Asgr2 (asialoglycoprotein receptor 2)

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Gene: Asgr2 (asialoglycoprotein receptor 2) Mus musculus

Analyze

Symbol:

Asgr2

Name:

asialoglycoprotein receptor 2

RGD ID:

736035

MGI Page

MGI

Description:

Is expressed in embryo. Orthologous to human ASGR2 (asialoglycoprotein receptor 2).

Type:

protein-coding

RefSeq Status:

REVIEWED

Also known as:

A; AS; Asg; ASGP-R 2; ASGPR 2; ASGPR2; Asgr; Asgr-2; hepatic lectin 2; HL-2; mHL-2

RGD Orthologs

Human

Rat

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	ASGR2 (asialoglycoprotein receptor 2)	HGNC	Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Asgr2 (asialoglycoprotein receptor 2)	HGNC	Treefam, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, Ensembl
Pan paniscus (bonobo/pygmy chimpanzee):	ASGR2 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	ASGR2 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Asgr2 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	ASGR2 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (African green monkey):	LOC103242273 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Asgr2 (asialoglycoprotein receptor 2)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Other homologs ²
Homo sapiens (human):	ASGR1 (asialoglycoprotein receptor 1)	HGNC	OrthoDB
Homo sapiens (human):	CLEC10A (C-type lectin domain containing 10A)	HGNC	OrthoDB
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Asgr2 (asialoglycoprotein receptor 2)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Homo sapiens (human):	ASGR2 (asialoglycoprotein receptor 2)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|TreeFam)
Danio rerio (zebrafish):	si:ch211-170d8.5	Alliance	DIOPT (Ensembl Compara\|ZFIN)
Danio rerio (zebrafish):	si:ch73-361h17.1	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OrthoFinder\|OrthoInspector\|TreeFam\|ZFIN)
Drosophila melanogaster (fruit fly):	lectin-24Db	Alliance	DIOPT (InParanoid\|PhylomeDB)

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	69,983,470 - 69,997,013 (+)	Ensembl
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	70,092,644 - 70,106,187 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,906,146 - 69,919,689 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	69,908,839 - 69,922,382 (+)	NCBI			mm8
Celera	11	77,641,512 - 77,655,117 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.99	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

COVID-19 (ISO)

dyskeratosis congenita (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1,2-dimethylhydrazine (EXP)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (EXP,ISO)

2,2',4,4',5,5'-hexachlorobiphenyl (ISO)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,2',5,5'-tetrachlorobiphenyl (ISO)

2,3,7,8-tetrachlorodibenzodioxine (ISO)

5-methoxy-2-\{[(4-methoxy-3,5-dimethylpyridin-2-yl)methyl]sulfinyl\}-1H-benzimidazole (ISO)

6-propyl-2-thiouracil (ISO)

acetamide (ISO)

aflatoxin B1 (ISO)

aflatoxin B2 (ISO)

amiodarone (ISO)

antirheumatic drug (ISO)

arsane (ISO)

arsenic atom (ISO)

benzbromarone (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[b]fluoranthene (EXP)

benzo[e]pyrene (ISO)

bisphenol A (EXP,ISO)

butanal (ISO)

carbon nanotube (EXP)

chrysene (EXP)

clofibrate (EXP,ISO)

copper atom (ISO)

copper(0) (ISO)

cyclosporin A (ISO)

diethylstilbestrol (ISO)

diuron (ISO)

ethanol (ISO)

flutamide (ISO)

folic acid (EXP)

furan (ISO)

Indeno[1,2,3-cd]pyrene (EXP)

L-ethionine (ISO)

methapyrilene (ISO)

methotrexate (ISO)

methoxychlor (ISO)

nickel atom (ISO)

nickel sulfate (ISO)

nimesulide (ISO)

omeprazole (ISO)

paracetamol (EXP,ISO)

pirinixic acid (ISO)

propanal (ISO)

propiconazole (EXP)

protein kinase inhibitor (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

tetrachloromethane (EXP,ISO)

tetracycline (EXP)

tetraphene (EXP)

thioacetamide (ISO)

titanium dioxide (EXP)

trichloroethene (EXP)

triclosan (ISO)

valproic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

bone mineralization (ISO)

endocytosis (IEA)

glycoprotein metabolic process (IMP)

lipid homeostasis (IMP)

regulation of protein stability (IMP)

Cellular Component

endoplasmic reticulum quality control compartment (ISO)

integral component of membrane (IEA)

membrane (IEA)

perinuclear region of cytoplasm (ISO)

Molecular Function

carbohydrate binding (IEA)

protein binding (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal blood coagulation (IAGP)

abnormal homeostasis (IAGP)

abnormal lipid homeostasis (IAGP)

increased sensitivity to induced morbidity/mortality (IAGP)

increased susceptibility to bacterial infection (IAGP)

References

References - curated


1.	MGD and Homologene mouse data transfer
2.	MGD data from the GO Consortium
3.	MGD IEA
4.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	RGD automated import pipeline
6.	RGD automated import pipeline for gene-chemical interactions
7.	Sanford JP, etal., DNA 1988 Dec;7(10):721-8.

Additional References at PubMed

PMID:1699290	PMID:1971252	PMID:2223888	PMID:7961705	PMID:8702886	PMID:12477932	PMID:12566080	PMID:15489334	PMID:18488037	PMID:19075021	PMID:19783995	PMID:20376577
PMID:21267068	PMID:21656538	PMID:25485912	PMID:26489654	PMID:27405760	PMID:30308156

Genomics

Comparative Map Data

Asgr2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	11	69,983,470 - 69,997,013 (+)	Ensembl
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	70,092,644 - 70,106,187 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	69,906,146 - 69,919,689 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	11	69,908,839 - 69,922,382 (+)	NCBI			mm8
Celera	11	77,641,512 - 77,655,117 (+)	NCBI		Celera
Cytogenetic Map	11	B3	NCBI
cM Map	11	42.99	NCBI

ASGR2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	17	7,101,322 - 7,115,700 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	17	7,101,322 - 7,115,538 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	17	7,004,641 - 7,018,130 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	6,945,365 - 6,958,852 (-)	NCBI	NCBI36		hg18	NCBI36
Build 34	17	6,945,364 - 6,958,353	NCBI
Celera	17	7,030,159 - 7,043,834 (-)	NCBI
Cytogenetic Map	17	p13.1	NCBI
HuRef	17	6,898,025 - 6,911,469 (-)	NCBI		HuRef
CHM1_1	17	7,013,411 - 7,026,899 (-)	NCBI		CHM1_1

Asgr2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	10	54,821,407 - 54,834,624 (+)	NCBI
Rnor_6.0 Ensembl	10	56,710,464 - 56,723,611 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	10	56,710,446 - 56,723,608 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	10	56,452,171 - 56,465,322 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	56,942,683 - 56,955,742 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	10	56,956,319 - 56,969,365 (+)	NCBI
Celera	10	53,973,403 - 53,986,468 (+)	NCBI		Celera
Cytogenetic Map	10	q24	NCBI

ASGR2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	17	7,119,432 - 7,133,520 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	7,119,432 - 7,133,520 (-)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	17	7,131,490 - 7,145,110 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

ASGR2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	5	32,111,984 - 32,119,003 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	5	32,112,365 - 32,123,785 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Asgr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936595	416,013 - 423,872 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ASGR2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	52,461,396 - 52,506,574 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	52,479,404 - 52,506,569 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	54,769,354 - 54,796,671 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103242273
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	6,458,498 - 6,474,692 (-)	NCBI
ChlSab1.1 Ensembl	16	6,458,408 - 6,473,706 (-)	Ensembl

Asgr2
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624786	9,728,949 - 9,753,438 (-)	NCBI

Position Markers

Asgr2

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	11	70,097,863 - 70,098,090	UniSTS	GRCm38
Celera	11	77,646,731 - 77,646,958	UniSTS
Cytogenetic Map	11	B3	UniSTS
cM Map	11	42.99	UniSTS

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
26884453	Sklq16_m	skull length QTL 16, 16 week (mouse)					11	3300000	72800000	Mouse
13208559	Wght10_m	weight 10 (mouse)					11	4000000	89000000	Mouse
13208558	Lgth12_m	body length 12 (mouse)					11	4000000	95000000	Mouse
1300905	Scc6_m	colon tumor susceptibility 6 (mouse)			Not determined		11	6930277	89128908	Mouse
1357859	Lvrq7_m	liver weight QTL 7 (mouse)			Not determined		11	12318637	118131898	Mouse
39128214	Lwq20_m	liver weight QTL 20 (mouse)					11	12318637	118131898	Mouse
4141894	Nidd6k_m	Nidd6 on KK-A (mouse)			Not determined			19174204	97007000	Mouse
10412246	Dfs2_m	dental fluorosis suseptibility 2 (mouse)			Not determined		11	21857364	95990405	Mouse
13208569	Bmiq10_m	body mass index QTL 10 (mouse)					11	36000000	85000000	Mouse
1301328	Mol4_m	modifier of LPS-response 4 (mouse)			Not determined		11	36391750	83590530	Mouse
1301788	Lbw8_m	lupus NZB x NZW 8 (mouse)			Not determined		11	36612460	70618665	Mouse
1301896	Tria1_m	T-cell receptor induced activation 1 (mouse)			Not determined		11	36722738	70723028	Mouse
4141853	Skmw17_m	skeletal muscle weight 17 (mouse)			Not determined		11	37190115	71190238	Mouse
10766457	Nwa3_m	New Zealand White autoimmunity 3 (mouse)					11	38125289	72125383	Mouse
11532698	Sluc36a_m	susceptibility to lung cancer 36a (mouse)					11	42365791	76365904	Mouse
11532699	Sluc36b_m	susceptibility to lung cancer 36b (mouse)					11	42365791	76365904	Mouse
4142300	Ctrq3_m	C. trachomatis resistance QTL 3 (mouse)			Not determined		11	44739211	76963931	Mouse
4141367	Inf1_m	acute ozone induced inflammation (mouse)			Not determined			44739211	113167183	Mouse
4141000	Nidd3_m	non-insulin-dependent diabetes mellitus 3 (mouse)			Not determined			45151201	79151308	Mouse
1302021	Nidd1n_m	non-insulin-dependent diabetes mellitus 1 in NSY (mouse)			Not determined		11	45275046	80087498	Mouse
1357878	Mastr_m	modifier of astrocytoma (mouse)			Not determined		11	45817754	89927907	Mouse
1300765	Bbaa4_m	B.burgdorferi-associated arthritis 4 (mouse)			Not determined		11	46294341	80294436	Mouse
1301988	Bmd11_m	bone mineral density 11 (mouse)			Not determined		11	46428581	80428696	Mouse
1301830	Ssta4_m	susceptibility to Salmonella typhimurium antigens 4 (mouse)			Not determined		11	50187365	84187585	Mouse
13524840	Ppiq9a_m	prepulse inhibition QTL 9a (mouse)					11	52603559	86603559	Mouse
1300774	Pgia7_m	proteoglycan induced arthritis 7 (mouse)			Not determined		11	53499762	87499911	Mouse
4141830	Pregq1_m	pregnancy QTL 1 (mouse)			Not determined		11	54235926	83842826	Mouse
4141875	Etax9_m	ethanol induced ataxia 9 (mouse)			Not determined			55394159	72319101	Mouse
4142121	Tmc1m2_m	Tmc1 modifier 2 (mouse)			Not determined		11	56973201	114267131	Mouse
1300664	Etohcta9_m	ethanol conditioned taste aversion 9 (mouse)			Not determined		11	57863834	91863932	Mouse
10053682	Eae45_m	experimental allergic encephalomyelitis susceptibility 45 (mouse)			Not determined		11	58599729	74863932	Mouse
1300924	Ity2_m	immunity to S. typhimurium 2 (mouse)			Not determined		1	58617204	87804412	Mouse
4141982	Skts-fp2_m	skin tumor susceptibility in FVB and PWK 2 (mouse)			Not determined			58828440	85175703	Mouse
1301987	Pid3_m	prior incubation determinant 3 (mouse)			Not determined		11	61795994	88808902	Mouse
1301319	Dautb4_m	dopamine uptake transporter binding 4 (mouse)			Not determined		11	62265179	96265327	Mouse
27226730	Tibmd1_m	tibia midshaft diameter 1, 5 week (mouse)					11	62700000	109500000	Mouse
1301999	Lmr15_m	leishmaniasis resistance 15 (mouse)			Not determined		11	63428581	81939647	Mouse
10044004	Stzid3_m	streptozotocin induced diabetes susceptibility 3 (mouse)			Not determined		11	63428581	94173092	Mouse
11039501	Ltpr6a_m	Leishmania tropica response 6a (mouse)					11	64939510	98939647	Mouse
11039502	Ltpr6b_m	Leishmania tropica response 6b (mouse)					11	64939510	98939647	Mouse
11039515	Ltpr6_m	Leishmania tropica response 6 (mouse)					11	64939510	98939647	Mouse
1301546	Pcir2_m	periosteal circumference 2 (mouse)			Not determined		11	66842594	100842826	Mouse
1357766	Si5lq6_m	serum IGFBP-5 level QTL 6 (mouse)			Not determined		11	66842594	100842826	Mouse
4141012	Femwf6_m	femur work to failure 6 (mouse)			Not determined			66842594	100842826	Mouse
1301833	Tbbmd5_m	total body bone mineral density 5 (mouse)			Not determined		11	66842594	100842826	Mouse
1300784	Prdt3_m	prion disease incubation time 3 (mouse)			Not determined		11	66842594	100842826	Mouse
1300628	Lgth6_m	body length 6 (mouse)			Not determined		11	66842594	100842826	Mouse
4142316	Ity2b_m	immunity to S. typhimurium 2b (mouse)			Not determined		11	67187365	79923086	Mouse
27226783	Tibl5_m	tibia length 5, 5 week (mouse)					11	68300000	102000000	Mouse
36049778	Ars6_m	antibody response to SARS-CoV 6, day 15, IgM (mouse)					11	69100000	72600000	Mouse
36049779	Ars7_m	antibody response to SARS-CoV 7, day 29, IgG1 (mouse)					11	69100000	72600000	Mouse
36049784	Ars8_m	antibody response to SARS-CoV 8, day 29, IgG2a+IgG2c (mouse)					11	69100000	72600000	Mouse
36049785	Ars9_m	antibody response to SARS-CoV 9, day 29, IgM (mouse)					11	69100000	72600000	Mouse
36049786	Ars10_m	antibody response to SARS-CoV 10, 4 days post-rechallenge, IgG2a+IgG2c (mouse)					11	69100000	72600000	Mouse
36049787	Ars11_m	antibody response to SARS-CoV 11, 4 days post-rechallenge, IgM (mouse)					11	69100000	72600000	Mouse
36049788	Ars1_m	antibody response to SARS-CoV 1, day 7, IgG1 (mouse)					11	69100000	72600000	Mouse
36049789	Ars2_m	antibody response to SARS-CoV 2, day 7, IgG2a+IgG2c (mouse)					11	69100000	72600000	Mouse
36049790	Ars3_m	antibody response to SARS-CoV 3, day 7, IgG2b (mouse)					11	69100000	72600000	Mouse
36049791	Ars4_m	antibody response to SARS-CoV 4, day 7, IgG3 (mouse)					11	69100000	72600000	Mouse
36049792	Ars5_m	antibody response to SARS-CoV 5, day 7, IgM (mouse)					11	69100000	72600000	Mouse
35673314	Ari2_m	antibody response to influenza 2, day 10, IgG3 (mouse)					11	69100000	72600000	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	702
Count of miRNA genes:	309
Interacting mature miRNAs:	343
Transcripts:	ENSMUST00000102572, ENSMUST00000124721, ENSMUST00000143772, ENSMUST00000179757
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001313925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001313926	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001313927	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_007493	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AI227223	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AL596185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC011197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466596	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CR936925	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	X53042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000102572 ⟹ ENSMUSP00000099632

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	70,092,644 - 70,106,187 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000124721 ⟹ ENSMUSP00000121189

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	70,092,748 - 70,105,411 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000143772 ⟹ ENSMUSP00000136505

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	70,092,683 - 70,105,861 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000179757

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	11	70,097,692 - 70,105,856 (+)	Ensembl

RefSeq Acc Id:

NM_001313925 ⟹ NP_001300854

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI

Sequence:

show sequence

GACCCAGCTCTTGCCTAGATTGGCCCCTCCTCCCTCTCACCTAGCTCCACTAGCACCACCTGTC
CCGTCTCCCAGGTTTAGCCCCTCTTTCTCTTTGGGCTCAGGCTGTCTCCGAAAGCCAGAGTCAG
CTCTCTATACCTTTAACAGGGATTCCAGTCTTAGCACAAACCCAAGTTCCATCTCTAAGGAAAT
CTCAGCTCAGTCTCAGATCTGTCTCCAGCCCTTAGGGCCATCATGGAGAAGGACTGTCAAGACA
TCCAGCAGCTGGACTCTGAGGAGAATGACCATCAGCTCAGTGGCGATGATGAACATGGCTCTCA
TGTGCAGGATCCTAGGATAGAAAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCT
CAGCGCCTCTGCTCCACGTTCCGCCTCAGTCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGG
TGGTCATCTGTGTGGTTTCATCTCAAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGA
AACCTTCAGCAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGGCTCTGGACACCCTCGGAGGT
AGCACAAACGCCATACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGG
CAGACCATTCCACATTGCTCTTTCACCTGAAGCACTTCCCAATGGATCTGCGAACCCTGACCTG
TCAGCTGGCGTACTTCCAGAGCAATGGCACGGAATGCTGCCCTGTTAACTGGGTGGAGTTCGGG
GGAAGCTGCTACTGGTTTTCTCGGGATGGGCTCACCTGGGCTGAGGCTGACCAGTACTGCCAGC
TGGAGAACGCCCACCTGCTGGTCATCAACTCCAGGGAGGAGCAGGACTTTGTTGTAAAGCACAG
GAGCCAGTTTCATATTTGGATAGGTCTTACCGACAGGGATGGCTCCTGGAAATGGGTGGATGGA
ACTGATTATAGAAGCAACTACAGGAATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATG
AACAGGGTGGAGGTGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTG
CCAGCAGGTGAACCGCTGGGTATGCGAAAAGAGACGGAACATCACCCACTAGGAGTCGGCTCGA
CCAATCCCCCACCCCGCCCCCACCCCCACATCCCCCACTAGGAGTCTGCTCAATCATGCCTCTG
CCCTACCTCCAGCCCCACACCACCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGA
CAGGGTCCCAAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATA
CCTTAGGAAGACTGAGAATCCCCCCTTCTGCACAATTTATTGCAATTGTTATAAATTTCGGCCT
TCTGAATGGAGTAGGAAAAAAAAGAGAAAGACTTGAAA

hide sequence

RefSeq Acc Id:

NM_001313926 ⟹ NP_001300855

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI

Sequence:

show sequence

GACCCAGCTCTTGCCTAGATTGGCCCCTCCTCCCTCTCACCTAGCTCCACTAGCACCACCTGTC
CCGTCTCCCAGGTTTAGCCCCTCTTTCTCTTTGGGCTCAGGCTGTCTCCGAAAGCCAGAGTCAG
CTCTCTATACCTTTAACAGGGCCATCATGGAGAAGGACTGTCAAGACATCCAGCAGCTGGACTC
TGAGGAGAATGACCATCAGCTCAGTGGCGATGATGAACATGGCTCTCATGTGCAGGATCCTAGG
ATAGAAAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCTCAGCGCCTCTGCTCCA
CGTTCCGCCTCAGTCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGGTGGTCATCTGTGTGGT
TTCATCTCAAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTT
TCCTCCAGCACCCTGATGGAGTTCGGGGCTCTGGACACCCTCGGAGGTAGCACAAACGCCATAC
TGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCATTCCACATT
GCTCTTTCACCTGAAGCACTTCCCAATGGATCTGCGAACCCTGACCTGTCAGCTGGCGTACTTC
CAGAGCAATGGCACGGAATGCTGCCCTGTTAACTGGGTGGAGTTCGGGGGAAGCTGCTACTGGT
TTTCTCGGGATGGGCTCACCTGGGCTGAGGCTGACCAGTACTGCCAGCTGGAGAACGCCCACCT
GCTGGTCATCAACTCCAGGGAGGAGCAGGACTTTGTTGTAAAGCACAGGAGCCAGTTTCATATT
TGGATAGGTCTTACCGACAGGGATGGCTCCTGGAAATGGGTGGATGGAACTGATTATAGAAGCA
ACTACAGGAATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATGAACAGGGTGGAGGTGA
AGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGC
TGGGTATGCGAAAAGAGACGGAACATCACCCACTAGGAGTCGGCTCGACCAATCCCCCACCCCG
CCCCCACCCCCACATCCCCCACTAGGAGTCTGCTCAATCATGCCTCTGCCCTACCTCCAGCCCC
ACACCACCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATG
AGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAG
AATCCCCCCTTCTGCACAATTTATTGCAATTGTTATAAATTTCGGCCTTCTGAATGGAGTAGGA
AAAAAAAGAGAAAGACTTGAAA

hide sequence

RefSeq Acc Id:

NM_001313927 ⟹ NP_001300856

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI

Sequence:

show sequence

GACCCAGCTCTTGCCTAGATTGGCCCCTCCTCCCTCTCACCTAGCTCCACTAGCACCACCTGTC
CCGTCTCCCAGGTTTAGCCCCTCTTTCTCTTTGGGCTCAGGCTGTCTCCGAAAGCCAGAGTCAG
CTCTCTATACCTTTAACAGCCTCTTTCCAGGCCCTTTCCTCAGCGCCTCTGCTCCACGTTCCGC
CTCAGTCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGGTGGTCATCTGTGTGGTTTCATCTC
AAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAGCAACTTTTCCTCCAG
CACCCTGATGGAGTTCGGGGCTCTGGACACCCTCGGAGGTAGCACAAACGCCATACTGACTTCC
TGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCATTCCACATTGCTCTTTC
ACCTGAAGCACTTCCCAATGGATCTGCGAACCCTGACCTGTCAGCTGGCGTACTTCCAGAGCAA
TGGCACGGAATGCTGCCCTGTTAACTGGGTGGAGTTCGGGGGAAGCTGCTACTGGTTTTCTCGG
GATGGGCTCACCTGGGCTGAGGCTGACCAGTACTGCCAGCTGGAGAACGCCCACCTGCTGGTCA
TCAACTCCAGGGAGGAGCAGGACTTTGTTGTAAAGCACAGGAGCCAGTTTCATATTTGGATAGG
TCTTACCGACAGGGATGGCTCCTGGAAATGGGTGGATGGAACTGATTATAGAAGCAACTACAGG
AATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATGAACAGGGTGGAGGTGAAGACTGTG
CTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGTGAACCGCTGGGTATG
CGAAAAGAGACGGAACATCACCCACTAGGAGTCGGCTCGACCAATCCCCCACCCCGCCCCCACC
CCCACATCCCCCACTAGGAGTCTGCTCAATCATGCCTCTGCCCTACCTCCAGCCCCACACCACC
CCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCCAAGCATGAGGAGGGG
TTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAAGACTGAGAATCCCCC
CTTCTGCACAATTTATTGCAATTGTTATAAATTTCGGCCTTCTGAATGGAGTAGGAAAAAAAAG
AGAAAGACTTGAAA

hide sequence

RefSeq Acc Id:

NM_007493 ⟹ NP_031519

RefSeq Status:

REVIEWED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	11	69,983,470 - 69,997,013 (+)	NCBI
GRCm38	11	70,092,644 - 70,106,187 (+)	NCBI
MGSCv37	11	69,906,146 - 69,919,689 (+)	RGD
Celera	11	77,641,512 - 77,655,117 (+)	RGD
cM Map	11		ENTREZGENE

Sequence:

show sequence

GACCCAGCTCTTGCCTAGATTGGCCCCTCCTCCCTCTCACCTAGCTCCACTAGCACCACCTGTC
CCGTCTCCCAGGTTTAGCCCCTCTTTCTCTTTGGGCTCAGGCTGTCTCCGAAAGCCAGAGTCAG
CTCTCTATACCTTTAACAGCCCTTAGGGCCATCATGGAGAAGGACTGTCAAGACATCCAGCAGC
TGGACTCTGAGGAGAATGACCATCAGCTCAGTGGCGATGATGAACATGGCTCTCATGTGCAGGA
TCCTAGGATAGAAAATCCACACTGGAAAGGGCAGCCTCTTTCCAGGCCCTTTCCTCAGCGCCTC
TGCTCCACGTTCCGCCTCAGTCTGCTCGCCCTGGCCTTCAACATCCTCCTGTTGGTGGTCATCT
GTGTGGTTTCATCTCAAAGCATACAGCTGCAAGAAGAGTTTCGGACCCTGAAAGAAACCTTCAG
CAACTTTTCCTCCAGCACCCTGATGGAGTTCGGGGCTCTGGACACCCTCGGAGGTAGCACAAAC
GCCATACTGACTTCCTGGTTAGCCCAACTGGAGGAGAAGCAGCAACAGCTAAAGGCAGACCATT
CCACATTGCTCTTTCACCTGAAGCACTTCCCAATGGATCTGCGAACCCTGACCTGTCAGCTGGC
GTACTTCCAGAGCAATGGCACGGAATGCTGCCCTGTTAACTGGGTGGAGTTCGGGGGAAGCTGC
TACTGGTTTTCTCGGGATGGGCTCACCTGGGCTGAGGCTGACCAGTACTGCCAGCTGGAGAACG
CCCACCTGCTGGTCATCAACTCCAGGGAGGAGCAGGACTTTGTTGTAAAGCACAGGAGCCAGTT
TCATATTTGGATAGGTCTTACCGACAGGGATGGCTCCTGGAAATGGGTGGATGGAACTGATTAT
AGAAGCAACTACAGGAATTGGGCCTTCACTCAGCCAGATAACTGGCAGGGCCATGAACAGGGTG
GAGGTGAAGACTGTGCTGAAATCCTGTCAGATGGCCATTGGAATGACAACTTCTGCCAGCAGGT
GAACCGCTGGGTATGCGAAAAGAGACGGAACATCACCCACTAGGAGTCGGCTCGACCAATCCCC
CACCCCGCCCCCACCCCCACATCCCCCACTAGGAGTCTGCTCAATCATGCCTCTGCCCTACCTC
CAGCCCCACACCACCCCAACATCCTCACTGGGGATACTGGAGCAAGGAAGAGAGACAGGGTCCC
AAGCATGAGGAGGGGTTATGGAAAACTGGAAAGGGCATGGCTCTATGGTCTCATACCTTAGGAA
GACTGAGAATCCCCCCTTCTGCACAATTTATTGCAATTGTTATAAATTTCGGCCTTCTGAATGG
AGTAGGAAAAAAAAGAGAAAGACTTGAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001300854	(Get FASTA)	NCBI Sequence Viewer
	NP_001300855	(Get FASTA)	NCBI Sequence Viewer
	NP_001300856	(Get FASTA)	NCBI Sequence Viewer
	NP_031519	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH11197	(Get FASTA)	NCBI Sequence Viewer
	CAA37211	(Get FASTA)	NCBI Sequence Viewer
	EDL12530	(Get FASTA)	NCBI Sequence Viewer
	EDL12531	(Get FASTA)	NCBI Sequence Viewer
	EDL12532	(Get FASTA)	NCBI Sequence Viewer
	EDL12533	(Get FASTA)	NCBI Sequence Viewer
	P24721	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:	NP_031519 ⟸ NM_007493
- Peptide Label:	isoform a
- UniProtKB:	P24721 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEKDCQDIQQLDSEENDHQLSGDDEHGSHVQDPRIENPHWKGQPLSRPFPQRLCSTFRLSLLAL AFNILLLVVICVVSSQSIQLQEEFRTLKETFSNFSSSTLMEFGALDTLGGSTNAILTSWLAQLE EKQQQLKADHSTLLFHLKHFPMDLRTLTCQLAYFQSNGTECCPVNWVEFGGSCYWFSRDGLTWA EADQYCQLENAHLLVINSREEQDFVVKHRSQFHIWIGLTDRDGSWKWVDGTDYRSNYRNWAFTQ PDNWQGHEQGGGEDCAEILSDGHWNDNFCQQVNRWVCEKRRNITH hide sequence

RefSeq Acc Id:	NP_001300854 ⟸ NM_001313925
- Peptide Label:	isoform a
- UniProtKB:	P24721 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEKDCQDIQQLDSEENDHQLSGDDEHGSHVQDPRIENPHWKGQPLSRPFPQRLCSTFRLSLLAL AFNILLLVVICVVSSQSIQLQEEFRTLKETFSNFSSSTLMEFGALDTLGGSTNAILTSWLAQLE EKQQQLKADHSTLLFHLKHFPMDLRTLTCQLAYFQSNGTECCPVNWVEFGGSCYWFSRDGLTWA EADQYCQLENAHLLVINSREEQDFVVKHRSQFHIWIGLTDRDGSWKWVDGTDYRSNYRNWAFTQ PDNWQGHEQGGGEDCAEILSDGHWNDNFCQQVNRWVCEKRRNITH hide sequence

RefSeq Acc Id:	NP_001300855 ⟸ NM_001313926
- Peptide Label:	isoform a
- UniProtKB:	P24721 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEKDCQDIQQLDSEENDHQLSGDDEHGSHVQDPRIENPHWKGQPLSRPFPQRLCSTFRLSLLAL AFNILLLVVICVVSSQSIQLQEEFRTLKETFSNFSSSTLMEFGALDTLGGSTNAILTSWLAQLE EKQQQLKADHSTLLFHLKHFPMDLRTLTCQLAYFQSNGTECCPVNWVEFGGSCYWFSRDGLTWA EADQYCQLENAHLLVINSREEQDFVVKHRSQFHIWIGLTDRDGSWKWVDGTDYRSNYRNWAFTQ PDNWQGHEQGGGEDCAEILSDGHWNDNFCQQVNRWVCEKRRNITH hide sequence

RefSeq Acc Id:	NP_001300856 ⟸ NM_001313927
- Peptide Label:	isoform b
- UniProtKB:	P24721 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MEFGALDTLGGSTNAILTSWLAQLEEKQQQLKADHSTLLFHLKHFPMDLRTLTCQLAYFQSNGT ECCPVNWVEFGGSCYWFSRDGLTWAEADQYCQLENAHLLVINSREEQDFVVKHRSQFHIWIGLT DRDGSWKWVDGTDYRSNYRNWAFTQPDNWQGHEQGGGEDCAEILSDGHWNDNFCQQVNRWVCEK RRNITH hide sequence

RefSeq Acc Id:

ENSMUSP00000121189 ⟸ ENSMUST00000124721

RefSeq Acc Id:

ENSMUSP00000136505 ⟸ ENSMUST00000143772

RefSeq Acc Id:

ENSMUSP00000099632 ⟸ ENSMUST00000102572

Protein Domains

C-type lectin

Promoters

RGD ID:

6820428

Promoter ID:

MM_KWN:8183

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Liver

Transcripts:

ENSMUST00000102572, OTTMUST00000013492, OTTMUST00000013493

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	11	69,905,941 - 69,906,441 (+)	MPROMDB

RGD ID:

8675286

Promoter ID:

EPDNEW_M15673

Type:

initiation region

Name:

Asgr2_1

Description:

Mus musculus asialoglycoprotein receptor 2 , transcript variant4, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	11	70,092,728 - 70,092,788	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:88082	AgrOrtholog
Ensembl Genes	ENSMUSG00000040963	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000099632	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000121189	UniProtKB/TrEMBL
	ENSMUSP00000136505	ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000102572	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000124721	UniProtKB/TrEMBL
	ENSMUST00000143772	ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH	3.10.100.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	C-type_lectin-like	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C-type_lectin-like/link_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C-type_lectin_CS	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CD209-like_CTLD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	CTDL_fold	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:11890	UniProtKB/Swiss-Prot
MGD	MGI:88082	ENTREZGENE
NCBI Gene	11890	ENTREZGENE
Pfam	Lectin_C	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Asgr2	PhenoGen
PROSITE	C_TYPE_LECTIN_1	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	C_TYPE_LECTIN_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	CLECT	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF56436	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	ASGR2_MOUSE	UniProtKB/Swiss-Prot
	B1AR35_MOUSE	UniProtKB/TrEMBL
	J3QMY0_MOUSE	UniProtKB/TrEMBL
	P24721	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar