Nradd (neurotrophin receptor associated death domain)

Gene: Nradd (neurotrophin receptor associated death domain) Mus musculus

Analyze

Symbol:

Nradd

Name:

neurotrophin receptor associated death domain

RGD ID:

734424

MGI Page

MGI

Description:

Predicted to enable several functions, including coreceptor activity; nerve growth factor binding activity; and neurotrophin p75 receptor binding activity. Predicted to be involved in Rho protein signal transduction. Predicted to act upstream of or within apoptotic process. Located in lamellipodium; membrane; and nuclear envelope lumen. Is expressed in dorsal root ganglion; medulla oblongata; retina layer; and spinal cord. Orthologous to human NRADDP (neurotrophin receptor associated death domain, pseudogene).

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Previously known as:

2610311B09Rik; BB104149; death domain containing membrane protein NRADD; death domain-containing membrane protein NRADD; neurotrophin receptor homolog-2; neurotrophin receptor-alike death domain protein; NR; NRDD; NRH2; PL; PLAIDD

RGD Orthologs

Human

Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	110,450,203 - 110,453,461 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	110,450,203 - 110,453,520 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	110,621,135 - 110,624,393 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	110,621,135 - 110,624,452 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	110,523,639 - 110,526,897 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	110,465,951 - 110,469,209 (-)	NCBI		MGSCv36	mm8
Celera	9	110,351,068 - 110,354,326 (-)	NCBI		Celera
Cytogenetic Map	9	F2	NCBI
cM Map	9	60.26	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

17alpha-ethynylestradiol (EXP)

2,2',4,4'-Tetrabromodiphenyl ether (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3,7,8-Tetrachlorodibenzofuran (ISO)

6-propyl-2-thiouracil (ISO)

acrylamide (ISO)

ammonium chloride (ISO)

aristolochic acid A (ISO)

atrazine (ISO)

benzo[b]fluoranthene (EXP)

bisphenol A (ISO)

choline (EXP)

Cuprizon (ISO)

decabromodiphenyl ether (ISO)

diazinon (ISO)

dieldrin (ISO)

endosulfan (ISO)

epoxiconazole (EXP)

folic acid (EXP)

furan (ISO)

gentamycin (ISO)

inulin (EXP)

ketamine (ISO)

L-methionine (EXP)

leflunomide (ISO)

methamphetamine (EXP)

methimazole (ISO)

methotrexate (EXP)

nickel dichloride (ISO)

paracetamol (ISO)

pentanal (ISO)

perfluorooctane-1-sulfonic acid (EXP)

rotenone (EXP)

Soman (ISO)

tamoxifen (EXP)

tetrachloromethane (EXP)

trichloroethene (ISO)

trovafloxacin (EXP)

valproic acid (ISO)

vinclozolin (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

in utero embryonic development (ISO)

Rho protein signal transduction (IBA)

signal transduction (IEA)

Cellular Component

cell body membrane (ISO)

cell surface (IBA)

lamellipodium (IDA)

membrane (IDA)

neuron projection membrane (ISO)

nuclear envelope lumen (IDA)

nucleus (IDA)

plasma membrane (IBA)

Molecular Function

coreceptor activity (IBA)

death receptor activity (IBA)

nerve growth factor binding (IBA)

neurotrophin p75 receptor binding (ISO)

protein binding (IPI)

References

References - curated

#	Reference Title	Reference Citation
1.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
3.	MGDs mouse GO annotations	MGD data from the GO Consortium
4.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5.	Comparative analysis of apoptosis and inflammation genes of mice and humans.	Reed JC, etal., Genome Res 2003 Jun;13(6B):1376-88.
6.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
7.	NRADD, a novel membrane protein with a death domain involved in mediating apoptosis in response to ER stress.	Wang X, etal., Cell Death Differ 2003 May;10(5):580-91.

Additional References at PubMed

PMID:8889548	PMID:10349636	PMID:11042159	PMID:11076861	PMID:12477932	PMID:14610273	PMID:15028767	PMID:15280425	PMID:16141072	PMID:16141073	PMID:16602821	PMID:18799693
PMID:19407813	PMID:21267068	PMID:21677750	PMID:21873635	PMID:23935974	PMID:25093680	PMID:25443284	PMID:27775873

Genomics

Comparative Map Data

Nradd
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	9	110,450,203 - 110,453,461 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	9	110,450,203 - 110,453,520 (-)	Ensembl		GRCm39 Ensembl
GRCm38	9	110,621,135 - 110,624,393 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	9	110,621,135 - 110,624,452 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	9	110,523,639 - 110,526,897 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	9	110,465,951 - 110,469,209 (-)	NCBI		MGSCv36	mm8
Celera	9	110,351,068 - 110,354,326 (-)	NCBI		Celera
Cytogenetic Map	9	F2	NCBI
cM Map	9	60.26	NCBI

NRADDP
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	47,011,542 - 47,013,467 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	47,011,542 - 47,013,146 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	47,053,032 - 47,054,957 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	47,028,036 - 47,029,961 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	46,991,549 - 46,993,474 (+)	NCBI		Celera
Cytogenetic Map	3	p21.31	NCBI
HuRef	3	47,096,136 - 47,098,062 (+)	NCBI		HuRef
CHM1_1	3	47,003,417 - 47,005,342 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	47,027,905 - 47,029,830 (+)	NCBI		T2T-CHM13v2.0

Nradd
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	8	119,478,055 - 119,481,336 (-)	NCBI		GRCr8
mRatBN7.2	8	110,599,667 - 110,603,068 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	8	110,599,667 - 110,603,149 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	8	116,214,649 - 116,217,623 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	8	114,413,844 - 114,416,818 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	8	112,256,643 - 112,259,617 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	8	118,890,402 - 118,893,712 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	8	118,890,399 - 118,893,702 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	8	118,231,589 - 118,234,887 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	8	115,002,319 - 115,005,292 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	8	115,021,773 - 115,024,747 (-)	NCBI
Celera	8	109,884,040 - 109,887,013 (-)	NCBI		Celera
Cytogenetic Map	8	q32	NCBI

Variants

Variants in Nradd
133 total Variants

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	206
Count of miRNA genes:	181
Interacting mature miRNAs:	193
Transcripts:	ENSMUST00000035069
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4141833	W10q13_m	weight 10 weeks QTL 13 (mouse)			Not determined			63239711	120191934	Mouse
4141545	Tailaq2_m	tail length adjusted QTL 2 (mouse)			Not determined			63239711	120191934	Mouse
1357635	Splq4_m	spleen weight QTL 4 (mouse)			Not determined		9	63239711	120191934	Mouse
1302065	El1_m	epilepsy 1 (mouse)			Not determined		9	75682646	114303447	Mouse
10054492	El7_m	epilepsy 7 (mouse)			Not determined		9	75682646	114303447	Mouse
1301192	Skts6_m	skin tumor susceptibility 6 (mouse)			Not determined		9	78522698	112522808	Mouse
10401247	Bglu14_m	blood glucose level 14 (mouse)			Not determined		9	79279863	113279941	Mouse
1301732	Char1_m	P. chabaudi malaria resistance QTL 1 (mouse)			Not determined		9	81680321	115680445	Mouse
10766454	Char10_m	P. chabaudi malaria resistance QTL 10 (mouse)					9	82792386	116792481	Mouse
1300884	Sluc11_m	susceptibility to lung cancer 11 (mouse)			Not determined		9	82792386	116792481	Mouse
1357461	Idd2_m	insulin dependent diabetes susceptibility 2 (mouse)			Not determined		9	82792386	116792481	Mouse
1301487	Nociq1_m	nociceptive sensitivity inflammatory QTL 1 (mouse)			Not determined		9	84406017	118406120	Mouse
1300549	Bbaa17_m	B. burgdorferi-associated arthritis 17 (mouse)			Not determined		9	86107600	120107729	Mouse
1302103	Dob2_m	dietary obesity 2 (mouse)			Not determined		9	86121898	120118690	Mouse
11251716	Siim2_m	stress induced immobility 2 (mouse)					9	86625682	120625682	Mouse
12880422	V25Dq6_m	vitamin D inactive form serum level QTL 6 (mouse)					9	87677199	121677199	Mouse
10412242	Alpq8_m	alcohol preference QTL 8 (mouse)			Not determined		9	89162124	123162124	Mouse
1301649	Psl1_m	promotion susceptibility QTL 1 (mouse)			Not determined		9	89289476	123289595	Mouse
18182932	Metl3_m	metabolite locus 3, N-acetylglutamate (mouse)					9	89440541	123440541	Mouse
1357657	Pymr_m	Plasmodium yoelli malaria resistance (mouse)			Not determined		9	89859058	118767089	Mouse
12910770	Splic1_m	spleen iron content 1 (mouse)					9	91291078	124359700	Mouse
12910772	Lvic6_m	liver iron content 6 (mouse)					9	91291078	124359700	Mouse
12910773	Splic3_m	spleen iron content 3 (mouse)					9	91291078	124359700	Mouse
1558767	Skmw11_m	skeletal muscle weight 11 (mouse)			Not determined		9	91518283	124359700	Mouse
13463474	Hbbcq5_m	hemoglobin concentration QTL 5 (mouse)					9	91518283	124359700	Mouse
13463475	Hctq7_m	hematocrit QTL 7 (mouse)					9	91518283	124359700	Mouse
13463477	Rbc9_m	red blood cell count 9 (mouse)					9	91518283	124359700	Mouse
13463478	Mchq18_m	mean corpuscular hemoglobin QTL 18 (mouse)					9	91518283	124359700	Mouse
13463480	Mchcq2_m	mean corpuscular hemoglobin concentration QTL 2 (mouse)					9	91518283	124359700	Mouse
12904937	Edlmmq9_m	extensor digitorum longus muscle mass QTL 9 (mouse)					9	91560372	124359700	Mouse
12904947	Tammq7_m	tibialis anterior muscle mass QTL 7 (mouse)					9	91560372	124359700	Mouse
12904961	Gmmq7_m	gastrocnemius muscle mass QTL 7 (mouse)					9	91560372	124359700	Mouse
1301484	Bwq6_m	body weight (mouse)			Not determined		9	93591658	124359700	Mouse
1302001	Bdln5_m	body length 5 (mouse)			Not determined		9	93591658	124359700	Mouse
14746992	Manh67_m	mandible shape 67 (mouse)					9	93865836	124359700	Mouse
11081166	Psl5_m	promotion susceptibility QTL 5 (mouse)					9	94863354	112701997	Mouse
11537364	Cnes5_m	C. neoformans susceptibility locus 5 (mouse)					9	96746658	124359700	Mouse
1301297	Lcho1_m	liver cholesterol 1 (mouse)			Not determined		9	100889929	124359700	Mouse
1357648	Obq18_m	obesity QTL 18 (mouse)			Not determined		9	101829255	124359700	Mouse
1357627	Tgq2_m	triglyceride QTL 2 (mouse)			Not determined		9	101829255	124359700	Mouse
10412290	Pvacm1l_m	plasma vascular cell adhesion molecule 1 levels (mouse)			Not determined		9	103118511	124359700	Mouse
12879896	Berr3_m	berghei resistance locus 3 (mouse)					9	103118511	124359700	Mouse
1301789	Pbwg4_m	postnatal body weight growth 4 (mouse)			Not determined		9	103118511	124359700	Mouse
13515058	Adip20d_m	adiposity 20d (mouse)					9	108744078	118744078	Mouse

Markers in Region

BB104149

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	9	110,621,139 - 110,621,258	UniSTS	GRCm38
MGSCv37	9	110,523,643 - 110,523,762	UniSTS	GRCm37
Celera	9	110,351,072 - 110,351,191	UniSTS
Cytogenetic Map	9	F2	UniSTS
Whitehead/MRC_RH	9	1129.04	UniSTS

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_026012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AC132103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AF534394	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK007483	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK160222	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AX431312	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC039808	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC069856	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466621	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CS483648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSMUST00000035069 ⟹ ENSMUSP00000035069

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	110,450,203 - 110,453,520 (-)	Ensembl
GRCm38.p6 Ensembl	9	110,621,135 - 110,624,452 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000196735 ⟹ ENSMUSP00000143785

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	110,450,576 - 110,452,390 (-)	Ensembl
GRCm38.p6 Ensembl	9	110,621,508 - 110,623,322 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000196876 ⟹ ENSMUSP00000142925

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	110,450,953 - 110,453,446 (-)	Ensembl
GRCm38.p6 Ensembl	9	110,621,885 - 110,624,378 (-)	Ensembl

RefSeq Acc Id:

ENSMUST00000197894

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	9	110,451,648 - 110,453,499 (-)	Ensembl
GRCm38.p6 Ensembl	9	110,622,580 - 110,624,431 (-)	Ensembl

RefSeq Acc Id:

NM_026012 ⟹ NP_080288

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	9	110,450,203 - 110,453,461 (-)	NCBI
GRCm38	9	110,621,135 - 110,624,393 (-)	NCBI
MGSCv37	9	110,523,639 - 110,526,897 (-)	RGD
Celera	9	110,351,068 - 110,354,326 (-)	RGD
cM Map	9		ENTREZGENE

Sequence:

show sequence

GAACCTGCCCTCTCCAGGGACTCCCGTCGTCTTCCTAGCTGAGTGGATCCTGGCACCCTCGGAG
GGGTGGCCGCAGAAGAGTTCCTCCTTCTGAGATTCAAGAGAAGCAGGCTCCAAGCTCCGTCAAC
TCAGTTCTCTACACAACTCCCCTTCACCAAAAAACAGCCCAGCAGGCAGCGCCTGGCAGCACCA
TGCTTTATAACGTCAGCAAAGGTGTGGTCTATTCAGATACAGCCCTGCAGGGGCAGGACGGGGA
CAGGGAAGGAATGTGGGTAGGAGCTGGGGGAGCCCTAGCCCCCAATACCTCCTCCCTATTTCCC
CCTGAGCCTCCAGGGGCCTCGAGCAACATCATTCCTGTCTACTGTGCTCTCCTAGCTACAGTGA
TCCTTGGTCTGCTGGCCTATGTGGCCTTCAAATGCTGGCGCTCACATAAGCAAAGGCAACAGTT
GGCTAAAGCTCGGACTGTAGAGCTAGGGGACCCTGACAGGGACCAGAGGCGTGGTGACAGCAAC
GTCTTCGTGGACTCTCCTCCTAGTCTGGAGCCCTGTATTCCCAGCCAGGGACCACACCCGGACC
TTGGCTGCCAGCTTTACCTGCATATTCCACAGCAGCAGCAGGAGGAAGTCCAGCGGCTCCTGAT
GATGGGTGAGCCAGCCAAGGGCTGGCAGGAGCTGGCAGGCCACCTCGGCTACCAAGCTGAGGCT
GTGGAAACCATGGCCTGTGACCAAATGCCAGCCTATACCCTGCTAAGGAACTGGGCTGCCCAAG
AAGGCAATAGAGCTACCCTCAGAGTGCTGGAGGATGCTCTGGCTGCCATAGGCCGAGAAGATGT
GGTCCAGGTTTTGAGCTCGCCAGCTGAGAGCTCCTCGGTGGTGTGAGTGCCGCCTCCCAGGGCT
GCCTGCCCTGGCCTCATGTCTTTCATGGGCTTCCTAGTACTTCTCTGGCTTCAGCTTGCTGTTG
TGGCAGCAGAACACAAAAGATCCGGCCACTTCATGTTCCTTCTCCATCCTCTCCAAGATAGAAG
CGAGGGACATGGGGGGGTGGGTAAGAGAGTGGGCATGGCTTTGCCCACAGATTCTCGTTCTGCC
CCTTTATGTGCTTGTTATTTTTTCTATTTCTTTTTAAGAATCACATATTAAAGGCACCTTTGGA
GTTTTGTTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

hide sequence

Protein Sequences


Protein RefSeqs	NP_080288	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH39808	(Get FASTA)	NCBI Sequence Viewer
	AAH69856	(Get FASTA)	NCBI Sequence Viewer
	AAN05631	(Get FASTA)	NCBI Sequence Viewer
	BAB25059	(Get FASTA)	NCBI Sequence Viewer
	BAE35698	(Get FASTA)	NCBI Sequence Viewer
	CAD37282	(Get FASTA)	NCBI Sequence Viewer
	CAM36372	(Get FASTA)	NCBI Sequence Viewer
	EDL09010	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSMUSP00000035069
	ENSMUSP00000035069.10
	ENSMUSP00000142925.2
	ENSMUSP00000143785.2
GenBank Protein	Q8CJ26	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

NP_080288 ⟸ NM_026012

- UniProtKB:

Q3TVC1 (UniProtKB/Swiss-Prot), Q8CJ26 (UniProtKB/Swiss-Prot), A0A0G2JH13 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MLYNVSKGVVYSDTALQGQDGDREGMWVGAGGALAPNTSSLFPPEPPGASSNIIPVYCALLATV
ILGLLAYVAFKCWRSHKQRQQLAKARTVELGDPDRDQRRGDSNVFVDSPPSLEPCIPSQGPHPD
LGCQLYLHIPQQQQEEVQRLLMMGEPAKGWQELAGHLGYQAEAVETMACDQMPAYTLLRNWAAQ
EGNRATLRVLEDALAAIGREDVVQVLSSPAESSSVV

hide sequence

RefSeq Acc Id:

ENSMUSP00000035069 ⟸ ENSMUST00000035069

RefSeq Acc Id:

ENSMUSP00000142925 ⟸ ENSMUST00000196876

RefSeq Acc Id:

ENSMUSP00000143785 ⟸ ENSMUST00000196735

Protein Domains

Death Tumor necrosis factor receptor member

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q8CJ26-F1-model_v2	AlphaFold	Q8CJ26	1-228	view protein structure

Promoters

RGD ID:

6844883

Promoter ID:

MM_KWN:58920

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, 3T3L1_Day4, 3T3L1_Day6, BoneMarrow_0Hour, BoneMarrow_2Hour, BoneMarrow_4Hour, Brain, ES_Cell, Kidney, Liver, Lung, MEF_B4, MEF_B6, Spleen

Transcripts:

NM_026012

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	9	110,526,781 - 110,527,687 (-)	MPROMDB

RGD ID:

8671008

Promoter ID:

EPDNEW_M13535

Type:

initiation region

Name:

Nradd_1

Description:

Mus musculus neurotrophin receptor associated death domain ,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	9	110,624,399 - 110,624,459	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:1914419	AgrOrtholog
Ensembl Genes	ENSMUSG00000032491	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000035069	ENTREZGENE
	ENSMUST00000035069.14	UniProtKB/Swiss-Prot
	ENSMUST00000196735.2	UniProtKB/TrEMBL
	ENSMUST00000196876.2	UniProtKB/TrEMBL
Gene3D-CATH	1.10.533.10	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	6.10.250.1780	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro	DEATH-like_dom_sf	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Death_domain	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TNFR16_TM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:67169	UniProtKB/Swiss-Prot
MGD	MGI:1914419	ENTREZGENE
NCBI Gene	67169	ENTREZGENE
PANTHER	DEATH DOMAIN-CONTAINING MEMBRANE PROTEIN NRADD	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TUMOR NECROSIS FACTOR RECEPTOR	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Death	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	TNFR_16_TM	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Nradd	PhenoGen
PROSITE	DEATH_DOMAIN	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	DEATH	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF47986	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A0G2JEW0_MOUSE	UniProtKB/TrEMBL
	A0A0G2JH13	ENTREZGENE, UniProtKB/TrEMBL
	NRADD_MOUSE	UniProtKB/Swiss-Prot
	Q3TVC1	ENTREZGENE
	Q8CHQ4_MOUSE	UniProtKB/TrEMBL
	Q8CJ26	ENTREZGENE
	Q9CVM2_MOUSE	UniProtKB/TrEMBL
UniProt Secondary	Q3TVC1	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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