532478
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: NP_001276941   ⟸   NM_001290012
- Peptide Label: isoform b
- UniProtKB: Q61907 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276940   ⟸   NM_001290011
- Peptide Label: isoform a
- UniProtKB: Q61907 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276943   ⟸   NM_001290014
- Peptide Label: isoform c
- UniProtKB: Q61907 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001276942   ⟸   NM_001290013
- Peptide Label: isoform b
- UniProtKB: Q61907 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000116314   ⟸   ENSMUST00000147422
RefSeq Acc Id: ENSMUSP00000000310   ⟸   ENSMUST00000000310
RefSeq Acc Id: ENSMUSP00000120364   ⟸   ENSMUST00000148512
RefSeq Acc Id: ENSMUSP00000099754   ⟸   ENSMUST00000102693
RefSeq Acc Id: ENSMUSP00000099753   ⟸   ENSMUST00000102692

Promoters
RGD ID:6821524
Promoter ID:MM_KWN:7678
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000012857
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,784,731 - 59,785,231 (-)MPROMDB
RGD ID:6821521
Promoter ID:MM_KWN:7679
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Spleen
Transcripts:OTTMUST00000012856
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,796,751 - 59,797,907 (-)MPROMDB
RGD ID:6821525
Promoter ID:MM_KWN:7680
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000012863
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,834,356 - 59,834,856 (-)MPROMDB
RGD ID:6846878
Promoter ID:MM_ACW:7600
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day6
Transcripts:PEMT.LSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,845,796 - 59,846,296 (-)MPROMDB
RGD ID:6821523
Promoter ID:MM_KWN:7681
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000078045,   ENSMUST00000093053,   OTTMUST00000012859,   OTTMUST00000012864
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,850,206 - 59,850,706 (-)MPROMDB
RGD ID:6821522
Promoter ID:MM_KWN:7683
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000093052,   ENSMUST00000102693,   OTTMUST00000012860,   OTTMUST00000012865,   UC007JFJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361159,859,581 - 59,860,277 (-)MPROMDB
RGD ID:8674858
Promoter ID:EPDNEW_M15460
Type:initiation region
Name:Pemt_2
Description:Mus musculus phosphatidylethanolamine N-methyltransferase , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15461  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381160,036,934 - 60,036,994EPDNEW
RGD ID:8674860
Promoter ID:EPDNEW_M15461
Type:multiple initiation site
Name:Pemt_1
Description:Mus musculus phosphatidylethanolamine N-methyltransferase , transcriptvariant 3, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15460  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381160,046,485 - 60,046,545EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:104535 AgrOrtholog
Ensembl Genes ENSMUSG00000000301 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000000310 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000099753 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000099754 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000116314 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000120364 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000000310 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000102692 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000102693 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000147422 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000148512 UniProtKB/TrEMBL
InterPro PEMT/MFAP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Phopholipid_MeTrfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:18618 UniProtKB/Swiss-Prot
MGD MGI:104535 ENTREZGENE
NCBI Gene 18618 ENTREZGENE
PANTHER PTHR15458 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PEMT UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pemt PhenoGen
PIRSF PEMT UniProtKB/Swiss-Prot
PROSITE SAM_PEMT_PEM2 UniProtKB/Swiss-Prot
UniProt B1ARC9_MOUSE UniProtKB/TrEMBL
  B1ARD1_MOUSE UniProtKB/TrEMBL
  PEMT_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q3UZN8 UniProtKB/Swiss-Prot
  Q7TNW6 UniProtKB/Swiss-Prot
  Q8R0I1 UniProtKB/Swiss-Prot