Sds (serine dehydratase) - Rat Genome Database

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Gene: Sds (serine dehydratase) Mus musculus
Analyze
Symbol: Sds
Name: serine dehydratase
RGD ID: 734054
MGI Page MGI
Description: Predicted to enable ammonia-lyase activity; protein homodimerization activity; and pyridoxal phosphate binding activity. Predicted to be involved in carboxylic acid metabolic process and protein-containing complex assembly. Predicted to act upstream of or within gluconeogenesis and lipid metabolic process. Predicted to be located in cytosol and mitochondrion. Is expressed in several structures, including genitourinary system; immune system; liver; musculature; and stomach. Orthologous to human SDS (serine dehydratase).
Type: protein-coding
RefSeq Status: PROVISIONAL
Previously known as: 4432411H13Rik; L-serine deaminase; L-serine dehydratase/L-threonine deaminase; L-threonine dehydratase; SD; SDH; TDH
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395120,614,612 - 120,621,997 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5120,614,591 - 120,621,997 (+)EnsemblGRCm39 Ensembl
GRCm385120,476,547 - 120,483,932 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5120,476,526 - 120,483,932 (+)EnsemblGRCm38mm10GRCm38
MGSCv375120,926,556 - 120,933,914 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365120,737,164 - 120,744,522 (+)NCBIMGSCv36mm8
Celera5117,560,914 - 117,568,244 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map560.63NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(1->4)-beta-D-glucan  (EXP)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
2-nitrofluorene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one  (ISO)
6-propyl-2-thiouracil  (ISO)
acetylsalicylic acid  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
aristolochic acid A  (ISO)
benzene  (ISO)
benzo[a]pyrene  (EXP,ISO)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bromobenzene  (ISO)
buspirone  (ISO)
calcitriol  (ISO)
chlorpyrifos  (EXP)
ciguatoxin CTX1B  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
corn oil  (ISO)
Cuprizon  (ISO)
cyclosporin A  (ISO)
decabromodiphenyl ether  (ISO)
diethyl maleate  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
ethanol  (ISO)
flutamide  (ISO)
glafenine  (ISO)
metformin  (ISO)
methotrexate  (ISO)
monosodium L-glutamate  (EXP)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
nefazodone  (ISO)
nimesulide  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
parathion  (EXP)
pentachlorophenol  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenethyl caffeate  (ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
phlorizin  (EXP)
piperonyl butoxide  (ISO)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (ISO)
propiconazole  (EXP)
resveratrol  (ISO)
rotenone  (ISO)
streptozocin  (ISO)
tamoxifen  (EXP)
tetrachloromethane  (EXP,ISO)
theophylline  (ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
Triptolide  (EXP)
triptonide  (EXP)
trovafloxacin  (ISO)
valdecoxib  (ISO)
valproic acid  (EXP)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
cytosol  (ISO)
mitochondrion  (ISO)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
4. Positional cloning of the murine flavivirus resistance gene. Perelygin AA, etal., Proc Natl Acad Sci U S A 2002 Jul 9;99(14):9322-7. Epub 2002 Jun 21.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1312724   PMID:7628695   PMID:10049364   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12466851   PMID:12477932   PMID:14681479   PMID:15489334   PMID:15757516  
PMID:16141072   PMID:16141073   PMID:17438133   PMID:21267068   PMID:21677750   PMID:21824517   PMID:21873635   PMID:22763616  


Genomics

Comparative Map Data
Sds
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395120,614,612 - 120,621,997 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5120,614,591 - 120,621,997 (+)EnsemblGRCm39 Ensembl
GRCm385120,476,547 - 120,483,932 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5120,476,526 - 120,483,932 (+)EnsemblGRCm38mm10GRCm38
MGSCv375120,926,556 - 120,933,914 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365120,737,164 - 120,744,522 (+)NCBIMGSCv36mm8
Celera5117,560,914 - 117,568,244 (+)NCBICelera
Cytogenetic Map5FNCBI
cM Map560.63NCBI
SDS
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3812113,392,445 - 113,403,887 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl12113,392,445 - 113,426,301 (-)EnsemblGRCh38hg38GRCh38
GRCh3712113,830,250 - 113,841,692 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3612112,314,633 - 112,326,075 (-)NCBINCBI36Build 36hg18NCBI36
Build 3412112,292,969 - 112,304,412NCBI
Celera12113,457,510 - 113,468,952 (-)NCBICelera
Cytogenetic Map12q24.13NCBI
HuRef12110,841,538 - 110,852,991 (-)NCBIHuRef
CHM1_112113,798,461 - 113,809,912 (-)NCBICHM1_1
T2T-CHM13v2.012113,369,072 - 113,380,515 (-)NCBIT2T-CHM13v2.0
Sds
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81241,743,796 - 41,751,108 (-)NCBIGRCr8
mRatBN7.21236,083,226 - 36,090,540 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1236,083,229 - 36,088,203 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1237,262,405 - 37,269,705 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01237,873,624 - 37,880,924 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01236,926,093 - 36,933,393 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01241,620,429 - 41,627,741 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1241,620,393 - 41,627,741 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01243,473,323 - 43,480,635 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41237,281,091 - 37,288,403 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11237,144,510 - 37,151,603 (-)NCBI
Celera1237,743,289 - 37,750,601 (-)NCBICelera
Cytogenetic Map12q16NCBI
Sds
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554829,643,919 - 9,653,375 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554829,646,523 - 9,653,471 (-)NCBIChiLan1.0ChiLan1.0
SDS
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v210121,476,515 - 121,491,057 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan112121,474,976 - 121,487,221 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v012110,995,164 - 111,006,668 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.112114,377,643 - 114,388,839 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl12114,377,650 - 114,388,839 (-)Ensemblpanpan1.1panPan2
SDS
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12610,725,123 - 10,728,087 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2610,846,991 - 10,854,892 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02610,969,025 - 10,976,922 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2610,969,027 - 10,976,909 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12610,942,958 - 10,950,862 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02611,005,615 - 11,013,518 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02611,054,755 - 11,062,663 (-)NCBIUU_Cfam_GSD_1.0
Sds
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118148,709,916 - 148,716,729 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049366683,206,458 - 3,215,617 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049366683,208,810 - 3,213,465 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SDS
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1438,503,933 - 38,513,878 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11438,503,922 - 38,513,908 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21440,856,187 - 40,866,181 (-)NCBISscrofa10.2Sscrofa10.2susScr3
SDS
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.111108,643,198 - 108,654,927 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl11108,642,694 - 108,654,620 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666037136,438,092 - 136,449,669 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Sds
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474719,123,927 - 19,132,307 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474719,124,706 - 19,131,757 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Sds
199 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:604
Count of miRNA genes:394
Interacting mature miRNAs:454
Transcripts:ENSMUST00000066540, ENSMUST00000111898, ENSMUST00000124978
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300801Drb2_mdopamine receptor binding 2 (mouse)Not determined587386871121387065Mouse
1300659Pcd8ts1_mp-glycoprotein positive CD8 T cell subset 1 (mouse)Not determined597021753131021986Mouse
1301362Prnr1_mprion resistance 1 (mouse)Not determined589418876146787935Mouse
1301399Cpfd3_mcerebellum pattern fissures (mouse)Not determined587386871121387065Mouse
1300913Bwefm_mbody weight females and males day 10 (mouse)Not determined5109439348143439459Mouse
1301226Bbaa2_mB.burgdorferi-associated arthritis 2 (mouse)Not determined5115156883149157015Mouse
1301102Cia14_mcollagen induced arthritis 14 (mouse)Not determined5113320385138555455Mouse
1301126Bwem1_mbody weight day 30 males 1 (mouse)Not determined587386871121387065Mouse
1300827Cora1_mcorrelation in cytokine production 1 (mouse)Not determined5115156883149157015Mouse
1300968Skts4_mskin tumor susceptibility 4 (mouse)Not determined589418876124238239Mouse
1300993Hycdc_mhypercapnic duty cycle (mouse)Not determined590561006124561151Mouse
1301624Aevm2_mautoimmune extremity vasculitis in MRL mice 2 (mouse)Not determined5101863832135864028Mouse
1301457Cfsw2_mcystic fibrosis survival to weaning 2 (mouse)Not determined590561006124561151Mouse
1300940Actd3_mactivity-distance traveled 3 (mouse)Not determined596320385130320533Mouse
1301857Bglq14_mbody growth late QTL 14 (mouse)Not determined5118948964151758149Mouse
1301858Smdq1_msegregation of mitochondrial DNA QTL 1 (mouse)Not determined597021753131021986Mouse
1301543Hypch_mhypercholesterolemia (mouse)Not determined5109238624139118905Mouse
1301974Chab7_mcholesterol absorption 7 (mouse)Not determined595233214129233330Mouse
1357644Egrd1_mearly growth rate, direct effect 1 (mouse)Not determined595434580129434786Mouse
1357662Lprq4_mlipoprotein QTL 4 (mouse)Not determined5114021753129632606Mouse
1558774Lith17_mlithogenic gene 17 (mouse)Not determined595465549129465722Mouse
4141139Hmtb4_mhemostasis and thrombosis rebleeding time 4 (mouse)Not determined108762509126882944Mouse
4141081Nidd7k_mNidd7 on KK-A (mouse)Not determined119945037149347326Mouse
4141519Hmtb5_mhemostasis and thrombosis bleeding time 5 (mouse)Not determined99949422126882944Mouse
4142473Chlq11_mcirculating hormone level QTL 11 (mouse)Not determined5107906299141906412Mouse
4142064Tmc1m4_mTmc1 modifier 4 (mouse)Not determined554500177127001072Mouse
9587780Afw16_mabdominal fat weight QTL 16 (mouse)Not determined592830166126830285Mouse
11528550Sluc33_msusceptibility to lung cancer 33 (mouse)5104386871120711986Mouse
11341716Rvfs3_mRift Valley fever susceptibility 3 (mouse)526441234138455402Mouse
10043890Trigq4_mtriglyceride QTL 4 (mouse)Not determined5107906299141906412Mouse
10043958Chldq12_mcholesterol and HDL QTL 12 (mouse)Not determined587386871121387065Mouse
10402486Dipa1_mdrug induced psychomotor activation 1 (mouse)Not determined595465549129465722Mouse
11049562Lmr24f_mleishmaniasis resistance 24f (mouse)590320962124321041Mouse
10412191Bbaa24_mB.burgdorferi-associated arthritis 24 (mouse)Not determined5119945037141700466Mouse
10412197Bbaa25_mB.burgdorferi-associated arthritis 25 (mouse)Not determined5109167240143167381Mouse
10412202Bbaa26_mB.burgdorferi-associated arthritis 26 (mouse)Not determined5104583688138555455Mouse
10412239Alpq7_malcohol preference QTL 7 (mouse)Not determined5104705939138705939Mouse
13506928Recrq8_mrecombination rate in male meiosis QTL 8 (mouse)574460661132528839Mouse
11532736Sluc33b_msusceptibility to lung cancer 33b (mouse)5102945037136945196Mouse
12859290Criq2_mCitrobacter rodentium infection QTL 2 (mouse)5101332579135332579Mouse
12904945Tammq2_mtibialis anterior muscle mass QTL 2 (mouse)5100665965134665965Mouse
12904959Smmq1_msoleus muscle mass QTL 1 (mouse)5100665965134665965Mouse
13464241Ahl18_mage related hearing loss, early onset 18 (mouse)587386871121387065Mouse
13464243Ahl20_mage related hearing loss, early onset 20 (mouse)5107906299141906412Mouse
13464244Ahl19_mage related hearing loss, early onset 19 (mouse)595465549129465722Mouse
13464251Ahl21_mage related hearing loss, early onset 21 (mouse)5109167240143167381Mouse
25314315Mlh1fc4_mMLH1 foci count 4 (mouse)574460661132528839Mouse
14746986Manh58_mmandible shape 58 (mouse)5102446283136446283Mouse
26884395Humsd2_mhumerus midshaft diameter 2, 10 week (mouse)570057343132528839Mouse
27226719Tibw6_mtibia width 6, proximal, 16 week (mouse)572857343139985755Mouse

Markers in Region
Sds  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map5FUniSTS
cM Map5 UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000066540   ⟹   ENSMUSP00000064849
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5120,614,596 - 120,621,997 (+)Ensembl
GRCm38.p6 Ensembl5120,476,531 - 120,483,932 (+)Ensembl
RefSeq Acc Id: ENSMUST00000111898   ⟹   ENSMUSP00000107529
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5120,616,951 - 120,618,752 (+)Ensembl
GRCm38.p6 Ensembl5120,478,886 - 120,480,687 (+)Ensembl
RefSeq Acc Id: ENSMUST00000124978
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5120,618,428 - 120,618,953 (+)Ensembl
GRCm38.p6 Ensembl5120,480,363 - 120,480,888 (+)Ensembl
RefSeq Acc Id: ENSMUST00000201684   ⟹   ENSMUSP00000143838
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl5120,614,591 - 120,621,997 (+)Ensembl
GRCm38.p6 Ensembl5120,476,526 - 120,483,932 (+)Ensembl
RefSeq Acc Id: NM_145565   ⟹   NP_663540
RefSeq Status: PROVISIONAL
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395120,614,612 - 120,621,970 (+)NCBI
GRCm385120,476,547 - 120,483,905 (+)NCBI
MGSCv375120,926,556 - 120,933,914 (+)RGD
Celera5117,560,914 - 117,568,244 (+)RGD
cM Map5 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006530298   ⟹   XP_006530361
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm395120,616,484 - 120,621,997 (+)NCBI
GRCm385120,478,419 - 120,483,932 (+)NCBI
Sequence:
RefSeq Acc Id: NP_663540   ⟸   NM_145565
- UniProtKB: Q8VBT2 (UniProtKB/Swiss-Prot),   Q3UEN6 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006530361   ⟸   XM_006530298
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: ENSMUSP00000064849   ⟸   ENSMUST00000066540
RefSeq Acc Id: ENSMUSP00000107529   ⟸   ENSMUST00000111898
RefSeq Acc Id: ENSMUSP00000143838   ⟸   ENSMUST00000201684
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q8VBT2-F1-model_v2 AlphaFold Q8VBT2 1-327 view protein structure

Promoters
RGD ID:6887858
Promoter ID:EPDNEW_M7380
Type:multiple initiation site
Name:Sds_1
Description:Mus musculus serine dehydratase , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm385120,476,531 - 120,476,591EPDNEW
RGD ID:6838301
Promoter ID:MM_KWN:43815
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000062308
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365120,926,351 - 120,926,851 (+)MPROMDB
RGD ID:6838297
Promoter ID:MM_KWN:43816
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000111898
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365120,927,951 - 120,928,752 (+)MPROMDB
RGD ID:6838300
Promoter ID:MM_KWN:43817
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:OTTMUST00000062310
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365120,930,301 - 120,930,801 (+)MPROMDB
RGD ID:6847948
Promoter ID:MM_ACW:39245
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney
Transcripts:SDS.CSEP07-UNSPLICED
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv365120,933,371 - 120,933,871 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:98270 AgrOrtholog
Ensembl Genes ENSMUSG00000029597 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000066540 ENTREZGENE
  ENSMUST00000066540.14 UniProtKB/Swiss-Prot
  ENSMUST00000111898.2 UniProtKB/TrEMBL
  ENSMUST00000201684.4 UniProtKB/Swiss-Prot
Gene3D-CATH 3.40.50.1100 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro PLP-dep UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_deHydtase_PyrdxlP-BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Trypto_synt_PLP_dependent UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:231691 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:98270 ENTREZGENE
NCBI Gene 231691 ENTREZGENE
PANTHER L-SERINE DEHYDRATASE/L-THREONINE DEAMINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam PALP UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Sds PhenoGen
PROSITE DEHYDRATASE_SER_THR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53686 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt D3Z221_MOUSE UniProtKB/TrEMBL
  Q3UEN6 ENTREZGENE, UniProtKB/TrEMBL
  Q8VBT2 ENTREZGENE, UniProtKB/Swiss-Prot