Scn10a (sodium channel, voltage-gated, type X, alpha) - Rat Genome Database
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Gene: Scn10a (sodium channel, voltage-gated, type X, alpha) Mus musculus
Analyze
Symbol: Scn10a
Name: sodium channel, voltage-gated, type X, alpha
RGD ID: 736179
MGI Page MGI
Description: Exhibits voltage-gated sodium channel activity. Involved in cardiac conduction; regulation of atrial cardiac muscle cell membrane depolarization; and sodium ion transport. Localizes to C-fiber and plasma membrane. Is expressed in brain; ganglia; and heart. Human ortholog(s) of this gene implicated in familial episodic pain syndrome 2. Orthologous to human SCN10A (sodium voltage-gated channel alpha subunit 10); PARTICIPATES IN alfentanil pharmacodynamics pathway; bupivacaine pharmacodynamics pathway; buprenorphine pharmacodynamics pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 2,4,6-trinitrobenzenesulfonic acid; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: Nav; Nav1.8; peripheral nerve sodium channel 3; PN3; sensory neuron sodium channel; SNS; sodium channel protein type 10 subunit alpha; sodium channel protein type X subunit alpha; voltage gated sodium channel; voltage-gated sodium channel Nav1.8 variant a; voltage-gated sodium channel Nav1.8 variant b; voltage-gated sodium channel subunit alpha Nav1.8
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399119,437,522 - 119,548,388 (-)NCBIGRCm39mm39
GRCm389119,608,456 - 119,719,322 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9119,608,456 - 119,719,322 (-)EnsemblGRCm38mm10GRCm38
MGSCv379119,517,584 - 119,603,478 (-)NCBIGRCm37mm9NCBIm37
MGSCv369119,457,165 - 119,543,058 (-)NCBImm8
Celera9120,082,167 - 120,168,344 (-)NCBICelera
Cytogenetic Map9F3NCBI
cM Map971.33NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Molecular Pathway Annotations     Click to see Annotation Detail View
alfentanil pharmacodynamics pathway  (ISO)
bupivacaine pharmacodynamics pathway  (ISO)
buprenorphine pharmacodynamics pathway  (ISO)
chloroprocaine pharmacodynamics pathway  (ISO)
citalopram pharmacodynamics pathway  (ISO)
cocaine pharmacodynamics pathway  (ISO)
codeine and morphine pharmacodynamics pathway  (ISO)
desipramine pharmacodynamics pathway  (ISO)
diphenoxylate pharmacodynamics pathway  (ISO)
escitalopram pharmacodynamics pathway  (ISO)
ethylmorphine pharmacodynamics pathway  (ISO)
fentanyl pharmacodynamics pathway  (ISO)
fluoxetine pharmacodynamics pathway  (ISO)
heroin pharmacodynamics pathway  (ISO)
hydrocodone pharmacodynamics pathway  (ISO)
hydromorphone pharmacodynamics pathway  (ISO)
imipramine pharmacodynamics pathway  (ISO)
levacetylmethadol pharmacodynamics pathway  (ISO)
levobupivacaine phgarmacodynamics pathway  (ISO)
levorphanol pharmacodynamics pathway  (ISO)
lidocaine pharmacodynamics pathway  (ISO)
lidocaine pharmacokinetics pathway  (ISO)
mepivacaine pharmacodynamics pathway  (ISO)
methadone pharmacodynamics pathway  (ISO)
nalbuphine pharmacodynamics pathway  (ISO)
naloxone pharmacodynamics pathway  (ISO)
naltrexone pharmacodynamics pathway  (ISO)
nicotine pharmacodynamics pathway  (ISO)
oxybuprocaine pharmacodynamics pathway  (ISO)
oxycodone pharmacodynamics pathway  (ISO)
oxymorphone pharmacodynamics pathway  (ISO)
pentazocine pharmacodynamics pathway  (ISO)
prilocaine pharmacodynamics pathway  (ISO)
procaine pharmacodynamics pathway  (ISO)
remifentanil pharmacodynamics pathway  (ISO)
ropivacaine pharmacodynamics pathway  (ISO)
tramadol pharmacodynamics pathway  (ISO)

References

Additional References at PubMed
PMID:9143495   PMID:9148921   PMID:10349636   PMID:10398684   PMID:10448219   PMID:10938298   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11495938   PMID:11568640   PMID:12351708  
PMID:12824446   PMID:14533785   PMID:15047701   PMID:15123669   PMID:15205116   PMID:15314237   PMID:15621361   PMID:15979214   PMID:16029194   PMID:16111501   PMID:16141072   PMID:16141073  
PMID:16413788   PMID:16446141   PMID:16478543   PMID:16602821   PMID:16850455   PMID:16857712   PMID:16985003   PMID:17035534   PMID:17052333   PMID:17350991   PMID:17540018   PMID:17568746  
PMID:18399542   PMID:18466327   PMID:18498732   PMID:18498735   PMID:18669863   PMID:18845912   PMID:19239624   PMID:19535578   PMID:19931571   PMID:19953341   PMID:20062061   PMID:20147541  
PMID:20174994   PMID:20609517   PMID:20702715   PMID:20861385   PMID:21040852   PMID:21059214   PMID:21145890   PMID:21267068   PMID:21295407   PMID:21415372   PMID:21618224   PMID:21873635  
PMID:21903816   PMID:22087007   PMID:22260870   PMID:22367990   PMID:22426212   PMID:22449024   PMID:22531176   PMID:22703890   PMID:22706305   PMID:22723299   PMID:22723301   PMID:22850668  
PMID:22870919   PMID:22875917   PMID:23433317   PMID:23575686   PMID:23652591   PMID:23773488   PMID:23986244   PMID:24069332   PMID:24216512   PMID:24259584   PMID:24305821   PMID:24440715  
PMID:24447515   PMID:24642470   PMID:24759321   PMID:24763188   PMID:24903831   PMID:24952961   PMID:24957987   PMID:25101983   PMID:25116249   PMID:25161883   PMID:25369838   PMID:25426020  
PMID:25453842   PMID:25747279   PMID:25903105   PMID:25959819   PMID:26076474   PMID:26514267   PMID:26915043   PMID:26923409   PMID:26971948   PMID:27022626   PMID:27068287   PMID:27161260  
PMID:27215377   PMID:27566399   PMID:27604420   PMID:27708397   PMID:27806966   PMID:27822503   PMID:27916453   PMID:27984182   PMID:28074005   PMID:28280205   PMID:28450535   PMID:28558976  
PMID:28658621   PMID:28871176   PMID:29497094   PMID:29669290   PMID:29970412   PMID:29988128   PMID:30304667   PMID:30459229   PMID:30617209   PMID:30755524   PMID:30826183   PMID:30843875  
PMID:30886406   PMID:30907928   PMID:30917309   PMID:30930747   PMID:31197234   PMID:31253755   PMID:31324538   PMID:31618460   PMID:31666509   PMID:31730854   PMID:32019828   PMID:32170060  
PMID:32325033   PMID:32418916   PMID:32641826   PMID:32687056  


Genomics

Comparative Map Data
Scn10a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399119,437,522 - 119,548,388 (-)NCBIGRCm39mm39
GRCm389119,608,456 - 119,719,322 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9119,608,456 - 119,719,322 (-)EnsemblGRCm38mm10GRCm38
MGSCv379119,517,584 - 119,603,478 (-)NCBIGRCm37mm9NCBIm37
MGSCv369119,457,165 - 119,543,058 (-)NCBImm8
Celera9120,082,167 - 120,168,344 (-)NCBICelera
Cytogenetic Map9F3NCBI
cM Map971.33NCBI
SCN10A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl338,696,802 - 38,816,286 (-)EnsemblGRCh38hg38GRCh38
GRCh38338,696,807 - 38,816,217 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37338,738,837 - 38,835,501 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36338,713,841 - 38,810,505 (-)NCBINCBI36hg18NCBI36
Build 34338,713,840 - 38,810,505NCBI
Celera338,677,898 - 38,774,543 (-)NCBI
Cytogenetic Map3p22.2NCBI
HuRef338,781,159 - 38,877,645 (-)NCBIHuRef
CHM1_1338,690,433 - 38,787,099 (-)NCBICHM1_1
Scn10a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.08128,298,593 - 128,416,896 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8128,298,594 - 128,416,650 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08127,503,061 - 127,620,197 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48124,578,222 - 124,690,458 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.18124,597,959 - 124,710,195 (-)NCBI
Celera8118,500,856 - 118,611,564 (-)NCBICelera
Cytogenetic Map8q32NCBI
Scn10a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542725,157,179 - 25,243,473 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495542725,157,179 - 25,244,020 (+)NCBIChiLan1.0ChiLan1.0
SCN10A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1338,876,068 - 38,972,247 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl338,876,068 - 38,972,247 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0338,593,765 - 38,691,172 (-)NCBIMhudiblu_PPA_v0panPan3
SCN10A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl238,420,472 - 8,527,383 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1238,420,468 - 8,527,414 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Scn10a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_00493647328,010,123 - 28,102,124 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SCN10A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1323,481,999 - 23,570,452 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11323,481,537 - 23,570,454 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21325,726,454 - 25,805,806 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SCN10A
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.115624,962 - 724,018 (+)NCBI
ChlSab1.1 Ensembl15625,742 - 721,963 (+)Ensembl
Scn10a
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247312,254,445 - 2,356,174 (+)NCBI

Position Markers
UniSTS:236281  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389119,645,618 - 119,645,817UniSTSGRCm38
MGSCv379119,554,736 - 119,554,935UniSTSGRCm37
Celera9120,119,467 - 120,119,666UniSTS
Cytogenetic Map9F4UniSTS
cM Map967.0UniSTS
Y09108  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm389119,608,631 - 119,608,741UniSTSGRCm38
MGSCv379119,517,749 - 119,517,859UniSTSGRCm37
Celera9120,082,332 - 120,082,442UniSTS
Cytogenetic Map9F4UniSTS
cM Map967.0UniSTS
Whitehead/MRC_RH91177.51UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63332429120362868Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63332429120362868Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963332429120362868Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986230401120230530Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986239845120289624Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986748483120748483Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987800000121800000Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989284925123284925Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989412277123412396Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989563342123563342Mouse
12910770Splic1_mspleen iron content 1 (mouse)991413879124595110Mouse
12910772Lvic6_mliver iron content 6 (mouse)991413879124595110Mouse
12910773Splic3_mspleen iron content 3 (mouse)991413879124595110Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991641084124595110Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991641084124595110Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991641084124595110Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991641084124595110Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991641084124595110Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991641084124595110Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991683173124595110Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991683173124595110Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991683173124595110Mouse
1302001Bdln5_mbody length 5 (mouse)Not determined993762590124595110Mouse
1301484Bwq6_mbody weight (mouse)Not determined993762590124595110Mouse
14746992Manh67_mmandible shape 67 (mouse)994036768124595110Mouse
11537364Cnes5_mC. neoformans susceptibility locus 5 (mouse)996917590124595110Mouse
1301297Lcho1_mliver cholesterol 1 (mouse)Not determined9101060861124595110Mouse
1357627Tgq2_mtriglyceride QTL 2 (mouse)Not determined9102000187124595110Mouse
1357648Obq18_mobesity QTL 18 (mouse)Not determined9102000187124595110Mouse
1301789Pbwg4_mpostnatal body weight growth 4 (mouse)Not determined9103289445124595110Mouse
10412290Pvacm1l_mplasma vascular cell adhesion molecule 1 levels (mouse)Not determined9103289445124595110Mouse
12879896Berr3_mberghei resistance locus 3 (mouse)9103289445124595110Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:178
Count of miRNA genes:154
Interacting mature miRNAs:166
Transcripts:ENSMUST00000084787
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001205321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017313223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036154738 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC171201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ622906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ623269 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ623270 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK135787 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK157866 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY538273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ497421 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ497422 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ497423 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ497424 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ497425 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ516971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM373697 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KM373698 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L42342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Y09108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000084787   ⟹   ENSMUSP00000081845
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9119,608,456 - 119,719,032 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213392   ⟹   ENSMUSP00000148987
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9119,608,467 - 119,719,322 (-)Ensembl
RefSeq Acc Id: ENSMUST00000213401
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9119,694,323 - 119,718,963 (-)Ensembl
RefSeq Acc Id: ENSMUST00000214408   ⟹   ENSMUSP00000150830
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9119,608,925 - 119,694,325 (-)Ensembl
RefSeq Acc Id: ENSMUST00000216583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl9119,647,125 - 119,688,039 (-)Ensembl
RefSeq Acc Id: NM_001205321   ⟹   NP_001192250
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,437,522 - 119,548,098 (-)NCBI
GRCm389119,608,456 - 119,719,032 (-)NCBI
Celera9120,082,157 - 120,189,198 (-)ENTREZGENE
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009134   ⟹   NP_033160
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,437,522 - 119,548,098 (-)NCBI
GRCm389119,608,456 - 119,719,032 (-)NCBI
MGSCv379119,517,584 - 119,603,478 (-)RGD
Celera9120,082,157 - 120,189,198 (-)ENTREZGENE
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_017313221   ⟹   XP_017168710
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,445,853 - 119,548,388 (-)NCBI
GRCm389119,616,787 - 119,719,322 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313222   ⟹   XP_017168711
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,458,447 - 119,548,388 (-)NCBI
GRCm389119,629,491 - 119,719,322 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017313223   ⟹   XP_017168712
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,437,532 - 119,548,388 (-)NCBI
GRCm389119,608,466 - 119,719,322 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036154738   ⟹   XP_036010631
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm399119,457,608 - 119,548,388 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_033160   ⟸   NM_009134
- Peptide Label: isoform 2
- UniProtKB: Q6QIY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001192250   ⟸   NM_001205321
- Peptide Label: isoform 1
- UniProtKB: K3W4P8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017168712   ⟸   XM_017313223
- Peptide Label: isoform X4
- UniProtKB: Q6QIY3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_017168710   ⟸   XM_017313221
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_017168711   ⟸   XM_017313222
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: ENSMUSP00000081845   ⟸   ENSMUST00000084787
RefSeq Acc Id: ENSMUSP00000148987   ⟸   ENSMUST00000213392
RefSeq Acc Id: ENSMUSP00000150830   ⟸   ENSMUST00000214408
RefSeq Acc Id: XP_036010631   ⟸   XM_036154738
- Peptide Label: isoform X3
Protein Domains
Ion_trans   IQ   Na_trans_assoc


Additional Information

Database Acc Id Source(s)
AGR Gene MGI:108029 AgrOrtholog
Ensembl Genes ENSMUSG00000034533 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000081845 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000148987 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000150830 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000084787 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000213392 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000214408 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Ion_trans_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na_channel_a10su UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na_channel_asu UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na_trans_assoc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  VGCC_Ca_Na UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Volt_channel_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:20264 UniProtKB/Swiss-Prot
MGD MGI:108029 ENTREZGENE
NCBI Gene 20264 ENTREZGENE
PANTHER PTHR10037 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10037:SF208 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Ion_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Na_trans_assoc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Scn10a PhenoGen
PRINTS NACHANNEL UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R5RP33_MOUSE UniProtKB/TrEMBL
  A0A0R5RP34_MOUSE UniProtKB/TrEMBL
  K3W4P8 ENTREZGENE, UniProtKB/TrEMBL
  P70276_MOUSE UniProtKB/TrEMBL
  Q6QIY3 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q62243 UniProtKB/Swiss-Prot
  Q6EWG7 UniProtKB/Swiss-Prot
  Q6KCH7 UniProtKB/Swiss-Prot
  Q703F9 UniProtKB/Swiss-Prot