Dgkb (diacylglycerol kinase, beta) - Rat Genome Database

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Gene: Dgkb (diacylglycerol kinase, beta) Mus musculus
Analyze
Symbol: Dgkb
Name: diacylglycerol kinase, beta
RGD ID: 736089
MGI Page MGI
Description: Enables ATP-dependent diacylglycerol kinase activity. Involved in modulation of chemical synaptic transmission and regulation of postsynapse organization. Acts upstream of or within response to bacterium. Located in plasma membrane. Is active in Schaffer collateral - CA1 synapse and glutamatergic synapse. Is expressed in anterior abdominal wall musculature; nervous system; retina; and urinary system. Orthologous to human DGKB (diacylglycerol kinase beta).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 6430574F24; 90kda; C630029D13Rik; DAG kinase beta; DAGK2; DGK; DGK-bet; DGK-beta; diacylglycerol kinase beta; diglyceride kinase beta; mKIAA0718
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391237,930,169 - 38,684,238 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1237,867,725 - 38,684,238 (+)EnsemblGRCm39 Ensembl
GRCm381237,880,169 - 38,634,239 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1237,817,726 - 38,634,239 (+)EnsemblGRCm38mm10GRCm38
MGSCv371238,607,292 - 39,359,997 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361238,390,971 - 39,143,797 (+)NCBIMGSCv36mm8
Celera1239,316,859 - 40,057,925 (+)NCBICelera
Cytogenetic Map12A3NCBI
cM Map1217.11NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12832407   PMID:14610273   PMID:14645530   PMID:14681479   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16179923   PMID:16602821   PMID:17021016   PMID:20657643   PMID:21267068   PMID:21319224   PMID:21873635   PMID:22590645   PMID:23012479   PMID:23503970  
PMID:23681253   PMID:23814057   PMID:25446448   PMID:27495014   PMID:32581705   PMID:35650438   PMID:38187761  


Genomics

Comparative Map Data
Dgkb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391237,930,169 - 38,684,238 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1237,867,725 - 38,684,238 (+)EnsemblGRCm39 Ensembl
GRCm381237,880,169 - 38,634,239 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1237,817,726 - 38,634,239 (+)EnsemblGRCm38mm10GRCm38
MGSCv371238,607,292 - 39,359,997 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361238,390,971 - 39,143,797 (+)NCBIMGSCv36mm8
Celera1239,316,859 - 40,057,925 (+)NCBICelera
Cytogenetic Map12A3NCBI
cM Map1217.11NCBI
DGKB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38714,145,049 - 14,974,858 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl714,145,049 - 14,974,777 (-)EnsemblGRCh38hg38GRCh38
GRCh37714,184,674 - 15,014,483 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36714,153,770 - 14,847,413 (-)NCBINCBI36Build 36hg18NCBI36
Build 34713,988,847 - 14,654,128NCBI
Celera714,163,789 - 14,859,377 (-)NCBICelera
Cytogenetic Map7p21.2NCBI
HuRef714,066,966 - 14,764,852 (-)NCBIHuRef
CHM1_1714,184,411 - 14,880,671 (-)NCBICHM1_1
T2T-CHM13v2.0714,277,079 - 15,107,587 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v2714,235,562 - 14,932,596 (-)NCBI
Dgkb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8660,368,101 - 61,124,420 (+)NCBIGRCr8
mRatBN7.2654,640,948 - 55,397,210 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl654,641,614 - 55,397,043 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx654,944,919 - 55,700,844 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0655,259,803 - 56,015,739 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0654,718,536 - 55,474,194 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0657,516,351 - 58,277,385 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl657,516,713 - 58,277,279 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0667,113,446 - 67,580,128 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Rnor_5.0667,693,661 - 67,868,706 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4656,715,327 - 57,479,656 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1656,718,452 - 57,482,782 (+)NCBI
Celera653,755,433 - 54,502,520 (+)NCBICelera
RH 3.4 Map6394.3RGD
Cytogenetic Map6q21NCBI
Dgkb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541017,676,930 - 18,243,869 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541017,677,375 - 18,304,409 (-)NCBIChiLan1.0ChiLan1.0
DGKB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2618,981,332 - 19,816,891 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1767,306,052 - 68,141,614 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0714,803,023 - 15,638,280 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1714,142,951 - 14,896,676 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl714,165,933 - 14,969,825 (-)Ensemblpanpan1.1panPan2
DGKB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11428,916,630 - 29,609,138 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1428,918,351 - 29,537,303 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1428,434,629 - 29,133,432 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01428,827,965 - 29,521,435 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1428,826,426 - 29,521,331 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11428,918,649 - 29,617,633 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01428,647,672 - 29,348,080 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01428,958,514 - 29,660,097 (-)NCBIUU_Cfam_GSD_1.0
Dgkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440511873,288,180 - 74,005,408 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936546963,064 - 1,615,984 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936546964,387 - 1,615,928 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DGKB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl983,569,932 - 84,510,087 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1983,571,927 - 84,358,712 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2992,175,666 - 92,485,017 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DGKB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12143,176,715 - 43,929,833 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2143,176,989 - 43,746,258 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604260,567,411 - 61,318,935 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dgkb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473915,186,115 - 15,821,907 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473915,185,294 - 15,821,293 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Dgkb
26679 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:851
Count of miRNA genes:451
Interacting mature miRNAs:553
Transcripts:ENSMUST00000040500
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142234Tmc1m3_mTmc1 modifier 3 (mouse)Not determined12541844077031203Mouse
1301163Eae16_msusceptibility to experimental allergic encephalomyelitis 16 (mouse)Not determined12772315841723301Mouse
13208568Bmiq11_mbody mass index QTL 11 (mouse)12805000040049999Mouse
1301037Cd4ts5_mCD4 T cell subset 5 (mouse)Not determined12835244442352581Mouse
1301723Fcsa7_mfemoral cross-sectional area 7 (mouse)Not determined12949100443491112Mouse
27226753Femd7_mfemur midshaft diameter 7, 10 week (mouse)12955000084146774Mouse
14746972Manh72_mmandible shape 72 (mouse)121061528144615281Mouse
10401249Bglu15_mblood glucose level 15 (mouse)Not determined121062064244620809Mouse
13524843Ppiq8_mprepulse inhibition QTL 8 (mouse)121104319450945796Mouse
13207568Tcq14_mtotal cholesterol QTL 14 (mouse)121166000197176774Mouse
4141516slwr_mslowlearner (mouse)Not determined1239247546392614Mouse
13524839Ppiq10_mprepulse inhibition QTL 10 (mouse)121304319554945798Mouse
10043977Obq34_mobesity QTL 34 (mouse)Not determined121514733149147331Mouse
1558978Cplaq10_mcircadian period of locomotor activity 10 (mouse)Not determined121534102679040364Mouse
26884413Bzwq9_mbi-zygomatic width QTL 9, 10 week (mouse)121615000147746783Mouse
1301574Lmblgq5_mlimb length QTL 5 (mouse)Not determined121759644780956883Mouse
15039339Nmrs29_mNAFLD-associated magnetic resonance shift 29 (mouse)121782585251825852Mouse
10043848Hdlq90_mHDL QTL 90 (mouse)Not determined121783993951840081Mouse
1300870Ath18_matherosclerosis 18 (mouse)Not determined121825996652260067Mouse
12904956Edlmmq10_mextensor digitorum longus muscle mass QTL 10 (mouse)121973983353739833Mouse
1302172Skts5_mskin tumor susceptibility 5 (mouse)Not determined122214886656149016Mouse
1301989Hdlq18_mHDL QTL 18 (mouse)Not determined122916068563160884Mouse
1300636Gct2_mgranulosa cell tumorigenesis 2 (mouse)Not determined122916068563160884Mouse
4141843Moen3_mmodifier of engrailed QTL 3 (mouse)Not determined122980158463801733Mouse
14747008Mancz10_mmandible centroid size 10 (mouse)122986352263863522Mouse
10402492Dipa8_mdrug induced psychomotor activation 8 (mouse)Not determined123493387268934019Mouse
1300818Bbaa10_mB.burgdorferi-associated arthritis 10 (mouse)Not determined123509100465511019Mouse
12879483Asp1_maudiogenic seizure prone 1 (mouse)123528549646801733Mouse
4142002Tbqt3_mtibia bone quality traits 3 (mouse)Not determined1235285496109936243Mouse

Markers in Region
26.MMHAP97FRA11.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381237,915,891 - 37,916,012UniSTSGRCm38
MGSCv371238,642,478 - 38,642,599UniSTSGRCm37
Celera1239,352,006 - 39,352,127UniSTS
Cytogenetic Map12A3UniSTS
Whitehead_YAC9 UniSTS
px-27c2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381237,883,060 - 37,883,201UniSTSGRCm38
MGSCv371238,609,647 - 38,609,788UniSTSGRCm37
Celera1239,319,214 - 39,319,355UniSTS
Cytogenetic Map12A3UniSTS
DGKB_583  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381238,631,444 - 38,632,182UniSTSGRCm38
MGSCv371239,358,031 - 39,358,769UniSTSGRCm37
Celera1240,055,959 - 40,056,697UniSTS
Cytogenetic Map12A3UniSTS
Dgkb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map12A3UniSTS
cM Map1217.11UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001361686 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001361688 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_178681 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515070 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006515071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017315019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC116471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC141479 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157494 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC157821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC166996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK032509 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK038544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047682 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK047792 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK083222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139408 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK161933 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW493391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070461 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BG088459 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CJ128305 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009742 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT025577 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000040500   ⟹   ENSMUSP00000037900
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,930,704 - 38,684,238 (+)Ensembl
GRCm38.p6 Ensembl1237,880,705 - 38,634,239 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220606
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1238,069,179 - 38,224,660 (+)Ensembl
GRCm38.p6 Ensembl1238,019,180 - 38,174,661 (+)Ensembl
RefSeq Acc Id: ENSMUST00000220990   ⟹   ENSMUSP00000152378
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,930,336 - 38,682,118 (+)Ensembl
GRCm38.p6 Ensembl1237,880,337 - 38,632,119 (+)Ensembl
RefSeq Acc Id: ENSMUST00000221098
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,930,715 - 38,225,083 (+)Ensembl
GRCm38.p6 Ensembl1237,880,716 - 38,175,084 (+)Ensembl
RefSeq Acc Id: ENSMUST00000221176   ⟹   ENSMUSP00000152446
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,930,173 - 38,186,839 (+)Ensembl
GRCm38.p6 Ensembl1237,880,174 - 38,136,840 (+)Ensembl
RefSeq Acc Id: ENSMUST00000221540
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,930,546 - 38,630,922 (+)Ensembl
GRCm38.p6 Ensembl1237,880,547 - 38,580,923 (+)Ensembl
RefSeq Acc Id: ENSMUST00000221686
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1238,067,713 - 38,069,773 (+)Ensembl
GRCm38.p6 Ensembl1238,017,714 - 38,019,774 (+)Ensembl
RefSeq Acc Id: ENSMUST00000222337   ⟹   ENSMUSP00000152460
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1237,867,725 - 38,032,009 (+)Ensembl
GRCm38.p6 Ensembl1237,817,726 - 37,982,010 (+)Ensembl
RefSeq Acc Id: NM_001361686   ⟹   NP_001348615
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,516 - 38,684,238 (+)NCBI
GRCm381237,880,517 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001361688   ⟹   NP_001348617
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,173 - 38,684,238 (+)NCBI
GRCm381237,880,174 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: NM_178681   ⟹   NP_848796
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,516 - 38,684,238 (+)NCBI
GRCm381237,880,517 - 38,634,239 (+)NCBI
MGSCv371238,607,292 - 39,359,997 (+)RGD
Celera1239,316,859 - 40,057,925 (+)RGD
cM Map12 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006515067   ⟹   XP_006515130
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,449 - 38,684,238 (+)NCBI
GRCm381237,880,449 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515068   ⟹   XP_006515131
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,169 - 38,684,238 (+)NCBI
GRCm381237,880,169 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515070   ⟹   XP_006515133
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,384 - 38,684,238 (+)NCBI
GRCm381237,880,551 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006515071   ⟹   XP_006515134
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,259 - 38,684,238 (+)NCBI
GRCm381237,880,260 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017315019   ⟹   XP_017170508
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391237,930,222 - 38,684,238 (+)NCBI
GRCm381237,880,169 - 38,634,239 (+)NCBI
Sequence:
RefSeq Acc Id: NP_848796   ⟸   NM_178681
- Peptide Label: isoform 2
- UniProtKB: Q6NS52 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006515131   ⟸   XM_006515068
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006515134   ⟸   XM_006515071
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006515130   ⟸   XM_006515067
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006515133   ⟸   XM_006515070
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_017170508   ⟸   XM_017315019
- Peptide Label: isoform X2
- UniProtKB: Q80TT5 (UniProtKB/Swiss-Prot),   Q6NS52 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001348617   ⟸   NM_001361688
- Peptide Label: isoform 2
RefSeq Acc Id: NP_001348615   ⟸   NM_001361686
- Peptide Label: isoform 1
- UniProtKB: Q6NS52 (UniProtKB/Swiss-Prot),   Q80TT5 (UniProtKB/Swiss-Prot)
RefSeq Acc Id: ENSMUSP00000152460   ⟸   ENSMUST00000222337
RefSeq Acc Id: ENSMUSP00000037900   ⟸   ENSMUST00000040500
RefSeq Acc Id: ENSMUSP00000152446   ⟸   ENSMUST00000221176
RefSeq Acc Id: ENSMUSP00000152378   ⟸   ENSMUST00000220990
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q6NS52-F1-model_v2 AlphaFold Q6NS52 1-802 view protein structure

Promoters
RGD ID:8678174
Promoter ID:EPDNEW_M17118
Type:initiation region
Name:Dgkb_1
Description:Mus musculus diacylglycerol kinase, beta , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17119  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381237,880,174 - 37,880,234EPDNEW
RGD ID:8678176
Promoter ID:EPDNEW_M17119
Type:single initiation site
Name:Dgkb_2
Description:Mus musculus diacylglycerol kinase, beta , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M17118  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381237,895,936 - 37,895,996EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2442474 AgrOrtholog
Ensembl Genes ENSMUSG00000036095 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000040500 ENTREZGENE
  ENSMUST00000040500.9 UniProtKB/Swiss-Prot
  ENSMUST00000220990 ENTREZGENE
  ENSMUST00000220990.2 UniProtKB/Swiss-Prot
  ENSMUST00000221176.2 UniProtKB/TrEMBL
  ENSMUST00000222337.2 UniProtKB/TrEMBL
Gene3D-CATH 1.10.238.110 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.200.40 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.30.60.20 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF-hand UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ATP-NAD_kinase_N UniProtKB/Swiss-Prot
  C1-like_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C1_DGKbeta-like_rpt1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  C1_DGKbeta_rpt2 UniProtKB/Swiss-Prot
  DAG_kinase_typeI_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DGK UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DGK_typeI_N_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Diacylglycerol_kin_accessory UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Diacylglycerol_kinase_cat_dom UniProtKB/Swiss-Prot
  EF-hand-dom_pair UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_Hand_1_Ca_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_hand_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NAD/diacylglycerol_kinase_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PE/DAG-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Recoverin UniProtKB/TrEMBL
KEGG Report mmu:217480 UniProtKB/Swiss-Prot
MGD MGI:2442474 ENTREZGENE
NCBI Gene 217480 ENTREZGENE
PANTHER CALCIUM BINDING PROTEINS UniProtKB/TrEMBL
  DIACYLGLYCEROL KINASE BETA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NEURONAL CALCIUM SENSOR 1 UniProtKB/TrEMBL
  PTHR11255 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam C1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DAG_kinase_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DAGK_acc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DAGK_cat UniProtKB/Swiss-Prot
  EF-hand_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Dgkb PhenoGen
PROSITE DAGK UniProtKB/Swiss-Prot
  EF_HAND_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  EF_HAND_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZF_DAG_PE_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DAGKa UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DAGKc UniProtKB/Swiss-Prot
  EFh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00109 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF111331 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47473 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF57889 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1Y7VLG5_MOUSE UniProtKB/TrEMBL
  DGKB_MOUSE UniProtKB/Swiss-Prot
  Q3TSN3_MOUSE UniProtKB/TrEMBL
  Q6NS52 ENTREZGENE
  Q80TT5 ENTREZGENE
  Q8BKY7_MOUSE UniProtKB/TrEMBL
  Q8BKZ7_MOUSE UniProtKB/TrEMBL
  Q8BUN1_MOUSE UniProtKB/TrEMBL
  Q8BXP8_MOUSE UniProtKB/TrEMBL
  Q8BYR9_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q80TT5 UniProtKB/Swiss-Prot