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Gene: Scn11a (sodium channel, voltage-gated, type XI, alpha) Mus musculus
Symbol: Scn11a
Name: sodium channel, voltage-gated, type XI, alpha
Description: ENCODES a protein that exhibits voltage-gated sodium channel activity; INVOLVED IN regulation of sensory perception of pain; sodium ion transport; ASSOCIATED WITH abnormal action potential; abnormal afterhyperpolarization; abnormal channel response; ASSOCIATED WITH Brugada syndrome (ortholog); Charcot-Marie-Tooth disease (ortholog); Congenital Pain Insensitivity (ortholog); FOUND IN axon; C-fiber; plasma membrane; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; pirinixic acid; potassium dichromate
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: NaN; NaT; NaV1.9; NSS2; sensory neuron sodium channel 2; SNS2; sodium channel protein type 11 subunit alpha; sodium channel protein type XI subunit alpha; sodium channel, voltage-gated, type XI, alpha polypeptide; voltage-gated sodium channel Nav1.9 variant a; voltage-gated sodium channel Nav1.9 variant b; voltage-gated sodium channel Nav1.9 variant c; voltage-gated sodium channel NAV1.9b; voltage-gated sodium channel subunit alpha Nav1.9
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
GRCm389119,753,763 - 119,825,456 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv379119,662,881 - 119,734,574 (-)NCBIGRCm37mm9NCBIm37
MGSCv369119,602,461 - 119,672,558 (-)NCBImm8
Celera9120,223,700 - 120,294,696 (-)NCBICelera
Cytogenetic Map9 F3NCBI
cM Map971.33NCBI
JBrowse: View Region in Genome Browser (JBrowse)

Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Phenotype Annotations
References - curated
References - uncurated
RGD Disease Portals


Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status


Nucleotide Sequences
Protein Sequences

Additional Information

External Database Links
More on Scn11a
Alliance Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735313
Created: 2004-02-06
Species: Mus musculus
Last Modified: 2019-09-12
Status: ACTIVE


RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.