Unc5b (unc-5 netrin receptor B) - Rat Genome Database

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Gene: Unc5b (unc-5 netrin receptor B) Mus musculus
Analyze
Symbol: Unc5b
Name: unc-5 netrin receptor B
RGD ID: 733680
MGI Page MGI
Description: Predicted to have netrin receptor activity. Involved in anterior/posterior axon guidance. Predicted to localize to membrane raft. Is expressed in several structures, including brain; ganglia; limb; lung; and sensory organ. Orthologous to human UNC5B (unc-5 netrin receptor B); INTERACTS WITH 1,1-dichloroethene; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 6330415E02Rik; A630020F16; D10Bwg0792e; netrin receptor UNC5B; unc-5 homolog 2; unc-5 homolog B; unc5 homolog 2; Unc5h; Unc5h2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391060,598,373 - 60,667,360 (-)NCBIGRCm39mm39
GRCm39 Ensembl1060,598,372 - 60,667,360 (-)Ensembl
GRCm381060,762,594 - 60,831,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1060,762,593 - 60,831,581 (-)EnsemblGRCm38mm10GRCm38
MGSCv371060,225,343 - 60,294,329 (-)NCBIGRCm37mm9NCBIm37
MGSCv361060,157,952 - 60,226,938 (-)NCBImm8
Celera1061,863,405 - 61,932,538 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1031.52NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(S)-nicotine  (ISO)
1,1-dichloroethene  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP,ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
8-Br-cAMP  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
aflatoxin B2  (ISO)
all-trans-retinoic acid  (EXP)
ammonium chloride  (ISO)
amphetamine  (ISO)
arsane  (ISO)
arsenic atom  (ISO)
atrazine  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
benzo[e]pyrene  (ISO)
Benzo[k]fluoranthene  (EXP)
bis(2-ethylhexyl) phthalate  (EXP,ISO)
bisphenol A  (ISO)
bisphenol F  (EXP)
butanal  (ISO)
Butylparaben  (ISO)
carbamazepine  (ISO)
choline  (EXP)
clofibric acid  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
decabromodiphenyl ether  (ISO)
dexamethasone  (ISO)
dibutyl phthalate  (ISO)
dichlorine  (ISO)
dichloroacetic acid  (EXP)
dieldrin  (ISO)
disodium selenite  (ISO)
dorsomorphin  (ISO)
elemental selenium  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
enzacamene  (ISO)
epoxiconazole  (ISO)
ethanol  (ISO)
fenvalerate  (ISO)
folic acid  (EXP)
formaldehyde  (ISO)
furan  (ISO)
hydrogen peroxide  (ISO)
hydroquinone  (ISO)
indole-3-methanol  (ISO)
isotretinoin  (ISO)
L-methionine  (EXP)
linuron  (ISO)
methapyrilene  (ISO)
methylmercury chloride  (ISO)
N-methyl-4-phenylpyridinium  (ISO)
nicotine  (ISO)
orphenadrine  (ISO)
oxaliplatin  (ISO)
ozone  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctanoic acid  (ISO)
phenethyl isothiocyanate  (ISO)
phenobarbital  (ISO)
pirinixic acid  (EXP)
prochloraz  (ISO)
procymidone  (ISO)
propanal  (ISO)
rimonabant  (EXP)
rotenone  (ISO)
SB 431542  (ISO)
selenium atom  (ISO)
silicon dioxide  (ISO)
sunitinib  (ISO)
Tesaglitazar  (ISO)
tetrachloromethane  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
topotecan  (ISO)
trichloroethene  (EXP)
triclosan  (ISO)
triptonide  (EXP)
troglitazone  (EXP,ISO)
urethane  (ISO)
valproic acid  (ISO)
vinclozolin  (ISO)
zinc dichloride  (ISO)

References

Additional References at PubMed
PMID:7903102   PMID:8889548   PMID:10341242   PMID:10349636   PMID:10704383   PMID:10908620   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11387206   PMID:12351186   PMID:12477932  
PMID:12736344   PMID:12799072   PMID:12904583   PMID:14610273   PMID:15186747   PMID:15489334   PMID:15510105   PMID:15729359   PMID:16141072   PMID:16141073   PMID:16284245   PMID:16510500  
PMID:16602821   PMID:16809490   PMID:16829211   PMID:17139086   PMID:17296941   PMID:17543537   PMID:17616930   PMID:17908930   PMID:18223200   PMID:18287559   PMID:18469807   PMID:18479186  
PMID:18480165   PMID:18719102   PMID:19004851   PMID:19211685   PMID:19386270   PMID:20628609   PMID:20693423   PMID:21172653   PMID:21238923   PMID:21267068   PMID:21460185   PMID:21673655  
PMID:21873635   PMID:22076636   PMID:22726835   PMID:22848430   PMID:23299940   PMID:23307742   PMID:23312517   PMID:23457482   PMID:23936025   PMID:24115477   PMID:24584118   PMID:24720832  
PMID:24952961   PMID:25264302   PMID:25374360   PMID:25896231   PMID:26039999   PMID:26397040   PMID:26633812   PMID:26633881   PMID:26659141   PMID:26687222   PMID:26792178   PMID:26859457  
PMID:27502509   PMID:27910960   PMID:28576770   PMID:29449449   PMID:30645777   PMID:31351040   PMID:32231305   PMID:32404521   PMID:32562661   PMID:32929029  


Genomics

Comparative Map Data
Unc5b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391060,598,373 - 60,667,360 (-)NCBIGRCm39mm39
GRCm39 Ensembl1060,598,372 - 60,667,360 (-)Ensembl
GRCm381060,762,594 - 60,831,581 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1060,762,593 - 60,831,581 (-)EnsemblGRCm38mm10GRCm38
MGSCv371060,225,343 - 60,294,329 (-)NCBIGRCm37mm9NCBIm37
MGSCv361060,157,952 - 60,226,938 (-)NCBImm8
Celera1061,863,405 - 61,932,538 (-)NCBICelera
Cytogenetic Map10B4NCBI
cM Map1031.52NCBI
UNC5B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1071,212,570 - 71,302,864 (+)EnsemblGRCh38hg38GRCh38
GRCh381071,212,535 - 71,302,879 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371072,972,327 - 73,062,621 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361072,642,353 - 72,729,722 (+)NCBINCBI36hg18NCBI36
Build 341072,642,354 - 72,729,714NCBI
Celera1066,254,788 - 66,343,547 (+)NCBI
Cytogenetic Map10q22.1NCBI
HuRef1066,966,129 - 67,056,670 (+)NCBIHuRef
CHM1_11073,254,992 - 73,345,299 (+)NCBICHM1_1
Unc5b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.22028,697,726 - 28,764,474 (-)NCBI
Rnor_6.0 Ensembl2030,339,673 - 30,406,295 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.02030,339,680 - 30,406,593 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.02032,148,315 - 32,215,391 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42028,095,243 - 28,162,204 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.12028,109,042 - 28,176,004 (-)NCBI
Celera2030,138,282 - 30,201,182 (-)NCBICelera
Cytogenetic Map20q11NCBI
Unc5b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495543720,120,946 - 20,199,877 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495543720,120,996 - 20,199,877 (-)NCBIChiLan1.0ChiLan1.0
UNC5B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11070,207,998 - 70,298,038 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1070,207,998 - 70,298,038 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01067,682,415 - 67,772,760 (+)NCBIMhudiblu_PPA_v0panPan3
UNC5B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1422,003,131 - 22,084,107 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl422,003,131 - 22,081,744 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha422,139,026 - 22,219,691 (+)NCBI
ROS_Cfam_1.0422,280,582 - 22,358,557 (+)NCBI
UMICH_Zoey_3.1422,178,248 - 22,258,859 (+)NCBI
UNSW_CanFamBas_1.0422,383,898 - 22,464,744 (+)NCBI
UU_Cfam_GSD_1.0422,736,647 - 22,817,352 (+)NCBI
Unc5b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440721358,980,118 - 59,055,010 (-)NCBI
SpeTri2.0NW_0049365217,472,788 - 7,547,408 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
UNC5B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1474,120,050 - 74,205,273 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11474,120,055 - 74,208,055 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21480,011,267 - 80,098,887 (+)NCBISscrofa10.2Sscrofa10.2susScr3
UNC5B
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1959,995,997 - 60,086,663 (-)NCBI
Unc5b
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247545,204,875 - 5,280,479 (+)NCBI

Position Markers
RH125085  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381060,762,717 - 60,762,909UniSTSGRCm38
MGSCv371060,225,465 - 60,225,657UniSTSGRCm37
Celera1061,863,527 - 61,863,719UniSTS
Cytogenetic Map10B4UniSTS
cM Map1032.0UniSTS
Unc5h2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381060,772,511 - 60,772,534UniSTSGRCm38
MGSCv371060,235,259 - 60,235,282UniSTSGRCm37
Celera1061,873,321 - 61,873,344UniSTS
Cytogenetic Map10B4UniSTS
cM Map10 UniSTS
Unc5b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381060,764,861 - 60,765,300UniSTSGRCm38
MGSCv371060,227,609 - 60,228,048UniSTSGRCm37
Celera1061,865,671 - 61,866,110UniSTS
Cytogenetic Map10B4UniSTS
cM Map1032.0UniSTS
D10Bwg0792e  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381060,762,739 - 60,762,905UniSTSGRCm38
MGSCv371060,225,487 - 60,225,653UniSTSGRCm37
Celera1061,863,549 - 61,863,715UniSTS
Cytogenetic Map10B4UniSTS
cM Map1032.0UniSTS
Unc5b  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381060,762,826 - 60,762,896UniSTSGRCm38
MGSCv371060,225,574 - 60,225,644UniSTSGRCm37
Celera1061,863,636 - 61,863,706UniSTS
Cytogenetic Map10B4UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357740Obsty3_mobesity 3 (mouse)Not determined108359714116355075Mouse
1301386Sysbp1_msystolic blood pressure 1 (mouse)Not determined101023252187565233Mouse
1357825Kidpq2_mkidney weight percentage QTL 2 (mouse)Not determined101282830784243920Mouse
1357656Hrtq3_mheart weight QTL 3 (mouse)Not determined101282830784243920Mouse
1357864Scfpq1_msubcutaneous fat pad percentage QTL 1 (mouse)Not determined101282830784243920Mouse
1357893Lvrq4_mliver weight QTL 4 (mouse)Not determined101282830784243920Mouse
4142380W3q11_mweight 3 weeks QTL 11 (mouse)Not determined1282830784243920Mouse
4141943W6q6_mweight 6 weeks QTL 6 (mouse)Not determined1282830784243920Mouse
4141956Egq7_mearly growth QTL 7 (mouse)Not determined1282830784243920Mouse
4142272W10q5_mweight 10 weeks QTL 5 (mouse)Not determined1282830784243920Mouse
39128215Lwq17_mliver weight QTL 17 (mouse)101282830784243920Mouse
1302067Scc9_mcolon tumor susceptibility 9 (mouse)Not determined1018383585125739363Mouse
27226772Tibl13_mtibia length 13, 10 week (mouse)1019000000129800000Mouse
1558757Eae34_mexperimental allergic encephalomyelitis susceptibility 34 (mouse)Not determined1021532255114381325Mouse
1301003Lmblgq4_mlimb length QTL 4 (mouse)Not determined102171529368255809Mouse
26884403Cvht8_mcranial vault height 8, 16 week (mouse)102300000091200000Mouse
26884426Cvht1_mcranial vault height 1, 5 week (mouse)1024800000121200000Mouse
1300898Cfid_mcystic fibrosis intestinal distress (mouse)Not determined102984430763844387Mouse
10045632Heal16_mwound healing/regeneration 16 (mouse)Not determined103109840365098534Mouse
1357558Bmch4_mbone mechanical trait 4 (mouse)Not determined103170104065701188Mouse
27095920Pglq9_mpelvic girdle length QTL 9, 10 week (mouse)103390000071000000Mouse
27095911Pglq15_mpelvic girdle length QTL 15, 16 week (mouse)1039300000129800000Mouse
27226764Tibl19_mtibia length 19, 16 week (mouse)1039300000129800000Mouse
4141070Ltgq1_mliver triglyceride QTL 1 (mouse)Not determined4140150475401504Mouse
26884411Bzwq8_mbi-zygomatic width QTL 8, 10 week (mouse)1045000000116100000Mouse
26884407Bzwq14_mbi-zygomatic width QTL 14, 16 wee (mouse)1045600000120800000Mouse
26884421Cvht5_mcranial vault height 5, 10 week (mouse)104570000069300000Mouse
26884400Huml5_mhumerus length 5, 16 week (mouse)104640000069400000Mouse
4142313Angvq1_mangiogenesis by VEGF QTL 1 (mouse)Not determined4684430782655287Mouse
4141159Phl2_mprogressive hearing loss 2 (mouse)Not determined104809840370276821Mouse
1302150Bbaa18_mB.burgdorferi-associated arthritis 18 (mouse)Not determined104950223383502378Mouse
4142169Pbwg16_mpostnatal body weight growth 16 (mouse)Not determined105001240884012633Mouse
1300597Skull14_mskull morphology 14 (mouse)Not determined105001240884012633Mouse
10045641Jckm3_mjuvenile cystic kidney modifier 3 (mouse)Not determined105001240884012633Mouse
1301966Lifespan2_mlife span 2 (mouse)Not determined105001244384012618Mouse
1357737Hpcr2_mhepatocarcinogen resistance 2 (mouse)Not determined105001244384012618Mouse
1300882Ath17_matherosclerosis 17 (mouse)Not determined105125566085255809Mouse
1301502Eae17_msusceptibility to experimental allergic encephalomyelitis 17 (mouse)Not determined105125566085255809Mouse
1301380Cia8_mcollagen induced arthritis QTL 8 (mouse)Not determined105161730482655287Mouse
14746991Manh68_mmandible shape 68 (mouse)105244466786444667Mouse
12904011Cfq11_mconditioned fear QTL 11 (mouse)105660406061105062Mouse
1301787Bsc1_mbrain size control 1 (mouse)Not determined105868113592681262Mouse
26884450Sklq15_mskull length QTL 15, 16 week (mouse)1059500000122500000Mouse
13208560Wght9_mweight 9 (mouse)1060000000121000000Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1319
Count of miRNA genes:601
Interacting mature miRNAs:763
Transcripts:ENSMUST00000077925
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001359273 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_029770 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC153517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ487853 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK018177 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK041547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147603 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154271 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154287 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK158284 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK159205 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK170513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AW488068 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC048162 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC057560 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY521726 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY529391 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466553 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000077925   ⟹   ENSMUSP00000077080
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1060,762,593 - 60,831,581 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218316
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1060,762,610 - 60,820,641 (-)Ensembl
RefSeq Acc Id: ENSMUST00000218637   ⟹   ENSMUSP00000151251
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1060,764,577 - 60,831,382 (-)Ensembl
RefSeq Acc Id: NM_001359273   ⟹   NP_001346202
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391060,598,373 - 60,667,360 (-)NCBI
GRCm381060,762,594 - 60,831,581 (-)NCBI
Sequence:
RefSeq Acc Id: NM_029770   ⟹   NP_084046
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391060,598,373 - 60,667,360 (-)NCBI
GRCm381060,762,594 - 60,831,581 (-)NCBI
MGSCv371060,225,343 - 60,294,329 (-)RGD
Celera1061,863,405 - 61,932,538 (-)RGD
cM Map10 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_084046   ⟸   NM_029770
- Peptide Label: isoform 1 precursor
- UniProtKB: Q8K1S3 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001346202   ⟸   NM_001359273
- Peptide Label: isoform 2 precursor
RefSeq Acc Id: ENSMUSP00000151251   ⟸   ENSMUST00000218637
RefSeq Acc Id: ENSMUSP00000077080   ⟸   ENSMUST00000077925
Protein Domains
Death   Ig-like   Ig-like C2-type   TSP type-1   ZU5

Promoters
RGD ID:6820073
Promoter ID:MM_KWN:4246
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   MEF_B6
Transcripts:UC007FFD.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361060,283,069 - 60,283,569 (-)MPROMDB
RGD ID:6820074
Promoter ID:MM_KWN:4247
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6
Transcripts:NM_029770,   UC007FFF.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361060,293,976 - 60,294,476 (-)MPROMDB
RGD ID:8672070
Promoter ID:EPDNEW_M14066
Type:multiple initiation site
Name:Unc5b_1
Description:Mus musculus unc-5 netrin receptor B , transcript variant 2,mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381060,831,581 - 60,831,641EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:894703 AgrOrtholog
Ensembl Genes ENSMUSG00000020099 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000077080 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000151251 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000077925 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000218637 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 2.20.100.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro DEATH-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Death_UNC5B UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_sub2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1_rpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1_rpt_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UNC5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:107449 UniProtKB/Swiss-Prot
MGD MGI:894703 ENTREZGENE
NCBI Gene 107449 ENTREZGENE
PANTHER PTHR12582 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Death UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  I-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  UPA UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Unc5b PhenoGen
PROSITE DEATH_DOMAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IG_LIKE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART DEATH UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  IGc2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SM00409 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  TSP1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ZU5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF47986 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF48726 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF82895 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt Q3TCV5_MOUSE UniProtKB/TrEMBL
  Q3TYW6_MOUSE UniProtKB/TrEMBL
  Q3UH38_MOUSE UniProtKB/TrEMBL
  Q8K1S3 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3U4F2 UniProtKB/Swiss-Prot
  Q6PFH0 UniProtKB/Swiss-Prot
  Q80Y85 UniProtKB/Swiss-Prot
  Q9D398 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-03-14 Unc5b  unc-5 netrin receptor B    unc-5 homolog B (C. elegans)  Symbol and/or name change 5135510 APPROVED