Myog (myogenin) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Myog (myogenin) Mus musculus
Analyze
Symbol: Myog
Name: myogenin
RGD ID: 736713
MGI Page MGI
Description: Exhibits DNA-binding transcription activator activity, RNA polymerase II-specific; E-box binding activity; and chromatin DNA binding activity. Involved in several processes, including cellular response to estradiol stimulus; positive regulation of cell differentiation; and regulation of muscle adaptation. Localizes to nucleus. Is expressed in several structures, including alimentary system; embryo mesenchyme; genitourinary system; limb; and musculature. Orthologous to human MYOG (myogenin); INTERACTS WITH 1,2-dimethylhydrazine; 17beta-estradiol; 2,3',4,4',5-Pentachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: bHLHc; bHLHc3; my; MYF4; myo; MYOD1-related protein
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391134,217,742 - 134,220,286 (+)NCBIGRCm39mm39
GRCm39 Ensembl1134,217,727 - 134,220,286 (+)Ensembl
GRCm381134,290,004 - 134,292,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1134,289,989 - 134,292,548 (+)EnsemblGRCm38mm10GRCm38
MGSCv371136,186,581 - 136,189,125 (+)NCBIGRCm37mm9NCBIm37
MGSCv361136,106,424 - 136,108,961 (+)NCBImm8
Celera1136,900,556 - 136,903,100 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map158.18NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process
cell differentiation  (IEA)
cellular response to estradiol stimulus  (IDA)
cellular response to growth factor stimulus  (IDA)
cellular response to lithium ion  (IDA)
cellular response to magnetism  (ISO)
cellular response to retinoic acid  (ISO)
cellular response to tumor necrosis factor  (IDA)
histone H3 acetylation  (IDA)
histone H4 acetylation  (IDA)
multicellular organism development  (IEA)
muscle cell differentiation  (IDA)
muscle organ development  (IGI)
myoblast differentiation  (ISO)
myotube differentiation  (IGI,ISO)
negative regulation of cell population proliferation  (IDA)
negative regulation of glycolytic process  (ISO)
ossification  (IMP)
positive regulation of muscle atrophy  (IMP)
positive regulation of myoblast differentiation  (IBA,IDA)
positive regulation of myotube differentiation  (IDA)
positive regulation of oxidative phosphorylation  (ISO)
positive regulation of skeletal muscle fiber development  (IBA,IMP)
positive regulation of transcription by RNA polymerase II  (IBA,IC,IDA,IGI,IMP,ISO)
positive regulation of transcription, DNA-templated  (IDA)
regulation of cell cycle  (IDA)
regulation of myoblast fusion  (IMP)
regulation of skeletal muscle satellite cell proliferation  (IMP)
regulation of transcription by RNA polymerase II  (IBA)
regulation of transcription, DNA-templated  (IEA)
response to denervation involved in regulation of muscle adaptation  (IDA)
response to electrical stimulus involved in regulation of muscle adaptation  (ISO)
response to gravity  (ISO)
response to muscle activity  (ISO)
response to muscle activity involved in regulation of muscle adaptation  (ISO)
skeletal muscle atrophy  (ISO)
skeletal muscle cell differentiation  (IBA)
skeletal muscle fiber development  (IMP)
skeletal muscle tissue development  (IDA,TAS)
skeletal muscle tissue regeneration  (ISO)
striated muscle atrophy  (IMP)

Cellular Component
nucleoplasm  (ISO)
nucleus  (IDA,ISO,TAS)
protein-DNA complex  (ISO)

References

Additional References at PubMed
PMID:1311614   PMID:1321062   PMID:1324403   PMID:1324843   PMID:1361374   PMID:1374351   PMID:1429837   PMID:1525038   PMID:1618148   PMID:1652425   PMID:1668275   PMID:1794058  
PMID:1846704   PMID:1901785   PMID:1911647   PMID:1962752   PMID:2045411   PMID:2168405   PMID:2172083   PMID:2211821   PMID:2473006   PMID:2537150   PMID:2552320   PMID:7529678  
PMID:7532173   PMID:7588063   PMID:7588068   PMID:7589813   PMID:7600971   PMID:7651534   PMID:7720554   PMID:7720577   PMID:7720708   PMID:7729687   PMID:7787235   PMID:7789282  
PMID:7797078   PMID:7846037   PMID:7851652   PMID:7863329   PMID:7901737   PMID:7922315   PMID:7929574   PMID:7956819   PMID:8026334   PMID:8076526   PMID:8118099   PMID:8120103  
PMID:8136524   PMID:8162858   PMID:8187980   PMID:8284216   PMID:8293880   PMID:8294401   PMID:8383334   PMID:8384837   PMID:8391346   PMID:8391506   PMID:8391976   PMID:8392225  
PMID:8393145   PMID:8393146   PMID:8404540   PMID:8404542   PMID:8405673   PMID:8408200   PMID:8486351   PMID:8565825   PMID:8565855   PMID:8573720   PMID:8575308   PMID:8587605  
PMID:8627340   PMID:8631255   PMID:8631261   PMID:8681797   PMID:8760303   PMID:8797820   PMID:8811512   PMID:8812059   PMID:8853903   PMID:8854889   PMID:8950513   PMID:8955271  
PMID:8957005   PMID:9094721   PMID:9109488   PMID:9118475   PMID:9153393   PMID:9170103   PMID:9186058   PMID:9187078   PMID:9216993   PMID:9226440   PMID:9234731   PMID:9242490  
PMID:9264261   PMID:9268575   PMID:9268580   PMID:9284043   PMID:9284044   PMID:9342347   PMID:9359635   PMID:9428409   PMID:9438383   PMID:9600108   PMID:9609818   PMID:9611134  
PMID:9622634   PMID:9690472   PMID:9690473   PMID:9771705   PMID:9808779   PMID:9811581   PMID:9826681   PMID:9828134   PMID:9876177   PMID:9892671   PMID:9925645   PMID:10037786  
PMID:10075840   PMID:10208749   PMID:10226008   PMID:10364424   PMID:10439029   PMID:10449756   PMID:10556048   PMID:10559491   PMID:10572050   PMID:10590474   PMID:10603357   PMID:10603359  
PMID:10635459   PMID:10652346   PMID:10653966   PMID:10669094   PMID:10694423   PMID:10696067   PMID:10725239   PMID:10733231   PMID:10804169   PMID:10813634   PMID:10835421   PMID:10879540  
PMID:10898959   PMID:10906448   PMID:10929709   PMID:10973962   PMID:10974667   PMID:10985858   PMID:11076674   PMID:11134352   PMID:11169848   PMID:11201041   PMID:11313460   PMID:11357198  
PMID:11381084   PMID:11493522   PMID:11585928   PMID:11728447   PMID:11782431   PMID:11819203   PMID:11829488   PMID:11839816   PMID:12058061   PMID:12118102   PMID:12135755   PMID:12370779  
PMID:12372284   PMID:12376544   PMID:12414734   PMID:12421714   PMID:12421720   PMID:12477932   PMID:12486129   PMID:12493912   PMID:12620991   PMID:12668636   PMID:12697902   PMID:12798290  
PMID:12861012   PMID:12871697   PMID:12915233   PMID:12925591   PMID:14499644   PMID:14517256   PMID:14643678   PMID:14678836   PMID:14732408   PMID:14734627   PMID:14762206   PMID:14960280  
PMID:14960495   PMID:14966278   PMID:15075292   PMID:15149596   PMID:15155583   PMID:15282310   PMID:15302855   PMID:15322112   PMID:15366017   PMID:15366018   PMID:15384171   PMID:15385444  
PMID:15386014   PMID:15489334   PMID:15520282   PMID:15525990   PMID:15530859   PMID:15546868   PMID:15572127   PMID:15572686   PMID:15604102   PMID:15618518   PMID:15634692   PMID:15673614  
PMID:15706034   PMID:15739233   PMID:15788460   PMID:15870273   PMID:15893969   PMID:15937819   PMID:15964993   PMID:16000382   PMID:16140986   PMID:16141072   PMID:16198599   PMID:16203745  
PMID:16236524   PMID:16251273   PMID:16323077   PMID:16387292   PMID:16407395   PMID:16412699   PMID:16424906   PMID:16437161   PMID:16443371   PMID:16467359   PMID:16537918   PMID:16554364  
PMID:16595606   PMID:16598734   PMID:16638982   PMID:16730693   PMID:17075071   PMID:17098221   PMID:17107996   PMID:17166778   PMID:17192267   PMID:17194702   PMID:17194759   PMID:17223098  
PMID:17242400   PMID:17289022   PMID:17295338   PMID:17344222   PMID:17384148   PMID:17418107   PMID:17477400   PMID:17502421   PMID:17519233   PMID:17531403   PMID:17540357   PMID:17652354  
PMID:17873280   PMID:17875930   PMID:17904117   PMID:17932502   PMID:17954558   PMID:17974128   PMID:18047787   PMID:18062958   PMID:18270299   PMID:18287559   PMID:18331721   PMID:18367555  
PMID:18445292   PMID:18557763   PMID:18593883   PMID:18676376   PMID:18719582   PMID:18721801   PMID:18851836   PMID:19008232   PMID:19095803   PMID:19109424   PMID:19319192   PMID:19443691  
PMID:19521566   PMID:19531352   PMID:19631210   PMID:19633357   PMID:19641492   PMID:19666532   PMID:19698141   PMID:19712265   PMID:19723804   PMID:19783738   PMID:19783823   PMID:19812254  
PMID:19818710   PMID:19877283   PMID:19962975   PMID:20013826   PMID:20059953   PMID:20059958   PMID:20171203   PMID:20178747   PMID:20193675   PMID:20236942   PMID:20307260   PMID:20334626  
PMID:20368965   PMID:20399744   PMID:20412779   PMID:20417199   PMID:20498275   PMID:20668528   PMID:20887891   PMID:20935518   PMID:20940258   PMID:20978076   PMID:21035439   PMID:21042574  
PMID:21084569   PMID:21177767   PMID:21179410   PMID:21254332   PMID:21264243   PMID:21272575   PMID:21283718   PMID:21288905   PMID:21420400   PMID:21422169   PMID:21465538   PMID:21478499  
PMID:21498568   PMID:21543328   PMID:21683695   PMID:21701496   PMID:21730146   PMID:21782525   PMID:21873635   PMID:21884692   PMID:21985497   PMID:21989910   PMID:21998026   PMID:22076929  
PMID:22106411   PMID:22174917   PMID:22235349   PMID:22315423   PMID:22328527   PMID:22351927   PMID:22377357   PMID:22438570   PMID:22460713   PMID:22513369   PMID:22522309   PMID:22638570  
PMID:22710718   PMID:22736793   PMID:22847234   PMID:22859371   PMID:22940113   PMID:23092676   PMID:23211595   PMID:23236180   PMID:23307821   PMID:23349075   PMID:23364797   PMID:23406902  
PMID:23451037   PMID:23615282   PMID:23623977   PMID:23650549   PMID:23660517   PMID:23732671   PMID:23765941   PMID:23868259   PMID:23907538   PMID:23926128   PMID:23946446   PMID:23968884  
PMID:23987512   PMID:23993744   PMID:24009529   PMID:24019467   PMID:24043309   PMID:24055173   PMID:24055422   PMID:24146773   PMID:24167636   PMID:24188104   PMID:24275324   PMID:24301466  
PMID:24349514   PMID:24357723   PMID:24361185   PMID:24385428   PMID:24394376   PMID:24440912   PMID:24449764   PMID:24532688   PMID:24656932   PMID:24703692   PMID:24727028   PMID:24742196  
PMID:24844572   PMID:24871946   PMID:24912677   PMID:24927569   PMID:24934157   PMID:25005473   PMID:25085416   PMID:25248974   PMID:25329411   PMID:25330622   PMID:25530839   PMID:25715398  
PMID:25774500   PMID:25848030   PMID:26028225   PMID:26074812   PMID:26114479   PMID:26237517   PMID:26275053   PMID:26387456   PMID:26395480   PMID:26430214   PMID:26462877   PMID:26483211  
PMID:26563778   PMID:26586200   PMID:26586428   PMID:26688546   PMID:26708556   PMID:26801181   PMID:26811377   PMID:26839363   PMID:27120339   PMID:27166947   PMID:27184118   PMID:27187787  
PMID:27223325   PMID:27434733   PMID:27578244   PMID:27680312   PMID:27743478   PMID:27780863   PMID:27798115   PMID:27899448   PMID:27906130   PMID:28130125   PMID:28166224   PMID:28228264  
PMID:28334989   PMID:28438836   PMID:28569755   PMID:28600496   PMID:28607928   PMID:28706950   PMID:28821740   PMID:28827394   PMID:28893950   PMID:28973166   PMID:28981706   PMID:29084951  
PMID:29273440   PMID:29316425   PMID:29449644   PMID:29543863   PMID:29555813   PMID:29768039   PMID:30121012   PMID:30237319   PMID:30254164   PMID:30389854   PMID:30548789   PMID:30622218  
PMID:30683671   PMID:30872276   PMID:30996264   PMID:31433978   PMID:31535973   PMID:31685980   PMID:31754141   PMID:31874220   PMID:31875546   PMID:32094117   PMID:32160556   PMID:32314958  
PMID:32479258   PMID:32591430   PMID:32768399   PMID:33201874   PMID:33298461   PMID:33527775  


Genomics

Comparative Map Data
Myog
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391134,217,742 - 134,220,286 (+)NCBIGRCm39mm39
GRCm39 Ensembl1134,217,727 - 134,220,286 (+)Ensembl
GRCm381134,290,004 - 134,292,548 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1134,289,989 - 134,292,548 (+)EnsemblGRCm38mm10GRCm38
MGSCv371136,186,581 - 136,189,125 (+)NCBIGRCm37mm9NCBIm37
MGSCv361136,106,424 - 136,108,961 (+)NCBImm8
Celera1136,900,556 - 136,903,100 (+)NCBICelera
Cytogenetic Map1E4NCBI
cM Map158.18NCBI
MYOG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1203,083,129 - 203,086,012 (-)EnsemblGRCh38hg38GRCh38
GRCh381203,083,129 - 203,086,012 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371203,052,257 - 203,055,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361201,318,880 - 201,322,000 (-)NCBINCBI36hg18NCBI36
Build 341199,783,916 - 199,786,823NCBI
Celera1176,181,515 - 176,184,632 (-)NCBI
Cytogenetic Map1q32.1NCBI
HuRef1174,217,862 - 174,220,769 (-)NCBIHuRef
CHM1_11204,474,600 - 204,477,509 (-)NCBICHM1_1
Myog
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21345,745,455 - 45,748,044 (+)NCBI
Rnor_6.0 Ensembl1351,126,459 - 51,129,048 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.01351,126,459 - 51,129,048 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.01356,182,747 - 56,185,336 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41347,243,712 - 47,246,301 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11347,257,754 - 47,260,344 (+)NCBI
Celera1346,073,572 - 46,076,161 (+)NCBICelera
Cytogenetic Map13q13NCBI
Myog
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495540639,099,716 - 39,102,501 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495540639,099,044 - 39,102,479 (-)NCBIChiLan1.0ChiLan1.0
MYOG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11182,979,700 - 182,982,607 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1182,979,700 - 182,982,611 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01178,684,933 - 178,687,971 (-)NCBIMhudiblu_PPA_v0panPan3
MYOG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.17112,116 - 114,604 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl7112,034 - 113,892 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha7167,989 - 170,338 (+)NCBI
ROS_Cfam_1.07122,772 - 125,124 (+)NCBI
UMICH_Zoey_3.17111,008 - 113,379 (+)NCBI
UNSW_CanFamBas_1.07220,521 - 222,887 (+)NCBI
UU_Cfam_GSD_1.07243,050 - 245,421 (+)NCBI
Myog
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934472,272,365 - 72,275,138 (+)NCBI
SpeTri2.0NW_0049365671,507,042 - 1,509,814 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MYOG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl9113,782,469 - 113,785,362 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.19113,783,233 - 113,785,312 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.29125,243,803 - 125,245,882 (-)NCBISscrofa10.2Sscrofa10.2susScr3
Pig Cytomap9q2.1-q2.6NCBI
MYOG
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12526,264,872 - 26,269,652 (+)NCBI
ChlSab1.1 Ensembl2526,266,717 - 26,268,867 (+)Ensembl
Myog
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248077,742,926 - 7,753,149 (+)NCBI

Position Markers
D1Mit140  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,289,365 - 134,289,505UniSTSGRCm38
MGSCv371136,185,942 - 136,186,082UniSTSGRCm37
Celera1136,899,912 - 136,900,057UniSTS
Cytogenetic Map1E4UniSTS
cM Map170.0UniSTS
Whitehead Genetic173.2UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371136,186,634 - 136,186,818UniSTSGRCm37
MGSCv371136,186,896 - 136,188,319UniSTSGRCm37
MGSCv371136,187,049 - 136,187,700UniSTSGRCm37
MGSCv371136,187,672 - 136,188,269UniSTSGRCm37
MGSCv371576,853,921 - 76,854,127UniSTSGRCm37
MGSCv371136,186,795 - 136,187,067UniSTSGRCm37
MGSCv371136,188,975 - 136,189,093UniSTSGRCm37
MGSCv371136,187,059 - 136,188,503UniSTSGRCm37
Celera1578,511,599 - 78,511,805UniSTS
Celera1136,900,770 - 136,901,042UniSTS
Celera1136,900,871 - 136,902,294UniSTS
Celera1136,901,034 - 136,902,478UniSTS
Celera1136,901,647 - 136,902,244UniSTS
Celera1136,901,024 - 136,901,675UniSTS
Celera1136,900,609 - 136,900,793UniSTS
Celera1136,902,950 - 136,903,068UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
cM Map172.3UniSTS
cM Map172.3UniSTS
cM Map172.3UniSTS
cM Map172.3UniSTS
cM Map1543.3UniSTS
cM Map172.3UniSTS
UniSTS:234220  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,092 - 134,290,418UniSTSGRCm38
MGSCv371136,186,669 - 136,186,995UniSTSGRCm37
Celera1136,900,644 - 136,900,970UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
PMC133893P1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,197 - 134,291,126UniSTSGRCm38
MGSCv371136,186,774 - 136,187,703UniSTSGRCm37
Celera1136,900,749 - 136,901,678UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
PMC133998P4  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,291,099 - 134,292,015UniSTSGRCm38
MGSCv371136,187,676 - 136,188,592UniSTSGRCm37
Celera1136,901,651 - 136,902,567UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
PMC151607P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,292,011 - 134,292,328UniSTSGRCm38
MGSCv371136,188,588 - 136,188,905UniSTSGRCm37
Celera1136,902,563 - 136,902,880UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
PMC207566P7  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,289,851 - 134,290,060UniSTSGRCm38
MGSCv371136,186,428 - 136,186,637UniSTSGRCm37
Celera1136,900,403 - 136,900,612UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
D0Nds1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381577,023,053 - 77,023,216UniSTSGRCm38
MGSCv371576,853,483 - 76,853,646UniSTSGRCm37
Celera1578,511,161 - 78,511,324UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map15D3UniSTS
cM MapUN UniSTS
cM Map15 UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,472 - 134,291,123UniSTSGRCm38
MGSCv371136,187,049 - 136,187,700UniSTSGRCm37
Celera1136,901,024 - 136,901,675UniSTS
Cytogenetic Map1E4UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,482 - 134,291,926UniSTSGRCm38
MGSCv371136,187,059 - 136,188,503UniSTSGRCm37
Celera1136,901,034 - 136,902,478UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381577,023,491 - 77,023,697UniSTSGRCm38
MGSCv371576,853,921 - 76,854,127UniSTSGRCm37
Celera1578,511,599 - 78,511,805UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map15D3UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,319 - 134,291,742UniSTSGRCm38
MGSCv371136,186,896 - 136,188,319UniSTSGRCm37
Celera1136,900,871 - 136,902,294UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,057 - 134,290,241UniSTSGRCm38
MGSCv371136,186,634 - 136,186,818UniSTSGRCm37
Celera1136,900,609 - 136,900,793UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,292,398 - 134,292,516UniSTSGRCm38
MGSCv371136,188,975 - 136,189,093UniSTSGRCm37
Celera1136,902,950 - 136,903,068UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map1E4UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,290,218 - 134,290,490UniSTSGRCm38
MGSCv371136,186,795 - 136,187,067UniSTSGRCm37
Celera1136,900,770 - 136,901,042UniSTS
Cytogenetic Map1E4UniSTS
cM Map172.3UniSTS
Myog  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381134,291,095 - 134,291,692UniSTSGRCm38
MGSCv371136,187,672 - 136,188,269UniSTSGRCm37
Celera1136,901,647 - 136,902,244UniSTS
Cytogenetic Map1E4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13824984Twq5_mtestis weight QTL 5 (mouse)13000000185000000Mouse
1357753Kidq2_mkidney weight QTL 2 (mouse)Not determined134721057150318120Mouse
1357488Splq3_mspleen weight QTL 3 (mouse)Not determined134721057150318120Mouse
1558860W10q7_mweight 10 weeks QTL 7 (mouse)Not determined134721057150318120Mouse
1301722Cia9_mcollagen induced arthritis QTL 9 (mouse)Not determined145744740189571420Mouse
4142291Aec2_mautoimmune exocrinopathy 2 (mouse)Not determined52418578182423027Mouse
10412185Hcs9_mhepatocarcinogenesis susceptibility 9 (mouse)Not determined163815531189571420Mouse
1300841Ssial1_msusceptibility to sialadenitis 1 (mouse)Not determined163880843153681816Mouse
1300989Lrdg1_mlight induced retinal degeneration 1 (mouse)Not determined173716016147249632Mouse
4141914Gcsfis_mG-CSF induced splenomegaly (mouse)Not determined74477076148839837Mouse
27095928Pglq6_mpelvic girdle length QTL 6, 10 week (mouse)176000000148900000Mouse
26884448Sklq1_mskull length QTL 1, 5 week (mouse)176000000181500000Mouse
1301350Nidd4k_mNidd4 on KK-A (mouse)Not determined782314261147249632Mouse
1357439Popoa_mpremature ovulation and primary oocyte arrest (mouse)Not determined182665468135687641Mouse
27095913Scvln2_msacral vertebrae length 2, 5 week (mouse)194200000148900000Mouse
27095901Scvln8_msacral vertebrae length 2, 10 week (mouse)194200000172200000Mouse
27226779Tibl1_mtibia length 1, 5 week (mouse)195600000162200000Mouse
1301193Lxw3_mlupus BXSB x NZW 3 (mouse)Not determined1103040804137040937Mouse
10412162Nobq3_mNew Zealand obese QTL 3 (mouse)Not determined1104005680191493284Mouse
12790994Aaaq1_maortic arch angle QTL 1 (mouse)1109568206143568206Mouse
1301979Melm1_mmelanoma modifier 1 (mouse)Not determined1109710525143710742Mouse
1357600Obq17_mobesity QTL 17 (mouse)Not determined1110625442144625561Mouse
10401248Bglu12_mblood glucose level 12 (mouse)Not determined1110625442144625561Mouse
1301149Lrnx12_mlearning-contextual 12 (mouse)Not determined1112081092168358833Mouse
1302098Eila1_methanol induced locomotor activity 1 (mouse)Not determined1112081092175641372Mouse
1301249Sbw1_msplenomegaly-NZB x NZW 1 (mouse)Not determined1112203268146203348Mouse
10045640Jckm4_mjuvenile cystic kidney modifier 4 (mouse)Not determined1116363098150363199Mouse
27095915Scvln13_msacral vertebrae length 2, 16 week (mouse)1117600000180000000Mouse
1302161Exq2_mexploratory and excitability QTL 2 (mouse)Not determined1118171982152172078Mouse
27226714Metcl1_mmetatarsal-calcaneal length 1, 5 week (mouse)1121800000139800000Mouse
27226740Metcl13_mmetatarsal-calcaneal length 13, 16 week (mouse)1121800000153900000Mouse
27226743Metcl7_mmetatarsal-calcaneal length 7, 10 week (mouse)1121800000154000000Mouse
27226767Tibl10_mtibia length 10, 10 week (mouse)1121800000165000000Mouse
27226799Feml5_mfemur length 5, 5 week (mouse)1122100000165000000Mouse
12880408V125Dq3_mvitamin D active form serum level QTL 3 (mouse)1123000000157000000Mouse
1301488Tir3b_mtrypansomiasis infection response 3b (mouse)Not determined1128551097157361794Mouse
27095935Ulnl5_mulna length 5, 10 week (mouse)1128800000181500000Mouse
1301608Emo3_memotionality 3 (mouse)Not determined1129255120163255255Mouse
1302128Ity3_mimmunity to S. typhimurium 3 (mouse)Not determined11131228571165311895Mouse
14746980Manh50_mmandible shape 50 (mouse)1134255813168255813Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:239
Count of miRNA genes:206
Interacting mature miRNAs:218
Transcripts:ENSMUST00000027730
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_031189 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB221643 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB921553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB921554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB921555 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB921556 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB921557 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC124110 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048683 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC068019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ096370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  D90156 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC388421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  LC388422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M95800 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X15784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X71910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000027730   ⟹   ENSMUSP00000027730
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1134,289,989 - 134,292,548 (+)Ensembl
RefSeq Acc Id: NM_031189   ⟹   NP_112466
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391134,217,742 - 134,220,286 (+)NCBI
GRCm381134,290,004 - 134,292,548 (+)ENTREZGENE
MGSCv371136,186,581 - 136,189,125 (+)RGD
Celera1136,900,556 - 136,903,100 (+)RGD
cM Map1 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_112466   ⟸   NM_031189
- UniProtKB: P12979 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000027730   ⟸   ENSMUST00000027730
Protein Domains
bHLH

Promoters
RGD ID:6874998
Promoter ID:EPDNEW_M950
Type:multiple initiation site
Name:Myog_1
Description:Mus musculus myogenin , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381134,290,007 - 134,290,067EPDNEW
RGD ID:6818140
Promoter ID:MM_KWN:2144
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:ES_Cell
Transcripts:ENSMUST00000027730
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361136,186,786 - 136,187,286 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:97276 AgrOrtholog
Ensembl Genes ENSMUSG00000026459 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000027730 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000027730 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 4.10.280.10 UniProtKB/Swiss-Prot
InterPro Basic UniProtKB/Swiss-Prot
  bHLH_dom UniProtKB/Swiss-Prot
  HLH_DNA-bd_sf UniProtKB/Swiss-Prot
  Myogenic_factor UniProtKB/Swiss-Prot
KEGG Report mmu:17928 UniProtKB/Swiss-Prot
MGD MGI:97276 ENTREZGENE
NCBI Gene 17928 ENTREZGENE
PANTHER PTHR11534 UniProtKB/Swiss-Prot
Pfam Basic UniProtKB/Swiss-Prot
  HLH UniProtKB/Swiss-Prot
PhenoGen Myog PhenoGen
PROSITE BHLH UniProtKB/Swiss-Prot
SMART BASIC UniProtKB/Swiss-Prot
  HLH UniProtKB/Swiss-Prot
Superfamily-SCOP SSF47459 UniProtKB/Swiss-Prot
UniProt MYOG_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE