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Gene: CAPN6 (calpain 6) Homo sapiens
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Symbol: CAPN6
Name: calpain 6
Description: Predicted to have calcium-dependent cysteine-type endopeptidase activity and microtubule binding activity. Predicted to be involved in microtubule bundle formation and regulation of cytoskeleton organization. Localizes to the perinuclear region of cytoplasm and spindle microtubule.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: calpain-6; calpain-like protease X-linked; calpamodulin; CalpM; CANPX; CAPNX; DJ914P14.1
Orthologs:
Mus musculus (house mouse) : Capn6 (calpain 6)  MGI  Alliance
Rattus norvegicus (Norway rat) : Capn6 (calpain 6)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Capn6 (calpain 6)
Pan paniscus (bonobo/pygmy chimpanzee) : CAPN6 (calpain 6)
Canis lupus familiaris (dog) : CAPN6 (calpain 6)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Capn6 (calpain 6)
Sus scrofa (pig) : CAPN6 (calpain 6)
Chlorocebus sabaeus (green monkey) : CAPN6 (calpain 6)
Heterocephalus glaber (naked mole-rat) : Capn6 (calpain 6)
more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38 EnsemblX111,245,099 - 111,270,483 (-)Ensembl
GRCh38X111,245,099 - 111,270,483 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X110,488,327 - 110,513,774 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X110,374,987 - 110,400,407 (-)NCBINCBI36hg18NCBI36
Build 34X110,294,475 - 110,319,896NCBI
CeleraX110,967,943 - 110,993,390 (-)NCBI
Cytogenetic MapXq23NCBI
HuRefX100,110,837 - 100,136,321 (-)NCBIHuRef
CHM1_1X110,399,827 - 110,425,289 (-)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
miRNA Target Status

Expression

RNA-SEQ Expression

Sequence

Nucleotide Sequences
Protein Sequences
Promoters
Clinical Variants

Additional Information

External Database Links
 
More on CAPN6
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: hg19 hg38
HGNC Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 734276
Created: 2004-01-12
Species: Homo sapiens
Last Modified: 2019-12-25
Status: ACTIVE



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RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.