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Gene: Ly6g5c (lymphocyte antigen 6 family member G5C) Rattus norvegicus
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Symbol: Ly6g5c
Name: lymphocyte antigen 6 family member G5C
RGD ID: 735180
Description: Predicted to have identical protein binding activity. Predicted to colocalize with external side of plasma membrane. Orthologous to human LY6G5C (lymphocyte antigen 6 family member G5C); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; ammonium chloride; bisphenol A.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: epididymal secretory protein 8; lymphocyte antigen 6 complex locus protein G5c; lymphocyte antigen 6 complex, locus G5C; re8
Orthologs:
Homo sapiens (human) : LY6G5C (lymphocyte antigen 6 family member G5C)  HGNC  Alliance
Mus musculus (house mouse) : Ly6g5c (lymphocyte antigen 6 complex, locus G5C)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ly6g5c (lymphocyte antigen 6 family member G5C)
Pan paniscus (bonobo/pygmy chimpanzee) : LY6G5C (lymphocyte antigen 6 family member G5C)
Canis lupus familiaris (dog) : LY6G5C (lymphocyte antigen 6 family member G5C)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ly6g5c (lymphocyte antigen 6 family member G5C)
Sus scrofa (pig) : LY6G5C (lymphocyte antigen 6 family member G5C)
Chlorocebus sabaeus (African green monkey) : LY6G5C (lymphocyte antigen 6 family member G5C)
Heterocephalus glaber (naked mole-rat) : Ly6g5c (lymphocyte antigen 6 family member G5C)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0205,100,415 - 5,104,631 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl205,100,415 - 5,104,494 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0207,173,674 - 7,177,753 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4203,773,183 - 3,777,262 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1203,773,409 - 3,777,489 (-)NCBI
Celera204,312,034 - 4,316,113 (+)NCBICelera
Cytogenetic Map20p12NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)
Damaging Variants

Additional Information

External Database Links
Nomenclature History
 
More on Ly6g5c
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735180
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2020-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.