Tecr (trans-2,3-enoyl-CoA reductase) - Rat Genome Database
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Gene: Tecr (trans-2,3-enoyl-CoA reductase) Mus musculus
Analyze
Symbol: Tecr
Name: trans-2,3-enoyl-CoA reductase
RGD ID: 733591
MGI Page MGI
Description: Predicted to have very-long-chain enoyl-CoA reductase activity. Predicted to be involved in fatty acid elongation; sphingolipid metabolic process; and very long-chain fatty acid biosynthetic process. Predicted to localize to endoplasmic reticulum and integral component of endoplasmic reticulum membrane. Is expressed in several structures, including alimentary system; nervous system; respiratory system; sensory organ; and skeleton. Human ortholog(s) of this gene implicated in autosomal recessive non-syndromic intellectual disability. Orthologous to human TECR (trans-2,3-enoyl-CoA reductase); INTERACTS WITH 1,2-dimethylhydrazine; 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 2410016D23Rik; A230102P12Rik; AI173355; D17Ertd178; D17Ertd178e; glycoprotein, synaptic 2; Gp; Gpsn2; MGC144249; SC; SC2; synaptic glycoprotein SC2; TER; very-long-chain enoyl-CoA reductase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: Gm4948  
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,298,327 - 84,321,120 (-)NCBIGRCm39mm39
GRCm38883,571,698 - 83,594,491 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,571,698 - 83,607,971 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,095,597 - 86,118,390 (-)NCBIGRCm37mm9NCBIm37
MGSCv36886,461,805 - 86,484,570 (-)NCBImm8
Celera887,857,633 - 87,880,363 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:12477932   PMID:12482854   PMID:12520002   PMID:12904583   PMID:14610273   PMID:14681479   PMID:15489334  
PMID:15782199   PMID:16141072   PMID:16141073   PMID:16341590   PMID:16916647   PMID:18799693   PMID:19164599   PMID:21267068   PMID:21677750   PMID:21873635   PMID:24457600   PMID:26238476  
PMID:28378742   PMID:30196744   PMID:30498063   PMID:32325033   PMID:32581705   PMID:32968282  


Genomics

Comparative Map Data
Tecr
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39884,298,327 - 84,321,120 (-)NCBIGRCm39mm39
GRCm38883,571,698 - 83,594,491 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl883,571,698 - 83,607,971 (-)EnsemblGRCm38mm10GRCm38
MGSCv37886,095,597 - 86,118,390 (-)NCBIGRCm37mm9NCBIm37
MGSCv36886,461,805 - 86,484,570 (-)NCBImm8
Celera887,857,633 - 87,880,363 (-)NCBICelera
Cytogenetic Map8C2NCBI
cM Map840.22NCBI
TECR
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl1914,517,085 - 14,565,980 (+)EnsemblGRCh38hg38GRCh38
GRCh381914,527,752 - 14,565,980 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh371914,640,379 - 14,676,792 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,501,382 - 14,537,792 (+)NCBINCBI36hg18NCBI36
Build 341914,501,381 - 14,537,791NCBI
Celera485,160,139 - 85,188,395 (-)NCBI
Cytogenetic Map19p13.12NCBI
HuRef1914,210,172 - 14,246,278 (+)NCBIHuRef
CHM1_11914,640,332 - 14,677,621 (+)NCBICHM1_1
Tecr
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.01924,705,478 - 24,732,024 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1924,705,481 - 24,732,024 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01935,684,508 - 35,711,344 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41926,232,602 - 26,259,289 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.11926,237,427 - 26,264,112 (+)NCBI
Celera1924,083,400 - 24,108,790 (+)NCBICelera
Cytogenetic Map19q11NCBI
Tecr
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541533,135,646 - 33,143,145 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541533,112,098 - 33,138,810 (+)NCBIChiLan1.0ChiLan1.0
TECR
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.11914,936,911 - 14,972,784 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1914,936,911 - 14,972,784 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v01914,092,967 - 14,129,025 (+)NCBIMhudiblu_PPA_v0panPan3
TECR
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 Ensembl2048,094,961 - 48,120,291 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.12048,094,891 - 48,120,384 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Tecr
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049366593,051,657 - 3,080,948 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
TECR
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1264,723,698 - 64,752,209 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2265,189,388 - 65,191,199 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TECR
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,186,972 - 13,224,908 (+)NCBI
ChlSab1.1 Ensembl613,188,450 - 13,227,776 (+)Ensembl
Tecr
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046249011,643,465 - 1,668,544 (+)NCBI

Position Markers
AI173355  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,572,250 - 83,572,443UniSTSGRCm38
GRCm381773,870,623 - 73,870,735UniSTSGRCm38
MGSCv37886,096,149 - 86,096,342UniSTSGRCm37
MGSCv371774,219,963 - 74,220,075UniSTSGRCm37
Celera1778,161,748 - 78,161,860UniSTS
Celera887,858,185 - 87,858,389UniSTS
Cytogenetic Map17E2UniSTS
Cytogenetic Map8C3UniSTS
cM Map843.5UniSTS
RH126374  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381773,870,331 - 73,870,581UniSTSGRCm38
GRCm38883,571,708 - 83,572,035UniSTSGRCm38
MGSCv37886,095,607 - 86,095,934UniSTSGRCm37
MGSCv371774,219,671 - 74,219,921UniSTSGRCm37
Celera1778,161,456 - 78,161,706UniSTS
Celera887,857,643 - 87,857,970UniSTS
Cytogenetic Map8C3UniSTS
Cytogenetic Map17E2UniSTS
cM Map1743.5UniSTS
cM Map17 UniSTS
cM Map843.5UniSTS
RH139870  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,572,706 - 83,573,077UniSTSGRCm38
MGSCv37886,096,605 - 86,096,976UniSTSGRCm37
Celera887,858,652 - 87,859,023UniSTS
Cytogenetic Map8C3UniSTS
cM Map843.5UniSTS
BI282960  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,572,259 - 83,572,726UniSTSGRCm38
MGSCv37886,096,158 - 86,096,625UniSTSGRCm37
Celera887,858,194 - 87,858,672UniSTS
Cytogenetic Map8C3UniSTS
cM Map843.5UniSTS
Gpsn2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38883,571,846 - 83,572,301UniSTSGRCm38
MGSCv37886,095,745 - 86,096,200UniSTSGRCm37
Celera887,857,781 - 87,858,236UniSTS
Cytogenetic Map8C3UniSTS
cM Map843.5UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4140967Bmd39_mbone mineral density 39 (mouse)Not determined832016544117238700Mouse
1558875Eae31_mexperimental allergic encephalomyelitis susceptibility 31 (mouse)Not determined834642776114837007Mouse
1301013Capsq4_mcapsaicin sensitivity related QTL 4 (mouse)Not determined83616300092728652Mouse
27226754Femd6_mfemur midshaft diameter 6, 10 week (mouse)837400000109600000Mouse
12904744Carcdq1_mcardiac collagen deposition QTL 1 (mouse)83970925694689598Mouse
14746987Manh64_mmandible shape 64 (mouse)85005330684053306Mouse
14747005Mancz7_mmandible centroid size 7 (mouse)85005330684053306Mouse
14700686Civq3_mcerebral infarct volume QTL 3 (mouse)85188219185882191Mouse
1301506Aevm1_mautoimmune extremity vasculitis in MRL mice 1 (mouse)Not determined85428781788287993Mouse
1301952Im3_mimmunoregulatory 3 (mouse)Not determined85470661488706763Mouse
10412287Carg3_mCandida albicans resistance gene 3 (mouse)Not determined85554502889545028Mouse
11353828Gf7_mgonadal fat pad weight 7 (mouse)85820147992201479Mouse
10043975Obq31_mobesity QTL 31 (mouse)Not determined85840977692409776Mouse
1301688Orch6_mautoimmune orchitis resistance 6 (mouse)Not determined86078685094786976Mouse
4141285Tgq18_mtriglyceride QTL 18 (mouse)Not determined6346010797460107Mouse
4141797Skmw16_mskeletal muscle weight 16 (mouse)Not determined86393954797939696Mouse
1357787Vtbt5_mvertebral trabecular bone trait 5 (mouse)Not determined86535776899357920Mouse
10043992Hbnr11_mHeligmosomoides bakeri nematode resistance 11 (mouse)Not determined86560020799600347Mouse
1301767Fcsa2_mfemoral cross-sectional area 2 (mouse)Not determined870305375104305495Mouse
4142283Imraq2_mimmune response to AAV2 QTL 2 (mouse)Not determined870305375104305495Mouse
1558780Idd22_minsulin dependent diabetes susceptibility 22 (mouse)Not determined871102903105103009Mouse
4141395Char2a_mP. chabaudi malaria resistance QTL 2a (mouse)Not determined7113678390202598Mouse
4142023W3q5_mweight 3 weeks QTL 5 (mouse)Not determined71287817123895615Mouse
1357708Orq1_movulation rate QTL 1 (mouse)Not determined871287817123895615Mouse
1301872Cd4ts3_mCD4 T cell subset 3 (mouse)Not determined871396181105396393Mouse
1300920Pitm3_mprion incubation time 3 (mouse)Not determined873202495107202598Mouse
27095912Pglq14_mpelvic girdle length QTL 14, 16 week (mouse)873400000126100000Mouse
1558890Lith18_mlithogenic gene 18 (mouse)Not determined875675517109675623Mouse
1357470Obq16_mobesity QTL 16 (mouse)Not determined875685348109685497Mouse
1301808Nhdlq1_mnon-HDL QTL 1 (mouse)Not determined875685348109685497Mouse
1301874Hdlq16_mHDL QTL 16 (mouse)Not determined875685348109685497Mouse
10412234Nhdlq14_mnon-HDL QTL 14 (mouse)Not determined875685348109685497Mouse
1301099Cbm2_mcerebellum weight 2 (mouse)Not determined878518613112518703Mouse
1301581Char2_mP. chabaudi malaria resistance QTL 2 (mouse)Not determined879082178113082403Mouse
12904012Cfq10_mconditioned fear QTL 10 (mouse)88006677589014359Mouse
10755530Wbc2_mwhite blood cell count 2 (mouse)881092664115092664Mouse
10755519Wbc1_mwhite blood cell count 1 (mouse)881619151115619151Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:578
Count of miRNA genes:181
Interacting mature miRNAs:192
Transcripts:ENSMUST00000019382, ENSMUST00000163837, ENSMUST00000165740
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_027179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_134118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC151992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010513 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK010984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK013558 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK020708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171718 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172506 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK189199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK211768 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC019984 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC094046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC115455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BE994003 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY278351 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000019382   ⟹   ENSMUSP00000019382
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,700 - 83,594,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000163837   ⟹   ENSMUSP00000128329
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,700 - 83,594,429 (-)Ensembl
RefSeq Acc Id: ENSMUST00000165740   ⟹   ENSMUSP00000131389
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,700 - 83,594,484 (-)Ensembl
RefSeq Acc Id: ENSMUST00000211972
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,573,099 - 83,607,971 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212005   ⟹   ENSMUSP00000148498
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,700 - 83,573,253 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212136
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,573,294 - 83,594,465 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,705 - 83,572,611 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212285
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,573,369 - 83,594,487 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212418
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,572,663 - 83,594,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212575
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,572,663 - 83,594,421 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212630   ⟹   ENSMUSP00000148368
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,572,922 - 83,594,477 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212652
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,858 - 83,572,456 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212703   ⟹   ENSMUSP00000148299
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,572,029 - 83,573,252 (-)Ensembl
RefSeq Acc Id: ENSMUST00000212990   ⟹   ENSMUSP00000148721
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,698 - 83,572,940 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238861   ⟹   ENSMUSP00000159114
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,572,682 - 83,574,765 (-)Ensembl
RefSeq Acc Id: ENSMUST00000238997   ⟹   ENSMUSP00000159187
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl883,571,700 - 83,574,842 (-)Ensembl
RefSeq Acc Id: NM_027179   ⟹   NP_081455
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,298,327 - 84,321,120 (-)NCBI
GRCm38883,571,698 - 83,594,491 (-)NCBI
MGSCv37886,095,597 - 86,118,390 (-)RGD
Celera887,857,633 - 87,880,363 (-)RGD
cM Map8 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_134118   ⟹   NP_598879
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39884,298,327 - 84,321,120 (-)NCBI
GRCm38883,571,698 - 83,594,491 (-)NCBI
MGSCv37886,095,597 - 86,118,390 (-)RGD
Celera887,857,633 - 87,880,363 (-)RGD
cM Map8 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_598879   ⟸   NM_134118
- Peptide Label: isoform 1
- UniProtKB: Q9CY27 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_081455   ⟸   NM_027179
- Peptide Label: isoform 2
- UniProtKB: Q9CY27 (UniProtKB/Swiss-Prot),   G3UWE1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000128329   ⟸   ENSMUST00000163837
RefSeq Acc Id: ENSMUSP00000131389   ⟸   ENSMUST00000165740
RefSeq Acc Id: ENSMUSP00000159114   ⟸   ENSMUST00000238861
RefSeq Acc Id: ENSMUSP00000159187   ⟸   ENSMUST00000238997
RefSeq Acc Id: ENSMUSP00000148721   ⟸   ENSMUST00000212990
RefSeq Acc Id: ENSMUSP00000148498   ⟸   ENSMUST00000212005
RefSeq Acc Id: ENSMUSP00000148368   ⟸   ENSMUST00000212630
RefSeq Acc Id: ENSMUSP00000148299   ⟸   ENSMUST00000212703
RefSeq Acc Id: ENSMUSP00000019382   ⟸   ENSMUST00000019382
Protein Domains
S5A_REDUCTASE

Promoters
RGD ID:8667605
Promoter ID:EPDNEW_M11834
Type:initiation region
Name:Tecr_2
Description:Mus musculus trans-2,3-enoyl-CoA reductase , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11835  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,573,236 - 83,573,296EPDNEW
RGD ID:8667607
Promoter ID:EPDNEW_M11835
Type:initiation region
Name:Tecr_1
Description:Mus musculus trans-2,3-enoyl-CoA reductase , transcript variant2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M11834  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38883,594,452 - 83,594,512EPDNEW
RGD ID:6848329
Promoter ID:MM_ACW:48169
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Lung
Transcripts:GPSN2.OSEP07-UNSPLICED,   GPSN2.TSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,095,596 - 86,096,497 (-)MPROMDB
RGD ID:6843297
Promoter ID:MM_KWN:55006
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Kidney,   Liver,   Lung
Transcripts:UC009MKL.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,096,851 - 86,097,352 (-)MPROMDB
RGD ID:6848318
Promoter ID:MM_ACW:48170
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain,   Liver,   Spleen
Transcripts:GPSN2.DSEP07,   GPSN2.ESEP07,   GPSN2.SSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,098,391 - 86,098,891 (-)MPROMDB
RGD ID:6843793
Promoter ID:MM_KWN:55009
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:NM_027179,   NM_134118
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36886,118,031 - 86,118,707 (-)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1915408 AgrOrtholog
Ensembl Genes ENSMUSG00000031708 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000019382 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000128329 UniProtKB/TrEMBL
  ENSMUSP00000131389 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000148299 UniProtKB/TrEMBL
  ENSMUSP00000148368 UniProtKB/TrEMBL
  ENSMUSP00000148498 UniProtKB/TrEMBL
  ENSMUSP00000148721 UniProtKB/TrEMBL
  ENSMUSP00000159114 UniProtKB/TrEMBL
  ENSMUSP00000159187 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000019382 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000163837 UniProtKB/TrEMBL
  ENSMUST00000165740 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000212005 UniProtKB/TrEMBL
  ENSMUST00000212630 UniProtKB/TrEMBL
  ENSMUST00000212703 UniProtKB/TrEMBL
  ENSMUST00000212990 UniProtKB/TrEMBL
  ENSMUST00000238861 UniProtKB/TrEMBL
  ENSMUST00000238997 UniProtKB/TrEMBL
InterPro 3-oxo-5_a-steroid_4-DH_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SRD5A/TECR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ubiquitin-like_domsf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:106529 UniProtKB/Swiss-Prot
MGD MGI:1915408 ENTREZGENE
NCBI Gene 106529 ENTREZGENE
PANTHER PTHR10556 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Steroid_dh UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Tecr PhenoGen
PROSITE S5A_REDUCTASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF54236 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniGene Mm.352239 ENTREZGENE
UniProt A0A1D5RLB4_MOUSE UniProtKB/TrEMBL
  A0A1D5RLH3_MOUSE UniProtKB/TrEMBL
  A0A1D5RLT5_MOUSE UniProtKB/TrEMBL
  A0A5F8MPU6_MOUSE UniProtKB/TrEMBL
  A0A5F8MQC8_MOUSE UniProtKB/TrEMBL
  G3UWE1 ENTREZGENE, UniProtKB/TrEMBL
  Q14C44_MOUSE UniProtKB/TrEMBL
  Q3TAN8_MOUSE UniProtKB/TrEMBL
  Q52L67_MOUSE UniProtKB/TrEMBL
  Q9CWN2_MOUSE UniProtKB/TrEMBL
  Q9CY27 ENTREZGENE, UniProtKB/Swiss-Prot