RPL36AL (ribosomal protein L36a like) - Rat Genome Database

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Gene: RPL36AL (ribosomal protein L36a like) Homo sapiens
Analyze
Symbol: RPL36AL
Name: ribosomal protein L36a like
RGD ID: 733562
HGNC Page HGNC:10346
Description: Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to act upstream of or within response to retinoic acid. Located in several cellular components, including cytosol; endoplasmic reticulum; and nucleus.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: 60S ribosomal protein L36a; 60S ribosomal protein L36a-like; large ribosomal subunit protein eL42-like; MGC111574; ribosomal protein eL42-like; ribosomal protein HL44; ribosomal protein L36a; ribosomal protein L36a pseudogene 42; ribosomal protein L36a-like; ribosomal protein L36a-like protein; RPL36A; RPL36A_18_1363; RPL36AP42
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Related Pseudogenes: RPL36AP55  
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381449,618,530 - 49,620,626 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1449,618,530 - 49,620,626 (-)EnsemblGRCh38hg38GRCh38
GRCh371450,085,248 - 50,087,344 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361449,155,156 - 49,157,099 (-)NCBINCBI36Build 36hg18NCBI36
Build 341449,155,158 - 49,157,099NCBI
Celera1429,945,224 - 29,947,167 (-)NCBICelera
Cytogenetic Map14q21.3NCBI
HuRef1430,202,537 - 30,204,534 (-)NCBIHuRef
CHM1_11450,024,410 - 50,026,407 (-)NCBICHM1_1
T2T-CHM13v2.01443,816,754 - 43,818,850 (-)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. GOAs Human GO annotations GOA_HUMAN data from the GO Consortium
2. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
3. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1577483   PMID:3396452   PMID:3542712   PMID:8722009   PMID:8889548   PMID:12477932   PMID:12490704   PMID:15489334   PMID:17207965   PMID:19123937   PMID:21081503   PMID:21182203  
PMID:21182205   PMID:21873635   PMID:21900206   PMID:23246001   PMID:24981860   PMID:25416956   PMID:25468996   PMID:26186194   PMID:26344197   PMID:26465331   PMID:26496610   PMID:26949251  
PMID:27432908   PMID:27684187   PMID:28077445   PMID:28514442   PMID:29117863   PMID:29121065   PMID:29298432   PMID:29509190   PMID:29802200   PMID:29845934   PMID:30209976   PMID:30463901  
PMID:30575818   PMID:30639242   PMID:30997501   PMID:31048545   PMID:31091453   PMID:31182584   PMID:31324722   PMID:31343991   PMID:31527615   PMID:31586073   PMID:31822558   PMID:31871319  
PMID:31980649   PMID:32687490   PMID:32807901   PMID:32908313   PMID:33106477   PMID:33301849   PMID:33644029   PMID:33781803   PMID:33961781   PMID:34133714   PMID:34185411   PMID:34373451  
PMID:34650049   PMID:34857952   PMID:35012549   PMID:35013218   PMID:35140242   PMID:35256949   PMID:35271311   PMID:35384245   PMID:35819319   PMID:35850772   PMID:36215168   PMID:36273042  
PMID:36574265   PMID:36736316   PMID:36762613   PMID:36912080   PMID:37616343   PMID:38113892  


Genomics

Comparative Map Data
RPL36AL
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381449,618,530 - 49,620,626 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1449,618,530 - 49,620,626 (-)EnsemblGRCh38hg38GRCh38
GRCh371450,085,248 - 50,087,344 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361449,155,156 - 49,157,099 (-)NCBINCBI36Build 36hg18NCBI36
Build 341449,155,158 - 49,157,099NCBI
Celera1429,945,224 - 29,947,167 (-)NCBICelera
Cytogenetic Map14q21.3NCBI
HuRef1430,202,537 - 30,204,534 (-)NCBIHuRef
CHM1_11450,024,410 - 50,026,407 (-)NCBICHM1_1
T2T-CHM13v2.01443,816,754 - 43,818,850 (-)NCBIT2T-CHM13v2.0
Rpl36al
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391269,229,508 - 69,230,841 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1269,229,505 - 69,230,857 (-)EnsemblGRCm39 Ensembl
GRCm381269,182,734 - 69,184,067 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1269,182,731 - 69,184,083 (-)EnsemblGRCm38mm10GRCm38
MGSCv371270,283,721 - 70,285,054 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361270,101,346 - 70,102,645 (-)NCBIMGSCv36mm8
Celera1270,274,574 - 70,275,907 (-)NCBICelera
Cytogenetic Map12C2NCBI
cM Map1228.73NCBI
Rpl36al1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8693,390,864 - 93,392,258 (-)NCBIGRCr8
mRatBN7.2687,654,808 - 87,656,202 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1055,343,508 - 55,343,828 (+)EnsemblmRatBN7.2 Ensembl
mRatBN7.2 EnsemblX97,766,179 - 97,768,892 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx688,054,689 - 88,056,086 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0688,354,124 - 88,355,521 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0687,793,875 - 87,795,272 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0181,504,178 - 1,505,581 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1057,251,253 - 57,251,573 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 EnsemblX105,402,867 - 105,405,580 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0 Ensembl181,504,178 - 1,505,570 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.06100,934,129 - 100,935,447 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4691,135,710 - 91,137,104 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1691,139,170 - 91,139,599 (-)NCBI
Celera181,240,307 - 1,240,768 (+)NCBICelera
Cytogenetic Map6q24NCBI
Rpl36al
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495540913,032,499 - 13,033,876 (+)NCBIChiLan1.0ChiLan1.0
RPL36AL
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21550,743,254 - 50,745,261 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11449,959,759 - 49,961,766 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01430,196,924 - 30,198,944 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11448,506,849 - 48,508,844 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1448,506,945 - 48,507,265 (-)Ensemblpanpan1.1panPan2
RPL36AL
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1826,243,619 - 26,244,780 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl826,243,617 - 26,245,386 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha825,997,820 - 25,998,981 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0826,421,914 - 26,423,075 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl826,421,912 - 26,423,557 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1826,077,288 - 26,078,449 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0826,150,913 - 26,152,074 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0826,468,046 - 26,469,207 (-)NCBIUU_Cfam_GSD_1.0
Rpl36al
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864058,287,428 - 58,288,847 (-)NCBIHiC_Itri_2
SpeTri2.0NW_004936583400,117 - 401,489 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RPL36AL
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1179,476,640 - 179,479,147 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11179,476,638 - 179,477,820 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21199,863,013 - 199,864,199 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RPL36AL
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12426,658,516 - 26,660,461 (-)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366605314,974,854 - 14,976,798 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rpl36al
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473119,027,587 - 19,085,171 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473119,082,925 - 19,084,464 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RPL36AL
2 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 14q11.2-32.33(chr14:20151149-106855263)x3 copy number gain See cases [RCV000135543] Chr14:20151149..106855263 [GRCh38]
Chr14:20619308..107263478 [GRCh37]
Chr14:19689148..106334523 [NCBI36]
Chr14:14q11.2-32.33		 pathogenic
GRCh38/hg38 14q21.1-22.3(chr14:39196172-56714461)x3 copy number gain See cases [RCV000140717] Chr14:39196172..56714461 [GRCh38]
Chr14:39665376..57181179 [GRCh37]
Chr14:38735127..56250932 [NCBI36]
Chr14:14q21.1-22.3		 likely pathogenic
GRCh38/hg38 14q11.2-32.33(chr14:20043514-106877229)x3 copy number gain See cases [RCV000143373] Chr14:20043514..106877229 [GRCh38]
Chr14:20511673..107285437 [GRCh37]
Chr14:19581513..106356482 [NCBI36]
Chr14:14q11.2-32.33		 pathogenic
GRCh37/hg19 14q11.2-22.2(chr14:23164384-54733411)x3 copy number gain See cases [RCV000447658] Chr14:23164384..54733411 [GRCh37]
Chr14:14q11.2-22.2		 pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19794561-107234280)x3 copy number gain See cases [RCV000446256] Chr14:19794561..107234280 [GRCh37]
Chr14:14q11.2-32.33		 pathogenic
GRCh37/hg19 14q21.3(chr14:50073908-50127672)x1 copy number loss See cases [RCV000448838] Chr14:50073908..50127672 [GRCh37]
Chr14:14q21.3		 uncertain significance
GRCh37/hg19 14q11.2-32.33(chr14:20511673-107285437) copy number gain See cases [RCV000512041] Chr14:20511673..107285437 [GRCh37]
Chr14:14q11.2-32.33		 pathogenic
GRCh37/hg19 14q11.1-32.33(chr14:19000422-107289053)x3 copy number gain not provided [RCV000738412] Chr14:19000422..107289053 [GRCh37]
Chr14:14q11.1-32.33		 pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19280733-107287663)x3 copy number gain not provided [RCV000738413] Chr14:19280733..107287663 [GRCh37]
Chr14:14q11.2-32.33		 pathogenic
GRCh37/hg19 14q11.2-32.33(chr14:19327823-107287663)x3 copy number gain not provided [RCV000738414] Chr14:19327823..107287663 [GRCh37]
Chr14:14q11.2-32.33		 pathogenic
GRCh37/hg19 14q21.3(chr14:50069088-50199169)x3 copy number gain not provided [RCV000738491] Chr14:50069088..50199169 [GRCh37]
Chr14:14q21.3		 benign
NM_001001.5(RPL36AL):c.-37+32A>G single nucleotide variant not provided [RCV001616887] Chr14:49620530 [GRCh38]
Chr14:50087248 [GRCh37]
Chr14:14q21.3		 benign
GRCh37/hg19 14q21.3(chr14:50073908-50127672) copy number loss not specified [RCV002053102] Chr14:50073908..50127672 [GRCh37]
Chr14:14q21.3		 uncertain significance
GRCh37/hg19 14q21.2-21.3(chr14:45827312-50529931) copy number gain not specified [RCV002053098] Chr14:45827312..50529931 [GRCh37]
Chr14:14q21.2-21.3		 uncertain significance
NC_000014.8:g.(?_50050385)_(50118115_?)dup duplication Primary ciliary dyskinesia [RCV001943130] Chr14:50050385..50118115 [GRCh37]
Chr14:14q21.3		 uncertain significance
NC_000014.8:g.(21162263_36986276)_(36987308_50713602)del deletion Brain-lung-thyroid syndrome [RCV002221171] Chr14:36986276..36987308 [GRCh37]
Chr14:14q11.2-21.3		 pathogenic
GRCh37/hg19 14q13.3-32.33(chr14:37671058-106985955)x2 copy number gain See cases [RCV002286356] Chr14:37671058..106985955 [GRCh37]
Chr14:14q13.3-32.33		 pathogenic
NM_001001.5(RPL36AL):c.61C>T (p.His21Tyr) single nucleotide variant Inborn genetic diseases [RCV002718407] Chr14:49619044 [GRCh38]
Chr14:50085762 [GRCh37]
Chr14:14q21.3		 uncertain significance
GRCh37/hg19 14q11.2-23.1(chr14:20511673-61826023)x3 copy number gain not provided [RCV003485022] Chr14:20511673..61826023 [GRCh37]
Chr14:14q11.2-23.1		 pathogenic
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:101
Count of miRNA genes:98
Interacting mature miRNAs:98
Transcripts:ENST00000298289
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Markers in Region
SHGC-36981  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371450,088,242 - 50,088,316UniSTSGRCh37
Build 361449,157,992 - 49,158,066RGDNCBI36
Celera1429,948,060 - 29,948,134RGD
Cytogenetic Map14q21UniSTS
HuRef1430,205,373 - 30,205,447UniSTS
GeneMap99-G3 RH Map141481.0UniSTS
RH71370  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371450,085,606 - 50,085,729UniSTSGRCh37
Build 361449,155,356 - 49,155,479RGDNCBI36
Celera1429,945,424 - 29,945,547RGD
Cytogenetic Map14qUniSTS
Cytogenetic Map14q21UniSTS
HuRef1430,202,737 - 30,202,860UniSTS
PMC140079P2  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371450,085,435 - 50,085,714UniSTSGRCh37
Build 361449,155,185 - 49,155,464RGDNCBI36
Celera1429,945,253 - 29,945,532RGD
Cytogenetic Map14qUniSTS
Cytogenetic Map14q21UniSTS
HuRef1430,202,566 - 30,202,845UniSTS
WI-19962  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh371450,085,434 - 50,085,693UniSTSGRCh37
Build 361449,155,184 - 49,155,443RGDNCBI36
Celera1429,945,252 - 29,945,511RGD
Cytogenetic Map14qUniSTS
Cytogenetic Map14q21UniSTS
HuRef1430,202,565 - 30,202,824UniSTS
GeneMap99-GB4 RH Map14110.57UniSTS
Whitehead-RH Map14159.3UniSTS
NCBI RH Map14461.5UniSTS
D6S1904  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map11p14.3UniSTS
Cytogenetic Map14q21UniSTS


Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system renal system reproductive system respiratory system sensory system adipose tissue appendage entire extraembryonic component
High 12 25 10 4 93 4 22 2 15 146 35 3 18
Medium 2420 2959 1713 618 1855 460 4333 2193 3706 403 1302 1573 168 1204 2770 4
Low
Below cutoff

Sequence

Nucleotide Sequences
RefSeq Transcripts NG_008920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NG_033054 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB063606 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AB063609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK311959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL139099 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC000741 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003145 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC070207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC107716 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM973694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068264 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CR542166 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DB447621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HY121971 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M15661 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENST00000298289   ⟹   ENSP00000346012
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl1449,618,530 - 49,620,626 (-)Ensembl
RefSeq Acc Id: NM_001001   ⟹   NP_000992
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh381449,618,530 - 49,620,626 (-)NCBI
GRCh371450,085,406 - 50,087,403 (-)NCBI
Build 361449,155,156 - 49,157,099 (-)NCBI Archive
Celera1429,945,224 - 29,947,167 (-)RGD
HuRef1430,202,537 - 30,204,534 (-)NCBI
CHM1_11450,024,410 - 50,026,407 (-)NCBI
T2T-CHM13v2.01443,816,754 - 43,818,850 (-)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_000992   ⟸   NM_001001
- UniProtKB: Q3B7A5 (UniProtKB/Swiss-Prot),   Q969Q0 (UniProtKB/Swiss-Prot),   B2R4V2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSP00000346012   ⟸   ENST00000298289

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q969Q0-F1-model_v2 AlphaFold Q969Q0 1-106 view protein structure

Promoters
RGD ID:6791853
Promoter ID:HG_KWN:19306
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Jurkat,   Lymphoblastoid
Transcripts:UC010ANM.1
Position:
Human AssemblyChrPosition (strand)Source
Build 361449,155,901 - 49,156,507 (-)MPROMDB
RGD ID:6791852
Promoter ID:HG_KWN:19307
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:CD4+TCell,   CD4+TCell_12Hour,   CD4+TCell_2Hour,   HeLa_S3,   Jurkat,   K562,   Lymphoblastoid,   NB4
Transcripts:OTTHUMT00000276808
Position:
Human AssemblyChrPosition (strand)Source
Build 361449,156,956 - 49,157,787 (-)MPROMDB
RGD ID:7227517
Promoter ID:EPDNEW_H19505
Type:initiation region
Name:RPL36AL_1
Description:ribosomal protein L36a like
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H19513  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh381449,620,620 - 49,620,680EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:10346 AgrOrtholog
COSMIC RPL36AL COSMIC
Ensembl Genes ENSG00000165502 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENST00000298289 ENTREZGENE
  ENST00000298289.7 UniProtKB/Swiss-Prot
Gene3D-CATH 3.10.450.80 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000165502 GTEx
HGNC ID HGNC:10346 ENTREZGENE
Human Proteome Map RPL36AL Human Proteome Map
InterPro Ribosomal_L44e UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ribosomal_zn-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:6166 UniProtKB/Swiss-Prot
NCBI Gene 6166 ENTREZGENE
OMIM 180469 OMIM
PANTHER 60S RIBOSOMAL PROTEIN L36A UniProtKB/TrEMBL
  60S RIBOSOMAL PROTEIN L36A-LIKE UniProtKB/Swiss-Prot
  60S RIBOSOMAL PROTEIN L36A/L44 UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
Pfam Ribosomal_L44 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA34732 PharmGKB
PROSITE RIBOSOMAL_L44E UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF57829 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt B2R4V2 ENTREZGENE, UniProtKB/TrEMBL
  Q3B7A5 ENTREZGENE
  Q969Q0 ENTREZGENE, UniProtKB/Swiss-Prot
UniProt Secondary Q3B7A5 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2022-02-10 RPL36AL  ribosomal protein L36a like  RPL36AP42  ribosomal protein L36a pseudogene 42  Data merged from RGD:2304433 737654 PROVISIONAL
2015-11-24 RPL36AL  ribosomal protein L36a like    ribosomal protein L36a-like  Symbol and/or name change 5135510 APPROVED