Ucp1 (uncoupling protein 1 (mitochondrial, proton carrier)) - Rat Genome Database
Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ucp1 (uncoupling protein 1 (mitochondrial, proton carrier)) Mus musculus
Analyze
Symbol: Ucp1
Name: uncoupling protein 1 (mitochondrial, proton carrier)
RGD ID: 735822
MGI Page MGI
Description: Exhibits long-chain fatty acid binding activity; oxidative phosphorylation uncoupler activity; and purine ribonucleotide binding activity. Involved in several processes, including brown fat cell differentiation; diet induced thermogenesis; and positive regulation of cold-induced thermogenesis. Localizes to mitochondrial inner membrane. Is expressed in adipose tissue; bone; submandibular gland; testis; and thymus. Human ortholog(s) of this gene implicated in hypertension and type 2 diabetes mellitus. Orthologous to human UCP1 (uncoupling protein 1); PARTICIPATES IN Huntington's disease pathway; INTERACTS WITH (R)-noradrenaline; 17beta-estradiol; 2,4-dinitrophenol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI385626; mitochondrial brown fat uncoupling protein 1; Slc2; Slc25a7; solute carrier family 25 member 7; thermogenin; Ucp; UCP 1; uncoupling protein 1, mitochondrial; uncoupling protein, mitochondrial
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,016,977 - 84,025,085 (+)NCBIGRCm39mm39
GRCm38883,290,348 - 83,298,456 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,290,352 - 83,298,452 (+)EnsemblGRCm38mm10GRCm38
MGSCv37885,814,247 - 85,822,355 (+)NCBIGRCm37mm9NCBIm37
MGSCv36886,180,467 - 86,188,157 (+)NCBImm8
Celera887,564,747 - 87,572,801 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.65NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-taxifolin  (ISO)
(R)-noradrenaline  (EXP,ISO)
(S)-naringenin  (ISO)
15-acetyldeoxynivalenol  (ISO)
17beta-estradiol  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,4-dinitrophenol  (EXP)
3,3',5-triiodo-L-thyronine  (EXP,ISO)
3-\{1-[3-(dimethylamino)propyl]-1H-indol-3-yl\}-4-(1H-indol-3-yl)-1H-pyrrole-2,5-dione  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
9-cis-retinoic acid  (EXP,ISO)
abacavir  (ISO)
albuterol  (EXP)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP)
all-trans-retinol  (ISO)
ammonium chloride  (ISO)
arotinoid acid  (EXP)
arsane  (EXP)
arsenic atom  (EXP)
arsenous acid  (ISO)
ATP  (EXP,ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bucladesine  (ISO)
capsaicin  (ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
chromium atom  (EXP)
chrysene  (EXP)
clenbuterol  (EXP)
clofibrate  (EXP)
cobalt dichloride  (EXP)
curcumin  (EXP)
Cyclopamine  (ISO)
cyclophosphamide  (ISO)
D-glucose  (ISO)
dehydroepiandrosterone  (ISO)
dexamethasone  (EXP,ISO)
diarsenic trioxide  (ISO)
dioxygen  (EXP)
divanadium pentaoxide  (EXP)
dorsomorphin  (EXP)
enniatin  (ISO)
flavonoids  (ISO)
fonofos  (ISO)
glucose  (ISO)
glutathione  (ISO)
harmine  (EXP)
hexadecanoic acid  (ISO)
Indeno[1,2,3-cd]pyrene  (EXP)
indinavir  (EXP)
Iopanoic acid  (ISO)
isoprenaline  (ISO)
kaempferol  (ISO)
Licarin A  (EXP)
LY294002  (ISO)
mangiferin  (EXP)
mercury dichloride  (ISO)
methimazole  (ISO)
methoprene  (EXP)
methotrexate  (ISO)
methylmercury chloride  (ISO)
mono(2-ethylhexyl) phthalate  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP,ISO)
nevirapine  (ISO)
nickel sulfate  (EXP)
nicotinic acid  (EXP)
ochratoxin A  (ISO)
olanzapine  (ISO)
ozone  (EXP)
paracetamol  (EXP)
parathion  (ISO)
PD 0325901  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP)
permethrin  (ISO)
pirinixic acid  (EXP,ISO)
platycodin D  (EXP)
Prenalterol  (EXP)
prostaglandin E2  (ISO)
protein kinase inhibitor  (EXP,ISO)
Pyridostigmine bromide  (ISO)
quercetin  (EXP,ISO)
reactive oxygen species  (ISO)
resveratrol  (EXP,ISO)
selumetinib  (EXP)
stavudine  (EXP,ISO)
superoxide  (ISO)
T-2 toxin  (ISO)
telmisartan  (EXP)
terbufos  (ISO)
testosterone  (EXP)
tetraphene  (EXP)
titanium dioxide  (EXP)
tofacitinib  (ISO)
tributylstannane  (EXP)
trichostatin A  (ISO)
valproic acid  (ISO)
vanadium atom  (ISO)
vanadium(0)  (ISO)
zidovudine  (EXP,ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:1535334   PMID:1675193   PMID:1783403   PMID:1840565   PMID:1968046   PMID:1981050   PMID:2037298   PMID:2067848   PMID:2563260   PMID:2999153   PMID:3410843   PMID:7613031  
PMID:7613034   PMID:7671815   PMID:7713493   PMID:7759105   PMID:8009369   PMID:8228167   PMID:8264627   PMID:8334700   PMID:8649810   PMID:8661708   PMID:8675663   PMID:8833158  
PMID:8858346   PMID:9060410   PMID:9070925   PMID:9133562   PMID:9139827   PMID:9403069   PMID:9405372   PMID:9559644   PMID:9600108   PMID:9680377   PMID:9886838   PMID:10050760  
PMID:10349636   PMID:10491617   PMID:10497167   PMID:10748195   PMID:10973929   PMID:10982846   PMID:11001779   PMID:11017142   PMID:11042159   PMID:11076861   PMID:11239487   PMID:11239492  
PMID:11256954   PMID:11279075   PMID:11780125   PMID:11784294   PMID:11829740   PMID:11890396   PMID:11940593   PMID:11986368   PMID:12032159   PMID:12172784   PMID:12221093   PMID:12381524  
PMID:12439655   PMID:12466851   PMID:12475182   PMID:12477932   PMID:12525499   PMID:12569166   PMID:12588883   PMID:12746468   PMID:12910269   PMID:12912909   PMID:12941933   PMID:14613927  
PMID:14651853   PMID:14668353   PMID:14681479   PMID:14749529   PMID:14974682   PMID:14988240   PMID:15024092   PMID:15036332   PMID:15192081   PMID:15208325   PMID:15489334   PMID:15567149  
PMID:15677488   PMID:15684380   PMID:15687481   PMID:15695816   PMID:15855324   PMID:15896707   PMID:15917810   PMID:15924571   PMID:15964803   PMID:16135818   PMID:16141072   PMID:16141073  
PMID:16150499   PMID:16160864   PMID:16219308   PMID:16368788   PMID:16395600   PMID:16451125   PMID:16469807   PMID:16543238   PMID:16595854   PMID:16831128   PMID:16876797   PMID:16914547  
PMID:17164436   PMID:17194736   PMID:17202129   PMID:17283342   PMID:17347313   PMID:17456798   PMID:17670746   PMID:17884939   PMID:17923681   PMID:17972916   PMID:17996719   PMID:18061577  
PMID:18188184   PMID:18195045   PMID:18237274   PMID:18349383   PMID:18471433   PMID:18489899   PMID:18614015   PMID:18678870   PMID:18687806   PMID:18719582   PMID:18719589   PMID:18845643  
PMID:19117550   PMID:19176352   PMID:19187776   PMID:19247431   PMID:19351809   PMID:19404401   PMID:19622065   PMID:19641492   PMID:19690063   PMID:19705265   PMID:19737523   PMID:19779754  
PMID:19782026   PMID:19833890   PMID:19906816   PMID:19958747   PMID:20028987   PMID:20193037   PMID:20200519   PMID:20227385   PMID:20238096   PMID:20333300   PMID:20399150   PMID:20399195  
PMID:20416274   PMID:20417612   PMID:20466728   PMID:20619316   PMID:20660060   PMID:20686481   PMID:20826705   PMID:20837639   PMID:21048077   PMID:21070590   PMID:21267068   PMID:21321536  
PMID:21501347   PMID:21873635   PMID:21987829   PMID:22241835   PMID:22326222   PMID:22389706   PMID:22531154   PMID:22676960   PMID:22859371   PMID:22952235   PMID:22961106   PMID:23063128  
PMID:23217261   PMID:23302779   PMID:23386414   PMID:23404793   PMID:23499423   PMID:23644163   PMID:23682123   PMID:23717545   PMID:23751871   PMID:23757405   PMID:23823482   PMID:23907538  
PMID:23987512   PMID:24059847   PMID:24129192   PMID:24194600   PMID:24196706   PMID:24204965   PMID:24290753   PMID:24337908   PMID:24343897   PMID:24386355   PMID:24416310   PMID:24468941  
PMID:24586592   PMID:24627558   PMID:24703692   PMID:24769119   PMID:24771016   PMID:24876128   PMID:24953778   PMID:24981835   PMID:24999927   PMID:25135951   PMID:25543145   PMID:25576051  
PMID:25578880   PMID:25605929   PMID:25742717   PMID:25825499   PMID:25848030   PMID:25863250   PMID:25955208   PMID:25956583   PMID:25968336   PMID:26001964   PMID:26041126   PMID:26055106  
PMID:26070086   PMID:26132918   PMID:26137441   PMID:26341476   PMID:26395755   PMID:26518386   PMID:26525534   PMID:26568450   PMID:26578713   PMID:26586424   PMID:26586443   PMID:26635001  
PMID:26636187   PMID:26659641   PMID:26670611   PMID:26673120   PMID:26714852   PMID:26733201   PMID:26767982   PMID:26769382   PMID:26808348   PMID:26841864   PMID:26854223   PMID:26884382  
PMID:26914475   PMID:26963625   PMID:27027295   PMID:27185876   PMID:27264172   PMID:27374330   PMID:27408775   PMID:27437788   PMID:27453471   PMID:27492130   PMID:27508873   PMID:27548521  
PMID:27571348   PMID:27621146   PMID:27622583   PMID:27626380   PMID:27647490   PMID:27681418   PMID:27720451   PMID:27740871   PMID:27750036   PMID:27760309   PMID:27777310   PMID:27777311  
PMID:27881400   PMID:27916644   PMID:27926859   PMID:27986537   PMID:28049691   PMID:28109720   PMID:28181539   PMID:28276603   PMID:28291835   PMID:28324027   PMID:28358328   PMID:28375845  
PMID:28380374   PMID:28408438   PMID:28481291   PMID:28580280   PMID:28614293   PMID:28630339   PMID:28655717   PMID:28679625   PMID:28694163   PMID:28696252   PMID:28763438   PMID:28768181  
PMID:28794154   PMID:28811495   PMID:28988821   PMID:29021624   PMID:29077876   PMID:29107292   PMID:29111497   PMID:29131158   PMID:29166590   PMID:29203476   PMID:29212043   PMID:29263365  
PMID:29311303   PMID:29320702   PMID:29343498   PMID:29424439   PMID:29472592   PMID:29539416   PMID:29543863   PMID:29688375   PMID:29692364   PMID:29715048   PMID:29728617   PMID:29746591  
PMID:29769150   PMID:29795232   PMID:29844467   PMID:29890133   PMID:29914852   PMID:29996716   PMID:30022159   PMID:30037926   PMID:30044978   PMID:30072816   PMID:30078553   PMID:30126161  
PMID:30177570   PMID:30184507   PMID:30218749   PMID:30277793   PMID:30295852   PMID:30335158   PMID:30352954   PMID:30353008   PMID:30427862   PMID:30449620   PMID:30456392   PMID:30641938  
PMID:30807213   PMID:30917000   PMID:30938680   PMID:31000437   PMID:31067456   PMID:31186471   PMID:31189119   PMID:31341297   PMID:31361546   PMID:31369546   PMID:31433978   PMID:31619741  
PMID:31678001   PMID:31714796   PMID:31743040   PMID:31751350   PMID:31767164   PMID:31918922   PMID:31919095   PMID:32005798   PMID:32035087   PMID:32099945   PMID:32144202   PMID:32179129  
PMID:32184391   PMID:32273338   PMID:32310225   PMID:32473155   PMID:32629174   PMID:32715748   PMID:33037202   PMID:33065161   PMID:33107819  


Genomics

Comparative Map Data
Ucp1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,016,977 - 84,025,085 (+)NCBIGRCm39mm39
GRCm38883,290,348 - 83,298,456 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,290,352 - 83,298,452 (+)EnsemblGRCm38mm10GRCm38
MGSCv37885,814,247 - 85,822,355 (+)NCBIGRCm37mm9NCBIm37
MGSCv36886,180,467 - 86,188,157 (+)NCBImm8
Celera887,564,747 - 87,572,801 (+)NCBICelera
Cytogenetic Map8C2NCBI
cM Map839.65NCBI
UCP1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl4140,559,431 - 140,568,961 (-)EnsemblGRCh38hg38GRCh38
GRCh384140,555,770 - 140,568,961 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh374141,481,014 - 141,489,989 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 364141,700,500 - 141,709,457 (-)NCBINCBI36hg18NCBI36
Build 344141,838,654 - 141,847,612NCBI
Celera4138,811,044 - 138,819,947 (-)NCBI
Cytogenetic Map4q31.1NCBI
HuRef4137,211,503 - 137,220,406 (-)NCBIHuRef
CHM1_14141,458,398 - 141,467,306 (-)NCBICHM1_1
Ucp1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01924,456,976 - 24,464,808 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,456,976 - 24,464,807 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,434,980 - 35,442,812 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,527,548 - 26,535,621 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11926,532,373 - 26,540,447 (-)NCBI
Celera1924,348,444 - 24,356,517 (-)NCBICelera
Cytogenetic Map19q11NCBI
Ucp1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554283,274,810 - 3,283,237 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554283,253,363 - 3,282,518 (+)NCBIChiLan1.0ChiLan1.0
UCP1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.14144,230,858 - 144,239,803 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl4144,230,858 - 144,240,178 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v04132,921,033 - 132,930,714 (-)NCBIMhudiblu_PPA_v0panPan3
UCP1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1192,254,881 - 2,289,902 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Ucp1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049365357,258,146 - 7,265,475 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UCP1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1886,522,028 - 86,526,162 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2891,981,524 - 91,985,738 (-)NCBISscrofa10.2Sscrofa10.2susScr3
UCP1
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1 Ensembl787,492,195 - 87,502,665 (-)Ensembl
ChlSab1.1787,492,444 - 87,502,894 (-)NCBI
Ucp1
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004625006155,179 - 162,544 (-)NCBI

Position Markers
AI385626  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,290,525 - 83,290,642UniSTSGRCm38
MGSCv37885,814,424 - 85,814,541UniSTSGRCm37
Celera887,564,924 - 87,565,041UniSTS
Cytogenetic Map8C2UniSTS
cM Map838.0UniSTS
Whitehead/MRC_RH8990.51UniSTS
Ucp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37885,814,523 - 85,815,411UniSTSGRCm37
MGSCv37885,817,786 - 85,817,861UniSTSGRCm37
Celera887,568,254 - 87,568,329UniSTS
Celera887,565,023 - 87,565,878UniSTS
Cytogenetic Map8C2UniSTS
cM Map838.0UniSTS
cM Map838.0UniSTS
PMC164531P2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,290,674 - 83,291,454UniSTSGRCm38
MGSCv37885,814,573 - 85,815,353UniSTSGRCm37
Celera887,565,073 - 87,565,820UniSTS
Cytogenetic Map8C2UniSTS
cM Map838.0UniSTS
Ucp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,293,887 - 83,293,962UniSTSGRCm38
MGSCv37885,817,786 - 85,817,861UniSTSGRCm37
Celera887,568,254 - 87,568,329UniSTS
Cytogenetic Map8C2UniSTS
Ucp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,290,624 - 83,291,512UniSTSGRCm38
MGSCv37885,814,523 - 85,815,411UniSTSGRCm37
Celera887,565,023 - 87,565,878UniSTS
Cytogenetic Map8C2UniSTS
cM Map838.0UniSTS
Ucp1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map8C2UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:100
Count of miRNA genes:84
Interacting mature miRNAs:93
Transcripts:ENSMUST00000034146
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000034146   ⟹   ENSMUSP00000034146
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,290,352 - 83,298,452 (+)Ensembl
RefSeq Acc Id: NM_009463   ⟹   NP_033489
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,016,977 - 84,025,085 (+)NCBI
GRCm38883,290,348 - 83,298,456 (+)ENTREZGENE
MGSCv37885,814,247 - 85,822,355 (+)RGD
Celera887,564,747 - 87,572,801 (+)RGD
cM Map8 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033489   ⟸   NM_009463
- UniProtKB: P12242 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000034146   ⟸   ENSMUST00000034146

Promoters
RGD ID:8667591
Promoter ID:EPDNEW_M11827
Type:multiple initiation site
Name:Ucp1_1
Description:Mus musculus uncoupling protein 1 (mitochondrial, proton carrier), mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,290,352 - 83,290,412EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98894 AgrOrtholog
Ensembl Genes ENSMUSG00000031710 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000034146 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000034146 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.50.40.10 UniProtKB/Swiss-Prot
InterPro Mit_uncoupling_UCP-like UniProtKB/Swiss-Prot
  Mitochondrial_sb/sol_carrier UniProtKB/Swiss-Prot
  Mt_carrier_dom_sf UniProtKB/Swiss-Prot
  UCP1 UniProtKB/Swiss-Prot
KEGG Report mmu:22227 UniProtKB/Swiss-Prot
MGD MGI:98894 ENTREZGENE
NCBI Gene 22227 ENTREZGENE
PANTHER PTHR45618:SF19 UniProtKB/Swiss-Prot
Pfam Mito_carr UniProtKB/Swiss-Prot
PhenoGen Ucp1 PhenoGen
PRINTS MTUNCOUPLING UniProtKB/Swiss-Prot
PROSITE SOLCAR UniProtKB/Swiss-Prot
Superfamily-SCOP SSF103506 UniProtKB/Swiss-Prot
UniGene Mm.4177 ENTREZGENE
UniProt P12242 ENTREZGENE, UniProtKB/Swiss-Prot