Pbld1 (phenazine biosynthesis-like protein domain containing 1) - Rat Genome Database

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Gene: Pbld1 (phenazine biosynthesis-like protein domain containing 1) Mus musculus
Analyze
Symbol: Pbld1
Name: phenazine biosynthesis-like protein domain containing 1
RGD ID: 734354
MGI Page MGI
Description: Predicted to enable identical protein binding activity and isomerase activity. Predicted to be involved in maintenance of gastrointestinal epithelium. Predicted to act upstream of or within with a positive effect on negative regulation of transforming growth factor beta receptor signaling pathway. Predicted to be active in cytoplasm. Is expressed in eye; heart; liver; metanephros; and retina. Orthologous to human PBLD (phenazine biosynthesis like protein domain containing).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 0610038K03Rik; Mawbp; MAWD binding protein homolog 1; Pb; Pbld; phenazine biosynthesis-like domain-containing protein 1
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391062,896,404 - 62,913,743 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1062,895,941 - 62,913,741 (+)EnsemblGRCm39 Ensembl
GRCm381063,060,625 - 63,077,964 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1063,060,162 - 63,077,962 (+)EnsemblGRCm38mm10GRCm38
MGSCv371062,524,365 - 62,540,293 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361062,456,974 - 62,472,902 (+)NCBIMGSCv36mm8
Celera1064,163,141 - 64,178,081 (+)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.53NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
3-chloropropane-1,2-diol  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (EXP)
ammonium chloride  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buspirone  (ISO)
carbon nanotube  (EXP)
chlorohydrocarbon  (ISO)
chlorpyrifos  (EXP)
cisplatin  (ISO)
clothianidin  (ISO)
copper(II) sulfate  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (EXP)
decabromodiphenyl ether  (ISO)
dibenzofurans  (EXP)
dicrotophos  (ISO)
diethyl maleate  (ISO)
dorsomorphin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
ethyl methanesulfonate  (ISO)
finasteride  (ISO)
flutamide  (ISO)
folic acid  (ISO)
formaldehyde  (ISO)
genistein  (EXP)
glafenine  (ISO)
glucose  (EXP)
glycidol  (ISO)
hydrogen peroxide  (ISO)
lead diacetate  (EXP,ISO)
leflunomide  (ISO)
levofloxacin  (ISO)
manganese(II) chloride  (ISO)
methapyrilene  (ISO)
methyl methanesulfonate  (ISO)
methylmercury chloride  (ISO)
Muraglitazar  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nefazodone  (ISO)
nickel dichloride  (ISO)
nimesulide  (ISO)
nitrofen  (ISO)
O-methyleugenol  (ISO)
paracetamol  (EXP,ISO)
perfluorododecanoic acid  (ISO)
perfluorohexanesulfonic acid  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
potassium dichromate  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP,ISO)
sodium arsenite  (EXP,ISO)
sotorasib  (ISO)
sunitinib  (ISO)
tamoxifen  (EXP)
Tesaglitazar  (ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
trametinib  (ISO)
tremolite asbestos  (EXP)
trichloroethene  (ISO)
triptonide  (EXP)
troglitazone  (EXP,ISO)
trovafloxacin  (ISO)
urethane  (ISO)
valproic acid  (EXP,ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IBA,ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. Database resources of the National Center for Biotechnology Information. Wheeler DL, etal., Nucleic Acids Res 2001 Jan 1;29(1):11-6.
Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:15489334   PMID:16141072   PMID:16141073   PMID:21267068   PMID:21441919   PMID:21873635   PMID:28402856   PMID:32325033  


Genomics

Comparative Map Data
Pbld1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391062,896,404 - 62,913,743 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1062,895,941 - 62,913,741 (+)EnsemblGRCm39 Ensembl
GRCm381063,060,625 - 63,077,964 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1063,060,162 - 63,077,962 (+)EnsemblGRCm38mm10GRCm38
MGSCv371062,524,365 - 62,540,293 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361062,456,974 - 62,472,902 (+)NCBIMGSCv36mm8
Celera1064,163,141 - 64,178,081 (+)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1032.53NCBI
PBLD
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381068,282,660 - 68,332,928 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1068,282,660 - 68,333,049 (-)EnsemblGRCh38hg38GRCh38
GRCh371070,042,417 - 70,092,685 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361069,712,423 - 69,762,690 (-)NCBINCBI36Build 36hg18NCBI36
Celera1063,317,016 - 63,367,286 (-)NCBICelera
Cytogenetic Map10q21.3ENTREZGENE
HuRef1064,042,459 - 64,092,943 (-)NCBIHuRef
CHM1_11070,324,186 - 70,374,475 (-)NCBICHM1_1
T2T-CHM13v2.01069,151,835 - 69,202,137 (-)NCBIT2T-CHM13v2.0
Pbld1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82025,549,974 - 25,565,390 (-)NCBIGRCr8
mRatBN7.22025,551,274 - 25,566,543 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2025,551,275 - 25,565,614 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2026,244,784 - 26,292,585 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02025,597,808 - 25,645,613 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02026,183,814 - 26,198,121 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02027,103,300 - 27,118,650 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2027,103,317 - 27,117,663 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02028,943,838 - 28,959,154 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42025,413,994 - 25,428,299 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12025,427,793 - 25,442,098 (+)NCBI
Celera2026,847,142 - 26,861,446 (-)NCBICelera
Cytogenetic Map20p11NCBI
Pbld
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542520,584,644 - 20,620,988 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542520,564,296 - 20,620,988 (-)NCBIChiLan1.0ChiLan1.0
PBLD
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2880,445,950 - 80,496,127 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11080,451,269 - 80,501,442 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01064,766,873 - 64,817,055 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11067,077,445 - 67,126,980 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1067,077,445 - 67,126,980 (-)Ensemblpanpan1.1panPan2
PBLD
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1419,514,256 - 19,558,515 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl419,515,050 - 19,558,335 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha419,646,585 - 19,690,978 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0419,784,051 - 19,828,752 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl419,784,177 - 19,828,491 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1419,666,513 - 19,710,931 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0419,888,619 - 19,933,076 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0420,231,931 - 20,276,333 (-)NCBIUU_Cfam_GSD_1.0
Pbld
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721361,450,336 - 61,505,700 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365219,984,783 - 9,998,858 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365219,943,061 - 9,998,421 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PBLD
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1471,440,778 - 71,487,480 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11471,442,850 - 71,487,542 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21477,502,975 - 77,528,863 (-)NCBISscrofa10.2Sscrofa10.2susScr3
PBLD
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1963,061,291 - 63,108,098 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl963,084,627 - 63,106,874 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604823,829,877 - 23,876,174 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Pbld
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247542,640,884 - 2,663,990 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247542,525,486 - 2,697,705 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Pbld1
749 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:896
Count of miRNA genes:375
Interacting mature miRNAs:418
Transcripts:ENSMUST00000020266, ENSMUST00000178684
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021408154114217230Mouse
10045632Heal16_mwound healing/regeneration 16 (mouse)Not determined103097449964974630Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined104984818783848412Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined104984822283848397Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101270405184079784Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024675898121035905Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059335822122335905Mouse
27095920Pglq9_mpelvic girdle length QTL 9, 10 week (mouse)103377599670835830Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039175996129635869Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101270405184079784Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039175996129635869Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045476096120635905Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined104984822283848397Mouse
26884421Cvht5_mcranial vault height 5, 10 week (mouse)104557609669135830Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1270405184079784Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102287589991035862Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104933801283338157Mouse
1357558Bmch4_mbone mechanical trait 4 (mouse)Not determined103157713665577284Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1270405184079784Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018259333125575232Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1044876096115935905Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined104984818783848412Mouse
1357740Obsty3_mobesity 3 (mouse)Not determined108235478116190980Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1270405184079784Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105109149085091639Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101270405184079784Mouse
1301003Lmblgq4_mlimb length QTL 4 (mouse)Not determined102159119268091639Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101010826587401095Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101270405184079784Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1270405184079784Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1018875748129635869Mouse
26884400Huml5_mhumerus length 5, 16 week (mouse)104627609669235830Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined104984818783848412Mouse
14746991Manh68_mmandible shape 68 (mouse)105228049786280497Mouse
38455999Lick3_mlick rate 3 (mouse)106187303169373082Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4672040382491121Mouse
1300898Cfid_mcystic fibrosis intestinal distress (mouse)Not determined102972040363720483Mouse
4141070Ltgq1_mliver triglyceride QTL 1 (mouse)Not determined4123732675237326Mouse
4141159Phl2_mprogressive hearing loss 2 (mouse)Not determined104797449970112651Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105109149085091639Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105149340082491121Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105851696992517096Mouse
13208560Wght9_mweight 9 (mouse)1059835822120835905Mouse

Markers in Region
D9Mit34.1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map13D1UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map2C1.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map9F1UniSTS
Cytogenetic Map1FUniSTS
Cytogenetic Map7D3UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map3F2UniSTS
Cytogenetic Map14C3UniSTS
Cytogenetic Map9A3UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map11B4UniSTS
Cytogenetic Map5G3UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map6F2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map16B1UniSTS
Cytogenetic Map12C1UniSTS
Cytogenetic Map7E2UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map15E1UniSTS
Cytogenetic Map3G2UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map1E4UniSTS
Cytogenetic Map1E3UniSTS
Cytogenetic Map5E1UniSTS
Cytogenetic Map7F3UniSTS
Cytogenetic Map16B3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map19D3UniSTS
Cytogenetic Map1H5UniSTS
Cytogenetic Map1DUniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map8A2UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map2BUniSTS
Cytogenetic Map5A3UniSTS
Cytogenetic Map9DUniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map19C3UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map4C6UniSTS
Cytogenetic Map17DUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map13A1UniSTS
Cytogenetic Map3F2.1UniSTS
Cytogenetic Map15D3UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map12A3UniSTS
Cytogenetic Map1H2.1UniSTS
Cytogenetic Map7F5UniSTS
Cytogenetic Map7CUniSTS
Cytogenetic Map2E1UniSTS
Cytogenetic Map11B2UniSTS
Cytogenetic Map16A3UniSTS
Cytogenetic Map5C3.3UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map5G1UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map7B1UniSTS
Cytogenetic Map3F2.2UniSTS
Cytogenetic Map5C3.1UniSTS
Cytogenetic Map2C3UniSTS
Cytogenetic Map17A3.2-A3.3UniSTS
Cytogenetic Map6E3UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map2C2UniSTS
Cytogenetic Map19CUniSTS
Cytogenetic Map17E1.3UniSTS
Cytogenetic Map5A1UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map1A1UniSTS
Cytogenetic Map13A5UniSTS
Cytogenetic MapXA1.1UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map3A3UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map8CUniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map10C2UniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map2H3UniSTS
Cytogenetic Map2A1UniSTS
Cytogenetic Map1H1UniSTS
Cytogenetic Map15F3UniSTS
Cytogenetic Map9E1UniSTS
Cytogenetic Map9CUniSTS
Cytogenetic Map1A2UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map19AUniSTS
Cytogenetic Map5B2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map11B1.3UniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map5G1.3UniSTS
Cytogenetic Map7D1-E2UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map1H2.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map11DUniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map15F2UniSTS
Cytogenetic Map9A2UniSTS
Cytogenetic Map1H4-H6UniSTS
Cytogenetic Map12D2UniSTS
Cytogenetic Map1G3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map1H3UniSTS
Cytogenetic Map19BUniSTS
cM Map950.0UniSTS
Whitehead Genetic943.7UniSTS
D11Bhm20  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map7F1UniSTS
Cytogenetic Map5E2UniSTS
Cytogenetic Map1C3UniSTS
Cytogenetic Map17A3.3UniSTS
Cytogenetic Map19D1UniSTS
Cytogenetic Map13A2-A3UniSTS
Cytogenetic Map11A1UniSTS
Cytogenetic Map5C1UniSTS
Cytogenetic Map12D1UniSTS
Cytogenetic Map8E1UniSTS
Cytogenetic Map4D1UniSTS
Cytogenetic Map7B4UniSTS
Cytogenetic Map3F1UniSTS
Cytogenetic Map7A1UniSTS
Cytogenetic Map4E1UniSTS
Cytogenetic Map10B4UniSTS
Cytogenetic Map2E5UniSTS
Cytogenetic Map14BUniSTS
Cytogenetic Map10C1UniSTS
Cytogenetic Map19C2UniSTS
Cytogenetic Map7A3UniSTS
Cytogenetic Map16C1.1UniSTS
Cytogenetic Map3BUniSTS
Cytogenetic Map13B3UniSTS
Cytogenetic Map15F1UniSTS
Cytogenetic Map5B1UniSTS
Cytogenetic Map2E2UniSTS
Cytogenetic Map8B3.3UniSTS
Cytogenetic Map6F3UniSTS
Cytogenetic Map4C7UniSTS
Cytogenetic Map12F1UniSTS
Cytogenetic Map10A3UniSTS
Cytogenetic Map14D2UniSTS
Cytogenetic Map6A3.3UniSTS
Cytogenetic Map6G3UniSTS
Cytogenetic Map9F2UniSTS
Cytogenetic Map11E2UniSTS
Cytogenetic Map1C1.3UniSTS
Cytogenetic Map13D2UniSTS
Cytogenetic Map11CUniSTS
Cytogenetic Map17B1UniSTS
Cytogenetic Map18B3UniSTS
Cytogenetic Map4E2UniSTS
Cytogenetic MapXA5UniSTS
Cytogenetic Map6A2UniSTS
Cytogenetic Map2H4UniSTS
Cytogenetic Map5FUniSTS
Cytogenetic Map11E1UniSTS
Cytogenetic Map16C4UniSTS
Cytogenetic Map3G1UniSTS
Cytogenetic Map8D2UniSTS
Cytogenetic Map2H2UniSTS
Cytogenetic Map11B5UniSTS
Cytogenetic Map4D3UniSTS
Cytogenetic Map12C3UniSTS
Cytogenetic Map7B1-B2UniSTS
Cytogenetic Map4D2.2UniSTS
Cytogenetic Map11B1.1UniSTS
Cytogenetic Map15B3.1UniSTS
Cytogenetic Map8D3UniSTS
Cytogenetic Map10D2UniSTS
Cytogenetic Map15E3UniSTS
Cytogenetic Map2H1UniSTS
Cytogenetic Map7E3UniSTS
Cytogenetic Map4D2.3UniSTS
Cytogenetic Map10D3UniSTS
Cytogenetic Map12EUniSTS
Cytogenetic Map5G2UniSTS
Cytogenetic Map1H6UniSTS
Cytogenetic Map16A1UniSTS
Cytogenetic Map2A3UniSTS
Cytogenetic Map9A5.2UniSTS
Cytogenetic Map3DUniSTS
Cytogenetic Map6B1UniSTS
Cytogenetic MapXC-DUniSTS
Cytogenetic Map13B1UniSTS
Cytogenetic Map11A3.2UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic MapXA7.3UniSTS
Cytogenetic Map12A1.1UniSTS
Cytogenetic Map16B4UniSTS
Cytogenetic Map4B3UniSTS
Cytogenetic Map5E5UniSTS
Cytogenetic Map19BUniSTS
cM Map1144.15UniSTS
Pbld1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map10B4UniSTS
cM Map1032.53UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359529 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_153192 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_153193 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514029 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006514031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC113107 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK143947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019997 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC028493 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC038517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC052783 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE628967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000020266   ⟹   ENSMUSP00000020266
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,897,361 - 62,913,741 (+)Ensembl
GRCm38.p6 Ensembl1063,061,582 - 63,077,962 (+)Ensembl
RefSeq Acc Id: ENSMUST00000178684   ⟹   ENSMUSP00000136589
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,897,361 - 62,913,741 (+)Ensembl
GRCm38.p6 Ensembl1063,061,582 - 63,077,962 (+)Ensembl
RefSeq Acc Id: ENSMUST00000218401
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,899,583 - 62,899,907 (+)Ensembl
GRCm38.p6 Ensembl1063,063,804 - 63,064,128 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219045   ⟹   ENSMUSP00000151357
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,896,508 - 62,899,907 (+)Ensembl
GRCm38.p6 Ensembl1063,060,729 - 63,064,128 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219204
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,895,941 - 62,896,594 (+)Ensembl
GRCm38.p6 Ensembl1063,060,162 - 63,060,815 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219687   ⟹   ENSMUSP00000151373
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,896,492 - 62,899,907 (+)Ensembl
GRCm38.p6 Ensembl1063,060,713 - 63,064,128 (+)Ensembl
RefSeq Acc Id: ENSMUST00000219829   ⟹   ENSMUSP00000151721
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1062,903,245 - 62,908,203 (+)Ensembl
GRCm38.p6 Ensembl1063,067,466 - 63,072,424 (+)Ensembl
RefSeq Acc Id: NM_001359529   ⟹   NP_001346458
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,492 - 62,913,739 (+)NCBI
GRCm381063,060,713 - 63,077,960 (+)NCBI
Sequence:
RefSeq Acc Id: NM_026701   ⟹   NP_080977
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,897,368 - 62,913,739 (+)NCBI
GRCm381063,061,589 - 63,077,960 (+)NCBI
MGSCv371062,524,365 - 62,540,293 (+)RGD
Celera1064,163,141 - 64,178,081 (+)RGD
cM Map10 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_153192
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,492 - 62,899,905 (+)NCBI
GRCm381063,060,713 - 63,064,126 (+)NCBI
Sequence:
RefSeq Acc Id: NR_153193
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,492 - 62,899,905 (+)NCBI
GRCm381063,060,713 - 63,064,126 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006514029   ⟹   XP_006514092
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,408 - 62,913,743 (+)NCBI
GRCm381063,060,629 - 63,077,964 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006514030   ⟹   XP_006514093
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,404 - 62,913,743 (+)NCBI
GRCm381063,060,625 - 63,077,964 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006514031   ⟹   XP_006514094
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391062,896,492 - 62,913,743 (+)NCBI
GRCm381063,060,713 - 63,077,964 (+)NCBI
Sequence:
RefSeq Acc Id: NP_080977   ⟸   NM_026701
- Peptide Label: isoform 1
- UniProtKB: Q8VCF3 (UniProtKB/Swiss-Prot),   Q9DCG6 (UniProtKB/Swiss-Prot),   K3W4L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514093   ⟸   XM_006514030
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006514092   ⟸   XM_006514029
- Peptide Label: isoform X1
- UniProtKB: K3W4L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514094   ⟸   XM_006514031
- Peptide Label: isoform X3
- UniProtKB: K3W4L7 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001346458   ⟸   NM_001359529
- Peptide Label: isoform 1
- UniProtKB: Q9DCG6 (UniProtKB/Swiss-Prot),   Q8VCF3 (UniProtKB/Swiss-Prot),   K3W4L7 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000136589   ⟸   ENSMUST00000178684
RefSeq Acc Id: ENSMUSP00000020266   ⟸   ENSMUST00000020266
RefSeq Acc Id: ENSMUSP00000151357   ⟸   ENSMUST00000219045
RefSeq Acc Id: ENSMUSP00000151373   ⟸   ENSMUST00000219687
RefSeq Acc Id: ENSMUSP00000151721   ⟸   ENSMUST00000219829

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9DCG6-F1-model_v2 AlphaFold Q9DCG6 1-288 view protein structure

Promoters
RGD ID:6819705
Promoter ID:MM_KWN:4361
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:UC007FJS.1,   UC007FJT.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361062,522,831 - 62,523,331 (+)MPROMDB
RGD ID:6819708
Promoter ID:MM_KWN:4362
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Kidney,   Liver
Transcripts:UC007FJU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361062,523,456 - 62,524,407 (+)MPROMDB
RGD ID:8672166
Promoter ID:EPDNEW_M14113
Type:initiation region
Name:Pbld1_1
Description:Mus musculus phenazine biosynthesis-like protein domain containing1 , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381063,061,595 - 63,061,655EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915621 AgrOrtholog
Ensembl Genes ENSMUSG00000112129 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020266.15 UniProtKB/TrEMBL
  ENSMUST00000178684 ENTREZGENE
  ENSMUST00000178684.3 UniProtKB/Swiss-Prot
  ENSMUST00000219045 ENTREZGENE
  ENSMUST00000219045.2 UniProtKB/TrEMBL
  ENSMUST00000219687 ENTREZGENE
  ENSMUST00000219687.2 UniProtKB/TrEMBL
  ENSMUST00000219829.2 UniProtKB/TrEMBL
InterPro Phenazine_PhzF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:68371 UniProtKB/Swiss-Prot
MGD MGI:1915621 ENTREZGENE
NCBI Gene 68371 ENTREZGENE
PANTHER PHENAZINE BIOSYNTHESIS-LIKE DOMAIN-CONTAINING PROTEIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR13774 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PhzC-PhzF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Pbld1 PhenoGen
PIRSF PhzC_PhzF UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Diaminopimelate epimerase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A1W2P6P6_MOUSE UniProtKB/TrEMBL
  A0A1W2P6V3_MOUSE UniProtKB/TrEMBL
  A0A1W2P7N2_MOUSE UniProtKB/TrEMBL
  K3W4L7 ENTREZGENE, UniProtKB/TrEMBL
  PBLD1_MOUSE UniProtKB/Swiss-Prot
  Q8VCF3 ENTREZGENE
  Q9DCG6 ENTREZGENE
UniProt Secondary Q8VCF3 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-07-27 Pbld1  phenazine biosynthesis-like protein domain containing 1  Pbld  phenazine biosynthesis-like protein domain containing  Symbol and/or name change 5135510 APPROVED