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Pathways
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Gene: Lgi4 (leucine-rich repeat LGI family, member 4) Rattus norvegicus
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Symbol: Lgi4
Name: leucine-rich repeat LGI family, member 4
Description: Predicted to be involved in adult locomotory behavior; neurogenesis; and regulation of myelination. Predicted to localize to the extracellular space. Human ortholog(s) of this gene implicated in childhood absence epilepsy. Orthologous to human LGI4 (leucine rich repeat LGI family member 4); INTERACTS WITH 3,3',4,4',5-pentachlorobiphenyl; 6-propyl-2-thiouracil; alachlor.
Type: protein-coding
RefSeq Status: PROVISIONAL
Also known as: leucine-rich repeat LGI family member 4
Orthologs:
Homo sapiens (human) : LGI4 (leucine rich repeat LGI family member 4)  HGNC  Alliance
Mus musculus (house mouse) : Lgi4 (leucine-rich repeat LGI family, member 4)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Lgi4 (leucine rich repeat LGI family member 4)
Pan paniscus (bonobo/pygmy chimpanzee) : LGI4 (leucine rich repeat LGI family member 4)
Canis lupus familiaris (dog) : LGI4 (leucine rich repeat LGI family member 4)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Lgi4 (leucine rich repeat LGI family member 4)
Sus scrofa (pig) : LGI4 (leucine rich repeat LGI family member 4)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.0189,491,588 - 89,502,939 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0190,647,194 - 90,656,996 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4186,103,249 - 86,113,051 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1186,181,359 - 86,191,160 (+)NCBI
Celera180,664,083 - 80,673,885 (+)NCBICelera
Cytogenetic Map1q21NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model

Annotation    (Toggle Annotation Detail/Summary View)

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References - curated
References - uncurated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
  
More on Lgi4
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 735035
Created: 2004-02-05
Species: Rattus norvegicus
Last Modified: 2019-08-20
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.