Nup155 (nucleoporin 155) - Rat Genome Database

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Gene: Nup155 (nucleoporin 155) Mus musculus
Analyze
Symbol: Nup155
Name: nucleoporin 155
RGD ID: 734442
MGI Page MGI
Description: Predicted to be a structural constituent of nuclear pore. Acts upstream of or within with a positive effect on miRNA processing and protein localization to nucleus. Acts upstream of or within atrial cardiac muscle cell action potential; mRNA export from nucleus; and protein import into nucleus. Located in nuclear envelope. Human ortholog(s) of this gene implicated in familial atrial fibrillation. Orthologous to human NUP155 (nucleoporin 155).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 155 kDa nucleoporin; D930027M19Rik; mKIAA0791; nuclear pore complex protein Nup155; nucleoporin Nup155
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,135,861 - 8,189,343 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl158,138,757 - 8,190,731 (+)EnsemblGRCm39 Ensembl
GRCm38158,109,263 - 8,159,859 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,109,273 - 8,161,247 (+)EnsemblGRCm38mm10GRCm38
MGSCv37158,059,313 - 8,109,859 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36158,056,575 - 8,106,034 (+)NCBIMGSCv36mm8
Celera157,953,625 - 8,004,283 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map153.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(-)-demecolcine  (ISO)
1-chloro-2,4-dinitrobenzene  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',5,5'-tetrachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-dinitrotoluene  (ISO)
2,6-dinitrotoluene  (ISO)
2-hydroxypropanoic acid  (ISO)
2-palmitoylglycerol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (ISO)
4,4'-sulfonyldiphenol  (ISO)
4-(ethoxymethylene)-2-phenyloxazol-5-one  (ISO)
6-propyl-2-thiouracil  (ISO)
Aflatoxin B2 alpha  (ISO)
all-trans-retinoic acid  (ISO)
amitrole  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
arsenite(3-)  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bisphenol A  (ISO)
bucladesine  (ISO)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
chlorpyrifos  (EXP)
choline  (EXP)
cobalt dichloride  (ISO)
coumarin  (ISO)
coumestrol  (ISO)
cyclosporin A  (ISO)
deoxynivalenol  (EXP)
dexamethasone  (ISO)
diethylstilbestrol  (ISO)
doxorubicin  (ISO)
Enterolactone  (ISO)
enzyme inhibitor  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
FR900359  (ISO)
genistein  (ISO)
indometacin  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
medroxyprogesterone acetate  (ISO)
methidathion  (EXP)
methimazole  (ISO)
oxaliplatin  (ISO)
ozone  (EXP)
PCB138  (EXP)
pirinixic acid  (EXP)
rac-lactic acid  (ISO)
resveratrol  (ISO)
SB 431542  (ISO)
sodium arsenite  (ISO)
sulfadimethoxine  (ISO)
testosterone  (ISO)
tetrahydropalmatine  (ISO)
thapsigargin  (EXP)
titanium dioxide  (EXP)
topotecan  (ISO)
triadimefon  (ISO)
urethane  (ISO)
valproic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Prediction of the coding sequences of mouse homologues of KIAA gene: III. the complete nucleotide sequences of 500 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Aug 31;10(4):167-80.
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8458861   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12034489   PMID:12477932   PMID:12520002   PMID:12791264   PMID:14610273   PMID:16141072  
PMID:16141073   PMID:18799693   PMID:19070573   PMID:20360068   PMID:21677750   PMID:21873635   PMID:22922362   PMID:23086144   PMID:24457600   PMID:25737280   PMID:26496610   PMID:27113764  
PMID:28378742   PMID:29848314   PMID:30457570   PMID:30550785   PMID:31481660   PMID:32554809  


Genomics

Comparative Map Data
Nup155
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39158,135,861 - 8,189,343 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl158,138,757 - 8,190,731 (+)EnsemblGRCm39 Ensembl
GRCm38158,109,263 - 8,159,859 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl158,109,273 - 8,161,247 (+)EnsemblGRCm38mm10GRCm38
MGSCv37158,059,313 - 8,109,859 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36158,056,575 - 8,106,034 (+)NCBIMGSCv36mm8
Celera157,953,625 - 8,004,283 (+)NCBICelera
Cytogenetic Map15A1NCBI
cM Map153.82NCBI
NUP155
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38537,288,137 - 37,371,106 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl537,288,137 - 37,371,106 (-)EnsemblGRCh38hg38GRCh38
GRCh37537,288,239 - 37,371,208 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36537,327,698 - 37,406,954 (-)NCBINCBI36Build 36hg18NCBI36
Build 34537,327,697 - 37,406,954NCBI
Celera537,178,878 - 37,258,122 (-)NCBICelera
Cytogenetic Map5p13.2NCBI
HuRef537,244,125 - 37,323,358 (-)NCBIHuRef
CHM1_1537,294,516 - 37,374,012 (-)NCBICHM1_1
T2T-CHM13v2.0537,537,942 - 37,620,915 (-)NCBIT2T-CHM13v2.0
Nup155
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8258,927,171 - 58,980,162 (+)NCBIGRCr8
mRatBN7.2257,201,310 - 57,252,918 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl257,201,272 - 57,254,148 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx264,289,610 - 64,341,120 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0262,377,452 - 62,428,750 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0257,378,632 - 57,429,930 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0257,206,665 - 57,258,242 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl257,206,613 - 57,258,295 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0277,213,967 - 77,265,544 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4257,711,414 - 57,762,974 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1257,639,646 - 57,691,207 (+)NCBI
Celera252,816,019 - 52,867,498 (+)NCBICelera
Cytogenetic Map2q16NCBI
Nup155
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542621,997,208 - 22,057,205 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542621,997,208 - 22,057,205 (-)NCBIChiLan1.0ChiLan1.0
NUP155
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2472,961,586 - 73,049,173 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1571,115,210 - 71,202,806 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0573,000,597 - 73,080,417 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1578,284,523 - 78,360,762 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl578,285,001 - 78,360,601 (+)Ensemblpanpan1.1panPan2
NUP155
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1471,340,109 - 71,409,286 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl471,340,168 - 71,408,038 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha470,949,814 - 71,020,167 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0471,849,218 - 71,919,625 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl471,849,260 - 71,918,554 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1471,597,052 - 71,665,228 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0471,717,004 - 71,785,588 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0472,250,039 - 72,318,205 (+)NCBIUU_Cfam_GSD_1.0
Nup155
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213226,682,602 - 226,736,090 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365184,635,869 - 4,690,943 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365184,635,970 - 4,688,669 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NUP155
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1622,516,990 - 22,589,838 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11622,520,443 - 22,590,119 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21623,672,725 - 23,742,044 (-)NCBISscrofa10.2Sscrofa10.2susScr3
NUP155
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1436,167,078 - 36,243,040 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607126,516,374 - 26,592,704 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Nup155
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475917,682,837 - 17,761,531 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475917,682,816 - 17,760,448 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Nup155
2006 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:652
Count of miRNA genes:419
Interacting mature miRNAs:494
Transcripts:ENSMUST00000163765
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357459Nhdlq7_mnon-HDL QTL 7 (mouse)Not determined15120489829Mouse
1302121Cliff_mcliff drop aversion (mouse)Not determined15120489829Mouse
1300953Bdt5_mbone density traits 5 (mouse)Not determined15120489829Mouse
5491193Mobq4_mmultigenic obesity QTL 4 (mouse)Not determined15120489829Mouse
1301662Faq8_mfluctuating asymmetry QTL 8 (mouse)Not determined15120489829Mouse
1301023Sluc24_msusceptibility to lung cancer 24 (mouse)Not determined15120489829Mouse
4141541Tglq3_mtriglyceride QTL 3 (mouse)Not determined15120489829Mouse
11062069Bpq31_mblood pressure QTL 31 (mouse)15126273195Mouse
4141446Ffaq4_mfree fatty acid QTL 4 (mouse)Not determined127101390Mouse
1300594Eae2_msusceptibility to experimental allergic encephalomyelitis 2 (mouse)Not determined15131218736Mouse
1301136Pgia8_mproteoglycan induced arthritis 8 (mouse)Not determined15324016724388176Mouse
4141358Ath22_matherosclerosis 22 (mouse)Not determined346465237464652Mouse
10401902Sicd2_mseizure-induced cell death 2 (mouse)Not determined15347438971197538Mouse
4141952W3q7_mweight 3 weeks QTL 7 (mouse)Not determined348969478601286Mouse
4142252Tailaq4_mtail length adjusted QTL 4 (mouse)Not determined348969478601286Mouse
4142448Tailq6_mtail length QTL 6 (mouse)Not determined348969478601286Mouse
1357559Scfq2_msubcutaneous fat pad weight QTL 2 (mouse)Not determined15348969478601286Mouse
1357659Epfpq4_mepididymal fat percentage QTL 4 (mouse)Not determined15348969478601286Mouse
11252136Modvl4_mmodifier of vacuolated lens (mouse)15562049439620614Mouse
26884409Bzwq16_mbi-zygomatic width QTL 16, 16 week (mouse)15612948138000244Mouse
26884384Skwq12_mskull length QTL 12, 16 week (mouse)15612948150763396Mouse
26884387Skwq8_mskull length QTL 8, 10 week (mouse)15612948168271849Mouse
26884412Bzwq10_mbi-zygomatic width QTL 10, 10 week (mouse)15612948171471849Mouse
26884417Bzwq4_mbi-zygomatic width QTL 4, 5 week (mouse)15612948172471849Mouse
27226786Feml11_mfemur length 11, 5 week (mouse)15612948175871849Mouse
27095932Ulnl11_mulna length 11, 16 week (mouse)15612948176384200Mouse
27226717Tibw4_mtibia width 4, proximal, 10 week (mouse)15612948178684200Mouse
27226734Tibmd5_mtibia midshaft diameter 5, 10 week (mouse)15612948186684201Mouse
26884442Sklq6_mskull length QTL 6, 5 week (mouse)156129481100797881Mouse
26884429Zlq6_mzygomatic length QTL 6, 10 week (mouse)15682948144963396Mouse
27226721Tibw8_mtibia width 8, proximal, 16 week (mouse)15692948175871849Mouse
27226773Tibl16_mtibia length 16, 10 week (mouse)15692948175871849Mouse
27226777Tibl8_mtibia length 8, 5 week (mouse)15692948184584201Mouse
27095940Ulnl8_mulna length 8, 10 week (mouse)15722948155263396Mouse
27226759Feml17_mfemur length 17, 10 week (mouse)15762948155263396Mouse
27226755Feml22_mfemur length 22, 16 week (mouse)15762948159271849Mouse
27095922Pglq11_mpelvic girdle length QTL 11, 10 week (mouse)15812948438763395Mouse
26884439Sklq11_mskull length QTL 11, 10 week (mouse)15812948447663396Mouse

Markers in Region
UniSTS:237261  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38158,159,130 - 8,159,335UniSTSGRCm38
MGSCv37158,109,130 - 8,109,335UniSTSGRCm37
Celera158,003,554 - 8,003,759UniSTS
Cytogenetic Map15A2UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_133227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003951358 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC107747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF322375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK036575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK044109 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK045395 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051801 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086426 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK129217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK140214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK145717 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC050919 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466581 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO040753 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CO433695 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000163765   ⟹   ENSMUSP00000128819
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,138,757 - 8,190,731 (+)Ensembl
GRCm38.p6 Ensembl158,109,273 - 8,161,247 (+)Ensembl
RefSeq Acc Id: ENSMUST00000229039
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,172,608 - 8,174,056 (+)Ensembl
GRCm38.p6 Ensembl158,143,124 - 8,144,572 (+)Ensembl
RefSeq Acc Id: ENSMUST00000229466
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,159,582 - 8,164,418 (+)Ensembl
GRCm38.p6 Ensembl158,130,098 - 8,134,934 (+)Ensembl
RefSeq Acc Id: ENSMUST00000230017   ⟹   ENSMUSP00000155093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,138,820 - 8,186,520 (+)Ensembl
GRCm38.p6 Ensembl158,109,336 - 8,157,036 (+)Ensembl
RefSeq Acc Id: ENSMUST00000230337
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,172,530 - 8,177,056 (+)Ensembl
GRCm38.p6 Ensembl158,143,046 - 8,147,572 (+)Ensembl
RefSeq Acc Id: ENSMUST00000230647
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,182,826 - 8,185,555 (+)Ensembl
GRCm38.p6 Ensembl158,153,342 - 8,156,071 (+)Ensembl
RefSeq Acc Id: ENSMUST00000230925
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl158,180,567 - 8,188,308 (+)Ensembl
GRCm38.p6 Ensembl158,151,083 - 8,158,824 (+)Ensembl
RefSeq Acc Id: NM_133227   ⟹   NP_573490
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,138,797 - 8,189,343 (+)NCBI
GRCm38158,109,313 - 8,159,859 (+)NCBI
MGSCv37158,059,313 - 8,109,859 (+)RGD
Celera157,953,625 - 8,004,283 (+)RGD
cM Map15 ENTREZGENE
Sequence:
RefSeq Acc Id: XR_003951358
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39158,135,861 - 8,187,314 (+)NCBI
GRCm38158,109,263 - 8,157,830 (+)NCBI
Sequence:
RefSeq Acc Id: NP_573490   ⟸   NM_133227
- UniProtKB: Q99P88 (UniProtKB/Swiss-Prot),   Q80X48 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000128819   ⟸   ENSMUST00000163765
RefSeq Acc Id: ENSMUSP00000155093   ⟸   ENSMUST00000230017
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q99P88-F1-model_v2 AlphaFold Q99P88 1-1391 view protein structure

Promoters
RGD ID:6826289
Promoter ID:MM_KWN:17982
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:UC007VEI.1,   UC007VEJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36158,058,934 - 8,059,434 (+)MPROMDB
RGD ID:8683364
Promoter ID:EPDNEW_M19712
Type:initiation region
Name:Nup155_1
Description:Mus musculus nucleoporin 155 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38158,109,332 - 8,109,392EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2181182 AgrOrtholog
Ensembl Genes ENSMUSG00000022142 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000163765 ENTREZGENE
  ENSMUST00000163765.3 UniProtKB/Swiss-Prot
  ENSMUST00000230017.2 UniProtKB/TrEMBL
Gene3D-CATH 1.20.120.1880 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.20.58.1780 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.440 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  1.25.40.450 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Nucleoporin_Nup133/Nup155_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_Nup133/Nup155_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_Nup155 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_Nup155_C_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_Nup155_C_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_Nup155_C_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  WD40_repeat_dom_sf UniProtKB/TrEMBL
KEGG Report mmu:170762 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:2181182 ENTREZGENE
NCBI Gene 170762 ENTREZGENE
PANTHER NUCLEAR PORE COMPLEX PROTEIN NUP155 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10350 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Nucleoporin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleoporin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Nup155 PhenoGen
Superfamily-SCOP SSF50978 UniProtKB/TrEMBL
UniProt A0A2R8VHH1_MOUSE UniProtKB/TrEMBL
  NU155_MOUSE UniProtKB/Swiss-Prot
  Q3UL43_MOUSE UniProtKB/TrEMBL
  Q3USP6_MOUSE UniProtKB/TrEMBL
  Q6ZQ45_MOUSE UniProtKB/TrEMBL
  Q80X48 ENTREZGENE, UniProtKB/TrEMBL
  Q8BKJ0_MOUSE UniProtKB/TrEMBL
  Q8BLF5_MOUSE UniProtKB/TrEMBL
  Q8BLM6_MOUSE UniProtKB/TrEMBL
  Q8BUA6_MOUSE UniProtKB/TrEMBL
  Q99P88 ENTREZGENE