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Gene: Chdh (choline dehydrogenase) Rattus norvegicus
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Symbol: Chdh
Name: choline dehydrogenase
Description: Exhibits choline dehydrogenase activity. Predicted to be involved in glycine betaine biosynthetic process from choline and oxidation-reduction process. Localizes to the mitochondrial inner membrane. Orthologous to human CHDH (choline dehydrogenase); PARTICIPATES IN choline metabolic pathway; glycine N-methyltransferase deficiency pathway; homocystinuria pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; 6-propyl-2-thiouracil; acrylamide.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: CDH; CHD; choline dehydrogenase precursor; choline dehydrogenase, mitochondrial; LOC290551; MGC93763
Orthologs:
Homo sapiens (human) : CHDH (choline dehydrogenase)  HGNC  Alliance
Mus musculus (house mouse) : Chdh (choline dehydrogenase)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Chdh (choline dehydrogenase)
Pan paniscus (bonobo/pygmy chimpanzee) : CHDH (choline dehydrogenase)
Canis lupus familiaris (dog) : CHDH (choline dehydrogenase)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Chdh (choline dehydrogenase)
Sus scrofa (pig) : CHDH (choline dehydrogenase)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0166,078,083 - 6,109,386 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl166,078,122 - 6,109,382 (+)Ensembl
Rnor_5.0166,009,399 - 6,042,916 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4165,349,304 - 5,380,800 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1165,349,301 - 5,380,794 (+)NCBI
Celera169,958,327 - 9,989,994 (-)NCBICelera
Cytogenetic Map16p16NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
Molecular Pathway Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
QTLs in Region (Rnor_6.0)
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 6.0)

Additional Information

External Database Links
Nomenclature History
 
More on Chdh
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735166
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-11-27
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.