CLTA (clathrin light chain A) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: CLTA (clathrin light chain A) Homo sapiens
Analyze
Symbol: CLTA
Name: clathrin light chain A
RGD ID: 733774
HGNC Page HGNC
Description: Exhibits clathrin heavy chain binding activity. Involved in clathrin coat assembly. Localizes to clathrin complex.
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: clathrin, light chain A; clathrin, light polypeptide (Lca); LCA
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: LOC100131676   LOC100431174  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl936,190,856 - 36,304,781 (+)EnsemblGRCh38hg38GRCh38
GRCh38936,190,855 - 36,212,059 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37936,190,918 - 36,212,056 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36936,180,892 - 36,202,056 (+)NCBINCBI36hg18NCBI36
Build 34936,180,988 - 36,202,055NCBI
Celera936,124,438 - 36,145,644 (+)NCBI
Cytogenetic Map9p13.3NCBI
HuRef936,144,777 - 36,166,054 (+)NCBIHuRef
CHM1_1936,191,259 - 36,212,465 (+)NCBICHM1_1
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:1975516   PMID:2204686   PMID:2211724   PMID:2406259   PMID:3267234   PMID:4066749   PMID:7713494   PMID:8125298   PMID:8413590   PMID:9314527   PMID:9651214   PMID:10567358  
PMID:11031247   PMID:11157096   PMID:11252894   PMID:11756460   PMID:11889126   PMID:12057195   PMID:12426379   PMID:12477932   PMID:12589051   PMID:12692238   PMID:15146197   PMID:15164053  
PMID:15489334   PMID:15533940   PMID:16138905   PMID:16595675   PMID:16799092   PMID:17110338   PMID:17140399   PMID:17213182   PMID:17581864   PMID:17620599   PMID:18165318   PMID:18548008  
PMID:18602423   PMID:18854154   PMID:18977142   PMID:19144635   PMID:19615732   PMID:19738201   PMID:19913121   PMID:19946888   PMID:20012528   PMID:20562859   PMID:20628086   PMID:21145461  
PMID:21152103   PMID:21203429   PMID:21289110   PMID:21297582   PMID:21611203   PMID:21704113   PMID:21738476   PMID:21873635   PMID:21900206   PMID:21988832   PMID:22623428   PMID:23304142  
PMID:23398456   PMID:23460120   PMID:24711643   PMID:25107275   PMID:25144556   PMID:25437307   PMID:25898166   PMID:25921289   PMID:26344197   PMID:26496610   PMID:26816005   PMID:26975582  
PMID:27173435   PMID:27684187   PMID:27880917   PMID:28378594   PMID:28533407   PMID:29117863   PMID:29478914   PMID:29509190   PMID:29511261   PMID:29568061   PMID:29735542   PMID:29845934  
PMID:30021884   PMID:30196744   PMID:30833792   PMID:30948266   PMID:31091453   PMID:31253590   PMID:31586073   PMID:31617661   PMID:31672988   PMID:32203420   PMID:32962859   PMID:33144569  


Genomics

Comparative Map Data
CLTA
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl936,190,856 - 36,304,781 (+)EnsemblGRCh38hg38GRCh38
GRCh38936,190,855 - 36,212,059 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37936,190,918 - 36,212,056 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36936,180,892 - 36,202,056 (+)NCBINCBI36hg18NCBI36
Build 34936,180,988 - 36,202,055NCBI
Celera936,124,438 - 36,145,644 (+)NCBI
Cytogenetic Map9p13.3NCBI
HuRef936,144,777 - 36,166,054 (+)NCBIHuRef
CHM1_1936,191,259 - 36,212,465 (+)NCBICHM1_1
Clta
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39444,003,816 - 44,032,846 (+)NCBIGRCm39mm39
GRCm39 Ensembl444,004,452 - 44,032,846 (+)Ensembl
GRCm38444,003,816 - 44,032,846 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl444,004,452 - 44,032,846 (+)EnsemblGRCm38mm10GRCm38
MGSCv37444,025,515 - 44,045,718 (+)NCBIGRCm37mm9NCBIm37
MGSCv36444,033,784 - 44,053,946 (+)NCBImm8
Celera444,033,842 - 44,054,042 (+)NCBICelera
Cytogenetic Map4B1NCBI
Clta
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2558,244,253 - 58,263,480 (+)NCBI
Rnor_6.0 Ensembl559,491,096 - 59,509,138 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0559,490,689 - 59,509,139 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0564,012,881 - 64,031,657 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4560,484,437 - 60,502,432 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.1560,484,615 - 60,502,611 (+)NCBI
Celera556,823,904 - 56,841,911 (+)NCBICelera
Cytogenetic Map5q22NCBI
Clta
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495547297,235 - 117,144 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495547296,958 - 117,230 (-)NCBIChiLan1.0ChiLan1.0
CLTA
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1936,841,477 - 36,862,528 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl936,840,868 - 36,862,528 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0936,040,566 - 36,061,744 (+)NCBIMhudiblu_PPA_v0panPan3
CLTA
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11152,636,328 - 52,681,258 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1152,615,039 - 52,681,270 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1151,227,019 - 51,271,906 (+)NCBI
ROS_Cfam_1.01153,742,643 - 53,787,381 (+)NCBI
UMICH_Zoey_3.11152,245,564 - 52,290,214 (+)NCBI
UNSW_CanFamBas_1.01152,267,619 - 52,312,459 (+)NCBI
UU_Cfam_GSD_1.01152,969,170 - 53,014,020 (+)NCBI
Clta
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947167,622,904 - 167,644,372 (+)NCBI
SpeTri2.0NW_0049365244,170,425 - 4,191,951 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CLTA
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1236,971,505 - 237,001,769 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11236,971,317 - 236,993,291 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21264,772,770 - 264,783,359 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CLTA
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11244,346,169 - 44,367,626 (-)NCBI
ChlSab1.1 Ensembl1244,344,395 - 44,367,619 (-)Ensembl
Clta
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248684,419,554 - 4,443,475 (-)NCBI

Position Markers
RH79677  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,726 - 36,212,019UniSTSGRCh37
Build 36936,201,726 - 36,202,019RGDNCBI36
Celera936,145,311 - 36,145,604RGD
Cytogenetic Map9p13UniSTS
HuRef936,165,721 - 36,166,014UniSTS
RH74929  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,763 - 36,212,010UniSTSGRCh37
Build 36936,201,763 - 36,202,010RGDNCBI36
Celera936,145,348 - 36,145,595RGD
Cytogenetic Map9p13UniSTS
HuRef936,165,758 - 36,166,005UniSTS
G43533  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,772 - 36,211,971UniSTSGRCh37
Build 36936,201,772 - 36,201,971RGDNCBI36
Celera936,145,357 - 36,145,556RGD
Cytogenetic Map9p13UniSTS
HuRef936,165,767 - 36,165,966UniSTS
TNG Radiation Hybrid Map919529.0UniSTS
AV026556  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,924 - 36,212,020UniSTSGRCh37
GRCh37815,546,174 - 15,546,271UniSTSGRCh37
Build 36815,590,545 - 15,590,642RGDNCBI36
Celera936,145,509 - 36,145,605UniSTS
Celera814,510,140 - 14,510,237RGD
HuRef936,165,919 - 36,166,015UniSTS
HuRef814,090,428 - 14,090,525UniSTS
STS-M20471  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,823 - 36,212,011UniSTSGRCh37
Build 36936,201,823 - 36,202,011RGDNCBI36
Celera936,145,408 - 36,145,596RGD
Cytogenetic Map9p13UniSTS
HuRef936,165,818 - 36,166,006UniSTS
GeneMap99-GB4 RH Map9140.52UniSTS
RH67858  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37936,211,825 - 36,212,007UniSTSGRCh37
Build 36936,201,825 - 36,202,007RGDNCBI36
Celera936,145,410 - 36,145,592RGD
Cytogenetic Map9p13UniSTS
HuRef936,165,820 - 36,166,002UniSTS
GeneMap99-GB4 RH Map9149.76UniSTS

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2227
Count of miRNA genes:610
Interacting mature miRNAs:675
Transcripts:ENST00000242285, ENST00000345519, ENST00000396603, ENST00000433436, ENST00000464497, ENST00000466396, ENST00000470744, ENST00000493185, ENST00000538225, ENST00000540080
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system visual system adipose tissue appendage entire extraembryonic component pharyngeal arch
High 15 1
Medium 2439 2886 1725 623 1896 464 4354 2144 3732 418 1445 1611 174 1 1204 2785 6 2
Low 105 1 1 55 1 3 53 2 1 2 3
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001076677 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184761 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001184762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311204 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001311206 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001833 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_007096 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_132349 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017014258 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_024447409 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK225153 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK291078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK295692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL158830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC009201 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BF797444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI090227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BI600540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM423666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BT007170 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA306784 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA441539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN300759 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DN991152 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ270158 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DT220470 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M20471 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M20472 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000242285   ⟹   ENSP00000242285
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,937 - 36,212,059 (+)Ensembl
RefSeq Acc Id: ENST00000345519   ⟹   ENSP00000242284
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,921 - 36,212,059 (+)Ensembl
RefSeq Acc Id: ENST00000396603   ⟹   ENSP00000379848
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,963 - 36,212,059 (+)Ensembl
RefSeq Acc Id: ENST00000433436   ⟹   ENSP00000401019
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,856 - 36,212,061 (+)Ensembl
RefSeq Acc Id: ENST00000464497   ⟹   ENSP00000419158
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,931 - 36,304,781 (+)Ensembl
RefSeq Acc Id: ENST00000466396   ⟹   ENSP00000417698
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,963 - 36,211,784 (+)Ensembl
RefSeq Acc Id: ENST00000470744   ⟹   ENSP00000419746
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,932 - 36,212,058 (+)Ensembl
RefSeq Acc Id: ENST00000493185   ⟹   ENSP00000474266
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,191,165 - 36,212,057 (+)Ensembl
RefSeq Acc Id: ENST00000538225   ⟹   ENSP00000442869
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,856 - 36,212,061 (+)Ensembl
RefSeq Acc Id: ENST00000540080   ⟹   ENSP00000437508
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p13 Ensembl936,190,856 - 36,212,061 (+)Ensembl
RefSeq Acc Id: NM_001076677   ⟹   NP_001070145
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)NCBI
Build 36936,180,892 - 36,202,056 (+)NCBI Archive
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001184760   ⟹   NP_001171689
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)ENTREZGENE
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001184761   ⟹   NP_001171690
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)ENTREZGENE
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001184762   ⟹   NP_001171691
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)ENTREZGENE
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001311203   ⟹   NP_001298132
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001311204   ⟹   NP_001298133
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001311205   ⟹   NP_001298134
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001311206   ⟹   NP_001298135
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001833   ⟹   NP_001824
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)ENTREZGENE
Build 36936,180,892 - 36,202,056 (+)NCBI Archive
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NM_007096   ⟹   NP_009027
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
GRCh37936,190,853 - 36,212,059 (+)NCBI
Build 36936,180,892 - 36,202,056 (+)NCBI Archive
HuRef936,144,777 - 36,166,054 (+)ENTREZGENE
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: NR_132349
RefSeq Status: REVIEWED
Type: NON-CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,921 - 36,212,059 (+)NCBI
CHM1_1936,191,259 - 36,212,465 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017014257   ⟹   XP_016869746
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,888 - 36,212,059 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017014258   ⟹   XP_016869747
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,886 - 36,212,059 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024447409   ⟹   XP_024303177
RefSeq Status:
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,855 - 36,212,059 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_009027   ⟸   NM_007096
- Peptide Label: isoform b
- UniProtKB: P09496 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001070145   ⟸   NM_001076677
- Peptide Label: isoform c
- UniProtKB: P09496 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001171689   ⟸   NM_001184760
- Peptide Label: isoform d
- UniProtKB: P09496 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001824   ⟸   NM_001833
- Peptide Label: isoform a
- UniProtKB: P09496 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001171690   ⟸   NM_001184761
- Peptide Label: isoform e
- Sequence:
RefSeq Acc Id: NP_001171691   ⟸   NM_001184762
- Peptide Label: isoform f
- UniProtKB: P09496 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001298135   ⟸   NM_001311206
- Peptide Label: isoform j
- Sequence:
RefSeq Acc Id: NP_001298133   ⟸   NM_001311204
- Peptide Label: isoform h
- UniProtKB: C9J8P9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001298134   ⟸   NM_001311205
- Peptide Label: isoform i
- Sequence:
RefSeq Acc Id: NP_001298132   ⟸   NM_001311203
- Peptide Label: isoform g
- Sequence:
RefSeq Acc Id: XP_016869747   ⟸   XM_017014258
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_016869746   ⟸   XM_017014257
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_024303177   ⟸   XM_024447409
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: ENSP00000242284   ⟸   ENST00000345519
RefSeq Acc Id: ENSP00000419158   ⟸   ENST00000464497
RefSeq Acc Id: ENSP00000417698   ⟸   ENST00000466396
RefSeq Acc Id: ENSP00000242285   ⟸   ENST00000242285
RefSeq Acc Id: ENSP00000474266   ⟸   ENST00000493185
RefSeq Acc Id: ENSP00000442869   ⟸   ENST00000538225
RefSeq Acc Id: ENSP00000419746   ⟸   ENST00000470744
RefSeq Acc Id: ENSP00000401019   ⟸   ENST00000433436
RefSeq Acc Id: ENSP00000379848   ⟸   ENST00000396603
RefSeq Acc Id: ENSP00000437508   ⟸   ENST00000540080

Promoters
RGD ID:6807398
Promoter ID:HG_KWN:63133
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:NM_001076677,   NM_001184760,   NM_001184761,   NM_001184762,   NM_001833,   NM_007096,   UC003ZZF.1
Position:
Human AssemblyChrPosition (strand)Source
Build 36936,180,091 - 36,180,997 (+)MPROMDB
RGD ID:6852208
Promoter ID:EP73910
Type:initiation region
Name:HS_CLTA
Description:Clathrin, light polypeptide (Lca).
SO ACC ID:SO:0000170
Source:EPD (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Mammalian gene collection (MGC) full-length cDNA cloning
Position:
Human AssemblyChrPosition (strand)Source
Build 36936,180,965 - 36,181,025EPD
RGD ID:7215063
Promoter ID:EPDNEW_H13277
Type:initiation region
Name:CLTA_1
Description:clathrin light chain A
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38936,190,923 - 36,190,983EPDNEW

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 9p24.3-13.1(chr9:204193-38815478)x3 copy number gain See cases [RCV000050357] Chr9:204193..38815478 [GRCh38]
Chr9:204193..38815475 [GRCh37]
Chr9:194193..38805475 [NCBI36]
Chr9:9p24.3-13.1
pathogenic|conflicting interpretations of pathogenicity|conflicting data from submitters
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000050348] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:204193-38741440)x3 copy number gain See cases [RCV000051106] Chr9:204193..38741440 [GRCh38]
Chr9:204193..38741437 [GRCh37]
Chr9:194193..38731437 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:203993-38815619)x3 copy number gain See cases [RCV000053703] Chr9:203993..38815619 [GRCh38]
Chr9:203993..38815616 [GRCh37]
Chr9:193993..38805616 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 copy number gain See cases [RCV000053745] Chr9:193412..138124532 [GRCh38]
Chr9:204193..141018984 [GRCh37]
Chr9:194193..140138805 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:220253-38815419)x3 copy number gain See cases [RCV000053747] Chr9:220253..38815419 [GRCh38]
Chr9:220253..38815416 [GRCh37]
Chr9:210253..38805416 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] Chr9:193412..138179445 [GRCh38]
Chr9:266045..141073897 [GRCh37]
Chr9:256045..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 copy number gain See cases [RCV000053746] Chr9:193412..138114463 [GRCh38]
Chr9:214367..141008915 [GRCh37]
Chr9:204367..140128736 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) copy number gain See cases [RCV000133791] Chr9:204193..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p13.3-13.1(chr9:33225730-38529813)x3 copy number gain See cases [RCV000133829] Chr9:33225730..38529813 [GRCh38]
Chr9:33225728..38529810 [GRCh37]
Chr9:33215728..38519810 [NCBI36]
Chr9:9p13.3-13.1
pathogenic
GRCh38/hg38 9p13.3-13.1(chr9:35623500-38815474)x3 copy number gain See cases [RCV000134038] Chr9:35623500..38815474 [GRCh38]
Chr9:35623497..38815471 [GRCh37]
Chr9:35613497..38805471 [NCBI36]
Chr9:9p13.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:13997-68401065)x3 copy number gain See cases [RCV000135344] Chr9:13997..68401065 [GRCh38]
Chr9:13997..71015981 [GRCh37]
Chr9:3997..70205801 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic
GRCh38/hg38 9p13.3-13.2(chr9:33572681-36782015)x1 copy number loss See cases [RCV000134762] Chr9:33572681..36782015 [GRCh38]
Chr9:33572679..36782012 [GRCh37]
Chr9:33562679..36772012 [NCBI36]
Chr9:9p13.3-13.2
pathogenic
GRCh38/hg38 9p24.3-q21.12(chr9:193412-70630731)x3 copy number gain See cases [RCV000136152] Chr9:193412..70630731 [GRCh38]
Chr9:220253..73245647 [GRCh37]
Chr9:210253..72435467 [NCBI36]
Chr9:9p24.3-q21.12
pathogenic
GRCh38/hg38 9p24.3-q21.13(chr9:193412-74615913)x3 copy number gain See cases [RCV000135954] Chr9:193412..74615913 [GRCh38]
Chr9:204193..77230829 [GRCh37]
Chr9:194193..76420649 [NCBI36]
Chr9:9p24.3-q21.13
pathogenic
GRCh38/hg38 9p24.1-13.2(chr9:7162304-37038771)x3 copy number gain See cases [RCV000137741] Chr9:7162304..37038771 [GRCh38]
Chr9:7162304..37038768 [GRCh37]
Chr9:7152304..37028768 [NCBI36]
Chr9:9p24.1-13.2
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:204104-66233120)x4 copy number gain See cases [RCV000137888] Chr9:204104..66233120 [GRCh38]
Chr9:204104..47212321 [GRCh37]
Chr9:194104..47002141 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic|conflicting data from submitters
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 copy number gain See cases [RCV000138783] Chr9:193412..138124524 [GRCh38]
Chr9:204090..141018976 [GRCh37]
Chr9:194090..140138797 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q21.11(chr9:204104-67549861)x3 copy number gain See cases [RCV000139208] Chr9:204104..67549861 [GRCh38]
Chr9:204104..66516698 [GRCh37]
Chr9:194104..66256518 [NCBI36]
Chr9:9p24.3-q21.11
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:204104-38768294)x3 copy number gain See cases [RCV000139126] Chr9:204104..38768294 [GRCh38]
Chr9:204104..38768291 [GRCh37]
Chr9:194104..38758291 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000138962] Chr9:193412..138159073 [GRCh38]
Chr9:204104..141053525 [GRCh37]
Chr9:194104..140173346 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic|conflicting data from submitters
GRCh38/hg38 9p22.2-q21.11(chr9:18344605-68257015) copy number gain See cases [RCV000140448] Chr9:18344605..68257015 [GRCh38]
Chr9:18344603..68995221 [GRCh37]
Chr9:18334603..68285041 [NCBI36]
Chr9:9p22.2-q21.11
pathogenic
GRCh38/hg38 9p24.3-q22.1(chr9:203861-88130444)x4 copy number gain See cases [RCV000141904] Chr9:203861..88130444 [GRCh38]
Chr9:203861..90745359 [GRCh37]
Chr9:193861..89935179 [NCBI36]
Chr9:9p24.3-q22.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 copy number gain See cases [RCV000141876] Chr9:203861..138125937 [GRCh38]
Chr9:203861..141020389 [GRCh37]
Chr9:193861..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p21.1-q21.11(chr9:31426827-68257015)x3 copy number gain See cases [RCV000141663] Chr9:31426827..68257015 [GRCh38]
Chr9:31426825..68330127 [GRCh37]
Chr9:31416825..67819947 [NCBI36]
Chr9:9p21.1-q21.11
pathogenic
GRCh38/hg38 9p21.1-13.1(chr9:28975663-38787483)x3 copy number gain See cases [RCV000142317] Chr9:28975663..38787483 [GRCh38]
Chr9:28975661..38787480 [GRCh37]
Chr9:28965661..38777480 [NCBI36]
Chr9:9p21.1-13.1
likely pathogenic
GRCh38/hg38 9p24.3-q21.31(chr9:193412-79877816)x3 copy number gain See cases [RCV000143012] Chr9:193412..79877816 [GRCh38]
Chr9:204104..82492731 [GRCh37]
Chr9:194104..81682551 [NCBI36]
Chr9:9p24.3-q21.31
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:203861-38381642) copy number gain See cases [RCV000143411] Chr9:203861..38381642 [GRCh38]
Chr9:203861..38381639 [GRCh37]
Chr9:193861..38371639 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 copy number gain See cases [RCV000143476] Chr9:203862..138125937 [GRCh38]
Chr9:203862..141020389 [GRCh37]
Chr9:193862..140140210 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 copy number gain See cases [RCV000148113] Chr9:193412..138179445 [GRCh38]
Chr9:204193..141073897 [GRCh37]
Chr9:194193..140193718 [NCBI36]
Chr9:9p24.3-q34.3
pathogenic
GRCh38/hg38 9p24.3-13.1(chr9:204193-38815478)x3 copy number gain See cases [RCV000148159] Chr9:204193..38815478 [GRCh38]
Chr9:204193..38815475 [GRCh37]
Chr9:194193..38805475 [NCBI36]
Chr9:9p24.3-13.1
pathogenic
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 copy number gain See cases [RCV000139207] Chr9:193412..138159073 [GRCh38]
Chr9:68420641..141053525 [GRCh37]
Chr9:67910461..140173346 [NCBI36]
Chr9:9p11.2-q34.3
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:163131-38763958)x3 copy number gain See cases [RCV000240201] Chr9:163131..38763958 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 copy number gain See cases [RCV000240081] Chr9:163131..141122114 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-11.2(chr9:213161-47212321)x4 copy number gain See cases [RCV000240048] Chr9:213161..47212321 [GRCh37]
Chr9:9p24.3-11.2
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:213161-39092820)x3 copy number gain See cases [RCV000239869] Chr9:213161..39092820 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-68188391)x4 copy number gain See cases [RCV000449165] Chr9:203861..68188391 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) copy number gain See cases [RCV000449375] Chr9:62525..141006407 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 copy number gain See cases [RCV000447207] Chr9:203861..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-67983174)x4 copy number gain See cases [RCV000446521] Chr9:203861..67983174 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:32396-39140211) copy number gain See cases [RCV000447246] Chr9:32396..39140211 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:13997-70919878)x4 copy number gain See cases [RCV000448242] Chr9:13997..70919878 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:203861-69002883)x3 copy number gain See cases [RCV000448569] Chr9:203861..69002883 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 copy number gain See cases [RCV000448978] Chr9:203864..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:203861-38787480)x3 copy number gain See cases [RCV000510864] Chr9:203861..38787480 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-11.2(chr9:204193-44259464)x4 copy number gain Syndromic hydrocephalus due to diffuse villous hyperplasia of choroid plexus [RCV000677299] Chr9:204193..44259464 [GRCh37]
Chr9:9p24.3-11.2
likely pathogenic
GRCh37/hg19 9p24.3-q21.33(chr9:203861-88189913)x3 copy number gain See cases [RCV000512431] Chr9:203861..88189913 [GRCh37]
Chr9:9p24.3-q21.33
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) copy number gain See cases [RCV000512392] Chr9:203862..141020389 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-67983174)x4 copy number gain not provided [RCV000683173] Chr9:203861..67983174 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:203861-38787480)x3 copy number gain not provided [RCV000683172] Chr9:203861..38787480 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:203861-70985795)x4 copy number gain not provided [RCV000683175] Chr9:203861..70985795 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-68262804)x3,4 copy number gain not provided [RCV000683174] Chr9:203861..68262804 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-q21.12(chr9:203861-72717793)x3 copy number gain not provided [RCV000683176] Chr9:203861..72717793 [GRCh37]
Chr9:9p24.3-q21.12
pathogenic
NC_000009.11:g.(?_34645556)_(36277059_?)dup duplication Anauxetic dysplasia [RCV000708053] Chr9:34645559..36277062 [GRCh38]
Chr9:34645556..36277059 [GRCh37]
Chr9:9p13.3
uncertain significance
NC_000009.11:g.(?_34458984)_(36277059_?)dup duplication Distal spinal muscular atrophy, autosomal recessive 2 [RCV000708492] Chr9:34458984..36277059 [GRCh37]
Chr9:9p13.3
uncertain significance
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 copy number gain not provided [RCV000748055] Chr9:10590..141122247 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 copy number gain not provided [RCV000748053] Chr9:10590..141107672 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 copy number gain not provided [RCV000748063] Chr9:46587..141066491 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 copy number gain not provided [RCV000748054] Chr9:10590..141114095 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
Single allele complex Glioma [RCV000754871] Chr9:23524426..87359888 [GRCh37]
Chr9:9p21.3-q21.33
likely pathogenic
NM_001833.4(CLTA):c.387G>A (p.Arg129=) single nucleotide variant not provided [RCV000970710] Chr9:36204081 [GRCh38]
Chr9:36204078 [GRCh37]
Chr9:9p13.3
benign
GRCh37/hg19 9p24.3-13.1(chr9:214309-39156958) copy number gain not provided [RCV000767644] Chr9:214309..39156958 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 copy number gain not provided [RCV000845900] Chr9:203861..141020388 [GRCh37]
Chr9:9p24.3-q34.3
pathogenic
GRCh37/hg19 9p13.3-q13(chr9:34542635-68210033)x3 copy number gain not provided [RCV000849826] Chr9:34542635..68210033 [GRCh37]
Chr9:9p13.3-q13
pathogenic
GRCh37/hg19 9p24.3-q13(chr9:203861-67986965)x3 copy number gain not provided [RCV000845815] Chr9:203861..67986965 [GRCh37]
Chr9:9p24.3-q13
pathogenic
GRCh37/hg19 9p24.3-13.1(chr9:203861-38472979)x3 copy number gain not provided [RCV000848175] Chr9:203861..38472979 [GRCh37]
Chr9:9p24.3-13.1
pathogenic
GRCh37/hg19 9p24.3-q21.11(chr9:203861-70984588)x3 copy number gain not provided [RCV001006167] Chr9:203861..70984588 [GRCh37]
Chr9:9p24.3-q21.11
pathogenic
NM_001833.4(CLTA):c.256-6G>A single nucleotide variant not provided [RCV000975212] Chr9:36198973 [GRCh38]
Chr9:36198970 [GRCh37]
Chr9:9p13.3
benign
GRCh37/hg19 9p21.1-13.2(chr9:32192406-38311776)x3 copy number gain not provided [RCV001259519] Chr9:32192406..38311776 [GRCh37]
Chr9:9p21.1-13.2
likely pathogenic
NC_000009.11:g.(?_35683146)_(36277049_?)dup duplication Distal arthrogryposis type 1A [RCV001345686] Chr9:35683146..36277049 [GRCh37]
Chr9:9p13.3
uncertain significance

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:2090 AgrOrtholog
COSMIC CLTA COSMIC
Ensembl Genes ENSG00000122705 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSP00000242284 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000242285 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000379848 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000401019 UniProtKB/Swiss-Prot
  ENSP00000417698 ENTREZGENE, UniProtKB/TrEMBL
  ENSP00000419158 UniProtKB/TrEMBL
  ENSP00000419746 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000437508 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSP00000442869 UniProtKB/Swiss-Prot
  ENSP00000474266 UniProtKB/TrEMBL
Ensembl Transcript ENST00000242285 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000345519 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000396603 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000433436 UniProtKB/Swiss-Prot
  ENST00000464497 UniProtKB/TrEMBL
  ENST00000466396 ENTREZGENE, UniProtKB/TrEMBL
  ENST00000470744 ENTREZGENE, UniProtKB/Swiss-Prot
  ENST00000493185 UniProtKB/TrEMBL
  ENST00000538225 UniProtKB/Swiss-Prot
  ENST00000540080 ENTREZGENE, UniProtKB/Swiss-Prot
GTEx ENSG00000122705 GTEx
HGNC ID HGNC:2090 ENTREZGENE
Human Proteome Map CLTA Human Proteome Map
InterPro Clathrin_L-chain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:1211 UniProtKB/Swiss-Prot
NCBI Gene 1211 ENTREZGENE
OMIM 118960 OMIM
PANTHER PTHR10639 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Clathrin_lg_ch UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA26616 PharmGKB
PROSITE CLATHRIN_LIGHT_CHN_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  CLATHRIN_LIGHT_CHN_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt C9J8P9 ENTREZGENE, UniProtKB/TrEMBL
  CLCA_HUMAN UniProtKB/Swiss-Prot
  F8WF69_HUMAN UniProtKB/TrEMBL
  P09496 ENTREZGENE
  S4R3F6_HUMAN UniProtKB/TrEMBL
UniProt Secondary A8K4W3 UniProtKB/Swiss-Prot
  B4DIN1 UniProtKB/Swiss-Prot
  F5H6N3 UniProtKB/Swiss-Prot
  Q2XPN5 UniProtKB/Swiss-Prot
  Q53XZ1 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-01-26 CLTA  clathrin light chain A    clathrin, light chain A  Symbol and/or name change 5135510 APPROVED
2011-08-17 CLTA  clathrin, light chain A  CLTA  clathrin, light chain A  Symbol and/or name change 5135510 APPROVED
2011-07-27 CLTA  clathrin, light chain A  CLTA  clathrin, light chain (Lca)  Symbol and/or name change 5135510 APPROVED