COL12A1 (collagen type XII alpha 1 chain) - Rat Genome Database

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Gene: COL12A1 (collagen type XII alpha 1 chain) Homo sapiens
Analyze
Symbol: COL12A1
Name: collagen type XII alpha 1 chain
RGD ID: 735743
HGNC Page HGNC
Description: Predicted to be an extracellular matrix structural constituent conferring tensile strength. Involved in endodermal cell differentiation. Located in extracellular exosome. Colocalizes with collagen-containing extracellular matrix. Implicated in Ullrich congenital muscular dystrophy.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: BA209D8.1; BTHLM2; COL12A1L; collagen alpha-1(XII) chain; collagen type XII alpha 1; collagen type XII proteoglycan; collagen, type XII, alpha 1; collagen, type XII, alpha 1-like; DJ234P15.1; EDSMYP; procollagen, type xii, alpha 1; UCMD2
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl675,084,326 - 75,206,267 (-)EnsemblGRCh38hg38GRCh38
GRCh38675,084,326 - 75,206,262 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37675,794,042 - 75,915,769 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36675,850,762 - 75,972,343 (-)NCBINCBI36hg18NCBI36
Build 34675,850,762 - 75,972,290NCBI
Celera676,187,813 - 76,309,373 (-)NCBI
Cytogenetic Map6q13-q14.1NCBI
HuRef672,993,071 - 73,114,767 (-)NCBIHuRef
CHM1_1675,960,467 - 76,082,046 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (ISO)
1,2-dimethylhydrazine  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (EXP)
17beta-hydroxy-5alpha-androstan-3-one  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',5,5'-tetrachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-hydroxyphenyl retinamide  (ISO)
5-fluorouracil  (EXP)
6-propyl-2-thiouracil  (ISO)
9-cis-retinoic acid  (ISO)
acrolein  (EXP)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (EXP,ISO)
alpha-pinene  (EXP)
ammonium chloride  (ISO)
amphetamine  (ISO)
bazedoxifene  (EXP)
benzo[a]pyrene  (EXP,ISO)
Benzo[ghi]perylene  (ISO)
bexarotene  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP,ISO)
cadmium atom  (EXP)
carbamazepine  (EXP)
carbon nanotube  (ISO)
chlordecone  (ISO)
cisplatin  (EXP)
clobetasol  (ISO)
clothianidin  (EXP)
cobalt dichloride  (EXP,ISO)
copper atom  (EXP)
copper(0)  (EXP)
copper(II) sulfate  (EXP)
crocidolite asbestos  (ISO)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (ISO)
disulfiram  (EXP)
diuron  (ISO)
dopamine  (ISO)
dorsomorphin  (EXP)
doxorubicin  (EXP)
ethanol  (ISO)
fenamidone  (ISO)
fenoldopam  (ISO)
flavonoids  (ISO)
geldanamycin  (EXP)
genistein  (EXP,ISO)
indometacin  (EXP)
ivermectin  (EXP)
lipopolysaccharide  (EXP)
manganese atom  (EXP)
manganese(0)  (EXP)
manganese(II) chloride  (EXP)
mercury dibromide  (EXP)
methylmercury chloride  (EXP)
mifepristone  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N,N-diethyl-m-toluamide  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
N-nitrosodimethylamine  (ISO)
nickel atom  (EXP)
nickel sulfate  (EXP)
oxaliplatin  (EXP,ISO)
ozone  (EXP)
paracetamol  (EXP)
PCB138  (ISO)
pentane-2,3-dione  (ISO)
permethrin  (ISO)
Phenelzine  (ISO)
phenobarbital  (EXP)
phenylmercury acetate  (EXP)
PhIP  (ISO)
pirinixic acid  (ISO)
potassium chromate  (EXP)
progesterone  (EXP)
resveratrol  (EXP)
rotenone  (ISO)
SB 431542  (EXP)
silver atom  (ISO)
silver(0)  (ISO)
simvastatin  (ISO)
sodium arsenate  (ISO)
sodium arsenite  (EXP)
Soman  (ISO)
sunitinib  (EXP)
Tesaglitazar  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trimellitic anhydride  (ISO)
Triptolide  (ISO)
triptonide  (ISO)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
Abnormal palate morphology  (IAGP)
Abnormality of connective tissue  (IAGP)
Achilles tendon contracture  (IAGP)
Adducted thumb  (IAGP)
Ankle flexion contracture  (IAGP)
Areflexia  (IAGP)
Atrophic scars  (IAGP)
Autosomal dominant inheritance  (IAGP)
Autosomal recessive inheritance  (IAGP)
Axial muscle weakness  (IAGP)
Blue sclerae  (IAGP)
Camptodactyly of finger  (IAGP)
Cigarette-paper scars  (IAGP)
Congenital bilateral hip dislocation  (IAGP)
Congenital finger flexion contractures  (IAGP)
Congenital muscular dystrophy  (IAGP)
Congenital muscular torticollis  (IAGP)
Contractures involving the joints of the feet  (IAGP)
Curved toe phalanx  (IAGP)
Decreased fetal movement  (IAGP)
Decreased muscle mass  (IAGP)
Delayed ability to stand  (IAGP)
Delayed ability to walk  (IAGP)
Delayed fine motor development  (IAGP)
Diaphragmatic weakness  (IAGP)
Difficulty running  (IAGP)
Difficulty walking  (IAGP)
Distal joint laxity  (IAGP)
Distal muscle weakness  (IAGP)
Elbow flexion contracture  (IAGP)
Elevated circulating creatine kinase concentration  (IAGP)
EMG abnormality  (IAGP)
EMG: myopathic abnormalities  (IAGP)
Esotropia  (IAGP)
Exercise intolerance  (IAGP)
Facial palsy  (IAGP)
Failure to thrive  (IAGP)
Flexion contracture  (IAGP)
Foot dorsiflexor weakness  (IAGP)
Frequent falls  (IAGP)
Generalized amyotrophy  (IAGP)
Generalized hypotonia  (IAGP)
Generalized muscle weakness  (IAGP)
Global developmental delay  (IAGP)
Gowers sign  (IAGP)
High palate  (IAGP)
High, narrow palate  (IAGP)
Hip dislocation  (IAGP)
Hyperextensibility at wrists  (IAGP)
Hyperextensible skin  (IAGP)
Hyperkeratosis  (IAGP)
Hyperlordosis  (IAGP)
Hypoventilation  (IAGP)
Increased endomysial connective tissue  (IAGP)
Increased laxity of fingers  (IAGP)
Increased muscle lipid content  (IAGP)
Increased variability in muscle fiber diameter  (IAGP)
Infantile onset  (IAGP)
Joint hypermobility  (IAGP)
Juvenile cataract  (IAGP)
Keratosis pilaris  (IAGP)
Knee flexion contracture  (IAGP)
Kyphoscoliosis  (IAGP)
Kyphosis  (IAGP)
Laryngomalacia  (IAGP)
Limb-girdle muscle weakness  (IAGP)
Long toe  (IAGP)
Lumbar hyperlordosis  (IAGP)
Micrognathia  (IAGP)
Mildly elevated creatine kinase  (IAGP)
Motor delay  (IAGP)
Multiple joint contractures  (IAGP)
Muscular dystrophy  (IAGP)
Myopathy  (IAGP)
Myopia  (IAGP)
Neck muscle weakness  (IAGP)
Neonatal hypotonia  (IAGP)
Neonatal onset  (IAGP)
Nocturnal hypoventilation  (IAGP)
Pallor  (IAGP)
Patellar subluxation  (IAGP)
Pectus excavatum  (IAGP)
Pes planus  (IAGP)
Pes valgus  (IAGP)
Poor wound healing  (IAGP)
Progressive proximal muscle weakness  (IAGP)
Proximal muscle weakness  (IAGP)
Quadriceps muscle weakness  (IAGP)
Reduced maximal expiratory pressure  (IAGP)
Reduced muscle collagen VI  (IAGP)
Respiratory failure  (IAGP)
Rimmed vacuoles  (IAGP)
Scapular winging  (IAGP)
Scoliosis  (IAGP)
Short neck  (IAGP)
Shoulder flexion contracture  (IAGP)
Slender finger  (IAGP)
Soft skin  (IAGP)
Spinal rigidity  (IAGP)
Stooped posture  (IAGP)
Talipes equinovarus  (IAGP)
Tapered finger  (IAGP)
Toe walking  (IAGP)
Torticollis  (IAGP)
Waddling gait  (IAGP)
Weakness of facial musculature  (IAGP)
Wrist flexion contracture  (IAGP)
References

Additional References at PubMed
PMID:1427837   PMID:2668306   PMID:8207089   PMID:9129225   PMID:9143499   PMID:9344363   PMID:9826181   PMID:10066359   PMID:11697796   PMID:12045897   PMID:12477932   PMID:12890494  
PMID:14702039   PMID:15342556   PMID:15609093   PMID:16284948   PMID:16344560   PMID:17960519   PMID:19443461   PMID:19648885   PMID:20453000   PMID:20551380   PMID:21362503   PMID:21873635  
PMID:22573329   PMID:22969073   PMID:23013106   PMID:23154389   PMID:23376485   PMID:23414517   PMID:23624467   PMID:23658023   PMID:23979707   PMID:24262153   PMID:24334769   PMID:24769233  
PMID:24804215   PMID:25037231   PMID:25073002   PMID:26354767   PMID:26496610   PMID:27068509   PMID:27976729   PMID:28327460   PMID:28514442   PMID:28675934   PMID:29507755   PMID:29568061  
PMID:30106150   PMID:31273033   PMID:31273343   PMID:31315643   PMID:31432110   PMID:31509352   PMID:32239963   PMID:32356618   PMID:32890632   PMID:33096204   PMID:33129849   PMID:33961781  
PMID:34062975   PMID:34517516  


Genomics

Comparative Map Data
COL12A1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl675,084,326 - 75,206,267 (-)EnsemblGRCh38hg38GRCh38
GRCh38675,084,326 - 75,206,262 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37675,794,042 - 75,915,769 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36675,850,762 - 75,972,343 (-)NCBINCBI36hg18NCBI36
Build 34675,850,762 - 75,972,290NCBI
Celera676,187,813 - 76,309,373 (-)NCBI
Cytogenetic Map6q13-q14.1NCBI
HuRef672,993,071 - 73,114,767 (-)NCBIHuRef
CHM1_1675,960,467 - 76,082,046 (-)NCBICHM1_1
Col12a1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39979,506,269 - 79,628,423 (-)NCBIGRCm39mm39
GRCm39 Ensembl979,506,273 - 79,626,113 (-)Ensembl
GRCm38979,598,987 - 79,721,141 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl979,598,991 - 79,718,831 (-)EnsemblGRCm38mm10GRCm38
MGSCv37979,446,798 - 79,566,485 (-)NCBIGRCm37mm9NCBIm37
MGSCv36979,387,443 - 79,504,149 (-)NCBImm8
Celera976,744,488 - 76,862,823 (-)NCBICelera
Cytogenetic Map9E1NCBI
cM Map943.82NCBI
Col12a1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2880,547,592 - 80,665,665 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl880,547,593 - 80,665,686 (-)Ensembl
Rnor_6.0887,042,820 - 87,150,701 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl887,040,799 - 87,158,368 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0886,584,555 - 86,701,809 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4884,641,358 - 84,756,923 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1884,660,818 - 84,677,966 (-)NCBI
Celera880,273,757 - 80,389,987 (-)NCBICelera
RH 3.4 Map10859.0RGD
Cytogenetic Map8q31NCBI
Col12a1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554888,131,846 - 8,240,777 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554888,128,816 - 8,240,714 (+)NCBIChiLan1.0ChiLan1.0
COL12A1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1676,219,319 - 76,340,496 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl676,219,319 - 76,340,496 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0672,927,897 - 73,049,168 (-)NCBIMhudiblu_PPA_v0panPan3
COL12A1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11236,720,686 - 36,838,321 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1236,646,408 - 36,838,622 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1236,591,487 - 36,714,157 (-)NCBI
ROS_Cfam_1.01237,264,259 - 37,387,691 (-)NCBI
UMICH_Zoey_3.11236,828,942 - 36,945,160 (-)NCBI
UNSW_CanFamBas_1.01236,819,169 - 36,935,951 (-)NCBI
UU_Cfam_GSD_1.01236,947,167 - 37,063,520 (-)NCBI
Col12a1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494672,151,620 - 72,263,479 (-)NCBI
SpeTri2.0NW_004936788533,811 - 645,821 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
COL12A1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl190,744,429 - 90,875,118 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1190,744,409 - 90,875,127 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21101,693,208 - 101,890,887 (+)NCBISscrofa10.2Sscrofa10.2susScr3
COL12A1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11783,473 - 205,366 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl1786,992 - 204,504 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660585,895,568 - 6,019,042 (+)NCBIVero_WHO_p1.0
Col12a1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248192,085,654 - 2,200,843 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
RH48075  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,849,249 - 75,849,380UniSTSGRCh37
Build 36675,905,969 - 75,906,100RGDNCBI36
Celera676,243,003 - 76,243,134RGD
Cytogenetic Map6q12-q13UniSTS
HuRef673,048,393 - 73,048,524UniSTS
GeneMap99-GB4 RH Map6330.13UniSTS
NCBI RH Map6856.5UniSTS
SHGC-33702  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,794,057 - 75,794,186UniSTSGRCh37
Build 36675,850,777 - 75,850,906RGDNCBI36
Celera676,187,828 - 76,187,957RGD
Cytogenetic Map6q12-q13UniSTS
HuRef672,993,086 - 72,993,215UniSTS
SHGC-84655  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,914,610 - 75,914,911UniSTSGRCh37
Build 36675,971,330 - 75,971,631RGDNCBI36
Celera676,308,360 - 76,308,661RGD
Cytogenetic Map6q12-q13UniSTS
HuRef673,113,750 - 73,114,055UniSTS
TNG Radiation Hybrid Map635456.0UniSTS
SHGC-112458  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,899,195 - 75,899,520UniSTSGRCh37
Build 36675,955,915 - 75,956,240RGDNCBI36
Celera676,292,943 - 76,293,268RGD
Cytogenetic Map6q12-q13UniSTS
HuRef673,098,333 - 73,098,658UniSTS
TNG Radiation Hybrid Map635449.0UniSTS
RH47329  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,794,101 - 75,794,261UniSTSGRCh37
Build 36675,850,821 - 75,850,981RGDNCBI36
Celera676,187,872 - 76,188,032RGD
Cytogenetic Map6q12-q13UniSTS
HuRef672,993,130 - 72,993,290UniSTS
GeneMap99-GB4 RH Map6325.06UniSTS
NCBI RH Map6856.5UniSTS
COL12A1_1592  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,793,966 - 75,794,780UniSTSGRCh37
Build 36675,850,686 - 75,851,500RGDNCBI36
Celera676,187,737 - 76,188,551RGD
HuRef672,992,995 - 72,993,809UniSTS
D6S1478  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,830,621 - 75,830,721UniSTSGRCh37
Build 36675,887,341 - 75,887,441RGDNCBI36
Celera676,224,375 - 76,224,475RGD
Cytogenetic Map6q12-q13UniSTS
HuRef673,029,632 - 73,029,732UniSTS
Whitehead-YAC Contig Map6 UniSTS
STS-U73778  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,796,049 - 75,796,268UniSTSGRCh37
Build 36675,852,769 - 75,852,988RGDNCBI36
Celera676,189,824 - 76,190,043RGD
Cytogenetic Map6q12-q13UniSTS
HuRef672,995,082 - 72,995,301UniSTS
GeneMap99-GB4 RH Map6327.76UniSTS
NCBI RH Map6879.5UniSTS
STS-W72891  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37675,794,063 - 75,794,261UniSTSGRCh37
Build 36675,850,783 - 75,850,981RGDNCBI36
Celera676,187,834 - 76,188,032RGD
Cytogenetic Map6q12-q13UniSTS
HuRef672,993,092 - 72,993,290UniSTS
GeneMap99-GB4 RH Map6330.35UniSTS
NCBI RH Map6858.8UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2172
Count of miRNA genes:1001
Interacting mature miRNAs:1205
Transcripts:ENST00000322507, ENST00000345356, ENST00000416123, ENST00000419671, ENST00000425443, ENST00000474564, ENST00000483888, ENST00000486533, ENST00000493109, ENST00000511023
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component
High 1 3 1 1 1 1 1
Medium 1938 1602 729 124 263 40 3275 1101 707 175 936 1249 95 1201 2057 1
Low 420 637 922 431 318 357 1064 1078 2284 234 503 298 77 1 3 731 4
Below cutoff 25 728 68 64 850 64 13 9 714 8 12 47 2

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_042181 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004370 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_080645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011535434 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011535435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011535436 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017010252 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AF061871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH004088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI752603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ420501 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK057081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK307558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL080250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL096771 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL354664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC034715 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC146868 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BP286308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DA661773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF458206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U68139 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U73778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U73779 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000322507   ⟹   ENSP00000325146
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,084,326 - 75,206,053 (-)Ensembl
RefSeq Acc Id: ENST00000345356   ⟹   ENSP00000305147
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,086,471 - 75,205,851 (-)Ensembl
RefSeq Acc Id: ENST00000416123   ⟹   ENSP00000412864
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,086,547 - 75,202,792 (-)Ensembl
RefSeq Acc Id: ENST00000419671   ⟹   ENSP00000393217
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,133,376 - 75,152,189 (-)Ensembl
RefSeq Acc Id: ENST00000425443   ⟹   ENSP00000399812
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,084,326 - 75,119,473 (-)Ensembl
RefSeq Acc Id: ENST00000474564
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,143,204 - 75,146,285 (-)Ensembl
RefSeq Acc Id: ENST00000483888   ⟹   ENSP00000421216
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,087,190 - 75,205,822 (-)Ensembl
RefSeq Acc Id: ENST00000486533
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,177,652 - 75,188,464 (-)Ensembl
RefSeq Acc Id: ENST00000493109   ⟹   ENSP00000423423
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,113,022 - 75,119,058 (-)Ensembl
RefSeq Acc Id: ENST00000511023
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,089,160 - 75,101,911 (-)Ensembl
RefSeq Acc Id: ENST00000615798   ⟹   ENSP00000483232
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,084,326 - 75,205,907 (-)Ensembl
RefSeq Acc Id: ENST00000680102
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,197,506 - 75,206,267 (-)Ensembl
RefSeq Acc Id: ENST00000680981
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,084,366 - 75,090,459 (-)Ensembl
RefSeq Acc Id: ENST00000681086
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl675,084,366 - 75,088,540 (-)Ensembl
RefSeq Acc Id: NM_004370   ⟹   NP_004361
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38675,084,326 - 75,206,053 (-)NCBI
GRCh37675,794,042 - 75,915,623 (-)ENTREZGENE
Build 36675,850,762 - 75,972,343 (-)NCBI Archive
HuRef672,993,071 - 73,114,767 (-)ENTREZGENE
CHM1_1675,960,467 - 76,082,046 (-)NCBI
Sequence:
RefSeq Acc Id: NM_080645   ⟹   NP_542376
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38675,084,326 - 75,206,053 (-)NCBI
GRCh37675,794,042 - 75,915,623 (-)ENTREZGENE
Build 36675,850,762 - 75,972,343 (-)NCBI Archive
HuRef672,993,071 - 73,114,767 (-)ENTREZGENE
CHM1_1675,960,467 - 76,082,046 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011535434   ⟹   XP_011533736
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38675,084,326 - 75,206,051 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011535435   ⟹   XP_011533737
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38675,084,326 - 75,206,051 (-)NCBI
Sequence:
RefSeq Acc Id: XM_011535436   ⟹   XP_011533738
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source