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Gene: HOXA11 (homeobox A11) Homo sapiens
Symbol: HOXA11
Name: homeobox A11
Description: Predicted to have DNA-binding transcription factor activity, RNA polymerase II-specific. Predicted to be involved in several processes, including animal organ morphogenesis; embryonic morphogenesis; and positive regulation of cell differentiation. Localizes to the nucleoplasm. Implicated in radioulnar synostosis.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: homeo box 1I; homeobox a2; homeobox protein Hox-1I; homeobox protein Hox-A11; homeobox protein HOXA11; HOX1; HOX1I; RUSAT1
Mus musculus (house mouse) : Hoxa11 (homeobox A11)  MGI  Alliance
Rattus norvegicus (Norway rat) : Hoxa11 (homeobox A11)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Hoxa11 (homeobox A11)
Pan paniscus (bonobo/pygmy chimpanzee) : HOXA11 (homeobox A11)
Canis lupus familiaris (dog) : HOXA11 (homeobox A11)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Hoxa11 (homeobox A11)
Sus scrofa (pig) : HOXA11 (homeobox A11)
Chlorocebus sabaeus (African green monkey) : HOXA11 (homeobox A11)
Heterocephalus glaber (naked mole-rat) : Hoxa11 (homeobox A11)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Human AssemblyChrPosition (strand)SourceGenome Browsers
GRCh38 Ensembl727,181,157 - 27,185,232 (-)EnsemblGRCh38hg38GRCh38
GRCh38 Ensembl727,181,510 - 27,185,223 (-)EnsemblGRCh38hg38GRCh38
GRCh38727,181,157 - 27,185,232 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37727,220,776 - 27,224,835 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36727,187,301 - 27,191,360 (-)NCBINCBI36hg18NCBI36
Build 34726,994,368 - 26,998,070NCBI
Celera727,209,715 - 27,213,774 (-)NCBI
Cytogenetic Map7p15.2NCBI
HuRef727,101,338 - 27,105,401 (-)NCBIHuRef
CHM1_1727,220,497 - 27,224,560 (-)NCBICHM1_1
CRA_TCAGchr7v2727,271,961 - 27,276,020 (-)NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated


Comparative Map Data
Position Markers
miRNA Target Status


RNA-SEQ Expression


Nucleotide Sequences
Protein Sequences
Clinical Variants

Additional Information

External Database Links
More on HOXA11
Alliance Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735680
Created: 2004-02-06
Species: Homo sapiens
Last Modified: 2020-03-24
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.