FMO3 (flavin containing dimethylaniline monoxygenase 3) - Rat Genome Database

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Gene: FMO3 (flavin containing dimethylaniline monoxygenase 3) Homo sapiens
Analyze
Symbol: FMO3
Name: flavin containing dimethylaniline monoxygenase 3
RGD ID: 734270
HGNC Page HGNC:3771
Description: Enables hypotaurine dehydrogenase activity. Involved in taurine biosynthetic process. Predicted to be located in endoplasmic reticulum membrane. Implicated in hypertension; inherited metabolic disorder; and trimethylaminuria.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: dimethylaniline monooxygenase [N-oxide-forming] 3; dimethylaniline oxidase 3; dJ127D3.1; flavin containing monooxygenase 3; flavin-containing monooxygenase 3; FMO 3; FMO form 2; FMO II; FMOII; hepatic flavin-containing monooxygenase 3; hepatic flavin-containing monooxygenase-3; MGC34400; TMAU; trimethylamine monooxygenase
RGD Orthologs
Mouse
Rat
Bonobo
Dog
Pig
Green Monkey
Alliance Genes
More Info more info ...
Related Pseudogenes: FMO6P  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,090,905 - 171,117,819 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,090,901 - 171,117,819 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,060,046 - 171,086,959 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361169,326,660 - 169,353,583 (+)NCBINCBI36Build 36hg18NCBI36
Build 341167,791,693 - 167,818,617NCBI
Celera1144,169,885 - 144,196,864 (+)NCBICelera
Cytogenetic Map1q24.3NCBI
HuRef1142,283,384 - 142,310,544 (+)NCBIHuRef
CHM1_11172,482,298 - 172,509,155 (+)NCBICHM1_1
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(S)-nicotine  (EXP)
1,2-dichloroethane  (ISO)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,3,4,7,8-Pentachlorodibenzofuran  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-isobutyl-1-methyl-7H-xanthine  (EXP,ISO)
3-methylcholanthrene  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (ISO)
9-cis,11-trans-octadecadienoic acid  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucose  (ISO)
almotriptan  (EXP)
amitriptyline  (EXP)
amitriptylinoxide  (EXP)
ammonium chloride  (ISO)
ANTU  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
Benzo[k]fluoranthene  (ISO)
benzydamine  (EXP)
beta-D-glucan  (ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
buspirone  (ISO)
C60 fullerene  (ISO)
carbon nanotube  (ISO)
chloroprene  (ISO)
cholic acid  (ISO)
choline  (ISO)
clofibrate  (ISO)
clofibric acid  (ISO)
clozapine  (EXP)
Clozapine N-oxide  (EXP)
cobalt dichloride  (ISO)
crocidolite asbestos  (ISO)
cycloheximide  (ISO)
cyclosporin A  (EXP,ISO)
D-glucose  (ISO)
dexamethasone  (EXP,ISO)
dibenz[a,h]anthracene  (ISO)
dibenzofurans  (ISO)
dichloroacetic acid  (ISO)
disodium selenite  (EXP)
diuron  (ISO)
endosulfan  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
folic acid  (ISO)
fructose  (ISO)
fumonisin B1  (ISO)
furan  (ISO)
genistein  (ISO)
glafenine  (ISO)
glucose  (ISO)
graphene oxide  (ISO)
Heliotrine  (EXP)
hexane  (ISO)
imipramine oxide  (EXP)
indometacin  (EXP)
inulin  (ISO)
L-methionine  (ISO)
metacetamol  (ISO)
metformin  (ISO)
methamphetamine  (EXP)
methimazole  (EXP,ISO)
methotrexate  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N,N-dimethyltryptamine  (EXP)
N-nitrosodiethylamine  (ISO)
N-phenylthiourea  (EXP)
N1'-[2-[[5-[(dimethylamino)methyl]-2-furanyl]methylthio]ethyl]-N1-methyl-2-nitroethene-1,1-diamine  (EXP)
naphthalene  (ISO)
nicotine  (EXP)
nitrofen  (ISO)
Olivacine  (EXP)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
paraquat  (ISO)
perazine  (EXP)
perfluorononanoic acid  (EXP)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
permethrin  (ISO)
phenobarbital  (ISO)
pirinixic acid  (ISO)
potassium dichromate  (ISO)
progesterone  (ISO)
ranitidine  (EXP)
retinyl acetate  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (EXP)
S-butyl-DL-homocysteine (S,R)-sulfoximine  (EXP)
senecionine  (ISO)
Senkirkine  (EXP)
serpentine asbestos  (ISO)
sulindac  (EXP)
sulindac sulfide  (EXP)
tamoxifen  (ISO)
tauroursodeoxycholic acid  (ISO)
temozolomide  (EXP)
testosterone  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
thiourea  (EXP)
titanium dioxide  (ISO)
topotecan  (ISO)
trimethylamine  (EXP,ISO)
trovafloxacin  (ISO)
uranium atom  (ISO)
valproic acid  (EXP,ISO)
zaragozic acid A  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Human Phenotype
References

References - curated
# Reference Title Reference Citation
1. Polymorphisms of the Flavin containing monooxygenase 3 (FMO3) gene do not predispose to essential hypertension in Caucasians. Dolan C, etal., BMC Med Genet. 2005 Dec 2;6:41.
2. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
5. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
6. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
7. RGD HPO Phenotype Annotation Pipeline RGD automated import pipeline for human HPO-to-gene-to-disease annotations
8. Mutations of the flavin-containing monooxygenase gene (FMO3) cause trimethylaminuria, a defect in detoxication. Treacy EP, etal., Hum Mol Genet. 1998 May;7(5):839-45.
Additional References at PubMed
PMID:1542660   PMID:2203193   PMID:4195988   PMID:5048998   PMID:7568243   PMID:7720103   PMID:7749747   PMID:8104117   PMID:8117928   PMID:8125298   PMID:8128486   PMID:8486388  
PMID:8654418   PMID:9207220   PMID:9398858   PMID:9417913   PMID:10338091   PMID:10479479   PMID:11191884   PMID:11266081   PMID:11551524   PMID:11717182   PMID:11809920   PMID:12477932  
PMID:12527699   PMID:12814961   PMID:12893987   PMID:12903042   PMID:15203093   PMID:15489334   PMID:15618753   PMID:15623613   PMID:16183778   PMID:16214918   PMID:16481213   PMID:16598836  
PMID:16600650   PMID:16710414   PMID:16800822   PMID:16858129   PMID:16863467   PMID:16996766   PMID:17096187   PMID:17142560   PMID:17257434   PMID:17531949   PMID:17559352   PMID:17584019  
PMID:17786630   PMID:17881660   PMID:17885620   PMID:18051367   PMID:18180394   PMID:18305374   PMID:18443301   PMID:19321370   PMID:19336370   PMID:19356079   PMID:19571433   PMID:19577495  
PMID:19761368   PMID:19898482   PMID:20056567   PMID:20173083   PMID:20182906   PMID:20198379   PMID:20301282   PMID:20529763   PMID:20679960   PMID:20734064   PMID:21075259   PMID:21873635  
PMID:22409263   PMID:22819296   PMID:22903471   PMID:23147717   PMID:23211429   PMID:23266626   PMID:23350966   PMID:23510775   PMID:23567996   PMID:23791655   PMID:23855261   PMID:24028545  
PMID:24173915   PMID:24448396   PMID:24816252   PMID:25224784   PMID:25288227   PMID:25460299   PMID:25760532   PMID:25849138   PMID:25870212   PMID:25910212   PMID:26218418   PMID:26519273  
PMID:26616280   PMID:26839369   PMID:26856397   PMID:26871637   PMID:27513517   PMID:27523475   PMID:28331852   PMID:28413702   PMID:28819071   PMID:29121650   PMID:29795455   PMID:29878384  
PMID:29959003   PMID:29981269   PMID:30351217   PMID:30381441   PMID:30690726   PMID:30814476   PMID:31515488   PMID:31580948   PMID:31993760   PMID:32156684   PMID:32296183   PMID:32653296  
PMID:32998136   PMID:33038907   PMID:33152328   PMID:33961781   PMID:34509493   PMID:34834137   PMID:35348964   PMID:36889044   PMID:37148485  


Genomics

Comparative Map Data
FMO3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381171,090,905 - 171,117,819 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1171,090,901 - 171,117,819 (+)EnsemblGRCh38hg38GRCh38
GRCh371171,060,046 - 171,086,959 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361169,326,660 - 169,353,583 (+)NCBINCBI36Build 36hg18NCBI36
Build 341167,791,693 - 167,818,617NCBI
Celera1144,169,885 - 144,196,864 (+)NCBICelera
Cytogenetic Map1q24.3NCBI
HuRef1142,283,384 - 142,310,544 (+)NCBIHuRef
CHM1_11172,482,298 - 172,509,155 (+)NCBICHM1_1
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBIT2T-CHM13v2.0
Fmo3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391162,781,368 - 162,812,097 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1162,781,369 - 162,812,097 (-)EnsemblGRCm39 Ensembl
GRCm381162,953,799 - 162,984,528 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1162,953,800 - 162,984,528 (-)EnsemblGRCm38mm10GRCm38
MGSCv371164,883,931 - 164,914,622 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361164,790,475 - 164,821,166 (-)NCBIMGSCv36mm8
Celera1165,392,349 - 165,424,291 (-)NCBICelera
Cytogenetic Map1H2.1NCBI
cM Map170.34NCBI
Fmo3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81377,838,899 - 77,868,869 (-)NCBIGRCr8
mRatBN7.21375,309,367 - 75,334,915 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1375,309,374 - 75,328,028 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1377,887,467 - 77,905,768 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01379,188,007 - 79,206,312 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01376,447,880 - 76,466,015 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01380,837,418 - 80,856,214 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1380,837,420 - 80,862,963 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01385,732,370 - 85,750,452 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41378,659,513 - 78,678,524 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11378,673,154 - 78,692,556 (-)NCBI
Celera1375,050,485 - 75,068,979 (-)NCBICelera
Cytogenetic Map13q22NCBI
FMO3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2178,639,381 - 78,665,636 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1178,313,659 - 78,339,132 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01146,583,570 - 146,611,720 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11150,298,957 - 150,325,850 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1150,298,957 - 150,325,850 (+)Ensemblpanpan1.1panPan2
FMO3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1727,720,420 - 27,745,522 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl727,720,420 - 27,845,626 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha727,247,890 - 27,272,992 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0727,522,170 - 27,547,286 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl727,522,170 - 27,547,286 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1727,372,307 - 27,397,410 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0727,407,132 - 27,432,265 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0727,649,342 - 27,674,458 (-)NCBIUU_Cfam_GSD_1.0
FMO3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl963,757,964 - 63,777,279 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1963,757,928 - 63,777,075 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2970,033,981 - 70,053,802 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FMO3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12557,971,737 - 57,995,850 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2557,969,234 - 57,995,613 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366605559,615,621 - 59,640,759 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in FMO3
191 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
NG_012690.2:g.4664_16889del deletion Trimethylaminuria [RCV000017708] Chr1:1q23-q25 pathogenic
NM_001002294.3(FMO3):c.192del (p.Glu65fs) deletion Trimethylaminuria [RCV000017710] Chr1:171103842 [GRCh38]
Chr1:171072983 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.913G>T (p.Glu305Ter) single nucleotide variant Trimethylaminuria [RCV000017697]|not provided [RCV001036315] Chr1:171114092 [GRCh38]
Chr1:171083232 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.769G>A (p.Val257Met) single nucleotide variant Trimethylaminuria [RCV000017698]|not provided [RCV003669101]|not specified [RCV000253910] Chr1:171110939 [GRCh38]
Chr1:171080080 [GRCh37]
Chr1:1q24.3		 pathogenic|benign|likely benign|conflicting interpretations of pathogenicity
NM_001002294.3(FMO3):c.198G>T (p.Met66Ile) single nucleotide variant Trimethylaminuria [RCV000017699] Chr1:171103850 [GRCh38]
Chr1:171072991 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic
NM_001002294.3(FMO3):c.154G>A (p.Ala52Thr) single nucleotide variant Trimethylaminuria [RCV000017700] Chr1:171103806 [GRCh38]
Chr1:171072947 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.458C>T (p.Pro153Leu) single nucleotide variant Trimethylaminuria [RCV000017701]|not provided [RCV002223760] Chr1:171107811 [GRCh38]
Chr1:171076952 [GRCh37]
Chr1:1q24.3		 pathogenic|conflicting interpretations of pathogenicity
NM_001002294.3(FMO3):c.1474C>T (p.Arg492Trp) single nucleotide variant Trimethylaminuria [RCV000017702]|not provided [RCV003574701] Chr1:171117317 [GRCh38]
Chr1:171086457 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic|conflicting interpretations of pathogenicity
NM_001002294.3(FMO3):c.442G>T (p.Gly148Ter) single nucleotide variant FMO3 activity, decreased [RCV000017703]|not provided [RCV003556036] Chr1:171107795 [GRCh38]
Chr1:171076936 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1160G>T (p.Arg387Leu) single nucleotide variant FMO3-related condition [RCV003398530]|Trimethylaminuria [RCV000017704] Chr1:171114339 [GRCh38]
Chr1:171083479 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic
NM_001002294.3(FMO3):c.940G>T (p.Glu314Ter) single nucleotide variant Trimethylaminuria [RCV000017705] Chr1:171114119 [GRCh38]
Chr1:171083259 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.182A>G (p.Asn61Ser) single nucleotide variant Trimethylaminuria [RCV000017706] Chr1:171103834 [GRCh38]
Chr1:171072975 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic
NM_001002294.3(FMO3):c.1302G>A (p.Met434Ile) single nucleotide variant Trimethylaminuria [RCV000017707]|not provided [RCV003556037] Chr1:171117145 [GRCh38]
Chr1:171086285 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic|uncertain significance
NM_001002294.3(FMO3):c.94G>A (p.Glu32Lys) single nucleotide variant Trimethylaminuria [RCV000017709] Chr1:171092752 [GRCh38]
Chr1:171061893 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1079T>C (p.Leu360Pro) single nucleotide variant Trimethylaminuria [RCV000020652]|not provided [RCV002513145] Chr1:171114258 [GRCh38]
Chr1:171083398 [GRCh37]
Chr1:1q24.3		 pathogenic|likely benign|other|not provided
NM_001002294.3(FMO3):c.472G>A (p.Glu158Lys) single nucleotide variant See cases [RCV002251938]|Trimethylaminuria [RCV000361492]|not provided [RCV001668146]|not specified [RCV000248637] Chr1:171107825 [GRCh38]
Chr1:171076966 [GRCh37]
Chr1:1q24.3		 pathogenic|benign
NM_001002294.3(FMO3):c.923A>G (p.Glu308Gly) single nucleotide variant Trimethylaminuria [RCV000290538]|not provided [RCV001642531]|not specified [RCV000254132] Chr1:171114102 [GRCh38]
Chr1:171083242 [GRCh37]
Chr1:1q24.3		 pathogenic|benign|likely benign
GRCh38/hg38 1q23.1-25.1(chr1:157747246-176021247)x3 copy number gain See cases [RCV000051854] Chr1:157747246..176021247 [GRCh38]
Chr1:157717036..175990383 [GRCh37]
Chr1:155983660..174257006 [NCBI36]
Chr1:1q23.1-25.1		 pathogenic
GRCh38/hg38 1q23.3-25.2(chr1:164922655-180061589)x3 copy number gain See cases [RCV000051856] Chr1:164922655..180061589 [GRCh38]
Chr1:164891892..180030724 [GRCh37]
Chr1:163158516..178297347 [NCBI36]
Chr1:1q23.3-25.2		 pathogenic
GRCh38/hg38 1q24.2-25.1(chr1:168314822-175299299)x1 copy number loss See cases [RCV000053918] Chr1:168314822..175299299 [GRCh38]
Chr1:168284060..175268435 [GRCh37]
Chr1:166550684..173535058 [NCBI36]
Chr1:1q24.2-25.1		 pathogenic
GRCh38/hg38 1q23.3-25.1(chr1:161740907-173965154)x1 copy number loss See cases [RCV000053914] Chr1:161740907..173965154 [GRCh38]
Chr1:161710697..173934292 [GRCh37]
Chr1:159977321..172200915 [NCBI36]
Chr1:1q23.3-25.1		 pathogenic
GRCh38/hg38 1q23.3-24.3(chr1:164036599-171252077)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053916]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053916]|See cases [RCV000053916] Chr1:164036599..171252077 [GRCh38]
Chr1:164005836..171221216 [GRCh37]
Chr1:162272460..169487840 [NCBI36]
Chr1:1q23.3-24.3		 pathogenic
GRCh38/hg38 1q24.1-25.1(chr1:166762832-175327423)x1 copy number loss See cases [RCV000053917] Chr1:166762832..175327423 [GRCh38]
Chr1:166732069..175296559 [GRCh37]
Chr1:164998693..173563182 [NCBI36]
Chr1:1q24.1-25.1		 pathogenic
NM_001002294.2(FMO3):c.67G>A (p.Glu23Lys) single nucleotide variant Malignant melanoma [RCV000059989] Chr1:171092725 [GRCh38]
Chr1:171061866 [GRCh37]
Chr1:169328490 [NCBI36]
Chr1:1q24.3		 not provided
NM_001002294.2(FMO3):c.1584C>T (p.Phe528=) single nucleotide variant Malignant melanoma [RCV000064306] Chr1:171117427 [GRCh38]
Chr1:171086567 [GRCh37]
Chr1:169353191 [NCBI36]
Chr1:1q24.3		 not provided
GRCh38/hg38 1q24.3-31.1(chr1:171039975-186875957)x3 copy number gain See cases [RCV000134876] Chr1:171039975..186875957 [GRCh38]
Chr1:171009116..186845089 [GRCh37]
Chr1:169275740..185111712 [NCBI36]
Chr1:1q24.3-31.1		 pathogenic
GRCh38/hg38 1q24.2-25.2(chr1:169218236-178075834)x1 copy number loss See cases [RCV000137128] Chr1:169218236..178075834 [GRCh38]
Chr1:169187474..178044969 [GRCh37]
Chr1:167454098..176311592 [NCBI36]
Chr1:1q24.2-25.2		 pathogenic
GRCh38/hg38 1q24.3-31.2(chr1:170929720-191065409)x1 copy number loss See cases [RCV000142369] Chr1:170929720..191065409 [GRCh38]
Chr1:170898861..191034539 [GRCh37]
Chr1:169165485..189301162 [NCBI36]
Chr1:1q24.3-31.2		 pathogenic
GRCh38/hg38 1q23.3-25.1(chr1:163382523-175877022)x1 copy number loss See cases [RCV000143292] Chr1:163382523..175877022 [GRCh38]
Chr1:163352313..175846158 [GRCh37]
Chr1:161618937..174112781 [NCBI36]
Chr1:1q23.3-25.1		 pathogenic
GRCh38/hg38 1q24.2-31.1(chr1:170036068-187555148)x1 copy number loss See cases [RCV000143688] Chr1:170036068..187555148 [GRCh38]
Chr1:170005209..187524280 [GRCh37]
Chr1:168271833..185790903 [NCBI36]
Chr1:1q24.2-31.1		 pathogenic
GRCh38/hg38 1q21.2-25.2(chr1:149854269-180267197)x3 copy number gain See cases [RCV000143515] Chr1:149854269..180267197 [GRCh38]
Chr1:149825831..180236332 [GRCh37]
Chr1:148092455..178502955 [NCBI36]
Chr1:1q21.2-25.2		 pathogenic
GRCh37/hg19 1q23.2-25.1(chr1:160369890-175796325) copy number loss not provided [RCV000767779] Chr1:160369890..175796325 [GRCh37]
Chr1:1q23.2-25.1		 pathogenic
NM_001002294.3(FMO3):c.*374A>G single nucleotide variant Trimethylaminuria [RCV000261426] Chr1:171117816 [GRCh38]
Chr1:171086956 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1288T>C (p.Tyr430His) single nucleotide variant Trimethylaminuria [RCV000394966] Chr1:171117131 [GRCh38]
Chr1:171086271 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.225C>T (p.Pro75=) single nucleotide variant Trimethylaminuria [RCV000396110]|not provided [RCV003698755] Chr1:171103877 [GRCh38]
Chr1:171073018 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.1539T>C (p.His513=) single nucleotide variant Trimethylaminuria [RCV000261570]|not provided [RCV003688836] Chr1:171117382 [GRCh38]
Chr1:171086522 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.706G>A (p.Val236Ile) single nucleotide variant FMO3-related condition [RCV003930209]|Trimethylaminuria [RCV000263249]|not provided [RCV003727646] Chr1:171110876 [GRCh38]
Chr1:171080017 [GRCh37]
Chr1:1q24.3		 benign|likely benign|uncertain significance
NM_001002294.3(FMO3):c.628-6T>C single nucleotide variant Trimethylaminuria [RCV000374206]|not provided [RCV000900317] Chr1:171110792 [GRCh38]
Chr1:171079933 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.979T>G (p.Phe327Val) single nucleotide variant Trimethylaminuria [RCV000347909] Chr1:171114158 [GRCh38]
Chr1:171083298 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1505T>G (p.Val502Gly) single nucleotide variant FMO3-related condition [RCV003920185]|Trimethylaminuria [RCV000358753]|not provided [RCV000959526] Chr1:171117348 [GRCh38]
Chr1:171086488 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.1204A>G (p.Met402Val) single nucleotide variant Trimethylaminuria [RCV000307703]|not provided [RCV000911384] Chr1:171116228 [GRCh38]
Chr1:171085368 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.245T>C (p.Met82Thr) single nucleotide variant Trimethylaminuria [RCV000309833] Chr1:171103897 [GRCh38]
Chr1:171073038 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.889G>T (p.Val297Leu) single nucleotide variant Trimethylaminuria [RCV000348917] Chr1:171114068 [GRCh38]
Chr1:171083208 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1184-32dup duplication not specified [RCV000246118] Chr1:171116174..171116175 [GRCh38]
Chr1:171085314..171085315 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.441C>T (p.Ser147=) single nucleotide variant Trimethylaminuria [RCV000304429]|not provided [RCV003669123]|not specified [RCV000243673] Chr1:171107794 [GRCh38]
Chr1:171076935 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.969C>T (p.Asp323=) single nucleotide variant Trimethylaminuria [RCV001098407]|not provided [RCV003542292]|not specified [RCV000246258] Chr1:171114148 [GRCh38]
Chr1:171083288 [GRCh37]
Chr1:1q24.3		 benign|likely benign
NM_001002294.3(FMO3):c.1221T>C (p.Asn407=) single nucleotide variant Trimethylaminuria [RCV000341486]|not provided [RCV000890930]|not specified [RCV000251045] Chr1:171116245 [GRCh38]
Chr1:171085385 [GRCh37]
Chr1:1q24.3		 benign|uncertain significance
NM_001002294.3(FMO3):c.830T>C (p.Val277Ala) single nucleotide variant Trimethylaminuria [RCV000388305]|not provided [RCV000973291]|not specified [RCV000246347] Chr1:171114009 [GRCh38]
Chr1:171083149 [GRCh37]
Chr1:1q24.3		 benign|likely benign
NM_001002294.3(FMO3):c.1595C>T (p.Thr532Ile) single nucleotide variant not specified [RCV000251333] Chr1:171117438 [GRCh38]
Chr1:171086578 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.627+10C>G single nucleotide variant Trimethylaminuria [RCV000321968]|not provided [RCV003660773]|not specified [RCV000248966] Chr1:171108231 [GRCh38]
Chr1:171077372 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.321+31C>A single nucleotide variant not specified [RCV000241714] Chr1:171104004 [GRCh38]
Chr1:171073145 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.132+1G>T single nucleotide variant not provided [RCV000241810] Chr1:171092791 [GRCh38]
Chr1:171061932 [GRCh37]
Chr1:1q24.3		 likely pathogenic|likely benign
NM_001002294.3(FMO3):c.585G>C (p.Ser195=) single nucleotide variant Trimethylaminuria [RCV002494744]|not provided [RCV003546496]|not specified [RCV000244370] Chr1:171108179 [GRCh38]
Chr1:171077320 [GRCh37]
Chr1:1q24.3		 benign|likely benign
NM_001002294.3(FMO3):c.1479G>A (p.Ser493=) single nucleotide variant not provided [RCV003409377]|not specified [RCV000246803] Chr1:171117322 [GRCh38]
Chr1:171086462 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.321+44_321+46del microsatellite not specified [RCV000247102] Chr1:171104013..171104015 [GRCh38]
Chr1:171073154..171073156 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.855C>T (p.Asn285=) single nucleotide variant Trimethylaminuria [RCV000296336]|not provided [RCV003669124]|not specified [RCV000249666] Chr1:171114034 [GRCh38]
Chr1:171083174 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.394G>C (p.Asp132His) single nucleotide variant Trimethylaminuria [RCV001100091]|not provided [RCV000958513]|not specified [RCV000252068] Chr1:171107747 [GRCh38]
Chr1:171076888 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.485-22G>A single nucleotide variant Trimethylaminuria [RCV001701968]|not specified [RCV000252379] Chr1:171108057 [GRCh38]
Chr1:171077198 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.1183+35T>C single nucleotide variant not specified [RCV000243011] Chr1:171114397 [GRCh38]
Chr1:171083537 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.*364C>T single nucleotide variant Trimethylaminuria [RCV000352998] Chr1:171117806 [GRCh38]
Chr1:171086946 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.*52G>A single nucleotide variant Trimethylaminuria [RCV000300480] Chr1:171117494 [GRCh38]
Chr1:171086634 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.-25G>A single nucleotide variant Trimethylaminuria [RCV000349537] Chr1:171090963 [GRCh38]
Chr1:171060104 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.430A>G (p.Met144Val) single nucleotide variant Trimethylaminuria [RCV000270329] Chr1:171107783 [GRCh38]
Chr1:171076924 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1160G>A (p.Arg387His) single nucleotide variant not provided [RCV000489148] Chr1:171114339 [GRCh38]
Chr1:171083479 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.172G>A (p.Val58Ile) single nucleotide variant Trimethylaminuria [RCV000490346]|not provided [RCV002515595] Chr1:171103824 [GRCh38]
Chr1:171072965 [GRCh37]
Chr1:1q24.3		 pathogenic|uncertain significance
NM_001002294.3(FMO3):c.591_592del (p.Cys197_Asp198delinsTer) microsatellite Trimethylaminuria [RCV000490504]|not provided [RCV002515594] Chr1:171108183..171108184 [GRCh38]
Chr1:171077324..171077325 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.260T>A (p.Ile87Asn) single nucleotide variant Trimethylaminuria [RCV000362581] Chr1:171103912 [GRCh38]
Chr1:171073053 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.994A>G (p.Ser332Gly) single nucleotide variant Trimethylaminuria [RCV000406247] Chr1:171114173 [GRCh38]
Chr1:171083313 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1322T>C (p.Ile441Thr) single nucleotide variant Trimethylaminuria [RCV001100182]|not provided [RCV003558666] Chr1:171117165 [GRCh38]
Chr1:171086305 [GRCh37]
Chr1:1q24.3		 pathogenic|uncertain significance
NM_001002294.3(FMO3):c.1462A>G (p.Thr488Ala) single nucleotide variant Trimethylaminuria [RCV001100183] Chr1:171117305 [GRCh38]
Chr1:171086445 [GRCh37]
Chr1:1q24.3		 uncertain significance
GRCh37/hg19 1q24.2-25.3(chr1:169423492-180367623) copy number gain not provided [RCV000767621] Chr1:169423492..180367623 [GRCh37]
Chr1:1q24.2-25.3		 pathogenic
GRCh37/hg19 1q23.3-25.3(chr1:161676893-184071723)x1 copy number loss See cases [RCV000447098] Chr1:161676893..184071723 [GRCh37]
Chr1:1q23.3-25.3		 pathogenic
GRCh37/hg19 1q24.2-25.3(chr1:169873155-181823980)x1 copy number loss See cases [RCV000447593] Chr1:169873155..181823980 [GRCh37]
Chr1:1q24.2-25.3		 pathogenic
NM_001002294.3(FMO3):c.859G>T (p.Glu287Ter) single nucleotide variant not provided [RCV000439141] Chr1:171114038 [GRCh38]
Chr1:171083178 [GRCh37]
Chr1:1q24.3		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684)x3 copy number gain See cases [RCV000510383] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:849467-249224684) copy number gain See cases [RCV000510926] Chr1:849467..249224684 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
NM_001002294.3(FMO3):c.370C>T (p.Gln124Ter) single nucleotide variant Trimethylaminuria [RCV000681472]|not provided [RCV001381492] Chr1:171107723 [GRCh38]
Chr1:171076864 [GRCh37]
Chr1:1q24.3		 pathogenic|likely pathogenic
NM_001002294.3(FMO3):c.442G>A (p.Gly148Arg) single nucleotide variant Trimethylaminuria [RCV000681473] Chr1:171107795 [GRCh38]
Chr1:171076936 [GRCh37]
Chr1:1q24.3		 likely pathogenic
GRCh37/hg19 1p36.33-q44(chr1:47851-249228449)x3 copy number gain not provided [RCV000736295] Chr1:47851..249228449 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1p36.33-q44(chr1:82154-249218992)x3 copy number gain not provided [RCV000736305] Chr1:82154..249218992 [GRCh37]
Chr1:1p36.33-q44		 pathogenic
GRCh37/hg19 1q23.2-25.2(chr1:159815642-177026983)x1 copy number loss not provided [RCV000736717] Chr1:159815642..177026983 [GRCh37]
Chr1:1q23.2-25.2		 pathogenic
Single allele deletion 1q24q25 microdeletion syndrome [RCV000754969] Chr1:169095250..175778910 [GRCh37]
Chr1:1q24.2-25.1		 pathogenic
NM_001002294.3(FMO3):c.743C>T (p.Pro248Leu) single nucleotide variant Trimethylaminuria [RCV001096675] Chr1:171110913 [GRCh38]
Chr1:171080054 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.585G>A (p.Ser195=) single nucleotide variant not provided [RCV000925733] Chr1:171108179 [GRCh38]
Chr1:171077320 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.549T>C (p.Asn183=) single nucleotide variant not provided [RCV000899756] Chr1:171108143 [GRCh38]
Chr1:171077284 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.929C>T (p.Ser310Leu) single nucleotide variant See cases [RCV002252234]|Trimethylaminuria [RCV000778196]|not provided [RCV003558577] Chr1:171114108 [GRCh38]
Chr1:171083248 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.906C>T (p.Asn302=) single nucleotide variant not provided [RCV000895270] Chr1:171114085 [GRCh38]
Chr1:171083225 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1123dup (p.Leu375fs) duplication Trimethylaminuria [RCV000778197] Chr1:171114299..171114300 [GRCh38]
Chr1:171083439..171083440 [GRCh37]
Chr1:1q24.3		 uncertain significance
GRCh37/hg19 1q24.2-24.3(chr1:170862952-171480090)x3 copy number gain not provided [RCV000847458] Chr1:170862952..171480090 [GRCh37]
Chr1:1q24.2-24.3		 uncertain significance
NM_001002294.3(FMO3):c.341A>G (p.Asn114Ser) single nucleotide variant FMO3-related condition [RCV003963044]|Trimethylaminuria [RCV001100090]|not provided [RCV002558009]|not specified [RCV003155360] Chr1:171107694 [GRCh38]
Chr1:171076835 [GRCh37]
Chr1:1q24.3		 benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance
NM_001002294.3(FMO3):c.1250G>A (p.Arg417His) single nucleotide variant Trimethylaminuria [RCV001100181] Chr1:171116274 [GRCh38]
Chr1:171085414 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.713G>A (p.Arg238Gln) single nucleotide variant Trimethylaminuria [RCV001096673]|not provided [RCV003558661] Chr1:171110883 [GRCh38]
Chr1:171080024 [GRCh37]
Chr1:1q24.3		 pathogenic|uncertain significance
NM_001002294.3(FMO3):c.729C>G (p.Leu243=) single nucleotide variant Trimethylaminuria [RCV001096674] Chr1:171110899 [GRCh38]
Chr1:171080040 [GRCh37]
Chr1:1q24.3		 uncertain significance
GRCh37/hg19 1q24.2-24.3(chr1:170795854-171099345)x1 copy number loss not provided [RCV000845957] Chr1:170795854..171099345 [GRCh37]
Chr1:1q24.2-24.3		 uncertain significance
GRCh37/hg19 1q24.2-25.1(chr1:167430471-174635618)x1 copy number loss not provided [RCV001005149] Chr1:167430471..174635618 [GRCh37]
Chr1:1q24.2-25.1		 pathogenic
NM_001002294.3(FMO3):c.484+13T>C single nucleotide variant Trimethylaminuria [RCV001102083] Chr1:171107850 [GRCh38]
Chr1:171076991 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.613C>T (p.Arg205Cys) single nucleotide variant Trimethylaminuria [RCV001102085]|not provided [RCV003574822]|not specified [RCV003987784] Chr1:171108207 [GRCh38]
Chr1:171077348 [GRCh37]
Chr1:1q24.3		 pathogenic|uncertain significance
NM_001002294.3(FMO3):c.1530C>T (p.Phe510=) single nucleotide variant Trimethylaminuria [RCV001100185]|not provided [RCV000886101] Chr1:171117373 [GRCh38]
Chr1:171086513 [GRCh37]
Chr1:1q24.3		 benign|uncertain significance
NM_001002294.3(FMO3):c.584C>T (p.Ser195Leu) single nucleotide variant Trimethylaminuria [RCV003230932] Chr1:171108178 [GRCh38]
Chr1:171077319 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1282A>T (p.Thr428Ser) single nucleotide variant See cases [RCV002253011] Chr1:171117125 [GRCh38]
Chr1:171086265 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1222G>T (p.Asp408Tyr) single nucleotide variant Trimethylaminuria [RCV001098409] Chr1:171116246 [GRCh38]
Chr1:171085386 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1507G>A (p.Gly503Arg) single nucleotide variant Trimethylaminuria [RCV001100184] Chr1:171117350 [GRCh38]
Chr1:171086490 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.*4T>C single nucleotide variant Trimethylaminuria [RCV001102175] Chr1:171117446 [GRCh38]
Chr1:171086586 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.*261A>G single nucleotide variant Trimethylaminuria [RCV001102176] Chr1:171117703 [GRCh38]
Chr1:171086843 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.539G>T (p.Gly180Val) single nucleotide variant Trimethylaminuria [RCV001102084]|not provided [RCV003669185] Chr1:171108133 [GRCh38]
Chr1:171077274 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.627+13G>A single nucleotide variant Trimethylaminuria [RCV001102086] Chr1:171108234 [GRCh38]
Chr1:171077375 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.684T>C (p.Gly228=) single nucleotide variant Trimethylaminuria [RCV001102088] Chr1:171110854 [GRCh38]
Chr1:171079995 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.428T>A (p.Val143Glu) single nucleotide variant Trimethylaminuria [RCV001100092] Chr1:171107781 [GRCh38]
Chr1:171076922 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.329T>C (p.Val110Ala) single nucleotide variant Trimethylaminuria [RCV001100089]|not provided [RCV003727852] Chr1:171107682 [GRCh38]
Chr1:171076823 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.132+13T>C single nucleotide variant Trimethylaminuria [RCV001098307] Chr1:171092803 [GRCh38]
Chr1:171061944 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1084G>C (p.Glu362Gln) single nucleotide variant Trimethylaminuria [RCV001098408]|not provided [RCV002557993] Chr1:171114263 [GRCh38]
Chr1:171083403 [GRCh37]
Chr1:1q24.3		 benign|uncertain significance
GRCh37/hg19 1q24.3(chr1:171048831-171338651)x1 copy number loss not provided [RCV001005152] Chr1:171048831..171338651 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.660G>A (p.Val220=) single nucleotide variant Trimethylaminuria [RCV001102087]|not provided [RCV003769072] Chr1:171110830 [GRCh38]
Chr1:171079971 [GRCh37]
Chr1:1q24.3		 likely benign|uncertain significance
NM_001002294.3(FMO3):c.1499G>A (p.Arg500Gln) single nucleotide variant Inborn genetic diseases [RCV001265831] Chr1:171117342 [GRCh38]
Chr1:171086482 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NC_000001.10:g.(?_130980840)_(248900000_?)dup duplication Gastrointestinal stromal tumor [RCV001300221]|Parathyroid carcinoma [RCV001341077] Chr1:130980840..248900000 [GRCh37]
Chr1:1q12-44		 uncertain significance
NM_001002294.3(FMO3):c.993_994del (p.Tyr331_Ser332delinsTer) microsatellite not provided [RCV003554254] Chr1:171114170..171114171 [GRCh38]
Chr1:171083310..171083311 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1139_1140del (p.Pro380fs) deletion not provided [RCV003820116] Chr1:171114317..171114318 [GRCh38]
Chr1:171083457..171083458 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.667C>T (p.Arg223Trp) single nucleotide variant Trimethylaminuria [RCV001775501] Chr1:171110837 [GRCh38]
Chr1:171079978 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.622G>T (p.Glu208Ter) single nucleotide variant Trimethylaminuria [RCV001783302]|not provided [RCV003660902] Chr1:171108216 [GRCh38]
Chr1:171077357 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.122G>A (p.Trp41Ter) single nucleotide variant Trimethylaminuria [RCV001783303] Chr1:171092780 [GRCh38]
Chr1:171061921 [GRCh37]
Chr1:1q24.3		 pathogenic
GRCh37/hg19 1q23.3-24.3(chr1:162330810-171532331) copy number loss not specified [RCV002053680] Chr1:162330810..171532331 [GRCh37]
Chr1:1q23.3-24.3		 pathogenic
GRCh37/hg19 1q24.2-24.3(chr1:167391422-171843613) copy number loss not specified [RCV002053691] Chr1:167391422..171843613 [GRCh37]
Chr1:1q24.2-24.3		 pathogenic
GRCh37/hg19 1q24.2-25.3(chr1:169873155-181823980) copy number loss not specified [RCV002053713] Chr1:169873155..181823980 [GRCh37]
Chr1:1q24.2-25.3		 pathogenic
NM_001002294.3(FMO3):c.-6-1G>C single nucleotide variant not specified [RCV003236455] Chr1:171092652 [GRCh38]
Chr1:171061793 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.971G>C (p.Cys324Ser) single nucleotide variant Inborn genetic diseases [RCV002703606] Chr1:171114150 [GRCh38]
Chr1:171083290 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.874A>G (p.Ile292Val) single nucleotide variant Inborn genetic diseases [RCV002761996] Chr1:171114053 [GRCh38]
Chr1:171083193 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.510C>G (p.Cys170Trp) single nucleotide variant Inborn genetic diseases [RCV002792994] Chr1:171108104 [GRCh38]
Chr1:171077245 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.594T>A (p.Asp198Glu) single nucleotide variant not provided [RCV002611564] Chr1:171108188 [GRCh38]
Chr1:171077329 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1003T>C (p.Tyr335His) single nucleotide variant Inborn genetic diseases [RCV003277385] Chr1:171114182 [GRCh38]
Chr1:171083322 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.673T>G (p.Trp225Gly) single nucleotide variant Inborn genetic diseases [RCV003299954] Chr1:171110843 [GRCh38]
Chr1:171079984 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1213A>G (p.Met405Val) single nucleotide variant Inborn genetic diseases [RCV003203051] Chr1:171116237 [GRCh38]
Chr1:171085377 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.926C>T (p.Thr309Ile) single nucleotide variant Inborn genetic diseases [RCV003218361] Chr1:171114105 [GRCh38]
Chr1:171083245 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1202C>A (p.Ser401Tyr) single nucleotide variant Inborn genetic diseases [RCV003195345] Chr1:171116226 [GRCh38]
Chr1:171085366 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.29C>T (p.Ala10Val) single nucleotide variant Inborn genetic diseases [RCV003199531] Chr1:171092687 [GRCh38]
Chr1:171061828 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1373C>T (p.Ala458Val) single nucleotide variant Inborn genetic diseases [RCV003197181] Chr1:171117216 [GRCh38]
Chr1:171086356 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.919A>C (p.Thr307Pro) single nucleotide variant not specified [RCV003324408] Chr1:171114098 [GRCh38]
Chr1:171083238 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.1513C>T (p.Leu505Phe) single nucleotide variant Inborn genetic diseases [RCV003377400] Chr1:171117356 [GRCh38]
Chr1:171086496 [GRCh37]
Chr1:1q24.3		 uncertain significance
NM_001002294.3(FMO3):c.10A>T (p.Lys4Ter) single nucleotide variant not provided [RCV003873474] Chr1:171092668 [GRCh38]
Chr1:171061809 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.16del (p.Ala6fs) deletion not provided [RCV003543029] Chr1:171092673 [GRCh38]
Chr1:171061814 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.484+2T>G single nucleotide variant not provided [RCV003571104] Chr1:171107839 [GRCh38]
Chr1:171076980 [GRCh37]
Chr1:1q24.3		 likely pathogenic
GRCh37/hg19 1q23.3-25.1(chr1:164571371-175708060)x1 copy number loss not provided [RCV003483966] Chr1:164571371..175708060 [GRCh37]
Chr1:1q23.3-25.1		 pathogenic
NM_001002294.3(FMO3):c.1408C>T (p.Gln470Ter) single nucleotide variant Trimethylaminuria [RCV003388358] Chr1:171117251 [GRCh38]
Chr1:171086391 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.151A>G (p.Arg51Gly) single nucleotide variant not provided [RCV003443675] Chr1:171103803 [GRCh38]
Chr1:171072944 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1569G>T (p.Leu523=) single nucleotide variant not provided [RCV003544186] Chr1:171117412 [GRCh38]
Chr1:171086552 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.411G>A (p.Ser137=) single nucleotide variant not provided [RCV003689530] Chr1:171107764 [GRCh38]
Chr1:171076905 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.322-6T>C single nucleotide variant not provided [RCV003579381] Chr1:171107669 [GRCh38]
Chr1:171076810 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1478C>T (p.Ser493Leu) single nucleotide variant not provided [RCV003576880] Chr1:171117321 [GRCh38]
Chr1:171086461 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1425C>T (p.Gly475=) single nucleotide variant not provided [RCV003692480] Chr1:171117268 [GRCh38]
Chr1:171086408 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.21C>T (p.Ile7=) single nucleotide variant not provided [RCV003547789] Chr1:171092679 [GRCh38]
Chr1:171061820 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.825_827+16del deletion not provided [RCV003695931] Chr1:171110991..171111009 [GRCh38]
Chr1:171080132..171080150 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.132+11T>C single nucleotide variant not provided [RCV003579224] Chr1:171092801 [GRCh38]
Chr1:171061942 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.625C>T (p.Gln209Ter) single nucleotide variant not provided [RCV003544172] Chr1:171108219 [GRCh38]
Chr1:171077360 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.174_175insA (p.Phe59fs) insertion not provided [RCV003716239] Chr1:171103826..171103827 [GRCh38]
Chr1:171072967..171072968 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.321+1G>T single nucleotide variant not provided [RCV003692763] Chr1:171103974 [GRCh38]
Chr1:171073115 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1210del (p.Asp404fs) deletion not provided [RCV003577403] Chr1:171116234 [GRCh38]
Chr1:171085374 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.519C>T (p.Ser173=) single nucleotide variant not provided [RCV003544721] Chr1:171108113 [GRCh38]
Chr1:171077254 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.692G>A (p.Trp231Ter) single nucleotide variant not provided [RCV003693396] Chr1:171110862 [GRCh38]
Chr1:171080003 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.42C>T (p.Gly14=) single nucleotide variant not provided [RCV003695405] Chr1:171092700 [GRCh38]
Chr1:171061841 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1184-2A>G single nucleotide variant not provided [RCV003688505] Chr1:171116206 [GRCh38]
Chr1:171085346 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.237del (p.Asn80fs) deletion not provided [RCV003693860] Chr1:171103886 [GRCh38]
Chr1:171073027 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1257-7T>C single nucleotide variant not provided [RCV003578628] Chr1:171117093 [GRCh38]
Chr1:171086233 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.768_769insAGATGACTG (p.Val257delinsArgTer) insertion not provided [RCV003545278] Chr1:171110938..171110939 [GRCh38]
Chr1:171080079..171080080 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.530_531dup (p.Glu178fs) duplication not provided [RCV003577153] Chr1:171108122..171108123 [GRCh38]
Chr1:171077263..171077264 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.559del (p.Val187fs) deletion not provided [RCV003714313] Chr1:171108153 [GRCh38]
Chr1:171077294 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1245A>G (p.Lys415=) single nucleotide variant not provided [RCV003688717] Chr1:171116269 [GRCh38]
Chr1:171085409 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.488_489del (p.Leu163fs) deletion not provided [RCV003716282] Chr1:171108082..171108083 [GRCh38]
Chr1:171077223..171077224 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1257-6C>T single nucleotide variant not provided [RCV003687045] Chr1:171117094 [GRCh38]
Chr1:171086234 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.81G>A (p.Glu27=) single nucleotide variant not provided [RCV003695766] Chr1:171092739 [GRCh38]
Chr1:171061880 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.726_729del (p.Phe242fs) deletion not provided [RCV003691999] Chr1:171110896..171110899 [GRCh38]
Chr1:171080037..171080040 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.951C>T (p.Thr317=) single nucleotide variant not provided [RCV003692070] Chr1:171114130 [GRCh38]
Chr1:171083270 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.827+17C>T single nucleotide variant not provided [RCV003688400] Chr1:171111014 [GRCh38]
Chr1:171080155 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1257G>A (p.Trp419Ter) single nucleotide variant not provided [RCV003572575] Chr1:171117100 [GRCh38]
Chr1:171086240 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.912G>A (p.Lys304=) single nucleotide variant not provided [RCV003544398] Chr1:171114091 [GRCh38]
Chr1:171083231 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.987A>C (p.Thr329=) single nucleotide variant not provided [RCV003692708] Chr1:171114166 [GRCh38]
Chr1:171083306 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.674_690del (p.Trp225fs) deletion not provided [RCV003547414] Chr1:171110842..171110858 [GRCh38]
Chr1:171079983..171079999 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.900G>A (p.Lys300=) single nucleotide variant not provided [RCV003663520] Chr1:171114079 [GRCh38]
Chr1:171083219 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.828-12T>C single nucleotide variant not provided [RCV003714309] Chr1:171113995 [GRCh38]
Chr1:171083135 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.537A>G (p.Pro179=) single nucleotide variant not provided [RCV003716211] Chr1:171108131 [GRCh38]
Chr1:171077272 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.360A>C (p.Ala120=) single nucleotide variant not provided [RCV003717761] Chr1:171107713 [GRCh38]
Chr1:171076854 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.627+10C>T single nucleotide variant not provided [RCV003549851] Chr1:171108231 [GRCh38]
Chr1:171077372 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.444A>T (p.Gly148=) single nucleotide variant not provided [RCV003579710] Chr1:171107797 [GRCh38]
Chr1:171076938 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.406G>T (p.Glu136Ter) single nucleotide variant not provided [RCV003850608] Chr1:171107759 [GRCh38]
Chr1:171076900 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1231G>T (p.Glu411Ter) single nucleotide variant not provided [RCV003580608] Chr1:171116255 [GRCh38]
Chr1:171085395 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.628-1G>A single nucleotide variant not provided [RCV003580927] Chr1:171110797 [GRCh38]
Chr1:171079938 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.102dup (p.Asn35fs) duplication not provided [RCV003703742] Chr1:171092759..171092760 [GRCh38]
Chr1:171061900..171061901 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.22_29del (p.Ile8fs) deletion not provided [RCV003580450] Chr1:171092679..171092686 [GRCh38]
Chr1:171061820..171061827 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1557A>G (p.Ala519=) single nucleotide variant not provided [RCV003717333] Chr1:171117400 [GRCh38]
Chr1:171086540 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.132+15G>C single nucleotide variant not provided [RCV003560826] Chr1:171092805 [GRCh38]
Chr1:171061946 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.393G>A (p.Arg131=) single nucleotide variant not provided [RCV003724144] Chr1:171107746 [GRCh38]
Chr1:171076887 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.839_842dup (p.Pro282fs) duplication not provided [RCV003700151] Chr1:171114015..171114016 [GRCh38]
Chr1:171083155..171083156 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.700C>T (p.Leu234=) single nucleotide variant not provided [RCV003701736] Chr1:171110870 [GRCh38]
Chr1:171080011 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1118dup (p.Ser374fs) duplication not provided [RCV003548905] Chr1:171114296..171114297 [GRCh38]
Chr1:171083436..171083437 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.627+15G>A single nucleotide variant not provided [RCV003683411] Chr1:171108236 [GRCh38]
Chr1:171077377 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.712C>A (p.Arg238=) single nucleotide variant not provided [RCV003554446] Chr1:171110882 [GRCh38]
Chr1:171080023 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1498C>T (p.Arg500Ter) single nucleotide variant not provided [RCV003562314] Chr1:171117341 [GRCh38]
Chr1:171086481 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.768C>T (p.Tyr256=) single nucleotide variant not provided [RCV003678745] Chr1:171110938 [GRCh38]
Chr1:171080079 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.391del (p.Arg131fs) deletion not provided [RCV003735917] Chr1:171107742 [GRCh38]
Chr1:171076883 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.807T>C (p.Tyr269=) single nucleotide variant not provided [RCV003736270] Chr1:171110977 [GRCh38]
Chr1:171080118 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.584C>A (p.Ser195Ter) single nucleotide variant not provided [RCV003563060] Chr1:171108178 [GRCh38]
Chr1:171077319 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.668G>A (p.Arg223Gln) single nucleotide variant not provided [RCV003562310] Chr1:171110838 [GRCh38]
Chr1:171079979 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1256+20T>C single nucleotide variant not provided [RCV003711746] Chr1:171116300 [GRCh38]
Chr1:171085440 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.930G>A (p.Ser310=) single nucleotide variant not provided [RCV003819607] Chr1:171114109 [GRCh38]
Chr1:171083249 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1506C>T (p.Val502=) single nucleotide variant not provided [RCV003711021] Chr1:171117349 [GRCh38]
Chr1:171086489 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.627+20C>T single nucleotide variant not provided [RCV003711330] Chr1:171108241 [GRCh38]
Chr1:171077382 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.485-19T>C single nucleotide variant not provided [RCV003685783] Chr1:171108060 [GRCh38]
Chr1:171077201 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.627+9C>T single nucleotide variant not provided [RCV003872495] Chr1:171108230 [GRCh38]
Chr1:171077371 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1131T>G (p.Ala377=) single nucleotide variant not provided [RCV003721031] Chr1:171114310 [GRCh38]
Chr1:171083450 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1041C>T (p.Asn347=) single nucleotide variant not provided [RCV003720373] Chr1:171114220 [GRCh38]
Chr1:171083360 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.627+12C>T single nucleotide variant not provided [RCV003682968] Chr1:171108233 [GRCh38]
Chr1:171077374 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.484+1G>A single nucleotide variant not provided [RCV003721098] Chr1:171107838 [GRCh38]
Chr1:171076979 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.894C>T (p.Ser298=) single nucleotide variant not provided [RCV003721491] Chr1:171114073 [GRCh38]
Chr1:171083213 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.827+18G>A single nucleotide variant not provided [RCV003678054] Chr1:171111015 [GRCh38]
Chr1:171080156 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1050C>T (p.Ile350=) single nucleotide variant not provided [RCV003551304] Chr1:171114229 [GRCh38]
Chr1:171083369 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.775C>T (p.Gln259Ter) single nucleotide variant not provided [RCV003555044] Chr1:171110945 [GRCh38]
Chr1:171080086 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.567G>A (p.Val189=) single nucleotide variant not provided [RCV003718845] Chr1:171108161 [GRCh38]
Chr1:171077302 [GRCh37]
Chr1:1q24.3		 likely benign
GRCh37/hg19 1q24.2-31.1(chr1:167994071-187711459)x1 copy number loss not specified [RCV003987250] Chr1:167994071..187711459 [GRCh37]
Chr1:1q24.2-31.1		 pathogenic
NM_001002294.3(FMO3):c.1237dup (p.Met413fs) duplication not provided [RCV003686168] Chr1:171116257..171116258 [GRCh38]
Chr1:171085397..171085398 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.885C>T (p.Gly295=) single nucleotide variant not provided [RCV003685719] Chr1:171114064 [GRCh38]
Chr1:171083204 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.1005C>A (p.Tyr335Ter) single nucleotide variant not provided [RCV003542634] Chr1:171114184 [GRCh38]
Chr1:171083324 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.322-8T>C single nucleotide variant not provided [RCV003722720] Chr1:171107667 [GRCh38]
Chr1:171076808 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1293T>C (p.Ile431=) single nucleotide variant not provided [RCV003706549] Chr1:171117136 [GRCh38]
Chr1:171086276 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1269C>T (p.Ser423=) single nucleotide variant not provided [RCV003738622] Chr1:171117112 [GRCh38]
Chr1:171086252 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1184-9_1184-6del deletion not provided [RCV003738623] Chr1:171116197..171116200 [GRCh38]
Chr1:171085337..171085340 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.133-2A>G single nucleotide variant not provided [RCV003723172] Chr1:171103783 [GRCh38]
Chr1:171072924 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1551C>T (p.Leu517=) single nucleotide variant not provided [RCV003853470] Chr1:171117394 [GRCh38]
Chr1:171086534 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.170C>G (p.Ser57Ter) single nucleotide variant not provided [RCV003562839] Chr1:171103822 [GRCh38]
Chr1:171072963 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.827+9G>A single nucleotide variant not provided [RCV003683412] Chr1:171111006 [GRCh38]
Chr1:171080147 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.828-13G>C single nucleotide variant not provided [RCV003552400] Chr1:171113994 [GRCh38]
Chr1:171083134 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.827+19T>C single nucleotide variant not provided [RCV003711532] Chr1:171111016 [GRCh38]
Chr1:171080157 [GRCh37]
Chr1:1q24.3		 benign
NM_001002294.3(FMO3):c.132+12G>A single nucleotide variant not provided [RCV003718743] Chr1:171092802 [GRCh38]
Chr1:171061943 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.744G>A (p.Pro248=) single nucleotide variant not provided [RCV003681101] Chr1:171110914 [GRCh38]
Chr1:171080055 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.209C>T (p.Pro70Leu) single nucleotide variant not provided [RCV003562309] Chr1:171103861 [GRCh38]
Chr1:171073002 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.778A>G (p.Met260Val) single nucleotide variant not provided [RCV003562311] Chr1:171110948 [GRCh38]
Chr1:171080089 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1183+1del deletion not provided [RCV003562312] Chr1:171114361 [GRCh38]
Chr1:171083501 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.132+9C>G single nucleotide variant not provided [RCV003709093] Chr1:171092799 [GRCh38]
Chr1:171061940 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1262G>T (p.Gly421Val) single nucleotide variant not provided [RCV003562313] Chr1:171117105 [GRCh38]
Chr1:171086245 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.1284A>G (p.Thr428=) single nucleotide variant not provided [RCV003542678] Chr1:171117127 [GRCh38]
Chr1:171086267 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1183+12A>G single nucleotide variant not provided [RCV003542730] Chr1:171114374 [GRCh38]
Chr1:171083514 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.1A>G (p.Met1Val) single nucleotide variant not provided [RCV003728698] Chr1:171092659 [GRCh38]
Chr1:171061800 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.1184-5A>G single nucleotide variant not provided [RCV003568005] Chr1:171116203 [GRCh38]
Chr1:171085343 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.712C>T (p.Arg238Ter) single nucleotide variant not provided [RCV003553660] Chr1:171110882 [GRCh38]
Chr1:171080023 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.627+11C>T single nucleotide variant not provided [RCV003550666] Chr1:171108232 [GRCh38]
Chr1:171077373 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.468A>C (p.Pro156=) single nucleotide variant not provided [RCV003564043] Chr1:171107821 [GRCh38]
Chr1:171076962 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.358_368del (p.Ala120fs) deletion not provided [RCV003552201] Chr1:171107711..171107721 [GRCh38]
Chr1:171076852..171076862 [GRCh37]
Chr1:1q24.3		 pathogenic
NM_001002294.3(FMO3):c.369C>T (p.Gly123=) single nucleotide variant not provided [RCV003552202] Chr1:171107722 [GRCh38]
Chr1:171076863 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.133-2658A>T single nucleotide variant FMO3-related condition [RCV003904470] Chr1:171101127 [GRCh38]
Chr1:171070268 [GRCh37]
Chr1:1q24.3		 likely benign
NM_001002294.3(FMO3):c.828-2A>G single nucleotide variant Trimethylaminuria [RCV003988783] Chr1:171114005 [GRCh38]
Chr1:171083145 [GRCh37]
Chr1:1q24.3		 likely pathogenic
NM_001002294.3(FMO3):c.50C>T (p.Ser17Phe) single nucleotide variant FMO3-related condition [RCV003896411] Chr1:171092708 [GRCh38]
Chr1:171061849 [GRCh37]
Chr1:1q24.3		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1278
Count of miRNA genes:637
Interacting mature miRNAs:707
Transcripts:ENST00000367755, ENST00000392085, ENST00000472784, ENST00000478457, ENST00000479749, ENST00000530212, ENST00000534514, ENST00000538429, ENST00000542847
Prediction methods:Microtar, Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
RH70128  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,086,734 - 171,086,823UniSTSGRCh37
Build 361169,353,358 - 169,353,447RGDNCBI36
Celera1144,196,639 - 144,196,728RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,310,319 - 142,310,408UniSTS
GeneMap99-GB4 RH Map1618.68UniSTS
RH1468  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,086,613 - 171,086,747UniSTSGRCh37
Build 361169,353,237 - 169,353,371RGDNCBI36
Celera1144,196,518 - 144,196,652RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,310,198 - 142,310,332UniSTS
G67587  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,059,942 - 171,060,354UniSTSGRCh37
Build 361169,326,566 - 169,326,978RGDNCBI36
Celera1144,169,809 - 144,170,221RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,283,308 - 142,283,720UniSTS
G67588  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,072,850 - 171,073,204UniSTSGRCh37
Build 361169,339,474 - 169,339,828RGDNCBI36
Celera1144,182,754 - 144,183,108RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,296,247 - 142,296,601UniSTS
G67589  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,076,757 - 171,077,123UniSTSGRCh37
Build 361169,343,381 - 169,343,747RGDNCBI36
Celera1144,186,661 - 144,187,027RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,300,154 - 142,300,520UniSTS
G67583  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,077,142 - 171,077,509UniSTSGRCh37
Build 361169,343,766 - 169,344,133RGDNCBI36
Celera1144,187,046 - 144,187,413RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,300,539 - 142,300,906UniSTS
G67584  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,079,774 - 171,080,219UniSTSGRCh37
Build 361169,346,398 - 169,346,843RGDNCBI36
Celera1144,189,678 - 144,190,123RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,303,171 - 142,303,616UniSTS
G67585  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,082,982 - 171,083,609UniSTSGRCh37
Build 361169,349,606 - 169,350,233RGDNCBI36
Celera1144,192,887 - 144,193,514RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,306,567 - 142,307,194UniSTS
G67586  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371171,085,288 - 171,085,531UniSTSGRCh37
Build 361169,351,912 - 169,352,155RGDNCBI36
Celera1144,195,193 - 144,195,436RGD
Cytogenetic Map1q24.3UniSTS
HuRef1142,308,873 - 142,309,116UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
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Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High 2 2 2 1
Medium 28 188 487 413 23 404 743 24 60 74 18 541 9 753 137
Low 2023 2034 1191 186 478 35 3265 2057 2342 242 924 847 151 451 2627 1
Below cutoff 357 556 42 21 883 24 305 110 1291 93 472 193 11 24 3

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_012690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001002294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001319173 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001319174 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_006894 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011509345 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024454365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047416207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054335490 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AH006707 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AI478384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK223166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK296105 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK298406 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK310785 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK313197 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL021026 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY895830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC032016 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM453951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471067 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KF510701 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178077 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  KU178078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M83772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  Z47552 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000367755   ⟹   ENSP00000356729
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,090,905 - 171,117,819 (+)Ensembl
RefSeq Acc Id: ENST00000472784   ⟹   ENSP00000476963
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,090,917 - 171,107,737 (+)Ensembl
RefSeq Acc Id: ENST00000478457
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,100,762 - 171,107,753 (+)Ensembl
RefSeq Acc Id: ENST00000479749   ⟹   ENSP00000477451
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,090,919 - 171,110,878 (+)Ensembl
RefSeq Acc Id: ENST00000530212
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,090,901 - 171,100,413 (+)Ensembl
RefSeq Acc Id: ENST00000534514
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1171,090,905 - 171,100,735 (+)Ensembl
RefSeq Acc Id: NM_001002294   ⟹   NP_001002294
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,090,905 - 171,117,819 (+)NCBI
GRCh371171,060,018 - 171,086,961 (+)NCBI
Build 361169,326,660 - 169,353,583 (+)NCBI Archive
HuRef1142,283,384 - 142,310,544 (+)ENTREZGENE
CHM1_11172,482,298 - 172,509,155 (+)NCBI
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001319173   ⟹   NP_001306102
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,090,905 - 171,117,819 (+)NCBI
CHM1_11172,482,298 - 172,509,155 (+)NCBI
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001319174   ⟹   NP_001306103
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,090,905 - 171,117,819 (+)NCBI
CHM1_11172,482,298 - 172,509,155 (+)NCBI
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBI
Sequence:
RefSeq Acc Id: NM_006894   ⟹   NP_008825
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,090,905 - 171,117,819 (+)NCBI
GRCh371171,060,018 - 171,086,961 (+)NCBI
Build 361169,326,660 - 169,353,583 (+)NCBI Archive
HuRef1142,283,384 - 142,310,544 (+)ENTREZGENE
CHM1_11172,482,298 - 172,509,155 (+)NCBI
T2T-CHM13v2.01170,447,248 - 170,474,197 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047416207   ⟹   XP_047272163
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,100,734 - 171,117,819 (+)NCBI
RefSeq Acc Id: XM_054335490   ⟹   XP_054191465
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.01170,457,112 - 170,474,197 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: NP_001002294   ⟸   NM_001002294
- Peptide Label: isoform a
- UniProtKB: Q14854 (UniProtKB/Swiss-Prot),   B2R816 (UniProtKB/Swiss-Prot),   Q8N5N5 (UniProtKB/Swiss-Prot),   P31513 (UniProtKB/Swiss-Prot),   A0A024R8Z4 (UniProtKB/TrEMBL),   Q53FW5 (UniProtKB/TrEMBL),   A0A0S2Z3T8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_008825   ⟸   NM_006894
- Peptide Label: isoform a
- UniProtKB: Q14854 (UniProtKB/Swiss-Prot),   B2R816 (UniProtKB/Swiss-Prot),   Q8N5N5 (UniProtKB/Swiss-Prot),   P31513 (UniProtKB/Swiss-Prot),   A0A024R8Z4 (UniProtKB/TrEMBL),   Q53FW5 (UniProtKB/TrEMBL),   A0A0S2Z3T8 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001306103   ⟸   NM_001319174
- Peptide Label: isoform c
- UniProtKB: B7Z3M2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001306102   ⟸   NM_001319173
- Peptide Label: isoform b
- UniProtKB: B7Z543 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000477451   ⟸   ENST00000479749
RefSeq Acc Id: ENSP00000356729   ⟸   ENST00000367755
RefSeq Acc Id: ENSP00000476963   ⟸   ENST00000472784
RefSeq Acc Id: XP_047272163   ⟸   XM_047416207
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054191465   ⟸   XM_054335490
- Peptide Label: isoform X1

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P31513-F1-model_v2 AlphaFold P31513 1-532 view protein structure

Promoters
RGD ID:6858100
Promoter ID:EPDNEW_H2214
Type:multiple initiation site
Name:FMO3_1
Description:flavin containing monooxygenase 3
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381171,090,905 - 171,090,965EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:3771 AgrOrtholog
COSMIC FMO3 COSMIC
Ensembl Genes ENSG00000007933 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000367755 ENTREZGENE
  ENST00000367755.9 UniProtKB/Swiss-Prot
  ENST00000472784.5 UniProtKB/TrEMBL
  ENST00000479749.1 UniProtKB/TrEMBL
Gene3D-CATH 3.50.50.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000007933 GTEx
HGNC ID HGNC:3771 ENTREZGENE
Human Proteome Map FMO3 Human Proteome Map
InterPro FAD/NAD-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase_3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:2328 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 2328 ENTREZGENE
OMIM 136132 OMIM
PANTHER DIMETHYLANILINE MONOOXYGENASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  DIMETHYLANILINE MONOOXYGENASE [N-OXIDE-FORMING] 3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FMO-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB FMO3 RGD, PharmGKB
PIRSF FMO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS ADXRDTASE UniProtKB/TrEMBL
  FMOXYGENASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FMOXYGENASE3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51905 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A024R8Z4 ENTREZGENE, UniProtKB/TrEMBL
  A0A0S2Z3R0_HUMAN UniProtKB/TrEMBL
  A0A0S2Z3T8 ENTREZGENE
  B2R816 ENTREZGENE
  B7Z3M2 ENTREZGENE, UniProtKB/TrEMBL
  B7Z543 ENTREZGENE, UniProtKB/TrEMBL
  FMO3_HUMAN UniProtKB/Swiss-Prot, ENTREZGENE
  Q14854 ENTREZGENE
  Q53FW5 ENTREZGENE, UniProtKB/TrEMBL
  Q8N5N5 ENTREZGENE
  V9GYP3_HUMAN UniProtKB/TrEMBL
  V9GZ60_HUMAN UniProtKB/TrEMBL
UniProt Secondary A0A0S2Z3T8 UniProtKB/TrEMBL
  B2R816 UniProtKB/Swiss-Prot
  Q14854 UniProtKB/Swiss-Prot
  Q8N5N5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-30 FMO3  flavin containing dimethylaniline monoxygenase 3    flavin containing monooxygenase 3  Symbol and/or name change 5135510 APPROVED