Cybb (cytochrome b-245, beta polypeptide) - Rat Genome Database

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Gene: Cybb (cytochrome b-245, beta polypeptide) Mus musculus
Analyze
Symbol: Cybb
Name: cytochrome b-245, beta polypeptide
RGD ID: 733265
MGI Page MGI
Description: Enables superoxide-generating NAD(P)H oxidase activity. Involved in inflammatory response; innate immune response; and superoxide metabolic process. Acts upstream of or within hydrogen peroxide biosynthetic process. Located in phagocytic vesicle and plasma membrane. Part of NADPH oxidase complex. Is expressed in several structures, including alimentary system; brain; cardiac muscle tissue; genitourinary system; and immune system. Used to study chronic granulomatous disease and systemic lupus erythematosus. Human ortholog(s) of this gene implicated in X-linked chronic granulomatous disease; chronic granulomatous disease; and immunodeficiency 34. Orthologous to human CYBB (cytochrome b-245 beta chain).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: C88302; Cgd; CGD91-phox; Cyd; cytochrome b(558) subunit beta; cytochrome b-245 heavy chain; cytochrome b558 subunit beta; gp91-1; gp91-phox; gp91
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X9,301,493 - 9,354,005 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX9,301,491 - 9,354,010 (-)EnsemblGRCm39 Ensembl
GRCm38X9,435,252 - 9,487,766 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX9,435,252 - 9,487,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X9,012,378 - 9,046,450 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X8,593,665 - 8,626,226 (-)NCBIMGSCv36mm8
CeleraX7,154,874 - 7,188,991 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX4.3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (EXP,ISO)
(-)-epigallocatechin 3-gallate  (ISO)
(1->4)-beta-D-glucan  (EXP)
(R)-carnitine  (ISO)
(R)-lipoic acid  (ISO)
1,1,1-Trichloro-2-(o-chlorophenyl)-2-(p-chlorophenyl)ethane  (ISO)
1,1-dichloroethene  (EXP)
1,2-dichloroethane  (EXP)
1-bromopropane  (ISO)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
17beta-estradiol 3-benzoate  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3',4,4',5-Pentachlorobiphenyl  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,5-dihydroxybenzoic acid  (EXP)
2-butoxyethanol  (EXP)
2-tert-butylhydroquinone  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxy-TEMPO  (ISO)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
7-ketocholesterol  (EXP)
acetaldehyde  (ISO)
acetamide  (ISO)
acetylcholine  (EXP)
adenine  (ISO)
aflatoxin B1  (EXP,ISO)
agomelatine  (ISO)
AICA ribonucleotide  (ISO)
aldehydo-D-glucose  (EXP,ISO)
all-trans-retinoic acid  (ISO)
allethrin  (ISO)
alpha-D-galactose  (ISO)
alpha-linolenic acid  (ISO)
amitriptyline  (EXP)
amitrole  (ISO)
amlodipine  (ISO)
ammonium chloride  (ISO)
anagliptin  (ISO)
antirheumatic drug  (ISO)
apocynin  (ISO)
aripiprazole  (ISO)
aristolochic acid A  (ISO)
arsane  (EXP,ISO)
arsenic atom  (EXP,ISO)
arsenite(3-)  (ISO)
arsenous acid  (EXP,ISO)
astaxanthin  (ISO)
atrazine  (EXP)
benzene  (EXP)
benzo[a]pyrene  (EXP,ISO)
berberine  (ISO)
Besigomsin  (EXP)
bezafibrate  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bisphenol F  (EXP)
buspirone  (ISO)
Butylbenzyl phthalate  (EXP)
cadmium atom  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
calcium oxalate  (ISO)
calcium silicate  (EXP)
camostat  (ISO)
candesartan  (ISO)
cannabidiol  (EXP)
capsaicin  (EXP,ISO)
captan  (EXP)
carnosic acid  (EXP)
CGP-42112A  (EXP)
chloroprene  (ISO)
chlorpyrifos  (EXP)
cholesterol  (EXP,ISO)
choline  (EXP)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt atom  (ISO)
cocaine  (EXP)
corosolic acid  (EXP,ISO)
cyfluthrin  (ISO)
cyhalothrin  (ISO)
cypermethrin  (ISO)
D-glucose  (EXP,ISO)
daunorubicin  (ISO)
Deoxycorticosterone acetate  (EXP)
desferrioxamine B  (EXP)
dexamethasone  (EXP,ISO)
dextran sulfate  (EXP)
Di-n-octyl phthalate  (EXP)
Diallyl sulfide  (EXP)
diallyl trisulfide  (ISO)
diarsenic trioxide  (EXP,ISO)
dibenziodolium  (EXP,ISO)
dibromine  (ISO)
dibutyl phthalate  (EXP)
dibutylstannane  (EXP)
dichlorvos  (ISO)
diclofenac  (EXP)
diethyl phthalate  (EXP)
Diisodecyl phthalate  (EXP)
diisononyl phthalate  (EXP)
dimethylarsinic acid  (EXP)
diminazene diaceturate  (ISO)
dioxygen  (EXP,ISO)
diquat  (EXP)
dorsomorphin  (ISO)
doxorubicin  (EXP,ISO)
eckol  (ISO)
edaravone  (ISO)
endosulfan  (EXP)
ethanol  (EXP,ISO)
fenvalerate  (ISO)
ferrostatin-1  (EXP)
filipin III  (EXP)
fisetin  (ISO)
flavonoids  (ISO)
flutamide  (ISO)
folic acid  (EXP)
fructose  (ISO)
galactose  (ISO)
genistein  (EXP)
gentamycin  (ISO)
geraniol  (EXP,ISO)
ginkgolide B  (ISO)
glucose  (EXP,ISO)
glyburide  (EXP)
glyoxylic acid  (ISO)
GW 501516  (ISO)
hemin  (ISO)
hexadecanoic acid  (ISO)
homocysteine  (EXP)
hydrochlorothiazide  (ISO)
hydrogen chloride  (EXP)
hydrogen peroxide  (ISO)
hydroxylamine  (ISO)
icosanoid  (ISO)
iron dextran  (ISO)
ketamine  (EXP)
L-ascorbic acid  (EXP)
L-methionine  (EXP)
lead diacetate  (EXP,ISO)
lead(0)  (ISO)
lidocaine  (ISO)
lipoic acid  (ISO)
lipopolysaccharide  (EXP,ISO)
liraglutide  (ISO)
malathion  (EXP)
malonaldehyde  (EXP)
maneb  (EXP,ISO)
manumycin A  (EXP)
medroxyprogesterone acetate  (ISO)
melatonin  (EXP,ISO)
metformin  (EXP,ISO)
methamphetamine  (ISO)
methyl beta-cyclodextrin  (EXP)
methylarsonic acid  (EXP)
methylglyoxal  (ISO)
methylmercury chloride  (ISO)
microcystin-LR  (EXP)
monocrotaline  (ISO)
morphine  (EXP)
N(gamma)-nitro-L-arginine methyl ester  (ISO)
N-acetyl-L-cysteine  (ISO)
N-formyl-L-methionyl-L-leucyl-L-phenylalanine  (EXP)
N-methyl-4-phenylpyridinium  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
NADP zwitterion  (EXP)
NADP(+)  (EXP)
nebivolol  (ISO)
nefazodone  (ISO)
nickel atom  (EXP,ISO)
nicotinamide  (EXP)
nimesulide  (ISO)
nitrofen  (ISO)
nitroglycerin  (EXP,ISO)
ochratoxin A  (ISO)
oxidopamine  (ISO)
ozone  (EXP,ISO)
palytoxin  (ISO)
paracetamol  (EXP)
paraquat  (EXP,ISO)
patulin  (ISO)
PD123319  (EXP)
perfluorooctane-1-sulfonic acid  (EXP)
phenobarbital  (EXP)
phenol  (ISO)
phorbol 13-acetate 12-myristate  (EXP,ISO)
pirinixic acid  (EXP)
prodigiosin  (EXP)
quercetin  (ISO)
ramipril  (EXP)
reactive oxygen species  (EXP,ISO)
resveratrol  (EXP,ISO)
rosuvastatin calcium  (EXP,ISO)
rotenone  (EXP,ISO)
Salidroside  (ISO)
salubrinal  (EXP)
Salvianolic acid A  (ISO)
salvianolic acid B  (ISO)
saquinavir  (EXP)
SB 203580  (EXP)
sildenafil citrate  (ISO)
silibinin  (ISO)
silicon dioxide  (ISO)
simvastatin  (ISO)
sirolimus  (ISO)
sirtinol  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium chloride  (EXP)
sodium cholate  (ISO)
spironolactone  (ISO)
staurosporine  (EXP)
streptozocin  (EXP,ISO)
succimer  (ISO)
sulforaphane  (ISO)
sunitinib  (ISO)
superoxide  (EXP,ISO)
tamibarotene  (ISO)
tangeretin  (ISO)
taurine  (EXP)
telmisartan  (EXP,ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetrodotoxin  (EXP)
thiacloprid  (ISO)
thioacetamide  (ISO)
titanium atom  (EXP)
titanium dioxide  (EXP)
torcetrapib  (ISO)
trans-piceid  (ISO)
tremolite asbestos  (EXP)
tributylstannane  (ISO)
trichloroethene  (ISO)
triclosan  (ISO)
triphenyl phosphate  (ISO)
tungsten  (EXP)
valsartan  (ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
zinc atom  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal aorta tunica media morphology  (IAGP)
abnormal atrioventricular cushion morphology  (IAGP)
abnormal atrioventricular valve morphology  (IAGP)
abnormal blood circulation  (IAGP)
abnormal cardiac epithelial to mesenchymal transition  (IAGP)
abnormal circulating chemokine level  (IAGP)
abnormal cued conditioning behavior  (IAGP)
abnormal glycosaminoglycan level  (IAGP)
abnormal heart development  (IAGP)
abnormal heart morphology  (IAGP)
abnormal immune system physiology  (IAGP)
abnormal intestinal mucosa morphology  (IAGP)
abnormal kidney morphology  (IAGP)
abnormal long-term potentiation  (IAGP)
abnormal macrophage chemotaxis  (IAGP)
abnormal macrophage physiology  (IAGP)
abnormal mitral valve morphology  (IAGP)
abnormal myocardial fiber morphology  (IAGP)
abnormal neutrophil physiology  (IAGP)
abnormal nitric oxide homeostasis  (IAGP)
abnormal redox activity  (IAGP)
abnormal renal glomerulus morphology  (IAGP)
abnormal righting response  (IAGP)
abnormal spatial learning  (IAGP)
abnormal stomach mucosa morphology  (IAGP)
abnormal tricuspid valve morphology  (IAGP)
atrial septal defect  (IAGP)
atrioventricular septal defect  (IAGP)
axon degeneration  (IAGP)
bicuspid aortic valve  (IAGP)
cardiac hypertrophy  (IAGP)
decreased birth weight  (IAGP)
decreased body length  (IAGP)
decreased body weight  (IAGP)
decreased cell proliferation  (IAGP)
decreased cholesterol level  (IAGP)
decreased circulating insulin level  (IAGP)
decreased circulating interleukin-10 level  (IAGP)
decreased circulating LDL cholesterol level  (IAGP)
decreased embryo size  (IAGP)
decreased fasting circulating glucose level  (IAGP)
decreased fat cell size  (IAGP)
decreased mean corpuscular volume  (IEA)
decreased metastatic potential  (IAGP)
decreased post-tetanic potentiation  (IAGP)
decreased renal plasma flow rate  (IAGP)
decreased renal vascular resistance  (IAGP)
decreased right ventricle systolic pressure  (IAGP)
decreased susceptibility to diet-induced obesity  (IAGP)
decreased systemic arterial blood pressure  (IAGP)
decreased systemic arterial systolic blood pressure  (IAGP)
decreased triglyceride level  (IAGP)
decreased tumor growth/size  (IAGP)
decreased urine sodium level  (IAGP)
decreased vertical activity  (IAGP)
embryonic growth retardation  (IAGP)
enlarged spleen  (IAGP)
glomerulonephritis  (IAGP)
granulomatous inflammation  (IAGP)
impaired coordination  (IAGP)
increased acute inflammation  (IAGP)
increased anti-double stranded DNA antibody level  (IAGP)
increased anti-nuclear antigen antibody level  (IAGP)
increased apoptosis  (IAGP)
increased autoantibody level  (IAGP)
increased blood urea nitrogen level  (IAGP)
increased brain size  (IAGP)
increased circulating creatinine level  (IAGP)
increased circulating HDL cholesterol level  (IAGP)
increased circulating interleukin-1 beta level  (IAGP)
increased circulating interleukin-12b level  (IAGP)
increased circulating interleukin-6 level  (IAGP)
increased epididymal fat pad weight  (IAGP)
increased IgG level  (IAGP)
increased inflammatory response  (IAGP)
increased lymphocyte cell number  (IAGP)
increased monocyte cell number  (IAGP)
increased neutrophil cell number  (IAGP)
increased renal glomerular filtration rate  (IAGP)
increased renal plasma flow rate  (IAGP)
increased skeletal muscle fiber size  (IAGP)
increased spleen weight  (IEA)
increased susceptibility to bacterial infection  (IAGP)
increased susceptibility to infection  (IAGP)
increased susceptibility to systemic lupus erythematosus  (IAGP)
increased urine creatinine level  (IAGP)
increased urine nitrite level  (IAGP)
increased urine protein level  (IAGP)
increased urine sodium level  (IAGP)
neurodegeneration  (IAGP)
oliguria  (IAGP)
paralysis  (IAGP)
postnatal lethality, incomplete penetrance  (IAGP)
premature death  (IAGP)
prenatal lethality, incomplete penetrance  (IAGP)
reduced long-term potentiation  (IAGP)
thick mitral valve cusps  (IAGP)
ventricular septal defect  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Oxidative stress contributes to pulmonary hypertension in the transgenic (mRen2)27 rat. DeMarco VG, etal., Am J Physiol Heart Circ Physiol. 2008 Jun;294(6):H2659-68. Epub 2008 Apr 18.
2. Nox2 is a mediator of chronic CsA nephrotoxicity. Djamali A, etal., Am J Transplant. 2012 Aug;12(8):1997-2007. doi: 10.1111/j.1600-6143.2012.04081.x. Epub 2012 May 8.
3. Expression of p22-phox and gp91-phox, essential components of NADPH oxidase, increases after myocardial infarction. Fukui T, etal., Biochem Biophys Res Commun. 2001 Mar;281(5):1200-6.
4. Mechanisms underlying endothelial dysfunction in diabetes mellitus. Hink U, etal., Circ Res. 2001 Feb 2;88(2):E14-22.
5. Atorvastatin protects against cerebral infarction via inhibition of NADPH oxidase-derived superoxide in ischemic stroke. Hong H, etal., Am J Physiol Heart Circ Physiol. 2006 Nov;291(5):H2210-5. Epub 2006 Jun 9.
6. Missense mutations in the gp91-phox gene encoding cytochrome b558 in patients with cytochrome b positive and negative X-linked chronic granulomatous disease. Kaneda M, etal., Blood. 1999 Mar 15;93(6):2098-104.
7. NADPH oxidase 2-derived reactive oxygen species in spinal cord microglia contribute to peripheral nerve injury-induced neuropathic pain. Kim D, etal., Proc Natl Acad Sci U S A. 2010 Aug 17;107(33):14851-6. doi: 10.1073/pnas.1009926107. Epub 2010 Aug 2.
8. Large-scale cDNA analysis reveals phased gene expression patterns during preimplantation mouse development. Ko MS, etal., Development 2000 Apr;127(8):1737-49.
9. Role of AT1 receptors and NAD(P)H oxidase in diabetes-aggravated ischemic brain injury. Kusaka I, etal., Am J Physiol Heart Circ Physiol. 2004 Jun;286(6):H2442-51.
10. The Gastric Mucosa from Patients Infected with CagA+ or VacA+ Helicobacter pylori Has a Lower Level of Dual Oxidase-2 Expression than Uninfected or Infected with CagA-/VacA- H. pylori. Li H, etal., Dig Dis Sci. 2016 Aug;61(8):2328-2337. doi: 10.1007/s10620-016-4144-z. Epub 2016 Apr 5.
11. Local arterial nanoparticle delivery of siRNA for NOX2 knockdown to prevent restenosis in an atherosclerotic rat model. Li JM, etal., Gene Ther. 2010 Oct;17(10):1279-87. doi: 10.1038/gt.2010.69. Epub 2010 May 20.
12. Iron and oxidative stress in renal insufficiency. Lim CS and Vaziri ND, Am J Nephrol. 2004 Nov-Dec;24(6):569-75. Epub 2004 Nov 17.
13. MGDs mouse GO annotations MGD data from the GO Consortium
14. MGD IEA MGD IEA
15. Mutations in the promoter region of the gene for gp91-phox in X-linked chronic granulomatous disease with decreased expression of cytochrome b558. Newburger PE, etal., J Clin Invest. 1994 Sep;94(3):1205-11.
16. The role of NADPH oxidase in chronic intermittent hypoxia-induced pulmonary hypertension in mice. Nisbet RE, etal., Am J Respir Cell Mol Biol. 2009 May;40(5):601-9. Epub 2008 Oct 23.
17. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
18. OMIM Disease Annotation Pipeline OMIM Disease Annotation Pipeline
19. Neuroprotective effect of hyperbaric oxygen in a rat model of subarachnoid hemorrhage. Ostrowski RP, etal., Acta Neurochir Suppl. 2006;96:188-93.
20. SMPDB Annotation Import Pipeline Pipeline to import SMPDB annotations from SMPDB into RGD
21. Mouse model of X-linked chronic granulomatous disease, an inherited defect in phagocyte superoxide production. Pollock JD, etal., Nat Genet 1995 Feb;9(2):202-9.
22. Oxidative burst and neutrophil elastase contribute to clearance of Aspergillus fumigatus pneumonia in mice. Prufer S, etal., Immunobiology. 2014 Feb;219(2):87-96. doi: 10.1016/j.imbio.2013.08.010. Epub 2013 Aug 30.
23. A 40-base-pair duplication in the gp91-phox gene leading to X-linked chronic granulomatous disease. Rabbani H, etal., Eur J Haematol. 1993 Oct;51(4):218-22.
24. Nonresolving inflammation in gp91phox-/- mice, a model of human chronic granulomatous disease, has lower adenosine and cyclic adenosine 5'-monophosphate. Rajakariar R, etal., J Immunol. 2009 Mar 1;182(5):3262-9. doi: 10.4049/jimmunol.0801739.
25. Mouse MP Annotation Import Pipeline RGD automated import pipeline
26. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
27. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
28. Long-term high-level reconstitution of NADPH oxidase activity in murine X-linked chronic granulomatous disease using a bicistronic vector expressing gp91phox and a Delta LNGFR cell surface marker. Sadat MA, etal., Hum Gene Ther. 2003 May 1;14(7):651-66.
29. Impairment of autoregulatory vasodilation by NAD(P)H oxidase-dependent superoxide generation during acute stage of subarachnoid hemorrhage in rat pial artery. Shin HK, etal., J Cereb Blood Flow Metab. 2002 Jul;22(7):869-77.
30. Superoxide dismutase, catalase, glutathione peroxidase and NADPH oxidase in lead-induced hypertension. Vaziri ND, etal., Kidney Int. 2003 Jan;63(1):186-94.
31. Calcium paradox of aldosteronism and the role of the parathyroid glands. Vidal A, etal., Am J Physiol Heart Circ Physiol. 2006 Jan;290(1):H286-94.
32. Point mutations in the promoter region of the CYBB gene leading to mild chronic granulomatous disease. Weening RS, etal., Clin Exp Immunol. 2000 Dec;122(3):410-7.
Additional References at PubMed
PMID:1572636   PMID:1679744   PMID:1973380   PMID:2004781   PMID:2011396   PMID:2110546   PMID:2296595   PMID:2561974   PMID:2573045   PMID:2903046   PMID:3197451   PMID:7613037  
PMID:8431636   PMID:8432533   PMID:8530041   PMID:8634451   PMID:8835523   PMID:8889548   PMID:8921395   PMID:8978275   PMID:9190903   PMID:9368573   PMID:9611252   PMID:9858522  
PMID:9989990   PMID:10023768   PMID:10220301   PMID:10349636   PMID:10393927   PMID:10447107   PMID:10760304   PMID:10858261   PMID:10899909   PMID:10899910   PMID:10922068   PMID:10924691  
PMID:10982764   PMID:11042159   PMID:11050424   PMID:11076861   PMID:11158964   PMID:11217851   PMID:11348637   PMID:11349005   PMID:11389011   PMID:11466382   PMID:11557596   PMID:11714743  
PMID:11729200   PMID:11742795   PMID:11804982   PMID:11859135   PMID:11874480   PMID:11937554   PMID:12085336   PMID:12136274   PMID:12213046   PMID:12370260   PMID:12417549   PMID:12471131  
PMID:12477932   PMID:12721941   PMID:12829028   PMID:12855428   PMID:12867501   PMID:12874355   PMID:12882933   PMID:14507659   PMID:14551238   PMID:14555723   PMID:14573667   PMID:14578353  
PMID:14651853   PMID:14670846   PMID:14718366   PMID:14742542   PMID:14981002   PMID:15037533   PMID:15070892   PMID:15126623   PMID:15194196   PMID:15214027   PMID:15243751   PMID:15258578  
PMID:15308582   PMID:15316118   PMID:15331375   PMID:15353593   PMID:15364466   PMID:15385471   PMID:15489334   PMID:15499027   PMID:15528159   PMID:15601666   PMID:15716413   PMID:15718414  
PMID:15731028   PMID:15753233   PMID:15778277   PMID:15795323   PMID:15808416   PMID:15850784   PMID:15851618   PMID:15867174   PMID:15920727   PMID:15923406   PMID:15956283   PMID:15983040  
PMID:15998743   PMID:16041008   PMID:16081759   PMID:16085672   PMID:16107509   PMID:16117799   PMID:16127156   PMID:16141072   PMID:16141073   PMID:16157517   PMID:16185269   PMID:16207877  
PMID:16236999   PMID:16280460   PMID:16357364   PMID:16407283   PMID:16449797   PMID:16469824   PMID:16670275   PMID:16715116   PMID:16720735   PMID:16760512   PMID:16775014   PMID:16816381  
PMID:16836651   PMID:16839887   PMID:16847341   PMID:16872848   PMID:16877369   PMID:16877542   PMID:16895445   PMID:16920786   PMID:17000727   PMID:17015737   PMID:17030572   PMID:17046793  
PMID:17116747   PMID:17197441   PMID:17275678   PMID:17292348   PMID:17293848   PMID:17316569   PMID:17317004   PMID:17429347   PMID:17438039   PMID:17517868   PMID:17561090   PMID:17617585  
PMID:17627623   PMID:17654704   PMID:17697942   PMID:17724077   PMID:17761955   PMID:17803037   PMID:17853944   PMID:17982061   PMID:17984307   PMID:18063801   PMID:18098349   PMID:18180403  
PMID:18202172   PMID:18202350   PMID:18203709   PMID:18219391   PMID:18270590   PMID:18272685   PMID:18326795   PMID:18378574   PMID:18383034   PMID:18397177   PMID:18399718   PMID:18402834  
PMID:18403597   PMID:18408127   PMID:18440230   PMID:18453606   PMID:18467643   PMID:18497334   PMID:18534653   PMID:18559982   PMID:18566433   PMID:18573285   PMID:18583711   PMID:18596078  
PMID:18604212   PMID:18620044   PMID:18755982   PMID:18806296   PMID:18809714   PMID:18824544   PMID:18952895   PMID:18987286   PMID:19005069   PMID:19028794   PMID:19033667   PMID:19050294  
PMID:19076165   PMID:19091984   PMID:19096031   PMID:19103777   PMID:19124074   PMID:19151256   PMID:19168729   PMID:19201887   PMID:19204183   PMID:19211495   PMID:19244529   PMID:19249346  
PMID:19283362   PMID:19328020   PMID:19369559   PMID:19380816   PMID:19390057   PMID:19409483   PMID:19417757   PMID:19436757   PMID:19439231   PMID:19450605   PMID:19471020   PMID:19546249  
PMID:19574557   PMID:19590038   PMID:19638500   PMID:19644121   PMID:19648288   PMID:19652710   PMID:19661248   PMID:19679834   PMID:19696433   PMID:19717511   PMID:19729481   PMID:19799774  
PMID:19837950   PMID:19877015   PMID:19934023   PMID:19935767   PMID:20053956   PMID:20089706   PMID:20116427   PMID:20145655   PMID:20167907   PMID:20195241   PMID:20300512   PMID:20351694  
PMID:20356394   PMID:20395635   PMID:20433879   PMID:20493939   PMID:20498052   PMID:20511556   PMID:20541007   PMID:20606471   PMID:20627937   PMID:20659322   PMID:20679530   PMID:20685364  
PMID:20693431   PMID:20706193   PMID:20739552   PMID:20803017   PMID:20805415   PMID:20813896   PMID:20818396   PMID:20826812   PMID:20869433   PMID:20876310   PMID:20876456   PMID:20877715  
PMID:20878767   PMID:20884632   PMID:20940302   PMID:20952384   PMID:21035758   PMID:21078850   PMID:21130984   PMID:21135141   PMID:21205985   PMID:21209957   PMID:21212270   PMID:21215311  
PMID:21228274   PMID:21248133   PMID:21262967   PMID:21267068   PMID:21273555   PMID:21277990   PMID:21282379   PMID:21302291   PMID:21303700   PMID:21304882   PMID:21321074   PMID:21321580  
PMID:21368743   PMID:21372137   PMID:21376114   PMID:21383050   PMID:21474822   PMID:21502376   PMID:21511012   PMID:21512969   PMID:21519143   PMID:21524749   PMID:21528437   PMID:21551061  
PMID:21576322   PMID:21593419   PMID:21606175   PMID:21624938   PMID:21625437   PMID:21630251   PMID:21641399   PMID:21664456   PMID:21677136   PMID:21677750   PMID:21731762   PMID:21811407  
PMID:21873635   PMID:21896326   PMID:21896730   PMID:21896770   PMID:21903813   PMID:21911709   PMID:21917939   PMID:21940680   PMID:22002428   PMID:22003059   PMID:22028221   PMID:22033010  
PMID:22038056   PMID:22065732   PMID:22075471   PMID:22140041   PMID:22145029   PMID:22157818   PMID:22160304   PMID:22164282   PMID:22177565   PMID:22198504   PMID:22222227   PMID:22252868  
PMID:22290850   PMID:22315398   PMID:22337127   PMID:22343416   PMID:22348160   PMID:22399808   PMID:22412195   PMID:22456182   PMID:22491245   PMID:22493499   PMID:22529530   PMID:22541070  
PMID:22549734   PMID:22560120   PMID:22560444   PMID:22561462   PMID:22593622   PMID:22628375   PMID:22648949   PMID:22658259   PMID:22685019   PMID:22728935   PMID:22814241   PMID:22875784  
PMID:22875785   PMID:22896039   PMID:22911512   PMID:22914323   PMID:22930452   PMID:22933115   PMID:22956539   PMID:22973021   PMID:22982779   PMID:23000198   PMID:23002437   PMID:23029007  
PMID:23064009   PMID:23090770   PMID:23100220   PMID:23100627   PMID:23115246   PMID:23118986   PMID:23132496   PMID:23159440   PMID:23225886   PMID:23233541   PMID:23241962   PMID:23242472  
PMID:23271700   PMID:23275600   PMID:23293064   PMID:23303671   PMID:23306835   PMID:23348743   PMID:23349484   PMID:23383302   PMID:23386616   PMID:23389458   PMID:23401562   PMID:23403555  
PMID:23436933   PMID:23453926   PMID:23454539   PMID:23459072   PMID:23476056   PMID:23536230   PMID:23553616   PMID:23576679   PMID:23590311   PMID:23603832   PMID:23613889   PMID:23630228  
PMID:23635512   PMID:23639811   PMID:23644505   PMID:23670194   PMID:23708969   PMID:23732704   PMID:23763437   PMID:23805104   PMID:23832701   PMID:23836548   PMID:23857584   PMID:23903654  
PMID:23908114   PMID:23922763   PMID:23933064   PMID:23948707   PMID:23957783   PMID:23982049   PMID:24014678   PMID:24051369   PMID:24053613   PMID:24072007   PMID:24077950   PMID:24104877  
PMID:24106122   PMID:24143212   PMID:24194600   PMID:24197130   PMID:24213612   PMID:24256560   PMID:24260524   PMID:24270180   PMID:24277523   PMID:24281189   PMID:24285500   PMID:24358357  
PMID:24362892   PMID:24371139   PMID:24379900   PMID:24412613   PMID:24440789   PMID:24487388   PMID:24494191   PMID:24563256   PMID:24624929   PMID:24631774   PMID:24633549   PMID:24704899  
PMID:24739962   PMID:24760992   PMID:24778444   PMID:24793165   PMID:24807872   PMID:24838752   PMID:24869957   PMID:24901456   PMID:24945495   PMID:24952429   PMID:24991871   PMID:25073061  
PMID:25116588   PMID:25128166   PMID:25139590   PMID:25143378   PMID:25166912   PMID:25188296   PMID:25189573   PMID:25209287   PMID:25225402   PMID:25232114   PMID:25233448   PMID:25238096  
PMID:25244096   PMID:25253686   PMID:25322462   PMID:25326583   PMID:25375101   PMID:25425233   PMID:25460548   PMID:25502554   PMID:25529920   PMID:25548165   PMID:25562624   PMID:25598081  
PMID:25661082   PMID:25710879   PMID:25740080   PMID:25774716   PMID:25821233   PMID:25825489   PMID:25825709   PMID:25867281   PMID:25873309   PMID:25885273   PMID:25892960   PMID:25922068  
PMID:25946330   PMID:25959047   PMID:26032418   PMID:26100668   PMID:26173697   PMID:26194095   PMID:26223840   PMID:26228838   PMID:26254234   PMID:26257170   PMID:26294657   PMID:26297224  
PMID:26298737   PMID:26333777   PMID:26412187   PMID:26443623   PMID:26648475   PMID:26756466   PMID:26757359   PMID:26786324   PMID:26814205   PMID:26838550   PMID:26907999   PMID:26950727  
PMID:26975635   PMID:26988591   PMID:26988594   PMID:27107694   PMID:27178323   PMID:27212019   PMID:27221536   PMID:27223610   PMID:27256569   PMID:27266634   PMID:27317946   PMID:27399878  
PMID:27438994   PMID:27467102   PMID:27477920   PMID:27488058   PMID:27489105   PMID:27521459   PMID:27526712   PMID:27543673   PMID:27554297   PMID:27601184   PMID:27607191   PMID:27613094  
PMID:27624556   PMID:27626380   PMID:27642005   PMID:27650496   PMID:27664519   PMID:27698473   PMID:27709751   PMID:27729244   PMID:27785664   PMID:27797149   PMID:27841763   PMID:27897222  
PMID:27912196   PMID:27975175   PMID:28124622   PMID:28165467   PMID:28202460   PMID:28216386   PMID:28235862   PMID:28237879   PMID:28249219   PMID:28264583   PMID:28298457   PMID:28301257  
PMID:28314592   PMID:28340575   PMID:28351984   PMID:28375544   PMID:28378742   PMID:28419151   PMID:28424248   PMID:28432145   PMID:28433943   PMID:28458776   PMID:28459434   PMID:28494242  
PMID:28515043   PMID:28575744   PMID:28593564   PMID:28595650   PMID:28687315   PMID:28688576   PMID:28701733   PMID:28733324   PMID:28751937   PMID:28760732   PMID:28771483   PMID:28785377  
PMID:28790356   PMID:28801234   PMID:28830894   PMID:28844888   PMID:28917508   PMID:28954231   PMID:28973896   PMID:28978491   PMID:29150539   PMID:29154191   PMID:29158219   PMID:29158417  
PMID:29269727   PMID:29363860   PMID:29377505   PMID:29381135   PMID:29404493   PMID:29434374   PMID:29468369   PMID:29487866   PMID:29524539   PMID:29618478   PMID:29623489   PMID:29649637  
PMID:29660503   PMID:29688896   PMID:29734661   PMID:29750788   PMID:29789380   PMID:29884826   PMID:29949402   PMID:30061198   PMID:30062795   PMID:30154263   PMID:30157428   PMID:30201810  
PMID:30245008   PMID:30288635   PMID:30323311   PMID:30342191   PMID:30449314   PMID:30533174   PMID:30559322   PMID:30578820   PMID:30667543   PMID:30702344   PMID:30755476   PMID:30760929  
PMID:30842418   PMID:30858618   PMID:30867238   PMID:30895693   PMID:30911105   PMID:30919410   PMID:30943405   PMID:30995985   PMID:31037153   PMID:31053611   PMID:31085592   PMID:31202927  
PMID:31217465   PMID:31228552   PMID:31308397   PMID:31329158   PMID:31338092   PMID:31349119   PMID:31646444   PMID:31715629   PMID:31875551   PMID:31898747   PMID:31919083   PMID:31923552  
PMID:31950520   PMID:31951647   PMID:31999809   PMID:32019675   PMID:32024700   PMID:32077922   PMID:32198221   PMID:32245800   PMID:32245826   PMID:32325033   PMID:32352382   PMID:32392230  
PMID:32401602   PMID:32401607   PMID:32483169   PMID:32506037   PMID:32507594   PMID:32554809   PMID:32575797   PMID:32584791   PMID:32655758   PMID:32669546   PMID:32721081   PMID:32743737  
PMID:32781293   PMID:32788720   PMID:32939668   PMID:32967913   PMID:33054395   PMID:33077946   PMID:33232321   PMID:33237428   PMID:33249137   PMID:33267663   PMID:33275875   PMID:33288542  
PMID:33301718   PMID:33349630   PMID:33391487   PMID:33462436   PMID:33600816   PMID:33664862   PMID:33691478   PMID:33836590   PMID:33852876   PMID:33868252   PMID:33868265   PMID:33932464  
PMID:34018220   PMID:34301842   PMID:34504272   PMID:34755642   PMID:34784249   PMID:34798142   PMID:34902531   PMID:35092565   PMID:35102790   PMID:35104805   PMID:35333571   PMID:35357446  
PMID:35660876   PMID:35728802   PMID:35733245   PMID:35816543   PMID:35933903   PMID:35977488   PMID:36103336   PMID:36103834   PMID:36332160   PMID:36421765   PMID:36426951   PMID:36436728  
PMID:36709665   PMID:36756129   PMID:36835372   PMID:36870375   PMID:36897852   PMID:36996623   PMID:37195185   PMID:37268807   PMID:37307924   PMID:37314361   PMID:37508499   PMID:37820403  
PMID:38127624   PMID:38244728   PMID:38307020   PMID:38395995  


Genomics

Comparative Map Data
Cybb
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X9,301,493 - 9,354,005 (-)NCBIGRCm39GRCm39mm39
GRCm39 EnsemblX9,301,491 - 9,354,010 (-)EnsemblGRCm39 Ensembl
GRCm38X9,435,252 - 9,487,766 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX9,435,252 - 9,487,771 (-)EnsemblGRCm38mm10GRCm38
MGSCv37X9,012,378 - 9,046,450 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36X8,593,665 - 8,626,226 (-)NCBIMGSCv36mm8
CeleraX7,154,874 - 7,188,991 (-)NCBICelera
Cytogenetic MapXA1.1NCBI
cM MapX4.3NCBI
CYBB
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38X37,780,059 - 37,813,461 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX37,780,018 - 37,813,461 (+)EnsemblGRCh38hg38GRCh38
GRCh37X37,639,312 - 37,672,714 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36X37,524,264 - 37,557,658 (+)NCBINCBI36Build 36hg18NCBI36
Build 34X37,395,536 - 37,428,931NCBI
CeleraX41,776,951 - 41,810,391 (+)NCBICelera
Cytogenetic MapXp21.1-p11.4NCBI
HuRefX35,383,460 - 35,418,115 (+)NCBIHuRef
CHM1_1X37,670,409 - 37,703,853 (+)NCBICHM1_1
T2T-CHM13v2.0X37,183,630 - 37,217,034 (+)NCBIT2T-CHM13v2.0
Cybb
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8X16,030,596 - 16,065,065 (-)NCBIGRCr8
mRatBN7.2X13,358,101 - 13,392,570 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 EnsemblX13,359,430 - 13,392,586 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_UtxX13,547,712 - 13,579,740 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0X17,044,644 - 17,076,674 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0X13,301,229 - 13,333,255 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0X14,578,330 - 14,610,049 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 EnsemblX14,578,264 - 14,612,547 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0X15,359,405 - 15,391,317 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4X25,514,572 - 25,547,181 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1X25,568,040 - 25,600,650 (-)NCBI
CeleraX14,033,486 - 14,065,403 (+)NCBICelera
Cytogenetic MapXq12NCBI
LOC102012042
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955587781,388 - 819,912 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955587781,533 - 818,149 (+)NCBIChiLan1.0ChiLan1.0
LOC100982531
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2X39,424,548 - 39,465,874 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1X39,432,267 - 39,469,265 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0X30,230,394 - 30,267,379 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X37,939,744 - 37,976,116 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX37,939,704 - 37,973,183 (+)Ensemblpanpan1.1panPan2
CYBB
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1X32,533,365 - 32,568,149 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 EnsemblX32,533,320 - 32,568,217 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_TashaX19,880,947 - 19,915,729 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0X32,578,634 - 32,613,434 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 EnsemblX32,578,588 - 32,614,792 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1X32,660,059 - 32,694,839 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0X32,623,867 - 32,658,828 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0X32,671,823 - 32,706,767 (+)NCBIUU_Cfam_GSD_1.0
LOC101966992
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2X24,791,011 - 24,835,926 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365024,635,149 - 4,676,904 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365024,631,750 - 4,676,686 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
GP91-PHOX
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX33,643,648 - 33,680,580 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X33,654,656 - 33,678,346 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X37,355,082 - 37,392,480 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CYBB
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366605638,240,025 - 38,273,771 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
LOC101709509
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462476217,757,404 - 17,793,467 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462476217,759,625 - 17,793,434 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Cybb
1189 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1399
Count of miRNA genes:691
Interacting mature miRNAs:876
Transcripts:ENSMUST00000015484, ENSMUST00000131591, ENSMUST00000154503, ENSMUST00000164685, ENSMUST00000170885
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1302195Pbwg10_mpostnatal body weight growth 10 (mouse)Not determinedX126202173Mouse
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7226295150107038Mouse

Markers in Region
BB222960  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X9,435,306 - 9,435,392UniSTSGRCm38
MGSCv37X9,012,432 - 9,012,518UniSTSGRCm37
CeleraX7,154,928 - 7,155,014UniSTS
Cytogenetic MapXA1.1UniSTS
Whitehead/MRC_RHX98.06UniSTS
C88302  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X9,437,177 - 9,437,324UniSTSGRCm38
MGSCv37X9,014,303 - 9,014,450UniSTSGRCm37
CeleraX7,156,800 - 7,156,947UniSTS
Cytogenetic MapXA1.1UniSTS
Whitehead/MRC_RHX95.57UniSTS
Cybb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv37X9,015,363 - 9,017,062UniSTSGRCm37
CeleraX7,157,860 - 7,159,559UniSTS
Cytogenetic MapXA1.1UniSTS
cM MapX2.8UniSTS
Cybb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X9,438,237 - 9,439,936UniSTSGRCm38
MGSCv37X9,015,363 - 9,017,062UniSTSGRCm37
CeleraX7,157,860 - 7,159,559UniSTS
Cytogenetic MapXA1.1UniSTS
cM MapX2.8UniSTS
Cybb  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXA1.1UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_007807 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006527565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AK033570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK042140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK053920 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK079926 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK080203 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK152257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153071 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153154 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK153259 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK154126 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK160031 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK169930 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK171526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL671864 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC003910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC042838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC071229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY194282 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  FJ168469 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  U43384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000015484   ⟹   ENSMUSP00000015484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX9,301,491 - 9,335,563 (-)Ensembl
GRCm38.p6 EnsemblX9,435,252 - 9,469,324 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131591
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX9,331,227 - 9,335,509 (-)Ensembl
GRCm38.p6 EnsemblX9,464,988 - 9,469,270 (-)Ensembl
RefSeq Acc Id: ENSMUST00000154503
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX9,315,620 - 9,317,772 (-)Ensembl
GRCm38.p6 EnsemblX9,449,381 - 9,451,533 (-)Ensembl
RefSeq Acc Id: ENSMUST00000164685   ⟹   ENSMUSP00000128963
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX9,313,164 - 9,335,508 (-)Ensembl
GRCm38.p6 EnsemblX9,446,925 - 9,469,269 (-)Ensembl
RefSeq Acc Id: ENSMUST00000170885   ⟹   ENSMUSP00000128993
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 EnsemblX9,323,257 - 9,354,010 (-)Ensembl
GRCm38.p6 EnsemblX9,457,018 - 9,487,771 (-)Ensembl
RefSeq Acc Id: NM_007807   ⟹   NP_031833
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X9,301,493 - 9,335,563 (-)NCBI
GRCm38X9,435,254 - 9,469,324 (-)NCBI
MGSCv37X9,012,378 - 9,046,450 (-)RGD
CeleraX7,154,876 - 7,188,991 (-)NCBI
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006527565   ⟹   XP_006527628
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X9,301,731 - 9,354,005 (-)NCBI
GRCm38X9,435,252 - 9,487,766 (-)NCBI
Sequence:
RefSeq Acc Id: NP_031833   ⟸   NM_007807
- UniProtKB: Q61093 (UniProtKB/Swiss-Prot),   Q3U6G0 (UniProtKB/TrEMBL),   Q3U4P0 (UniProtKB/TrEMBL),   Q8C6S5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006527628   ⟸   XM_006527565
- Peptide Label: isoform X1
- UniProtKB: Q61093 (UniProtKB/Swiss-Prot),   Q3U6G0 (UniProtKB/TrEMBL),   Q3U4P0 (UniProtKB/TrEMBL),   Q8C6S5 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000128963   ⟸   ENSMUST00000164685
RefSeq Acc Id: ENSMUSP00000015484   ⟸   ENSMUST00000015484
RefSeq Acc Id: ENSMUSP00000128993   ⟸   ENSMUST00000170885
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q61093-F1-model_v2 AlphaFold Q61093 1-570 view protein structure

Promoters
RGD ID:6845437
Promoter ID:MM_KWN:59554
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   Lung
Transcripts:UC009SPU.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X9,013,011 - 9,015,332 (-)MPROMDB
RGD ID:6848519
Promoter ID:MM_ACW:52703
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour
Transcripts:CYBB.DSEP07
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X9,016,871 - 9,017,371 (-)MPROMDB
RGD ID:6845585
Promoter ID:MM_KWN:59555
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_4Hour
Transcripts:OTTMUST00000044256
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X9,028,481 - 9,029,132 (-)MPROMDB
RGD ID:6845584
Promoter ID:MM_KWN:59556
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Spleen
Transcripts:NM_007807,   OTTMUST00000040997
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X9,046,311 - 9,047,442 (-)MPROMDB
RGD ID:13680074
Promoter ID:EPDNEW_M24186
Type:initiation region
Name:Cybb_1
Description:Mus musculus cytochrome b-245, beta polypeptide , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X9,469,323 - 9,469,383EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:88574 AgrOrtholog
Ensembl Genes ENSMUSG00000015340 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000015484 ENTREZGENE
  ENSMUST00000015484.10 UniProtKB/Swiss-Prot
  ENSMUST00000164685.8 UniProtKB/TrEMBL
  ENSMUST00000170885.2 UniProtKB/TrEMBL
Gene3D-CATH 3.40.50.80 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Translation factors UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Cyt_b245_heavy_chain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAD-bd_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FAD-bd_FR_type UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fe3_Rdtase_TM_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Fe_red_NAD-bd_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FNR_nucleotide-bd UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Riboflavin_synthase-like_b-brl UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:13058 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:88574 ENTREZGENE
NCBI Gene 13058 ENTREZGENE
PANTHER CYTOCHROME B-245 HEAVY CHAIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NADPH OXIDASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FAD_binding_8 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ferric_reduct UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NAD_binding_6 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Cybb PhenoGen
PRINTS GP91PHOX UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE FAD_FR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52343 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF63380 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt CY24B_MOUSE UniProtKB/Swiss-Prot
  E9Q7S3_MOUSE UniProtKB/TrEMBL
  E9Q802_MOUSE UniProtKB/TrEMBL
  Q3TVP4_MOUSE UniProtKB/TrEMBL
  Q3U4P0 ENTREZGENE, UniProtKB/TrEMBL
  Q3U6G0 ENTREZGENE, UniProtKB/TrEMBL
  Q3U6M7_MOUSE UniProtKB/TrEMBL
  Q61093 ENTREZGENE
  Q8C6S5 ENTREZGENE, UniProtKB/TrEMBL