Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: OTOP1 (otopetrin 1) Homo sapiens
Analyze
Symbol: OTOP1
Name: otopetrin 1
Description: Exhibits proton channel activity. Involved in proton transmembrane transport. Predicted to localize to integral component of plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: hOtop1; MGC163302; MGC163304; otopetrin-1; proton channel OTOP1
Orthologs:
Mus musculus (house mouse) : Otop1 (otopetrin 1)  MGI  Alliance
Rattus norvegicus (Norway rat) : Otop1 (otopetrin 1)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Otop1 (otopetrin 1)
Pan paniscus (bonobo/pygmy chimpanzee) : OTOP1 (otopetrin 1)
Canis lupus familiaris (dog) : OTOP1 (otopetrin 1)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Otop1 (otopetrin 1)
Sus scrofa (pig) : OTOP1 (otopetrin 1)
Chlorocebus sabaeus (African green monkey) : OTOP1 (otopetrin 1)
Heterocephalus glaber (naked mole-rat) : Otop1 (otopetrin 1)
more info ...
Related Pseudogenes: AC116050.1  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl44,188,803 - 4,226,889 (-)EnsemblGRCh38hg38GRCh38
GRCh3844,188,726 - 4,226,929 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh3744,190,530 - 4,228,621 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3644,241,431 - 4,279,522 (-)NCBINCBI36hg18NCBI36
Build 3444,308,601 - 4,346,693NCBI
Celera44,088,176 - 4,126,241 (-)NCBI
Cytogenetic Map4p16.3NCBI
HuRef44,126,235 - 4,164,307 (-)NCBIHuRef
CHM1_144,188,226 - 4,226,300 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
 
More on OTOP1
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735811
Created: 2004-02-06
Species: Homo sapiens
Last Modified: 2020-08-04
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.