Gmfb (glia maturation factor, beta) - Rat Genome Database

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Gene: Gmfb (glia maturation factor, beta) Mus musculus
Analyze
Symbol: Gmfb
Name: glia maturation factor, beta
RGD ID: 735554
MGI Page MGI
Description: Predicted to enable Arp2/3 complex binding activity. Acts upstream of or within learning and locomotory behavior. Predicted to be active in actin cortical patch. Is expressed in several structures, including central nervous system; genitourinary system; liver; retina layer; and spleen. Orthologous to human GMFB (glia maturation factor beta); INTERACTS WITH (S)-nicotine; 1,2-dimethylhydrazine; 1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 3110001H22Rik; 3110001O16Rik; AI851627; C79176; D14Ertd630; D14Ertd630e; glia maturation factor beta; GMF-beta
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391447,045,606 - 47,059,711 (-)NCBIGRCm39mm39
GRCm39 Ensembl1447,045,606 - 47,059,699 (-)Ensembl
GRCm381446,808,149 - 46,822,259 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1446,808,149 - 46,822,242 (-)EnsemblGRCm38mm10GRCm38
MGSCv371447,427,824 - 47,441,917 (-)NCBIGRCm37mm9NCBIm37
MGSCv361445,730,026 - 45,744,086 (-)NCBImm8
Celera1442,976,366 - 42,990,224 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1424.32NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
(S)-nicotine  (EXP)
1,2-dimethylhydrazine  (EXP)
1-methyl-4-phenyl-1,2,3,6-tetrahydropyridine  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
acetamide  (ISO)
aflatoxin M1  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (ISO)
butan-1-ol  (ISO)
cadmium dichloride  (EXP,ISO)
caffeine  (EXP)
chlorpyrifos  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diazinon  (ISO)
dibutyl phthalate  (EXP)
dichlorine  (ISO)
dicrotophos  (ISO)
doxorubicin  (ISO)
ethanol  (EXP)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
furan  (ISO)
hydrogen peroxide  (EXP)
hypochlorous acid  (EXP)
ivermectin  (ISO)
lead(0)  (ISO)
lead(2+)  (ISO)
lipopolysaccharide  (EXP)
maneb  (EXP)
methamphetamine  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
monosodium L-glutamate  (EXP)
nickel atom  (ISO)
nicotine  (EXP)
ozone  (EXP,ISO)
paracetamol  (EXP,ISO)
paraquat  (EXP)
perfluorododecanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
poly(I:C)  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
rimonabant  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
SB 203580  (EXP)
sevoflurane  (ISO)
sodium arsenate  (EXP)
sodium dichromate  (ISO)
sunitinib  (ISO)
temozolomide  (ISO)
thioacetamide  (ISO)
trichloroethene  (EXP)
valproic acid  (ISO)
vincristine  (ISO)
vorinostat  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11435704   PMID:12477932   PMID:12520002   PMID:12791701   PMID:14610273   PMID:15226823   PMID:15260123  
PMID:15451385   PMID:15489334   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16919269   PMID:17316572   PMID:18054898   PMID:18287559   PMID:18395194   PMID:18448421   PMID:18799693  
PMID:20517925   PMID:20696246   PMID:21677750   PMID:21873635   PMID:22315408   PMID:23462468   PMID:24457600   PMID:25016212   PMID:25754447   PMID:26101216   PMID:26232943   PMID:26514267  
PMID:28774213   PMID:30372685   PMID:31982500   PMID:32325033   PMID:32737763  


Genomics

Comparative Map Data
Gmfb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391447,045,606 - 47,059,711 (-)NCBIGRCm39mm39
GRCm39 Ensembl1447,045,606 - 47,059,699 (-)Ensembl
GRCm381446,808,149 - 46,822,259 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1446,808,149 - 46,822,242 (-)EnsemblGRCm38mm10GRCm38
MGSCv371447,427,824 - 47,441,917 (-)NCBIGRCm37mm9NCBIm37
MGSCv361445,730,026 - 45,744,086 (-)NCBImm8
Celera1442,976,366 - 42,990,224 (-)NCBICelera
Cytogenetic Map14C1NCBI
cM Map1424.32NCBI
GMFB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1454,474,484 - 54,489,026 (-)EnsemblGRCh38hg38GRCh38
GRCh381454,474,485 - 54,488,980 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh371454,941,203 - 54,955,698 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361454,010,959 - 54,025,494 (-)NCBINCBI36hg18NCBI36
Build 341454,010,958 - 54,025,494NCBI
Celera1434,990,739 - 35,005,274 (-)NCBI
Cytogenetic Map14q22.2NCBI
HuRef1435,103,853 - 35,118,388 (-)NCBIHuRef
CHM1_11454,879,910 - 54,894,446 (-)NCBICHM1_1
Gmfb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21520,069,923 - 20,081,005 (-)NCBImRatBN7.2
mRatBN7.2 Ensembl1520,067,263 - 20,080,331 (-)Ensembl
Rnor_6.01523,597,846 - 23,611,541 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1523,601,368 - 23,606,634 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01527,541,333 - 27,555,033 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41522,664,728 - 22,675,100 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11522,680,429 - 22,690,800 (-)NCBI
Celera1520,468,408 - 20,478,698 (-)NCBICelera
Cytogenetic Map15p14NCBI
Gmfb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554098,969,398 - 8,984,257 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554098,969,398 - 8,984,008 (+)NCBIChiLan1.0ChiLan1.0
GMFB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11453,339,536 - 53,353,873 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1453,343,142 - 53,348,840 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01435,061,469 - 35,076,234 (-)NCBIMhudiblu_PPA_v0panPan3
GMFB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1830,394,020 - 30,408,408 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl830,359,499 - 30,408,357 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha830,162,606 - 30,177,006 (-)NCBI
ROS_Cfam_1.0830,651,153 - 30,665,519 (-)NCBI
UMICH_Zoey_3.1830,255,325 - 30,269,686 (-)NCBI
UNSW_CanFamBas_1.0830,331,779 - 30,346,147 (-)NCBI
UU_Cfam_GSD_1.0830,697,308 - 30,711,696 (-)NCBI
Gmfb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864074,839,349 - 74,853,751 (+)NCBI
SpeTri2.0NW_004936697613,535 - 627,906 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GMFB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1183,846,672 - 183,863,392 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11183,846,672 - 183,863,396 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
GMFB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12431,643,202 - 31,655,819 (-)NCBI
Vero_WHO_p1.0NW_02366605319,872,348 - 19,887,054 (-)NCBI
Gmfb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473114,790,338 - 14,804,163 (+)NCBI

Position Markers
RH126624  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381446,810,407 - 46,810,614UniSTSGRCm38
MGSCv371447,430,082 - 47,430,289UniSTSGRCm37
Celera1442,978,630 - 42,978,837UniSTS
Cytogenetic Map14C1UniSTS
cM Map1418.0UniSTS
Whitehead/MRC_RH14508.77UniSTS
AI851627  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381446,809,937 - 46,810,017UniSTSGRCm38
MGSCv371447,429,612 - 47,429,692UniSTSGRCm37
Celera1442,978,159 - 42,978,239UniSTS
Cytogenetic Map14C1UniSTS
cM Map1418.0UniSTS
Whitehead/MRC_RH14508.77UniSTS
D14Ertd630e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381446,810,918 - 46,811,157UniSTSGRCm38
MGSCv371447,430,593 - 47,430,832UniSTSGRCm37
Celera1442,979,141 - 42,979,380UniSTS
Cytogenetic Map14C1UniSTS
cM Map1418.0UniSTS
Gmfb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381446,808,185 - 46,808,523UniSTSGRCm38
Celera1442,976,402 - 42,976,740UniSTS
Cytogenetic Map14C1UniSTS
cM Map1418.0UniSTS
Gmfb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381446,810,909 - 46,811,606UniSTSGRCm38
Celera1442,979,132 - 42,979,829UniSTS
Cytogenetic Map14C1UniSTS
cM Map1418.0UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226752Femd4_mfemur midshaft diameter 4, 5 week (mouse)14870000047000000Mouse
4141864Mrdq4_mmodifier of retinal degeneration QTL 4 (mouse)Not determined1254601848527625Mouse
1300544Hypn_mhyperinsulinemia (mouse)Not determined141543865949438808Mouse
1301372Sluc13_msusceptibility to lung cancer 13 (mouse)Not determined141910564753105769Mouse
1357589Kdnw2_mkidney weight 2 (mouse)Not determined1420837405121032392Mouse
1357527Epfpq1_mepididymal fat percentage QTL 1 (mouse)Not determined142101238271648361Mouse
14746973Manh76_mmandible shape 76 (mouse)142256526056565260Mouse
4142485Modor2_mmodifier of ocular retardation 2 (mouse)Not determined142492582457942312Mouse
13506929Recrq10_mrecombination rate in male meiosis QTL 10 (mouse)142820000060900000Mouse
10043886Cia49_mcollagen induced arthritis QTL 49 (mouse)Not determined142975953763759676Mouse
1300998Cia17_mcollagen induced arthritis 17 (mouse)Not determined143009779364097924Mouse
1300909Ath13_matherosclerosis 13 (mouse)Not determined143009779364097924Mouse
27226775Tibl7_mtibia length 7, 5 week (mouse)143060000048600000Mouse
27226744Metcl6_mmetatarsal-calcaneal length 6, 5 week (mouse)143060000052700000Mouse
27226774Tibl15_mtibia length 15, 10 week (mouse)143060000087700000Mouse
27226737Metcl12_mmetatarsal-calcaneal length 12, 10 week (mouse)143350000059200000Mouse
27226727Tibl21_mtibia length 21, 16 week (mouse)143440000052700000Mouse
1300625Cosz2_mcocaine seizure 2 (mouse)Not determined143532384068548287Mouse
10043887Cia50_mcollagen induced arthritis QTL 50 (mouse)Not determined143719272871192863Mouse
4142419Tgq26_mtriglyceride QTL 26 (mouse)Not determined4009986274099862Mouse
1301777Bglq15_mbody growth late QTL 15 (mouse)Not determined144272496776725144Mouse
1301424Skull21_mskull morphology 21 (mouse)Not determined144272496776725144Mouse
1300805Mors3_mmodifier of obesity related sterility 3 (mouse)Not determined144279982176799969Mouse
4141400Nilac8_mnicotine induced locomotor activity 8 (mouse)Not determined144282839876828596Mouse
1301091Bbaa21_mB.burgdorferi-associated arthritis 21 (mouse)Not determined144282839876828596Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2564
Count of miRNA genes:666
Interacting mature miRNAs:842
Transcripts:ENSMUST00000079314, ENSMUST00000111817, ENSMUST00000145958
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_022023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036158778 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB001732 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB050013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC093043 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF297220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013970 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK142014 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC040233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC049134 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466605 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000079314   ⟹   ENSMUSP00000078293
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,045,606 - 47,059,699 (-)Ensembl
GRCm38.p6 Ensembl1446,808,149 - 46,822,242 (-)Ensembl
RefSeq Acc Id: ENSMUST00000111817   ⟹   ENSMUSP00000107448
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,045,606 - 47,059,699 (-)Ensembl
GRCm38.p6 Ensembl1446,808,149 - 46,822,242 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145958
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,051,719 - 47,057,032 (-)Ensembl
GRCm38.p6 Ensembl1446,814,262 - 46,819,575 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226333   ⟹   ENSMUSP00000153896
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,048,936 - 47,055,876 (-)Ensembl
GRCm38.p6 Ensembl1446,811,479 - 46,818,419 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226842
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,052,655 - 47,055,250 (-)Ensembl
GRCm38.p6 Ensembl1446,815,198 - 46,817,793 (-)Ensembl
RefSeq Acc Id: ENSMUST00000226937   ⟹   ENSMUSP00000154491
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,048,861 - 47,059,641 (-)Ensembl
GRCm38.p6 Ensembl1446,811,404 - 46,822,184 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228065
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,049,131 - 47,059,613 (-)Ensembl
GRCm38.p6 Ensembl1446,811,674 - 46,822,156 (-)Ensembl
RefSeq Acc Id: ENSMUST00000228515
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1447,049,193 - 47,053,596 (-)Ensembl
GRCm38.p6 Ensembl1446,811,736 - 46,816,139 (-)Ensembl
RefSeq Acc Id: NM_022023   ⟹   NP_071306
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,699 (-)NCBI
GRCm381446,808,149 - 46,822,242 (-)NCBI
MGSCv371447,427,824 - 47,441,917 (-)RGD
Celera1442,976,366 - 42,990,224 (-)RGD
cM Map14 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030247909   ⟹   XP_030103769
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,711 (-)NCBI
GRCm381446,808,149 - 46,822,259 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247910   ⟹   XP_030103770
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,056,032 (-)NCBI
GRCm381446,808,149 - 46,818,575 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247911   ⟹   XP_030103771
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,551 (-)NCBI
GRCm381446,808,149 - 46,822,094 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247912   ⟹   XP_030103772
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,551 (-)NCBI
GRCm381446,808,149 - 46,822,094 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030247913   ⟹   XP_030103773
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,551 (-)NCBI
GRCm381446,808,149 - 46,822,094 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036158778   ⟹   XP_036014671
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391447,045,606 - 47,059,551 (-)NCBI
Reference Sequences
RefSeq Acc Id: NP_071306   ⟸   NM_022023
- UniProtKB: Q9CQI3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030103769   ⟸   XM_030247909
- Peptide Label: isoform X1
RefSeq Acc Id: XP_030103773   ⟸   XM_030247913
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030103772   ⟸   XM_030247912
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030103771   ⟸   XM_030247911
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030103770   ⟸   XM_030247910
- Peptide Label: isoform X2
RefSeq Acc Id: ENSMUSP00000107448   ⟸   ENSMUST00000111817
RefSeq Acc Id: ENSMUSP00000078293   ⟸   ENSMUST00000079314
RefSeq Acc Id: ENSMUSP00000153896   ⟸   ENSMUST00000226333
RefSeq Acc Id: ENSMUSP00000154491   ⟸   ENSMUST00000226937
RefSeq Acc Id: XP_036014671   ⟸   XM_036158778
- Peptide Label: isoform X3
Protein Domains
ADF-H

Promoters
RGD ID:8682058
Promoter ID:EPDNEW_M19059
Type:initiation region
Name:Gmfb_1
Description:Mus musculus glia maturation factor, beta , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381446,822,161 - 46,822,221EPDNEW
RGD ID:6825038
Promoter ID:MM_KWN:16455
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000079314,   NM_022023
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361447,441,546 - 47,442,046 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1927133 AgrOrtholog
Ensembl Genes ENSMUSG00000062014 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000078293 UniProtKB/Swiss-Prot
  ENSMUSP00000107448 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000153896 UniProtKB/TrEMBL
  ENSMUSP00000154491 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000079314 UniProtKB/Swiss-Prot
  ENSMUST00000111817 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000226333 UniProtKB/TrEMBL
  ENSMUST00000226937 UniProtKB/TrEMBL
Gene3D-CATH 3.40.20.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro ADF-H UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ADF-H/Gelsolin-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GMF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:63985 UniProtKB/Swiss-Prot
MGD MGI:1927133 ENTREZGENE
NCBI Gene 63985 ENTREZGENE
PANTHER PTHR11249 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Cofilin_ADF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Gmfb PhenoGen
PIRSF GMF-beta UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE ADF_H UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART ADF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A2I3BPS1_MOUSE UniProtKB/TrEMBL
  A0A2I3BR94_MOUSE UniProtKB/TrEMBL
  A7VJ98_MOUSE UniProtKB/TrEMBL
  GMFB_MOUSE UniProtKB/Swiss-Prot
  Q80X87_MOUSE UniProtKB/TrEMBL
  Q9CQI3 ENTREZGENE
UniProt Secondary Q3UQX5 UniProtKB/Swiss-Prot
  Q9ERL8 UniProtKB/Swiss-Prot