Ikbkb (inhibitor of kappaB kinase beta) - Rat Genome Database

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Gene: Ikbkb (inhibitor of kappaB kinase beta) Mus musculus
Analyze
Symbol: Ikbkb
Name: inhibitor of kappaB kinase beta
RGD ID: 733969
MGI Page MGI
Description: Enables IkappaB kinase activity and protein phosphatase binding activity. Involved in peptidyl-serine phosphorylation and tumor necrosis factor-mediated signaling pathway. Acts upstream of or within B cell homeostasis; positive regulation of cation channel activity; and positive regulation of sodium ion transport. Located in cytoplasmic side of plasma membrane. Part of CD40 receptor complex. Is expressed in several structures, including genitourinary system and musculature. Used to study immunodeficiency 15A. Human ortholog(s) of this gene implicated in breast cancer; combined immunodeficiency (multiple); dermatitis; prostate cancer (multiple); and type 2 diabetes mellitus. Orthologous to human IKBKB (inhibitor of nuclear factor kappa B kinase subunit beta).
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: AI132552; I-kappa-B kinase 2; I-kappa-B-kinase beta; IKK; IKK-; IKK-2; IKK-B; IKK-be; IKK-beta; IKK2; IKK2/beta; IKK[b; IKK[b]; IKKbe; IKKbeta; inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta; inhibitor of nuclear factor kappa-B kinase subunit beta; NFKBIKB; nuclear factor NF-kappa-B inhibitor kinase beta; serine/threonine protein kinase IKBKB
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,149,221 - 23,196,605 (-)NCBIGRCm39mm39
GRCm39 Ensembl823,149,228 - 23,196,605 (-)Ensembl
GRCm38822,659,205 - 22,706,589 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,659,212 - 22,706,589 (-)EnsemblGRCm38mm10GRCm38
MGSCv37823,769,677 - 23,817,055 (-)NCBIGRCm37mm9NCBIm37
MGSCv36824,125,308 - 24,172,108 (-)NCBImm8
Celera824,149,472 - 24,196,863 (-)NCBICelera
Cytogenetic Map8A2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-artemisinin  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(S)-colchicine  (EXP,ISO)
1'-acetoxychavicol acetate  (ISO)
1,2-dimethylhydrazine  (EXP)
1,2-naphthoquinone  (EXP)
1,4-dithiothreitol  (EXP,ISO)
15-oxo-ETE  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
2-acetamidofluorene  (ISO)
2-amino-2-deoxy-D-galactopyranose  (ISO)
2-amino-2-deoxy-D-glucopyranose  (EXP)
2-tert-butylhydroquinone  (ISO)
3-phenylprop-2-enal  (ISO)
4-vinylcyclohexene dioxide  (EXP)
5-aza-2'-deoxycytidine  (EXP)
[6]-Shogaol  (ISO)
acetylsalicylic acid  (EXP,ISO)
acrolein  (ISO)
afatinib  (ISO)
aflatoxin B1  (EXP,ISO)
aldehydo-D-glucosamine  (EXP)
aldehydo-D-glucose  (EXP,ISO)
aldehydo-D-ribose  (EXP)
all-trans-retinoic acid  (ISO)
allopurinol  (ISO)
alpha-pinene  (ISO)
ammonium chloride  (ISO)
anethole  (ISO)
aniline  (ISO)
anthocyanin  (EXP)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
apigenin  (ISO)
aristolochic acid  (ISO)
arjunolic acid  (EXP)
Aroclor 1254  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenic trichloride  (EXP)
arsenite(3-)  (ISO)
arsenous acid  (ISO)
atorvastatin calcium  (EXP)
Atractylodin  (EXP,ISO)
azadirachtin A  (ISO)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[e]pyrene  (ISO)
beta-D-glucosamine  (EXP)
beta-D-glucosamine 6-sulfate  (ISO)
bis(2-chloroethyl) sulfide  (EXP)
bisphenol A  (ISO)
bortezomib  (ISO)
butylated hydroxyanisole  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (EXP)
caffeine  (ISO)
calcitriol  (ISO)
cannabidiol  (ISO)
carbon atom  (ISO)
carbon nanotube  (EXP)
Carnosol  (ISO)
carvedilol  (ISO)
cerium trichloride  (EXP)
chloroquine  (ISO)
chromium atom  (EXP)
chromium(6+)  (EXP)
chrysin  (ISO)
cisplatin  (EXP,ISO)
cocaine  (ISO)
colforsin daropate hydrochloride  (EXP)
copper atom  (ISO)
copper(0)  (ISO)
curcumin  (EXP,ISO)
cytochalasin D  (ISO)
D-glucose  (EXP,ISO)
D-ribofuranose  (EXP)
deferiprone  (ISO)
dextran sulfate  (EXP)
diarsenic trioxide  (ISO)
diclofenac  (ISO)
dimercaprol  (ISO)
dimethyl fumarate  (ISO)
dimethylarsinic acid  (ISO)
dioxygen  (ISO)
dipyridamole  (EXP)
doxorubicin  (ISO)
elemental carbon  (ISO)
elemental selenium  (EXP,ISO)
endosulfan  (ISO)
enzyme inhibitor  (ISO)
ethanol  (EXP)
etoposide  (EXP)
eugenol  (ISO)
Evodiamine  (ISO)
febuxostat  (ISO)
filipin III  (ISO)
flavonoids  (ISO)
fluorescein 5-isothiocyanate  (ISO)
folic acid  (EXP)
folpet  (EXP)
fructose  (ISO)
fulvestrant  (ISO)
Fusaric acid  (ISO)
gallic acid  (ISO)
genistein  (ISO)
gentamycin  (ISO)
ginsenoside Re  (EXP)
glucose  (EXP,ISO)
glutathione  (EXP)
homoeriodictyol  (EXP)
hydrogen peroxide  (EXP,ISO)
hydroquinone  (EXP)
ibrutinib  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
iron(2+) sulfate (anhydrous)  (ISO)
Isorhapontigenin  (ISO)
L-1,4-dithiothreitol  (EXP,ISO)
lipopolysaccharide  (EXP,ISO)
LY294002  (EXP,ISO)
manganese atom  (EXP)
manganese(0)  (EXP)
manganese(II) chloride  (EXP)
mangiferin  (ISO)
melittin  (EXP,ISO)
metformin  (ISO)
methapyrilene  (ISO)
methoxyacetic acid  (ISO)
methylmercury chloride  (ISO)
miquelianin  (ISO)
Monobutylphthalate  (EXP,ISO)
monosodium L-glutamate  (EXP)
monotropein  (EXP)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (EXP)
N-[2-(4-bromocinnamylamino)ethyl]isoquinoline-5-sulfonamide  (EXP)
N-[3,5-bis(trifluoromethyl)phenyl]-5-chloro-2-hydroxybenzamide  (EXP,ISO)
N-acetyl-L-cysteine  (ISO)
N-methyl-N'-nitro-N-nitrosoguanidine  (ISO)
N-nitrosodiethylamine  (EXP)
neratinib  (ISO)
nickel dichloride  (EXP,ISO)
niclosamide  (ISO)
nitroprusside  (EXP,ISO)
Nonylphenol  (ISO)
notoginsenoside R1  (EXP)
o-anisidine  (ISO)
ozone  (ISO)
paclitaxel  (EXP,ISO)
Paeonol  (EXP)
paracetamol  (ISO)
parthenolide  (ISO)
phenobarbital  (EXP)
phenylephrine  (ISO)
phorbol 13-acetate 12-myristate  (EXP,ISO)
pioglitazone  (ISO)
platycodin D  (ISO)
potassium chromate  (ISO)
progesterone  (EXP)
protein kinase inhibitor  (ISO)
quercetin  (EXP,ISO)
reactive oxygen species  (EXP,ISO)
resiquimod  (ISO)
resveratrol  (EXP,ISO)
rocaglamide  (ISO)
SB 203580  (EXP,ISO)
selenium atom  (EXP,ISO)
selenomethionine  (ISO)
silicon dioxide  (EXP)
simvastatin  (ISO)
sodium arsenite  (EXP,ISO)
sodium aurothiomalate  (EXP)
Sodium salicylate  (EXP,ISO)
sulfasalazine  (ISO)
sulfur dioxide  (ISO)
sulindac  (ISO)
sulindac sulfide  (ISO)
sunitinib  (ISO)
taurine  (ISO)
testosterone  (ISO)
titanium dioxide  (EXP,ISO)
trans-anethole  (ISO)
Triptolide  (EXP,ISO)
triptonide  (EXP,ISO)
tungsten  (EXP)
umbelliferone  (ISO)
valproic acid  (EXP,ISO)
vincaleukoblastine  (ISO)
vorinostat  (ISO)
wedelolactone  (ISO)
zerumbone  (ISO)
zinc atom  (ISO)
zinc dichloride  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal B cell activation  (IAGP)
abnormal B cell physiology  (IEA)
abnormal bile canaliculus morphology  (IAGP)
abnormal bile duct morphology  (IAGP)
abnormal CD8-positive, alpha-beta T cell differentiation  (IEA)
abnormal cell physiology  (IAGP)
abnormal dorsal root ganglion morphology  (IAGP)
abnormal effector T cell number  (IAGP)
abnormal enzyme/coenzyme activity  (IAGP)
abnormal fibroblast migration  (IAGP)
abnormal hepatocyte morphology  (IAGP)
abnormal hindbrain morphology  (IAGP)
abnormal humoral immune response  (IAGP)
abnormal intestinal mucosa morphology  (IAGP)
abnormal myotube morphology  (IAGP)
abnormal neural fold elevation formation  (IAGP)
abnormal response to infection  (IEA)
abnormal response to injury  (IAGP)
abnormal T cell activation  (IAGP)
broad limb buds  (IAGP)
cachexia  (IAGP)
curly tail  (IAGP)
decreased acute inflammation  (IAGP)
decreased B cell number  (IAGP)
decreased B cell proliferation  (IAGP)
decreased B-1 B cell number  (IAGP)
decreased body weight  (IEA)
decreased CD4-positive, alpha beta T cell number  (IAGP)
decreased CD4-positive, CD25-positive, alpha-beta regulatory T cell number  (IAGP)
decreased CD8-positive, alpha-beta T cell number  (IAGP)
decreased central memory CD4-positive, alpha-beta T cell number  (IEA)
decreased circulating tumor necrosis factor level  (IAGP)
decreased fibroblast cell migration  (IAGP)
decreased fibroblast chemotaxis  (IAGP)
decreased follicular B cell number  (IAGP)
decreased IgE level  (IAGP)
decreased IgG level  (IAGP)
decreased IgM level  (IAGP)
decreased immature B cell number  (IAGP)
decreased interleukin-6 secretion  (IAGP)
decreased marginal zone B cell number  (IAGP)
decreased mature B cell number  (IAGP)
decreased memory B cell number  (IAGP)
decreased memory T cell number  (IAGP)
decreased regulatory T cell number  (IAGP)
decreased single-positive T cell number  (IAGP)
decreased survivor rate  (IAGP)
decreased T cell number  (IAGP)
dissociated hepatocytes  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
epidermal hyperplasia  (IAGP)
impaired macrophage chemotaxis  (IAGP)
impaired neutrophil chemotaxis  (IAGP)
impaired neutrophil recruitment  (IAGP)
increased B cell apoptosis  (IAGP)
increased B cell proliferation  (IAGP)
increased body weight  (IEA)
increased cellular sensitivity to gamma-irradiation  (IAGP)
increased circulating alanine transaminase level  (IAGP)
increased circulating bilirubin level  (IAGP)
increased embryonic neuroepithelium apoptosis  (IAGP)
increased enterocyte apoptosis  (IAGP)
increased fibroblast apoptosis  (IAGP)
increased hepatocyte apoptosis  (IAGP)
increased hindbrain apoptosis  (IAGP)
increased macrophage apoptosis  (IAGP)
increased regulatory T cell number  (IAGP)
increased response to antigen  (IEA)
increased skeletal muscle fiber number  (IAGP)
increased spinal cord apoptosis  (IAGP)
increased susceptibility to endotoxin shock  (IAGP)
increased susceptibility to viral infection  (IEA)
intestinal edema  (IAGP)
intrahepatic cholestasis  (IAGP)
jaundice  (IAGP)
lethality throughout fetal growth and development, complete penetrance  (IAGP)
liver degeneration  (IAGP)
liver hemorrhage  (IAGP)
no abnormal phenotype detected  (IAGP)
open neural tube  (IAGP)
postnatal growth retardation  (IAGP)
postnatal lethality  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality, complete penetrance  (IAGP)
preweaning lethality, incomplete penetrance  (IEA)
psoriasis  (IAGP)
skin inflammation  (IAGP)
skin lesions  (IAGP)
small embryonic telencephalon  (IAGP)
small liver  (IAGP)
References

References - curated
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21. MGD data from the GO Consortium
22. MGD IEA
23. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
24. OMIM Disease Annotation Pipeline
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35. RGD automated import pipeline for gene-chemical interactions
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Additional References at PubMed
PMID:7590248   PMID:8889548   PMID:9520401   PMID:9597130   PMID:9813230   PMID:9819420   PMID:10072378   PMID:10195895   PMID:10195896   PMID:10195897   PMID:10229185   PMID:10232975  
PMID:10349636   PMID:10359587   PMID:10373503   PMID:10523828   PMID:10523854   PMID:10593965   PMID:10748240   PMID:10898787   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11290332  
PMID:11694538   PMID:11713531   PMID:11777949   PMID:11918218   PMID:11937522   PMID:12070292   PMID:12202685   PMID:12221085   PMID:12235208   PMID:12477932   PMID:12520002   PMID:12668256  
PMID:12692538   PMID:12707341   PMID:12759443   PMID:12808104   PMID:12842894   PMID:14499113   PMID:14500727   PMID:14561702   PMID:14585846   PMID:14610273   PMID:14614859   PMID:14654787  
PMID:14660645   PMID:14741691   PMID:14755344   PMID:14960276   PMID:14963024   PMID:14963119   PMID:14966265   PMID:14978074   PMID:14983030   PMID:15021910   PMID:15029200   PMID:15070758  
PMID:15084260   PMID:15102471   PMID:15148408   PMID:15199157   PMID:15252035   PMID:15265889   PMID:15292220   PMID:15294155   PMID:15355979   PMID:15479644   PMID:15564469   PMID:15611068  
PMID:15684432   PMID:15685170   PMID:15692052   PMID:15721278   PMID:15746257   PMID:15761153   PMID:15776110   PMID:15778223   PMID:15782199   PMID:15790681   PMID:15829915   PMID:15897281  
PMID:15905851   PMID:15919917   PMID:15951441   PMID:15989949   PMID:16046471   PMID:16123045   PMID:16126728   PMID:16141072   PMID:16141073   PMID:16169504   PMID:16260493   PMID:16291755  
PMID:16306937   PMID:16317067   PMID:16319058   PMID:16378096   PMID:16413924   PMID:16469705   PMID:16498412   PMID:16547522   PMID:16602821   PMID:16612387   PMID:16775250   PMID:16807293  
PMID:16818780   PMID:16886058   PMID:16887827   PMID:16892069   PMID:16916935   PMID:16935850   PMID:16966325   PMID:17041603   PMID:17080195   PMID:17116751   PMID:17118453   PMID:17123945  
PMID:17151194   PMID:17204585   PMID:17237423   PMID:17244613   PMID:17267600   PMID:17292824   PMID:17322906   PMID:17361131   PMID:17380205   PMID:17429444   PMID:17526490   PMID:17570221  
PMID:17579036   PMID:17616684   PMID:17675566   PMID:17690092   PMID:17698569   PMID:17803913   PMID:17827258   PMID:17939994   PMID:17954568   PMID:17970697   PMID:18000063   PMID:18216269  
PMID:18240344   PMID:18266467   PMID:18287559   PMID:18299349   PMID:18308615   PMID:18316610   PMID:18321726   PMID:18391940   PMID:18393321   PMID:18432192   PMID:18490491   PMID:18490760  
PMID:18508047   PMID:18541671   PMID:18542057   PMID:18567579   PMID:18573490   PMID:18606991   PMID:18635759   PMID:18682563   PMID:18691550   PMID:18692471   PMID:18701687   PMID:18704119  
PMID:18755269   PMID:18815378   PMID:18816823   PMID:18819987   PMID:18854155   PMID:18949383   PMID:18952604   PMID:18981174   PMID:19136968   PMID:19150425   PMID:19171122   PMID:19196987  
PMID:19201871   PMID:19202066   PMID:19363130   PMID:19412180   PMID:19478205   PMID:19488402   PMID:19500387   PMID:19524538   PMID:19734906   PMID:19786027   PMID:19796012   PMID:19821485  
PMID:19828806   PMID:19897484   PMID:19959994   PMID:19962981   PMID:20007573   PMID:20007767   PMID:20018862   PMID:20080131   PMID:20097762   PMID:20129250   PMID:20195534   PMID:20200955  
PMID:20211142   PMID:20220849   PMID:20227042   PMID:20231695   PMID:20347815   PMID:20389019   PMID:20404153   PMID:20434986   PMID:20448200   PMID:20494824   PMID:20522742   PMID:20530876  
PMID:20534585   PMID:20569972   PMID:20600852   PMID:20614026   PMID:20622870   PMID:20637660   PMID:20657549   PMID:20671747   PMID:20686657   PMID:20797629   PMID:20921405   PMID:20930169  
PMID:21098220   PMID:21152019   PMID:21156282   PMID:21170027   PMID:21264230   PMID:21267068   PMID:21293322   PMID:21356358   PMID:21357939   PMID:21464320   PMID:21465579   PMID:21469085  
PMID:21490922   PMID:21533069   PMID:21537326   PMID:21576359   PMID:21587235   PMID:21606193   PMID:21642978   PMID:21677750   PMID:21701067   PMID:21728169   PMID:21765415   PMID:21775686  
PMID:21784844   PMID:21804564   PMID:21862579   PMID:21873635   PMID:21895414   PMID:21983962   PMID:21985298   PMID:21997190   PMID:22022477   PMID:22037600   PMID:22067324   PMID:22147015  
PMID:22161279   PMID:22169952   PMID:22227519   PMID:22253230   PMID:22301546   PMID:22327365   PMID:22343279   PMID:22363815   PMID:22464396   PMID:22484734   PMID:22511786   PMID:22514330  
PMID:22564672   PMID:22633953   PMID:22637744   PMID:22685314   PMID:22685599   PMID:22750522   PMID:22753500   PMID:22753932   PMID:22833419   PMID:22836752   PMID:22848663   PMID:22893683  
PMID:22915098   PMID:22940906   PMID:22988300   PMID:23011799   PMID:23023371   PMID:23241410   PMID:23273920   PMID:23296707   PMID:23332762   PMID:23349802   PMID:23349803   PMID:23555249  
PMID:23563311   PMID:23563314   PMID:23613522   PMID:23636330   PMID:23665348   PMID:23686246   PMID:23690607   PMID:23761888   PMID:23776175   PMID:23817200   PMID:23825957   PMID:23839064  
PMID:23871670   PMID:23939348   PMID:23960234   PMID:24023826   PMID:24078701   PMID:24084740   PMID:24119288   PMID:24211183   PMID:24240172   PMID:24266532   PMID:24270572   PMID:24292713  
PMID:24296718   PMID:24345681   PMID:24469399   PMID:24489962   PMID:24550492   PMID:24586253   PMID:24618907   PMID:24667561   PMID:24683189   PMID:24747690   PMID:24751519   PMID:24792914  
PMID:24799533   PMID:24832470   PMID:24882009   PMID:24911653   PMID:24912162   PMID:24993069   PMID:25057006   PMID:25132496   PMID:25172655   PMID:25176657   PMID:25253847   PMID:25267645  
PMID:25297800   PMID:25314080   PMID:25325922   PMID:25326420   PMID:25336190   PMID:25355930   PMID:25358444   PMID:25376721   PMID:25456138   PMID:25466256   PMID:25526093   PMID:25563500  
PMID:25606824   PMID:25652452   PMID:25694610   PMID:25968264   PMID:26102347   PMID:26260587   PMID:26347470   PMID:26353931   PMID:26371187   PMID:26377563   PMID:26378659   PMID:26494620  
PMID:26539991   PMID:26621452   PMID:26621453   PMID:26649818   PMID:26669856   PMID:26824076   PMID:26968344   PMID:26987064   PMID:26991836   PMID:26993069   PMID:27058114   PMID:27060662  
PMID:27099294   PMID:27320908   PMID:27387502   PMID:27450563   PMID:27582100   PMID:27814504   PMID:27822501   PMID:28017612   PMID:28017833   PMID:28060857   PMID:28185240   PMID:28190767  
PMID:28193238   PMID:28214532   PMID:28377875   PMID:28378742   PMID:28438992   PMID:28467927   PMID:28480888   PMID:28584022   PMID:28683286   PMID:28725915   PMID:28797077   PMID:28883017  
PMID:29036520   PMID:29045828   PMID:29203883   PMID:29249691   PMID:29301759   PMID:29367460   PMID:29386112   PMID:29434332   PMID:29576482   PMID:29588349   PMID:29595073   PMID:29649481  
PMID:29891719   PMID:29935185   PMID:29975753   PMID:29993183   PMID:30043530   PMID:30131424   PMID:30143619   PMID:30335863   PMID:30337470   PMID:30463808   PMID:30818064   PMID:30887211  
PMID:30982734   PMID:30988283   PMID:31086261   PMID:31088970   PMID:31439641   PMID:31481750   PMID:31552024   PMID:31618063   PMID:31792060   PMID:31903163   PMID:31989218   PMID:32117051  
PMID:32325033   PMID:32711212   PMID:32968282   PMID:32978373   PMID:33119032   PMID:33414459   PMID:33658989   PMID:33851975   PMID:33913480   PMID:34062371   PMID:34145059   PMID:34454938  
PMID:34685649  


Genomics

Comparative Map Data
Ikbkb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39823,149,221 - 23,196,605 (-)NCBIGRCm39mm39
GRCm39 Ensembl823,149,228 - 23,196,605 (-)Ensembl
GRCm38822,659,205 - 22,706,589 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl822,659,212 - 22,706,589 (-)EnsemblGRCm38mm10GRCm38
MGSCv37823,769,677 - 23,817,055 (-)NCBIGRCm37mm9NCBIm37
MGSCv36824,125,308 - 24,172,108 (-)NCBImm8
Celera824,149,472 - 24,196,863 (-)NCBICelera
Cytogenetic Map8A2NCBI
IKBKB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl842,271,302 - 42,332,460 (+)EnsemblGRCh38hg38GRCh38
GRCh38842,270,727 - 42,332,460 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37842,128,820 - 42,189,978 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36842,247,986 - 42,309,122 (+)NCBINCBI36hg18NCBI36
Build 34842,247,985 - 42,309,122NCBI
Celera841,077,798 - 41,138,835 (+)NCBI
Cytogenetic Map8p11.21NCBI
HuRef840,656,604 - 40,717,697 (+)NCBIHuRef
CHM1_1842,177,451 - 42,238,764 (+)NCBICHM1_1
Ikbkb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.21669,319,487 - 69,373,251 (+)NCBImRatBN7.2
mRatBN7.2 Ensembl1669,319,554 - 69,373,250 (+)Ensembl
Rnor_6.01674,177,233 - 74,230,809 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1674,177,215 - 74,230,815 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01673,809,854 - 73,863,636 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41673,804,730 - 73,858,510 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11673,805,346 - 73,858,348 (+)NCBI
Celera1667,214,025 - 67,266,348 (+)NCBICelera
Cytogenetic Map16q12.5NCBI
Ikbkb
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955536612,774 - 658,647 (-)EnsemblChiLan1.0
ChiLan1.0NW_004955536611,965 - 658,647 (-)NCBIChiLan1.0ChiLan1.0
IKBKB
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1838,960,594 - 39,020,971 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl838,960,594 - 39,020,971 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0841,515,613 - 41,576,229 (+)NCBIMhudiblu_PPA_v0panPan3
IKBKB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11623,359,551 - 23,419,114 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1623,359,813 - 23,419,075 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1623,864,109 - 23,923,669 (-)NCBI
ROS_Cfam_1.01625,108,158 - 25,167,347 (-)NCBI
ROS_Cfam_1.0 Ensembl1625,108,158 - 25,167,336 (-)Ensembl
UMICH_Zoey_3.11623,479,268 - 23,538,442 (-)NCBI
UNSW_CanFamBas_1.01624,042,615 - 24,101,962 (-)NCBI
UU_Cfam_GSD_1.01624,093,332 - 24,152,694 (-)NCBI
Ikbkb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440494346,401,726 - 46,450,359 (-)NCBI
SpeTri2.0NW_004936785358,128 - 406,751 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IKBKB
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1711,289,690 - 11,348,553 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11711,289,607 - 11,348,557 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21713,063,170 - 13,101,270 (+)NCBISscrofa10.2Sscrofa10.2susScr3
IKBKB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1840,267,532 - 40,325,282 (+)NCBIChlSab1.1chlSab2
ChlSab1.1 Ensembl840,268,079 - 40,326,381 (+)EnsemblChlSab1.1chlSab2
Vero_WHO_p1.0NW_0236660521,461,878 - 1,520,432 (-)NCBIVero_WHO_p1.0
Ikbkb
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624780922,524 - 978,687 (-)NCBIHetGla_female_1.0hetGla2

Position Markers
AI132552  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38822,659,335 - 22,659,621UniSTSGRCm38
MGSCv37823,769,807 - 23,770,093UniSTSGRCm37
Celera824,149,602 - 24,149,888UniSTS
Cytogenetic Map8A3-A4UniSTS
Whitehead/MRC_RH8261.26UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
13432571Scvg1_msubcutaneous vessel growth QTL 1 (mouse)8124701082Mouse
11533914Mts5_mmammary tumor susceptibility 5 (mouse)8130397432Mouse
4140978Nilac5_mnicotine induced locomotor activity 5 (mouse)Not determined8131723288Mouse
27226756Femd2_mfemur midshaft diameter 2, 5 week (mouse)8490000034600000Mouse
1357525Pnhdlc3_mplasma non-HDL cholesterol 3 (mouse)Not determined8716249923263799Mouse
1301532Scc8_mcolon tumor susceptibility 8 (mouse)Not determined8716249934642953Mouse
1300906Ap8q_malcohol preference 8 QTL (mouse)Not determined8749417341494326Mouse
1301128Sluc20_msusceptibility to lung cancer 20 (mouse)Not determined8761318541613356Mouse
1301929Eae24_msusceptibility to experimental allergic encephalomyelitis 24 (mouse)Not determined8761318541613356Mouse
10412209Cypr7_mcytokine production 7 (mouse)Not determined8761318541613356Mouse
11532713Sluc42_msusceptibility to lung cancer 42 (mouse)81339721034854071Mouse
1558870Eae36_mexperimental allergic encephalomyelitis susceptibility 36 (mouse)Not determined81472316071045600Mouse
1301088Alcw6_malcohol withdrawal 6 (mouse)Not determined81501654449016701Mouse
1300912Daq19_mdirectional asymmetry QTL 19 (mouse)Not determined81501654449016701Mouse
1301298Pgia4_mproteoglycan induced arthritis 4 (mouse)Not determined81607934550079669Mouse
4142199Poats1_mpost-ovarectomy adrenal tumor susceptibility 1 (mouse)Not determined1703261028359439Mouse
1301550Fembrs2_mfemur breaking strength 2 (mouse)Not determined81785394351854071Mouse
1301160Eae14_msusceptibility to experimental allergic encephalomyelitis 14 (mouse)Not determined81898786452987996Mouse
1300603Cd8ts2_mCD8 T cell subset 2 (mouse)Not determined81898786452987996Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir218-2mmu-miR-218-5pOncomiRDBexternal_infoNANA20933503

Predicted Target Of
Summary Value
Count of predictions:4007
Count of miRNA genes:896
Interacting mature miRNAs:1206
Transcripts:ENSMUST00000033939, ENSMUST00000063401, ENSMUST00000125314, ENSMUST00000126439, ENSMUST00000126496, ENSMUST00000131767, ENSMUST00000132279, ENSMUST00000135326, ENSMUST00000144583, ENSMUST00000144895, ENSMUST00000146212, ENSMUST00000149093, ENSMUST00000150214, ENSMUST00000150259
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001159774 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010546 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509020 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509022 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006509023 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030243303 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036153764 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_003947235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_004934772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AA203913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC121835 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF026524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF088910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK003927 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK011359 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK051128 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053346 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK086442 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK139972 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK144603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK150884 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151888 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK151955 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153151 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155587 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK156294 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK177348 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK182153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186184 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK194273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201390 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK219506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC004772 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC020334 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC037723 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY015258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466580 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000033939   ⟹   ENSMUSP00000033939
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,149,228 - 23,196,594 (-)Ensembl
GRCm38.p6 Ensembl822,659,212 - 22,706,578 (-)Ensembl
RefSeq Acc Id: ENSMUST00000063401   ⟹   ENSMUSP00000064235
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,149,784 - 23,196,605 (-)Ensembl
GRCm38.p6 Ensembl822,659,768 - 22,706,589 (-)Ensembl
RefSeq Acc Id: ENSMUST00000125314   ⟹   ENSMUSP00000138156
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,149,229 - 23,196,556 (-)Ensembl
GRCm38.p6 Ensembl822,659,213 - 22,706,540 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126439
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,181,856 - 23,196,590 (-)Ensembl
GRCm38.p6 Ensembl822,691,840 - 22,706,574 (-)Ensembl
RefSeq Acc Id: ENSMUST00000126496
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,158,027 - 23,159,042 (-)Ensembl
GRCm38.p6 Ensembl822,668,011 - 22,669,026 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131767   ⟹   ENSMUSP00000120916
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,172,773 - 23,184,081 (-)Ensembl
GRCm38.p6 Ensembl822,682,757 - 22,694,065 (-)Ensembl
RefSeq Acc Id: ENSMUST00000132279   ⟹   ENSMUSP00000120049
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,150,124 - 23,151,498 (-)Ensembl
GRCm38.p6 Ensembl822,660,108 - 22,661,482 (-)Ensembl
RefSeq Acc Id: ENSMUST00000135326   ⟹   ENSMUSP00000138378
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,149,229 - 23,196,550 (-)Ensembl
GRCm38.p6 Ensembl822,659,213 - 22,706,534 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144583
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,171,228 - 23,196,555 (-)Ensembl
GRCm38.p6 Ensembl822,681,212 - 22,706,539 (-)Ensembl
RefSeq Acc Id: ENSMUST00000144895
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,179,147 - 23,196,575 (-)Ensembl
GRCm38.p6 Ensembl822,689,131 - 22,706,559 (-)Ensembl
RefSeq Acc Id: ENSMUST00000146212
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,150,373 - 23,196,594 (-)Ensembl
GRCm38.p6 Ensembl822,660,357 - 22,706,578 (-)Ensembl
RefSeq Acc Id: ENSMUST00000149093
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,192,024 - 23,196,579 (-)Ensembl
GRCm38.p6 Ensembl822,702,008 - 22,706,563 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150214
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,192,468 - 23,196,541 (-)Ensembl
GRCm38.p6 Ensembl822,702,452 - 22,706,525 (-)Ensembl
RefSeq Acc Id: ENSMUST00000150259
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl823,166,000 - 23,196,556 (-)Ensembl
GRCm38.p6 Ensembl822,675,984 - 22,706,540 (-)Ensembl
RefSeq Acc Id: NM_001159774   ⟹   NP_001153246
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,221 - 23,196,599 (-)NCBI
GRCm38822,659,205 - 22,706,583 (-)NCBI
MGSCv37823,769,677 - 23,817,055 (-)RGD
Celera824,149,472 - 24,196,863 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_010546   ⟹   NP_034676
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,221 - 23,196,599 (-)NCBI
GRCm38822,659,205 - 22,706,583 (-)NCBI
MGSCv37823,769,677 - 23,817,055 (-)RGD
Celera824,149,472 - 24,196,863 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006509019   ⟹   XP_006509082
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,239 - 23,196,605 (-)NCBI
GRCm38822,659,212 - 22,706,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509020   ⟹   XP_006509083
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,228 - 23,196,605 (-)NCBI
GRCm38822,660,372 - 22,706,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509022   ⟹   XP_006509085
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,157,300 - 23,196,605 (-)NCBI
GRCm38822,667,298 - 22,706,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006509023   ⟹   XP_006509086
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,159,023 - 23,196,605 (-)NCBI
GRCm38822,669,077 - 22,706,589 (-)NCBI
Sequence:
RefSeq Acc Id: XM_030243303   ⟹   XP_030099163
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,228 - 23,196,598 (-)NCBI
GRCm38822,660,373 - 22,706,584 (-)NCBI
Sequence:
RefSeq Acc Id: XM_036153764   ⟹   XP_036009657
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,239 - 23,196,596 (-)NCBI
Sequence:
RefSeq Acc Id: XR_003947235
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,153,811 - 23,196,605 (-)NCBI
GRCm38822,659,212 - 22,706,589 (-)NCBI
Sequence:
RefSeq Acc Id: XR_004934772
RefSeq Status:
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39823,149,228 - 23,196,605 (-)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_034676   ⟸   NM_010546
- Peptide Label: isoform 2
- UniProtKB: O88351 (UniProtKB/Swiss-Prot),   A0A0R4J0T4 (UniProtKB/TrEMBL),   Q5D0E0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001153246   ⟸   NM_001159774
- Peptide Label: isoform 1
- UniProtKB: Q5D0E0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006509082   ⟸   XM_006509019
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_006509083   ⟸   XM_006509020
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_006509085   ⟸   XM_006509022
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_006509086   ⟸   XM_006509023
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_030099163   ⟸   XM_030243303
- Peptide Label: isoform X5
RefSeq Acc Id: ENSMUSP00000138156   ⟸   ENSMUST00000125314
RefSeq Acc Id: ENSMUSP00000120049   ⟸   ENSMUST00000132279
RefSeq Acc Id: ENSMUSP00000120916   ⟸   ENSMUST00000131767
RefSeq Acc Id: ENSMUSP00000033939   ⟸   ENSMUST00000033939
RefSeq Acc Id: ENSMUSP00000138378   ⟸   ENSMUST00000135326
RefSeq Acc Id: ENSMUSP00000064235   ⟸   ENSMUST00000063401
RefSeq Acc Id: XP_036009657   ⟸   XM_036153764
- Peptide Label: isoform X4
Protein Domains
IKKbetaNEMObind   Protein kinase

Promoters
RGD ID:8666689
Promoter ID:EPDNEW_M11376
Type:initiation region
Name:Ikbkb_1
Description:Mus musculus inhibitor of kappaB kinase beta , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38822,706,559 - 22,706,619EPDNEW
RGD ID:6843312
Promoter ID:MM_KWN:53934
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Lung
Transcripts:OTTMUST00000048779
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36823,803,831 - 23,804,331 (-)MPROMDB
RGD ID:6843338
Promoter ID:MM_KWN:53935
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4
Transcripts:NM_001159774,   OTTMUST00000048768,   OTTMUST00000048770,   OTTMUST00000048771,   OTTMUST00000048773,   OTTMUST00000048775,   OTTMUST00000048776,   UC009LDN.1,   UC009LDP.1,   UC009LDQ.1,   UC009LDS.1,   UC009LDV.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36823,816,774 - 23,817,274 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1338071 AgrOrtholog
Ensembl Genes ENSMUSG00000031537 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000033939 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000064235 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000120049 UniProtKB/TrEMBL
  ENSMUSP00000120916 UniProtKB/TrEMBL
  ENSMUSP00000138156 UniProtKB/TrEMBL
  ENSMUSP00000138378 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000033939 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000063401 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000125314 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000131767 UniProtKB/TrEMBL
  ENSMUST00000132279 UniProtKB/TrEMBL
  ENSMUST00000135326 ENTREZGENE, UniProtKB/TrEMBL
InterPro IKBKB_SDD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IKKbetaNEMObind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16150 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1338071 ENTREZGENE
NCBI Gene 16150 ENTREZGENE
Pfam IKBKB_SDD UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IKKbetaNEMObind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pkinase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Ikbkb PhenoGen
PROSITE PROTEIN_KINASE_DOM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART IKKbetaNEMObind UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  S_TKc UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF56112 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A0R4J0T4 ENTREZGENE, UniProtKB/TrEMBL
  F6ULQ4_MOUSE UniProtKB/TrEMBL
  F6XPL0_MOUSE UniProtKB/TrEMBL
  IKKB_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q05DR8_MOUSE UniProtKB/TrEMBL
  Q3U141_MOUSE UniProtKB/TrEMBL
  Q3USX8_MOUSE UniProtKB/TrEMBL
  Q3V454_MOUSE UniProtKB/TrEMBL
  Q5D0E0 ENTREZGENE, UniProtKB/TrEMBL
  Q8BQA9_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q9R1J6 UniProtKB/Swiss-Prot