NPFFR2 (neuropeptide FF receptor 2) - Rat Genome Database

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Gene: NPFFR2 (neuropeptide FF receptor 2) Homo sapiens
Analyze
Symbol: NPFFR2
Name: neuropeptide FF receptor 2
RGD ID: 733261
HGNC Page HGNC:4525
Description: Enables neuropeptide receptor activity. Involved in neuropeptide signaling pathway. Located in actin cytoskeleton. Is active in plasma membrane.
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: G protein-coupled receptor 74; G-protein coupled receptor 74; G-protein coupled receptor HLWAR77; GPR74; HLWAR77; neuropeptide FF 2; neuropeptide G-protein coupled receptor; NPFF2; NPGPR
RGD Orthologs
Mouse
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Allele / Splice: See ClinVar data
Latest Assembly: GRCh38 - Human Genome Assembly GRCh38
Position:
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38472,032,000 - 72,148,305 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl472,031,902 - 72,148,305 (+)EnsemblGRCh38hg38GRCh38
GRCh37472,897,717 - 73,014,022 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36473,116,385 - 73,232,642 (+)NCBINCBI36Build 36hg18NCBI36
Build 34473,270,125 - 73,378,813NCBI
Celera470,253,879 - 70,369,821 (+)NCBICelera
Cytogenetic Map4q13.3NCBI
HuRef468,702,459 - 68,818,720 (+)NCBIHuRef
CHM1_1472,933,070 - 73,049,409 (+)NCBICHM1_1
T2T-CHM13v2.0475,374,029 - 75,490,284 (+)NCBIT2T-CHM13v2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
actin cytoskeleton  (IDA)
membrane  (IEA)
plasma membrane  (IDA,IEA,TAS)

Molecular Function

References

References - curated
# Reference Title Reference Citation
1. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
2. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10079187   PMID:10837915   PMID:10851242   PMID:11024015   PMID:12477932   PMID:12606605   PMID:12609745   PMID:15127947   PMID:15146197   PMID:15608144   PMID:16336216   PMID:16488513  
PMID:16754659   PMID:17157836   PMID:17503329   PMID:18029348   PMID:18565622   PMID:19944730   PMID:20600636   PMID:21818152   PMID:21873635   PMID:22375000   PMID:25326382   PMID:26211894  
PMID:32296183   PMID:33058233   PMID:36535464  


Genomics

Comparative Map Data
NPFFR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38472,032,000 - 72,148,305 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl472,031,902 - 72,148,305 (+)EnsemblGRCh38hg38GRCh38
GRCh37472,897,717 - 73,014,022 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36473,116,385 - 73,232,642 (+)NCBINCBI36Build 36hg18NCBI36
Build 34473,270,125 - 73,378,813NCBI
Celera470,253,879 - 70,369,821 (+)NCBICelera
Cytogenetic Map4q13.3NCBI
HuRef468,702,459 - 68,818,720 (+)NCBIHuRef
CHM1_1472,933,070 - 73,049,409 (+)NCBICHM1_1
T2T-CHM13v2.0475,374,029 - 75,490,284 (+)NCBIT2T-CHM13v2.0
Npffr2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39589,674,805 - 89,731,473 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl589,675,288 - 89,731,599 (+)EnsemblGRCm39 Ensembl
GRCm38589,526,840 - 89,583,914 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl589,527,429 - 89,583,740 (+)EnsemblGRCm38mm10GRCm38
MGSCv37589,956,454 - 90,012,765 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36590,602,628 - 90,658,939 (+)NCBIMGSCv36mm8
Celera587,701,454 - 87,717,464 (+)NCBICelera
Cytogenetic Map5E1NCBI
cM Map544.32NCBI
Npffr2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81418,794,868 - 18,842,186 (-)NCBIGRCr8
mRatBN7.21418,513,120 - 18,558,074 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1418,513,277 - 18,521,919 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1418,503,730 - 18,512,373 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01419,822,615 - 19,831,258 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01418,537,009 - 18,545,776 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01420,148,485 - 20,193,577 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1420,148,913 - 20,193,083 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01420,054,945 - 20,099,540 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41420,041,856 - 20,050,499 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11420,041,855 - 20,050,499 (-)NCBI
Celera1417,879,584 - 17,888,229 (-)NCBICelera
Cytogenetic Map14p22NCBI
Npffr2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554471,112,854 - 1,205,322 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554471,112,856 - 1,205,051 (-)NCBIChiLan1.0ChiLan1.0
NPFFR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2357,930,645 - 58,049,684 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1458,128,207 - 58,246,527 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0452,073,462 - 52,189,443 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1458,393,065 - 58,412,577 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl458,393,065 - 58,508,526 (-)Ensemblpanpan1.1panPan2
NPFFR2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11361,140,285 - 61,164,966 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1361,148,828 - 61,164,811 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1360,874,074 - 60,899,431 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01361,950,541 - 61,973,894 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1361,958,652 - 61,973,971 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11361,558,985 - 61,584,534 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01361,050,028 - 61,073,505 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01362,198,644 - 62,224,209 (+)NCBIUU_Cfam_GSD_1.0
Npffr2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528514,540,862 - 14,612,269 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365982,992,780 - 3,003,355 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365982,993,845 - 3,063,891 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NPFFR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl868,572,578 - 68,643,756 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1868,572,164 - 68,643,394 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2872,528,102 - 72,559,432 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NPFFR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1720,552,443 - 20,664,818 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl720,646,369 - 20,664,578 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660842,149,982 - 2,168,443 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Npffr2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046248903,562,775 - 3,581,448 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in NPFFR2
28 total Variants

Clinical Variants
Name Type Condition(s) Position(s) Clinical significance
GRCh38/hg38 4q13.3(chr4:70675977-72158855)x3 copy number gain See cases [RCV000051601] Chr4:70675977..72158855 [GRCh38]
Chr4:71541694..73024572 [GRCh37]
Chr4:71760558..73243436 [NCBI36]
Chr4:4q13.3		 uncertain significance
GRCh38/hg38 4q13.3(chr4:70727833-72040353)x3 copy number gain See cases [RCV000051602] Chr4:70727833..72040353 [GRCh38]
Chr4:71593550..72906070 [GRCh37]
Chr4:71812414..73124934 [NCBI36]
Chr4:4q13.3		 uncertain significance
GRCh38/hg38 4q13.3-21.21(chr4:71128874-78099088)x3 copy number gain See cases [RCV000051774] Chr4:71128874..78099088 [GRCh38]
Chr4:71994591..79020242 [GRCh37]
Chr4:72213455..79239266 [NCBI36]
Chr4:4q13.3-21.21		 pathogenic
GRCh38/hg38 4q12-22.3(chr4:51831622-97505618)x3 copy number gain See cases [RCV000051772] Chr4:51831622..97505618 [GRCh38]
Chr4:52697788..98426769 [GRCh37]
Chr4:52392545..98645792 [NCBI36]
Chr4:4q12-22.3		 pathogenic
GRCh38/hg38 4q13.2-21.23(chr4:67869564-85517308)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053294]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053294]|See cases [RCV000053294] Chr4:67869564..85517308 [GRCh38]
Chr4:68735282..86438461 [GRCh37]
Chr4:68417877..86657485 [NCBI36]
Chr4:4q13.2-21.23		 pathogenic
GRCh38/hg38 4q13.3-21.22(chr4:71079179-81802208)x1 copy number loss Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053295]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053295]|See cases [RCV000053295] Chr4:71079179..81802208 [GRCh38]
Chr4:71944896..82723361 [GRCh37]
Chr4:72163760..82942385 [NCBI36]
Chr4:4q13.3-21.22		 pathogenic
GRCh38/hg38 4q13.1-13.3(chr4:65454562-72313693)x1 copy number loss See cases [RCV000053293] Chr4:65454562..72313693 [GRCh38]
Chr4:66320280..73179410 [GRCh37]
Chr4:66002875..73398274 [NCBI36]
Chr4:4q13.1-13.3		 pathogenic
NM_001144756.1(NPFFR2):c.3-21868C>A single nucleotide variant Lung cancer [RCV000095009] Chr4:72106717 [GRCh38]
Chr4:72972434 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh38/hg38 4q13.2-13.3(chr4:67799665-74240920)x1 copy number loss See cases [RCV000137622] Chr4:67799665..74240920 [GRCh38]
Chr4:68665383..75106637 [GRCh37]
Chr4:68347978..75325501 [NCBI36]
Chr4:4q13.2-13.3		 likely pathogenic
GRCh38/hg38 4q13.3(chr4:71432026-73648490)x1 copy number loss See cases [RCV000137732] Chr4:71432026..73648490 [GRCh38]
Chr4:72297743..74514207 [GRCh37]
Chr4:72516607..74733071 [NCBI36]
Chr4:4q13.3		 likely pathogenic
GRCh38/hg38 4q13.3(chr4:71367496-72953379)x1 copy number loss See cases [RCV000142982] Chr4:71367496..72953379 [GRCh38]
Chr4:72233213..73819096 [GRCh37]
Chr4:72452077..74037960 [NCBI36]
Chr4:4q13.3		 uncertain significance
GRCh38/hg38 4q13.2-22.3(chr4:68686088-95294456)x3 copy number gain See cases [RCV000143458] Chr4:68686088..95294456 [GRCh38]
Chr4:69551806..96215607 [GRCh37]
Chr4:69234401..96434630 [NCBI36]
Chr4:4q13.2-22.3		 pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:12440-190904441)x3 copy number gain See cases [RCV000446653] Chr4:12440..190904441 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
GRCh37/hg19 4q13.1-21.1(chr4:66017575-76772947)x1 copy number loss See cases [RCV000510445] Chr4:66017575..76772947 [GRCh37]
Chr4:4q13.1-21.1		 pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473) copy number gain See cases [RCV000510453] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
GRCh37/hg19 4q13.3(chr4:72224764-73824383)x1 copy number loss See cases [RCV000510484] Chr4:72224764..73824383 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh37/hg19 4p16.3-q35.2(chr4:68346-190957473)x3 copy number gain See cases [RCV000512241] Chr4:68346..190957473 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
GRCh37/hg19 4q13.1-13.3(chr4:64705501-73469716)x3 copy number gain not provided [RCV000682409] Chr4:64705501..73469716 [GRCh37]
Chr4:4q13.1-13.3		 pathogenic
GRCh37/hg19 4q13.3(chr4:73000885-73003828)x1 copy number loss not provided [RCV000743700] Chr4:73000885..73003828 [GRCh37]
Chr4:4q13.3		 benign
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190915650)x3 copy number gain not provided [RCV000743155] Chr4:49450..190915650 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:49450-190963766)x3 copy number gain not provided [RCV000743156] Chr4:49450..190963766 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
GRCh37/hg19 4p16.3-q35.2(chr4:11525-191028879)x3 copy number gain not provided [RCV000743147] Chr4:11525..191028879 [GRCh37]
Chr4:4p16.3-q35.2		 pathogenic
NM_004885.3(NPFFR2):c.-202C>G single nucleotide variant not provided [RCV000972721] Chr4:72032006 [GRCh38]
Chr4:72897723 [GRCh37]
Chr4:4q13.3		 benign
NM_004885.3(NPFFR2):c.217A>G (p.Asn73Asp) single nucleotide variant not provided [RCV000970837] Chr4:72128808 [GRCh38]
Chr4:72994525 [GRCh37]
Chr4:4q13.3		 benign
GRCh37/hg19 4q13.3-21.23(chr4:72680879-86426232)x1 copy number loss not provided [RCV001005556] Chr4:72680879..86426232 [GRCh37]
Chr4:4q13.3-21.23		 pathogenic
GRCh37/hg19 4q13.2-21.22(chr4:68242784-82991431)x3 copy number gain not provided [RCV000845944] Chr4:68242784..82991431 [GRCh37]
Chr4:4q13.2-21.22		 pathogenic
GRCh37/hg19 4q13.2-21.21(chr4:68950363-79738598)x1 copy number loss not provided [RCV001005553] Chr4:68950363..79738598 [GRCh37]
Chr4:4q13.2-21.21		 pathogenic
GRCh37/hg19 4q13.3-21.1(chr4:71561780-78304341)x1 copy number loss not provided [RCV000846231] Chr4:71561780..78304341 [GRCh37]
Chr4:4q13.3-21.1		 pathogenic
NM_004885.3(NPFFR2):c.388G>A (p.Ala130Thr) single nucleotide variant not provided [RCV000910261] Chr4:72138099 [GRCh38]
Chr4:73003816 [GRCh37]
Chr4:4q13.3		 likely benign
NM_004885.3(NPFFR2):c.443T>C (p.Val148Ala) single nucleotide variant not provided [RCV000956224] Chr4:72146992 [GRCh38]
Chr4:73012709 [GRCh37]
Chr4:4q13.3		 benign
GRCh37/hg19 4q13.3(chr4:72834889-73561412)x3 copy number gain not provided [RCV001005557] Chr4:72834889..73561412 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh37/hg19 4q13.3-21.3(chr4:71412409-87920784)x1 copy number loss See cases [RCV001263040] Chr4:71412409..87920784 [GRCh37]
Chr4:4q13.3-21.3		 pathogenic
GRCh38/hg38 4q12-21.1(chr4:51891814-76009719)x1 copy number loss Piebaldism [RCV001420508] Chr4:51891814..76009719 [GRCh38]
Chr4:4q12-21.1		 pathogenic
GRCh37/hg19 4q13.1-13.3(chr4:61867555-74711517) copy number loss not specified [RCV002053422] Chr4:61867555..74711517 [GRCh37]
Chr4:4q13.1-13.3		 pathogenic
GRCh37/hg19 4q13.3(chr4:72998352-73320894)x3 copy number gain not provided [RCV001827806] Chr4:72998352..73320894 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh37/hg19 4q12-31.21(chr4:52866944-143582507)x3 copy number gain not provided [RCV001827738] Chr4:52866944..143582507 [GRCh37]
Chr4:4q12-31.21		 pathogenic
NC_000004.12:g.67833055_82716065del deletion See cases [RCV003313802] Chr4:67833055..82716065 [GRCh38]
Chr4:4q13.2-21.22		 pathogenic
NM_004885.3(NPFFR2):c.1192A>C (p.Ser398Arg) single nucleotide variant not specified [RCV004187226] Chr4:72147741 [GRCh38]
Chr4:73013458 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.325G>A (p.Ala109Thr) single nucleotide variant not specified [RCV004179141] Chr4:72128916 [GRCh38]
Chr4:72994633 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.178A>G (p.Met60Val) single nucleotide variant not specified [RCV004111118] Chr4:72128769 [GRCh38]
Chr4:72994486 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.1238A>C (p.Glu413Ala) single nucleotide variant not specified [RCV004103131] Chr4:72147787 [GRCh38]
Chr4:73013504 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.1100C>T (p.Ala367Val) single nucleotide variant not specified [RCV004225095] Chr4:72147649 [GRCh38]
Chr4:73013366 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.13T>C (p.Trp5Arg) single nucleotide variant not specified [RCV004164564] Chr4:72128604 [GRCh38]
Chr4:72994321 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.479C>G (p.Ala160Gly) single nucleotide variant not specified [RCV004226576] Chr4:72147028 [GRCh38]
Chr4:73012745 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.2(NPFFR2):c.20C>T (p.Thr7Ile) single nucleotide variant not specified [RCV004179257] Chr4:72031921 [GRCh38]
Chr4:72897638 [GRCh37]
Chr4:4q13.3		 likely benign
NM_004885.3(NPFFR2):c.713T>C (p.Met238Thr) single nucleotide variant not specified [RCV004074069] Chr4:72147262 [GRCh38]
Chr4:73012979 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.-110A>C single nucleotide variant not specified [RCV004226305] Chr4:72032098 [GRCh38]
Chr4:72897815 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.445T>C (p.Tyr149His) single nucleotide variant not specified [RCV004154861] Chr4:72146994 [GRCh38]
Chr4:73012711 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.-77A>T single nucleotide variant not specified [RCV004217430] Chr4:72032131 [GRCh38]
Chr4:72897848 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.144C>G (p.Phe48Leu) single nucleotide variant not specified [RCV004287376] Chr4:72128735 [GRCh38]
Chr4:72994452 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.352T>C (p.Cys118Arg) single nucleotide variant not specified [RCV004344221] Chr4:72138063 [GRCh38]
Chr4:73003780 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.913A>G (p.Asn305Asp) single nucleotide variant not specified [RCV004346896] Chr4:72147462 [GRCh38]
Chr4:73013179 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh37/hg19 4q13.2-13.3(chr4:69146217-75500577)x1 copy number loss not provided [RCV003485422] Chr4:69146217..75500577 [GRCh37]
Chr4:4q13.2-13.3		 pathogenic
NM_004885.3(NPFFR2):c.806A>G (p.Lys269Arg) single nucleotide variant not specified [RCV004490978] Chr4:72147355 [GRCh38]
Chr4:73013072 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.928A>T (p.Ile310Phe) single nucleotide variant not specified [RCV004490979] Chr4:72147477 [GRCh38]
Chr4:73013194 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.184G>A (p.Gly62Arg) single nucleotide variant not specified [RCV004490982] Chr4:72128775 [GRCh38]
Chr4:72994492 [GRCh37]
Chr4:4q13.3		 uncertain significance
GRCh37/hg19 4p12-q35.2(chr4:45455621-191003541)x3 copy number gain not provided [RCV003885507] Chr4:45455621..191003541 [GRCh37]
Chr4:4p12-q35.2		 pathogenic
NM_004885.3(NPFFR2):c.1251C>G (p.Ser417Arg) single nucleotide variant not specified [RCV004490980] Chr4:72147800 [GRCh38]
Chr4:73013517 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.551T>G (p.Val184Gly) single nucleotide variant not specified [RCV004490983] Chr4:72147100 [GRCh38]
Chr4:73012817 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.1175C>A (p.Thr392Asn) single nucleotide variant not specified [RCV004650283] Chr4:72147724 [GRCh38]
Chr4:73013441 [GRCh37]
Chr4:4q13.3		 likely benign
NM_004885.3(NPFFR2):c.268A>C (p.Ser90Arg) single nucleotide variant not specified [RCV004650284] Chr4:72128859 [GRCh38]
Chr4:72994576 [GRCh37]
Chr4:4q13.3		 uncertain significance
NM_004885.3(NPFFR2):c.215G>A (p.Arg72Lys) single nucleotide variant not specified [RCV004650285] Chr4:72128806 [GRCh38]
Chr4:72994523 [GRCh37]
Chr4:4q13.3		 uncertain significance
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:836
Count of miRNA genes:475
Interacting mature miRNAs:512
Transcripts:ENST00000308744, ENST00000344413, ENST00000358749, ENST00000395999, ENST00000506359
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCh38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
407055537GWAS704513_Hlevel of Sphingomyelin (d40:1) in blood serum QTL GWAS704513 (human)1e-10level of Sphingomyelin (d40:1) in blood serum47208869872088699Human
407256883GWAS905859_Hgallbladder neoplasm QTL GWAS905859 (human)3e-08gallbladder neoplasm47214473272144733Human
407096196GWAS745172_Hvitamin D measurement QTL GWAS745172 (human)8e-10vitamin D measurement47210903172109032Human
407027016GWAS675992_Hvitamin D measurement, COVID-19 QTL GWAS675992 (human)2e-10vitamin D measurement, COVID-1947205562272055623Human
407243804GWAS892780_Hserum metabolite measurement QTL GWAS892780 (human)0.000007serum metabolite measurement47208734472087345Human
407268093GWAS917069_Hvitamin D deficiency QTL GWAS917069 (human)0.000002vitamin D deficiency47203269972032700Human
407164570GWAS813546_Hlipid measurement QTL GWAS813546 (human)0.000003lipid measurementblood lipid measurement (CMO:0000050)47204981472049815Human
407238315GWAS887291_Hbody height QTL GWAS887291 (human)4e-11body height (VT:0001253)body height (CMO:0000106)47212670272126703Human
406925966GWAS574942_Hvitamin D measurement QTL GWAS574942 (human)2e-28vitamin D measurement47205436872054369Human

Markers in Region
SHGC-51038  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37472,919,100 - 72,919,443UniSTSGRCh37
Build 36473,137,964 - 73,138,307RGDNCBI36
Celera470,275,482 - 70,275,863RGD
Cytogenetic Map4q21UniSTS
HuRef468,724,060 - 68,724,403UniSTS
TNG Radiation Hybrid Map440304.0UniSTS
SHGC-50585  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37472,973,710 - 72,973,801UniSTSGRCh37
Build 36473,192,574 - 73,192,665RGDNCBI36
Celera470,329,814 - 70,329,905RGD
Cytogenetic Map4q21UniSTS
HuRef468,778,341 - 68,778,432UniSTS
TNG Radiation Hybrid Map440364.0UniSTS
G33309  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37472,919,292 - 72,919,464UniSTSGRCh37
Build 36473,138,156 - 73,138,328RGDNCBI36
Celera470,275,712 - 70,275,884RGD
Cytogenetic Map4q21UniSTS
HuRef468,724,252 - 68,724,424UniSTS
GPR74_2132  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37473,013,083 - 73,013,929UniSTSGRCh37
Build 36473,231,947 - 73,232,793RGDNCBI36
Celera470,368,986 - 70,369,832RGD
HuRef468,817,885 - 68,818,731UniSTS
D4S3201  
Human AssemblyChrPosition (strand)SourceJBrowse
GRCh37472,973,602 - 72,973,754UniSTSGRCh37
Build 36473,192,466 - 73,192,618RGDNCBI36
Celera470,329,706 - 70,329,858RGD
Cytogenetic Map4q21UniSTS
HuRef468,778,233 - 68,778,385UniSTS
D8S2279  
Human AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map21q22.12UniSTS
Cytogenetic Map15q13UniSTS
Cytogenetic Map9q32UniSTS
Cytogenetic Map15q22.3UniSTS
Cytogenetic Map17p12UniSTS
Cytogenetic Map21q21.3UniSTS
Cytogenetic Map3p22-p21.3UniSTS
Cytogenetic Map1q21.1UniSTS
Cytogenetic Map2q24.2UniSTS
Cytogenetic Map17q24.2UniSTS
Cytogenetic Map1q32UniSTS
Cytogenetic Map3p25.3UniSTS
Cytogenetic Map20q13.3UniSTS
Cytogenetic Map2q31.1UniSTS
Cytogenetic Map1q21UniSTS
Cytogenetic Map3p14.1UniSTS
Cytogenetic Map2q37.3UniSTS
Cytogenetic Map7p14.1UniSTS
Cytogenetic Map2q22.3UniSTS
Cytogenetic Map15q13.2UniSTS
Cytogenetic Map12q24.1UniSTS
Cytogenetic Map7p15.2UniSTS
Cytogenetic Map5q31.2UniSTS
Cytogenetic Map2p25.2UniSTS
Cytogenetic Map3p24.3UniSTS
Cytogenetic Map17q25.3UniSTS
Cytogenetic Map15q22.31UniSTS
Cytogenetic Map5q14UniSTS
Cytogenetic Map5q31UniSTS
Cytogenetic Map1p36.32UniSTS
Cytogenetic Map1q42.12UniSTS
Cytogenetic Map7q21.11UniSTS
Cytogenetic Map9q34.2UniSTS
Cytogenetic Map19q13.3UniSTS
Cytogenetic Map22q13.33UniSTS
Cytogenetic Map8q22.3UniSTS
Cytogenetic Map6p21.1-p12UniSTS
Cytogenetic Map1p36.13UniSTS
Cytogenetic Map7q36.3UniSTS
Cytogenetic Map2p25.1UniSTS
Cytogenetic Map7p21.3UniSTS
Cytogenetic Map4q12UniSTS
Cytogenetic Map22q11.22UniSTS
Cytogenetic Map11p13UniSTS
Cytogenetic Map1q12UniSTS
Cytogenetic Map8p23UniSTS
Cytogenetic Map11q13.2-q13.3UniSTS
Cytogenetic Map13q14.1-q14.3UniSTS
Cytogenetic Map3q22-q24UniSTS
Cytogenetic Map3q13.1-q13.2UniSTS
Cytogenetic Map16q24UniSTS
Cytogenetic Map5q23.3-q31.1UniSTS
Cytogenetic Map8p21.3UniSTS
Cytogenetic Map14q32.3UniSTS
Cytogenetic Map7q11.23UniSTS
Cytogenetic Map7q32UniSTS
Cytogenetic Map14q32.33UniSTS
Cytogenetic Map19p13.2UniSTS
Cytogenetic Map9q34.3UniSTS
Cytogenetic Map1p32.3UniSTS
Cytogenetic Map17q11UniSTS
Cytogenetic Map17p13.1-p12UniSTS
Cytogenetic Map18q21.33UniSTS
Cytogenetic Map19p13.12UniSTS
Cytogenetic Map5q14.1UniSTS
Cytogenetic Map14q24.3UniSTS
Cytogenetic Map1q21-q23UniSTS
Cytogenetic MapXp11.23UniSTS
Cytogenetic Map4q21.1UniSTS
Cytogenetic Map12q13.13UniSTS
Cytogenetic Map14q23.3UniSTS
Cytogenetic Map17p12-p11.2UniSTS
Cytogenetic Map6p21.1UniSTS
Cytogenetic Map1q24UniSTS
Cytogenetic Map1q43UniSTS
Cytogenetic Map9q34.13UniSTS
Cytogenetic Map19q13.4UniSTS
Cytogenetic Map2q32UniSTS
Cytogenetic MapXp22.2UniSTS
Cytogenetic Map19p13.11UniSTS
Cytogenetic Map2q33UniSTS
Cytogenetic Map10p13UniSTS
Cytogenetic Map2q11.2UniSTS
Cytogenetic Map3q27UniSTS
Cytogenetic Map17q25.1UniSTS
Cytogenetic Map4p16.1UniSTS
Cytogenetic Map14q22.3UniSTS
Cytogenetic Map10q23-q24UniSTS
Cytogenetic Map2q37.1UniSTS
Cytogenetic Map17q12UniSTS
Cytogenetic Map14q31-q32UniSTS
Cytogenetic Map5p15.33UniSTS
Cytogenetic Map1q23.2UniSTS
Cytogenetic Map16q24.3UniSTS
Cytogenetic Map4p14UniSTS
Cytogenetic Map2q32.3UniSTS
Cytogenetic Map15q21.1UniSTS
Cytogenetic Map4q32.2UniSTS
Cytogenetic Map10q23UniSTS
Cytogenetic Map5q14.2UniSTS
Cytogenetic Map4q32.1UniSTS
Cytogenetic Map1q25.1UniSTS
Cytogenetic Map11q14.1UniSTS
Cytogenetic Map4p16.3UniSTS
Cytogenetic Map1p34.2UniSTS
Cytogenetic Map11q23.1UniSTS
Cytogenetic Map3p21.1UniSTS
Cytogenetic Map16q22.2UniSTS
Cytogenetic Map14q32.31UniSTS
Cytogenetic Map16q11.2UniSTS
Cytogenetic Map6q22UniSTS
Cytogenetic Map10p15.3UniSTS
Cytogenetic Map11q23UniSTS
Cytogenetic Map22q13.2UniSTS
Cytogenetic Map12q12UniSTS
Cytogenetic Map19q13.42UniSTS
Cytogenetic Map19q13.11UniSTS
Cytogenetic Map12q24.31UniSTS
Cytogenetic Map15q15UniSTS
Cytogenetic Map2q33.1UniSTS
Cytogenetic Map22q12.3UniSTS
Cytogenetic Map20q11UniSTS
Cytogenetic Map22q11.23UniSTS
Cytogenetic Map17q25UniSTS
Cytogenetic Map1p13.3UniSTS
Cytogenetic Map3p22.1UniSTS
Cytogenetic Map8q22.1UniSTS
Cytogenetic Map16q22.1UniSTS
Cytogenetic Map18p11.31UniSTS
Cytogenetic Map19p12UniSTS
Cytogenetic Map11q13.1UniSTS
Cytogenetic Map19p13.3UniSTS
Cytogenetic Map2p22.1UniSTS
Cytogenetic Map16p13.3UniSTS
Cytogenetic Map1p35.2UniSTS
Cytogenetic MapYp11.2UniSTS
Cytogenetic Map13q13.1UniSTS
Cytogenetic Map20q11.22UniSTS
Cytogenetic Map19q13.2UniSTS
Cytogenetic Map18q12UniSTS
Cytogenetic Map17q21.33UniSTS
Cytogenetic Map15q15.1UniSTS
Cytogenetic Map3q27.2UniSTS
Cytogenetic Map3q21.3UniSTS
Cytogenetic Map5p15.2UniSTS
Cytogenetic Map20q13.12UniSTS
Cytogenetic Map17q21UniSTS
Cytogenetic Map1q42UniSTS
Cytogenetic Map14q32.11UniSTS
Cytogenetic Map17q21.2-q21.3UniSTS
Cytogenetic Map5q32-q34UniSTS
Cytogenetic Map15q14UniSTS
Cytogenetic Map16q13UniSTS
Cytogenetic Map3q21.2UniSTS
Cytogenetic Map3p21.3UniSTS
Cytogenetic Map14q24.2UniSTS
Cytogenetic Map12q24.13UniSTS
Cytogenetic Map13q14.11UniSTS
Cytogenetic Map3q27.3UniSTS
Cytogenetic Map1q32.3UniSTS
Cytogenetic Map6p22.1UniSTS
Cytogenetic Map9q34.11UniSTS
Cytogenetic Map6q21UniSTS
Cytogenetic Map6q25.3UniSTS
Cytogenetic Map2p11.2UniSTS
Cytogenetic Map13q14.3UniSTS
Cytogenetic Map17q11.2UniSTS
Cytogenetic Map10p12UniSTS
Cytogenetic Map2q33.3UniSTS
Cytogenetic Map14q21.3UniSTS
Cytogenetic Map8p22-p21UniSTS
Cytogenetic Map18q11.2UniSTS
Cytogenetic Map2p15UniSTS
Cytogenetic Map17q22UniSTS
Cytogenetic Map12q21.33UniSTS
Cytogenetic Map20q13.32UniSTS
Cytogenetic Map1p34.1UniSTS
Cytogenetic Map10q26UniSTS
Cytogenetic Map8p23.1UniSTS
Cytogenetic Map19p13UniSTS
Cytogenetic Map7q21.13UniSTS
Cytogenetic Map7q31.1UniSTS
Cytogenetic Map1p33UniSTS
Cytogenetic Map21q22.3UniSTS
Cytogenetic Map1p35.1UniSTS
Cytogenetic Map22q12.2UniSTS
Cytogenetic Map9q22.3UniSTS
Cytogenetic Map8q13.1UniSTS
Cytogenetic Map3q25UniSTS
Cytogenetic Map1p36.33UniSTS
Cytogenetic Map20q13.33UniSTS
Cytogenetic Map1p31.3UniSTS
Cytogenetic Map14q31.1UniSTS
Cytogenetic Map22q13.1UniSTS
Cytogenetic Map12q13.2UniSTS
Cytogenetic Map22q13.31-q13.33UniSTS
Cytogenetic Map20q13.31UniSTS
Cytogenetic Map11p11.2UniSTS
Cytogenetic Map1q41UniSTS
Cytogenetic Map1p36.11UniSTS
Cytogenetic Map15q25.2UniSTS
Cytogenetic Map14q11.2UniSTS
Cytogenetic Map17q23.2UniSTS
Cytogenetic Map7q32.2UniSTS
Cytogenetic Map19q13.12UniSTS
Cytogenetic Map1q32.1UniSTS
Cytogenetic Map6q25.1UniSTS
Cytogenetic Map19q13.43UniSTS
Cytogenetic Map9p13.3UniSTS
Cytogenetic Map16p11.2UniSTS
Cytogenetic Map2p13.1UniSTS
Cytogenetic Map22q11.21UniSTS
Cytogenetic Map3q29UniSTS
Cytogenetic Map7p13UniSTS
Cytogenetic Map11q23.3UniSTS
Cytogenetic Map14q31-q32.1UniSTS
Cytogenetic Map1q42.11UniSTS
Cytogenetic Map4q35.1UniSTS
Cytogenetic Map2p23.3UniSTS
Cytogenetic Map2p13.3UniSTS
Cytogenetic MapXp11.3UniSTS
Cytogenetic Map2q11.2-q12.1UniSTS
Cytogenetic Map20q13.13UniSTS
Cytogenetic Map1p22UniSTS
Cytogenetic Map6q16.2UniSTS
Cytogenetic Map18q23UniSTS
Cytogenetic Map2q14UniSTS
Cytogenetic Map20p11.23-p11.21UniSTS
Cytogenetic Map16p12.2UniSTS
Cytogenetic Map8p11.23UniSTS
Cytogenetic Map19q13.1UniSTS
Cytogenetic Map19q13UniSTS
Cytogenetic Map8p11.21UniSTS
Cytogenetic Map12q14.3UniSTS
Cytogenetic MapXq26.3UniSTS
Cytogenetic Map8q24.11UniSTS
Cytogenetic Map10q23.1UniSTS
Cytogenetic Map1q44UniSTS
Cytogenetic Map9q22.33UniSTS
Cytogenetic Map3p21.31UniSTS
Cytogenetic Map17p13.2UniSTS
Cytogenetic Map9q21.32UniSTS
Cytogenetic Map7q34UniSTS
Cytogenetic Map9q33.3UniSTS
Cytogenetic Map1p36.1UniSTS
Cytogenetic Map20q12UniSTS
Cytogenetic Map4q21.23UniSTS
Cytogenetic Map5q13.2UniSTS
Cytogenetic Map22q12.1UniSTS
Cytogenetic Map5q31.1UniSTS
Cytogenetic Map2q21.3UniSTS
Cytogenetic Map7q21.2UniSTS
Cytogenetic Map17q22.2UniSTS
Cytogenetic Map17p13UniSTS
Cytogenetic Map12q24.11UniSTS
Cytogenetic Map18q21UniSTS
Cytogenetic Map10q11.1UniSTS
Cytogenetic Map22q11.2UniSTS
Cytogenetic Map19q12UniSTS
Cytogenetic Map7q34-q35UniSTS
Cytogenetic Map15q24.1UniSTS
Cytogenetic Map18p11.21UniSTS
Cytogenetic Map1q23.1UniSTS
Cytogenetic Map19q13.41UniSTS
Cytogenetic Map6p25.1-p23UniSTS
Cytogenetic Map11p15.4UniSTS
Cytogenetic Map10q22UniSTS
Cytogenetic Map5q35.3UniSTS
Cytogenetic Map18q12.1-q21.1UniSTS
Cytogenetic Map12p13.1UniSTS
Cytogenetic Map13q12.1UniSTS
Cytogenetic Map12q15UniSTS
Cytogenetic Map6p21.32UniSTS
Cytogenetic Map8q24.3UniSTS
Cytogenetic Map10p14UniSTS
Cytogenetic Map12p13.1-p12.3UniSTS
Cytogenetic Map3p25.2UniSTS
Cytogenetic Map6p21.33UniSTS
Cytogenetic Map6p21.3UniSTS
Cytogenetic Map3p21.2UniSTS
Cytogenetic Map10q26.3UniSTS
Cytogenetic Map1q21.3UniSTS
Cytogenetic MapXp21.2UniSTS
Cytogenetic Map7q22.1UniSTS
Cytogenetic Map14q12UniSTS
Cytogenetic Map8p11.22UniSTS
Cytogenetic Map19q13.32UniSTS
Cytogenetic Map2q21.1UniSTS
Cytogenetic Map9q21.12UniSTS
Cytogenetic Map15q23UniSTS
Cytogenetic Map7p22.2UniSTS
Cytogenetic Map8p21.2UniSTS
Cytogenetic Map7q33UniSTS
Cytogenetic Map15q15.3UniSTS
Cytogenetic Map4q21.22UniSTS
Cytogenetic Map12q13.12UniSTS
Cytogenetic Map10q24.31UniSTS
Cytogenetic Map12p13.31UniSTS
Cytogenetic Map14q32.12UniSTS
Cytogenetic Map10q24.32UniSTS
Cytogenetic Map11q12.3UniSTS
Cytogenetic Map16p12.3UniSTS
Cytogenetic Map1p34.3UniSTS
Cytogenetic Map1p36.21UniSTS
Cytogenetic Map2q24.3UniSTS
Cytogenetic Map2q33.2UniSTS
Cytogenetic Map16q24.1UniSTS
Cytogenetic Map1p31.1UniSTS
Cytogenetic Map19q13.33UniSTS
Cytogenetic Map1p36.31UniSTS
Cytogenetic Map3q13.31UniSTS
Cytogenetic Map15q22.2UniSTS
Cytogenetic Map5q32UniSTS
Cytogenetic Map6q13UniSTS
Cytogenetic MapXq24UniSTS
Cytogenetic Map6q25UniSTS
Cytogenetic Map6p21UniSTS
Cytogenetic Map2q35UniSTS
Cytogenetic Map12p13-p12UniSTS
Cytogenetic Map9p13.2UniSTS
Cytogenetic Map6p22UniSTS
Cytogenetic Map2q12.1UniSTS
Cytogenetic Map17p13.3UniSTS
Cytogenetic Map9q22.2UniSTS
Cytogenetic Map1q22UniSTS
Cytogenetic Map1p22.1UniSTS
Cytogenetic Map1p36UniSTS
Cytogenetic Map9q13-q21UniSTS
Cytogenetic Map11p15.5UniSTS
Cytogenetic MapXp11.2UniSTS
Cytogenetic Map19pUniSTS
Cytogenetic Map19p13.1-p12UniSTS
Cytogenetic Map7q22UniSTS
Cytogenetic Map12q24.33UniSTS
Cytogenetic Map3q21UniSTS
Cytogenetic Map8q24UniSTS
Cytogenetic Map18p11.31-p11.21UniSTS
Cytogenetic Map11p15.3-p15.1UniSTS
Cytogenetic Map11q13UniSTS
Cytogenetic Map8q22UniSTS
Cytogenetic Map4p15.1UniSTS
Cytogenetic Map1q25.2UniSTS
Cytogenetic Map2p16.3UniSTS
Cytogenetic Map16p13.12UniSTS
Cytogenetic Map7p21.2UniSTS
Cytogenetic Map12q21.1UniSTS
Cytogenetic Map2p14UniSTS
Cytogenetic Map6q24.3UniSTS
Cytogenetic Map10q22.2UniSTS
Cytogenetic Map5q23.1UniSTS
Cytogenetic Map10q23.2UniSTS
Cytogenetic Map7p22.3UniSTS
Cytogenetic Map21q22.2UniSTS
Cytogenetic Map6q22.1UniSTS
Cytogenetic Map1q42.1UniSTS
Cytogenetic Map1q25UniSTS
Cytogenetic Map6p22.3UniSTS
Cytogenetic Map1q21.2UniSTS
Cytogenetic Map15q22.1UniSTS
Cytogenetic Map12p13.2UniSTS
Cytogenetic Map12q22UniSTS
Cytogenetic Map3p21-p12UniSTS
Cytogenetic Map4q35UniSTS
Cytogenetic Map1p34-p33UniSTS
Cytogenetic Map21q22.11UniSTS
Cytogenetic Map3p22-p21.33UniSTS
Cytogenetic Map3q23UniSTS
Cytogenetic Map3q22.1UniSTS
Cytogenetic Map8q21.11UniSTS
Cytogenetic MapXq22.3UniSTS
Cytogenetic Map7p14UniSTS
Cytogenetic Map17q21.1UniSTS
Cytogenetic Map15q21UniSTS
Cytogenetic Map1q42.3UniSTS
Cytogenetic Map9q22UniSTS
Cytogenetic Map2q12.3UniSTS
Cytogenetic Map20q11.2-q13.2UniSTS
Cytogenetic Map17q21.31UniSTS
Cytogenetic Map17q24UniSTS
Cytogenetic Map3q25.31UniSTS
Cytogenetic Map6p24.3UniSTS
Cytogenetic Map2q31.3UniSTS
Cytogenetic Map1q31UniSTS
Cytogenetic Map7q32-q33UniSTS
Cytogenetic Map7q21.1UniSTS
Cytogenetic Map14q23-q24.2UniSTS
Cytogenetic Map19q13.3-q13.4UniSTS
Cytogenetic Map2p24-p21UniSTS
Cytogenetic Map15q11.2UniSTS
Cytogenetic Map15q26.3UniSTS
Cytogenetic Map7p22UniSTS
Cytogenetic Map12p11UniSTS
Cytogenetic Map1p35.3UniSTS
Cytogenetic Map1p12UniSTS
Cytogenetic Map13q32.3UniSTS
Cytogenetic Map5q23.3UniSTS
Cytogenetic Map20q13UniSTS
Cytogenetic Map17q25.2UniSTS
Cytogenetic Map7q36.1UniSTS
Cytogenetic Map10p12.33UniSTS
Cytogenetic Map17q21.32UniSTS
Cytogenetic MapXp11.22UniSTS
Cytogenetic Map12p13.3UniSTS
Cytogenetic MapXq25-q26UniSTS
Cytogenetic Map2q36.1UniSTS
Cytogenetic Map5p13UniSTS
Cytogenetic Map15q25UniSTS
Cytogenetic Map5q12.1UniSTS
Cytogenetic Map5p12UniSTS
Cytogenetic Map1p36.22UniSTS
Cytogenetic Map3q26.31UniSTS
Cytogenetic Map17q22-q23UniSTS
Cytogenetic MapXp22.33UniSTS
Cytogenetic MapYp11.3UniSTS
Cytogenetic Map17p11.2UniSTS
Cytogenetic MapXq13.2UniSTS
Cytogenetic Map12q23.1UniSTS
Cytogenetic Map16q12.2UniSTS
Cytogenetic Map3q26.32UniSTS
Cytogenetic Map6q22.31UniSTS
Cytogenetic Map3q26.2-q27UniSTS
Cytogenetic Map1q25.1-q25.2UniSTS
Cytogenetic Map14q24UniSTS
Cytogenetic Map9q21.13UniSTS
Cytogenetic Map10q11.22UniSTS
Cytogenetic Map22q13.31UniSTS
Cytogenetic Map3p25.1UniSTS
Cytogenetic Map5q21.3UniSTS
Cytogenetic Map5p13.3UniSTS
Cytogenetic Map10q22.1UniSTS
Cytogenetic Map14q12-q13UniSTS
Cytogenetic MapXp22UniSTS
Cytogenetic MapXq23UniSTS
Cytogenetic Map20p12.3-p11.21UniSTS
Cytogenetic Map2p21UniSTS
Cytogenetic Map17q11.2-q12UniSTS
Cytogenetic Map4q32-q34UniSTS
Cytogenetic MapXq25-q26.1UniSTS
Cytogenetic Map2p25-p24UniSTS
Cytogenetic Map2p25UniSTS
Cytogenetic Map11q13.2UniSTS
Cytogenetic MapXp22.2-p22.1UniSTS
Cytogenetic MapXq22.1UniSTS
Cytogenetic Map4q25UniSTS
Cytogenetic Map3p24.2UniSTS
Cytogenetic Map22q13UniSTS
Cytogenetic Map20q11.22-q12UniSTS
Cytogenetic Map4q34.2UniSTS
Cytogenetic Map20p13UniSTS
Cytogenetic Map22q13.1-q13.2UniSTS
Cytogenetic MapXq28UniSTS
Cytogenetic Map12q13-q14UniSTS
Cytogenetic Map6q14.1UniSTS
Cytogenetic Map12q13.3UniSTS
Cytogenetic Map9q31.2UniSTS
Cytogenetic Map11q13.1-q13.2UniSTS
Cytogenetic Map12q13UniSTS
Cytogenetic Map1p32-p31UniSTS
Cytogenetic Map21q21.2UniSTS
Cytogenetic Map10q24.3UniSTS
Cytogenetic Map16q21UniSTS
Cytogenetic Map8q21.1UniSTS
Cytogenetic Map5p13.2UniSTS
Cytogenetic Map1p34UniSTS
Cytogenetic Map1q32.2UniSTS
Cytogenetic Map4q21.3UniSTS
Cytogenetic Map7q21-q22UniSTS
Cytogenetic Map3q26.2UniSTS
Cytogenetic Map2q36.3UniSTS
Cytogenetic Map8p22UniSTS
Cytogenetic Map11q22.1UniSTS
Cytogenetic Map3q25.33UniSTS
Cytogenetic Map10q23.31UniSTS
Cytogenetic Map4p15.32UniSTS
Cytogenetic Map18q12.2UniSTS
Cytogenetic Map15q15.2UniSTS
Cytogenetic Map5q12.3UniSTS
Cytogenetic Map14q24.1UniSTS
Cytogenetic Map12q14.1UniSTS
Cytogenetic Map6p22.3-p22.1UniSTS
Cytogenetic Map7p11.2UniSTS
Cytogenetic Map6q15UniSTS
Cytogenetic Map6q23.3UniSTS
Cytogenetic Map13q14UniSTS
Cytogenetic Map5q35.2UniSTS
Cytogenetic Map10q22.3UniSTS
Cytogenetic Map1p35UniSTS
Cytogenetic Map3q12.3UniSTS
Cytogenetic Map19q13.31UniSTS
Cytogenetic Map8q23.1UniSTS
Cytogenetic Map6q27UniSTS
Cytogenetic Map2q14.3UniSTS
Cytogenetic MapXp11UniSTS
Cytogenetic Map11p15.3UniSTS
Cytogenetic Map20p12UniSTS
Cytogenetic Map15q13.1UniSTS
Cytogenetic MapXp22.3UniSTS
Cytogenetic Map11q13.5UniSTS
Cytogenetic Map19p13.3-p13.2UniSTS
Cytogenetic Map1p36.11-p34.2UniSTS
Cytogenetic Map4q22.1-q23UniSTS
Cytogenetic Map7q22.3UniSTS
Cytogenetic Map9p22UniSTS
Cytogenetic Map17q23.3UniSTS
Cytogenetic Map16q23.2UniSTS
Cytogenetic Map2p16.1UniSTS
Cytogenetic Map3q27.1UniSTS
Cytogenetic Map2p22.3UniSTS
Cytogenetic MapXq26.1UniSTS
Cytogenetic Map4q21.21UniSTS
Cytogenetic Map22q13.3UniSTS
Cytogenetic Map2q32.1UniSTS
Cytogenetic MapYp11.32UniSTS
Cytogenetic Map11p14UniSTS
Cytogenetic Map1p32.1UniSTS
Cytogenetic Map2p25.3UniSTS
Cytogenetic Map4q34.3UniSTS
Cytogenetic Map9p12UniSTS
Cytogenetic Map3q13.13UniSTS
Cytogenetic Map13q34UniSTS
Cytogenetic Map3p21UniSTS
Cytogenetic Map11q23.2UniSTS
Cytogenetic Map20p11.23UniSTS
Cytogenetic Map3p13UniSTS
Cytogenetic Map4p13UniSTS
Cytogenetic Map16q23.1UniSTS
Cytogenetic Map10p11.23UniSTS
Cytogenetic Map8p21.1UniSTS
Cytogenetic Map15q22-q24UniSTS
Cytogenetic Map8q23UniSTS
Cytogenetic Map16q12.1UniSTS
Cytogenetic Map14q13.2UniSTS
Cytogenetic Map18q12.1UniSTS
Cytogenetic Map5q31.3UniSTS
Cytogenetic Map11q14UniSTS
Cytogenetic Map13q33.1UniSTS
Cytogenetic Map14q21.2UniSTS
Cytogenetic Map4q31.3UniSTS
Cytogenetic Map15q21-q22UniSTS
Cytogenetic Map3p14.3UniSTS
Cytogenetic Map17p13.1UniSTS
Cytogenetic Map13q12.11UniSTS
Cytogenetic Map6p21.2UniSTS
Cytogenetic Map15q21.3UniSTS
Cytogenetic Map3q21.1UniSTS
Cytogenetic Map6p21.31UniSTS
Cytogenetic Map10p15.1UniSTS
Cytogenetic Map1q24.2UniSTS
Cytogenetic Map12p12UniSTS
Cytogenetic Map7p22.1UniSTS
Cytogenetic Map11q24UniSTS
Cytogenetic Map21q22.13UniSTS
Cytogenetic Map15q22.1-q22.31UniSTS
Cytogenetic Map15q22UniSTS
Cytogenetic MapXq13UniSTS
Cytogenetic Map1q31-q41UniSTS
Cytogenetic Map6p25UniSTS
Cytogenetic Map14q32.1UniSTS
Cytogenetic Map16q12-q13UniSTS
Cytogenetic MapXq12-q13UniSTS
Cytogenetic Map14q23UniSTS
Cytogenetic Map12q11-q12UniSTS
Cytogenetic Map1q42.1-q43UniSTS
Cytogenetic Map3q13.33UniSTS
Cytogenetic Map7q31UniSTS
Cytogenetic Map12q24UniSTS
Cytogenetic MapXp22.11UniSTS
Cytogenetic Map11q13.4UniSTS
Cytogenetic Map2p25.1-p24.1UniSTS
Cytogenetic Map8q24.21UniSTS
Cytogenetic Map12q13.1UniSTS
Cytogenetic Map12q22-q23.1UniSTS
Cytogenetic Map11q12.2UniSTS
Cytogenetic Map1p13.2UniSTS
Cytogenetic Map5q31.2-q34UniSTS
Cytogenetic Map11p15.1UniSTS
Cytogenetic Map6q24.2UniSTS
Cytogenetic Map22qUniSTS
Cytogenetic Map12q13.11-q14.3UniSTS
Cytogenetic Map7p11UniSTS
Cytogenetic MapXp22.12-p22.11UniSTS
Cytogenetic Map7q11.21UniSTS
Cytogenetic Map20q11.22-q11.23UniSTS
Cytogenetic Map8q24.22UniSTS
Cytogenetic Map8p22-p21.3UniSTS
Cytogenetic Map10q24UniSTS
Cytogenetic Map1q21.2-q21.3UniSTS
Cytogenetic Map1p36.12UniSTS
Cytogenetic Map9p24.1UniSTS
Cytogenetic Map6q25.2-q27UniSTS
Cytogenetic Map9q34UniSTS
Cytogenetic Map5p13.1UniSTS
Cytogenetic Map8q11.2UniSTS
Cytogenetic Map3q28-q29UniSTS
Cytogenetic Map7p14-p13UniSTS
Cytogenetic Map12q24.2UniSTS
Cytogenetic Map6p22.2UniSTS
Cytogenetic Map7q22-qterUniSTS
Cytogenetic Map12q24.2-q24.31UniSTS
Cytogenetic MapXq13.1UniSTS
Cytogenetic Map6p25.2UniSTS
Cytogenetic Map1p21UniSTS
Cytogenetic Map1q32.2-q41UniSTS
Cytogenetic Map11q22-q23UniSTS
Cytogenetic Map3q26.33UniSTS
Cytogenetic Map12q23-q24.1UniSTS
Cytogenetic Map5p15.1-p14.3UniSTS
Cytogenetic Map16p13.11UniSTS
Cytogenetic Map6q22-q23UniSTS
Cytogenetic Map9p21UniSTS
Cytogenetic Map6p12.3UniSTS
Cytogenetic Map3p12.1UniSTS
Cytogenetic Map9q21.11UniSTS
Cytogenetic Map17q24.1UniSTS
Cytogenetic Map10q11.21UniSTS
Cytogenetic Map14q21UniSTS
Cytogenetic Map11p15UniSTS
Cytogenetic Map16q22UniSTS
Cytogenetic Map15q11-q13UniSTS
Cytogenetic Map13q12-q14UniSTS
Cytogenetic Map18q21.1UniSTS
Cytogenetic Map2q24UniSTS
Cytogenetic Map12p13UniSTS
Cytogenetic Map3q28UniSTS
Cytogenetic Map7q32.1UniSTS
Cytogenetic MapXq22.2UniSTS
Cytogenetic Map7p12.3UniSTS
Cytogenetic Map7p15.1UniSTS
Cytogenetic Map2q37.2UniSTS
Cytogenetic Map18q22.3UniSTS
Cytogenetic Map14q32.13UniSTS
Cytogenetic Map14q22.1UniSTS
Cytogenetic Map16p13.1UniSTS
Cytogenetic Map7q31.3UniSTS
Cytogenetic Map20q13.2-q13.3UniSTS
Cytogenetic Map1p21.2UniSTS
Cytogenetic Map9q21.33UniSTS
Cytogenetic Map14q32.2UniSTS
Cytogenetic Map13q13.3UniSTS
Cytogenetic Map10p12.31UniSTS
Cytogenetic Map22q11.1UniSTS
Cytogenetic Map5q33.2UniSTS
Cytogenetic Map13q32.2UniSTS
Cytogenetic Map14q23.1UniSTS
Cytogenetic Map8q21.2UniSTS
Cytogenetic Map2q24.1UniSTS
Cytogenetic Map10q26.13UniSTS
Cytogenetic Map2q23.3UniSTS
Cytogenetic Map19p13.1UniSTS
Cytogenetic Map15q14-q15UniSTS
Cytogenetic Map1q42.13UniSTS
Cytogenetic Map14q31UniSTS
Cytogenetic Map7p21.1UniSTS
Cytogenetic Map8p12-p11UniSTS
Cytogenetic Map18p11.2UniSTS
Cytogenetic Map7p11.1UniSTS
Cytogenetic Map1q31-q32UniSTS
Cytogenetic Map2q12UniSTS
Cytogenetic Map3p21.32UniSTS
Cytogenetic Map2p24.2UniSTS
Cytogenetic Map2q33-q34UniSTS
Cytogenetic Map6q24.1UniSTS
Cytogenetic Map4q22.1UniSTS
Cytogenetic Map15q13.3UniSTS
Cytogenetic Map10q26.11UniSTS
Cytogenetic Map7p15.3UniSTS
Cytogenetic Map10q23.33UniSTS
Cytogenetic Map12p12.1UniSTS
Cytogenetic Map7p13-p12UniSTS
Cytogenetic MapXq25UniSTS
Cytogenetic Map17q11-q21UniSTS
Cytogenetic Map12q23UniSTS
Cytogenetic Map6p24-p22.3UniSTS
Cytogenetic Map14q23.2UniSTS
Cytogenetic Map7q31.1-q31.2UniSTS
Cytogenetic Map8q22.2UniSTS
Cytogenetic Map15q21.2UniSTS
Cytogenetic Map3p26.1-p25.1UniSTS
Cytogenetic Map5q35UniSTS
Cytogenetic Map3q13.2UniSTS
Cytogenetic Map4p15.2UniSTS
Cytogenetic Map6q16.3UniSTS
Cytogenetic Map17q24-q25UniSTS
Cytogenetic MapXq12UniSTS
Cytogenetic MapXq27.1UniSTS
Cytogenetic Map8q12.3UniSTS
Cytogenetic Map5q21.2UniSTS
Cytogenetic Map5q15UniSTS
Cytogenetic Map5q35.1UniSTS
Cytogenetic Map4q13.3UniSTS
Cytogenetic Map4q35.2UniSTS
Cytogenetic Map3p26.1UniSTS
Cytogenetic Map3p11.1UniSTS
Cytogenetic Map17q21.2UniSTS
Cytogenetic Map2q21.2UniSTS
Cytogenetic Map19p13.13UniSTS
Cytogenetic Map18q12.3UniSTS
Cytogenetic Map18p11.3UniSTS
Cytogenetic Map17q11.1UniSTS
Cytogenetic Map15q25.1UniSTS
Cytogenetic Map13q12.3UniSTS
Cytogenetic Map12q23.2UniSTS
Cytogenetic Map12q12-q13UniSTS
Cytogenetic Map12q14UniSTS
Cytogenetic Map5q33.1UniSTS
Cytogenetic Map2q32-q34UniSTS
Cytogenetic Map16q22.3UniSTS
Cytogenetic Map2p15-p13UniSTS
Cytogenetic MapXp11.4UniSTS
Cytogenetic Map19q13.33-q13.41UniSTS
Cytogenetic Map20p11UniSTS
Cytogenetic Map6q23-q24UniSTS
Cytogenetic Map2p12UniSTS
Cytogenetic Map2p13UniSTS
Cytogenetic Map13q11-q12UniSTS
Cytogenetic Map6p12.3-p11.2UniSTS
Cytogenetic Map6q16.1-q16.3UniSTS
Cytogenetic Map22q11UniSTS
Cytogenetic Map7q31.2UniSTS
Cytogenetic Map10q21.3UniSTS
Cytogenetic Map3q25.2UniSTS
Cytogenetic Map3p21.1-p14.3UniSTS
Cytogenetic Map6p12.1UniSTS
Cytogenetic Map3q23-q24UniSTS
Cytogenetic Map3q12UniSTS
Cytogenetic Map7q11.1UniSTS
Cytogenetic Map3q22.3UniSTS
Cytogenetic Map7q21.3UniSTS
Cytogenetic Map4q31.1UniSTS
Cytogenetic Map22q12-q13UniSTS
Cytogenetic Map4q23UniSTS
Cytogenetic MapXp22.12UniSTS
Cytogenetic Map6q16.1UniSTS
Cytogenetic Map13q14.13UniSTS
Cytogenetic Map18q21.3UniSTS
Cytogenetic Map9q33.2UniSTS
Cytogenetic Map11q21UniSTS
Cytogenetic Map8q12UniSTS
Cytogenetic Map4q28-q32UniSTS
Cytogenetic Map17q24.3UniSTS
Cytogenetic Map6p23UniSTS
Cytogenetic Map8p11UniSTS
Cytogenetic Map5q34UniSTS
Cytogenetic Map1q24.3UniSTS
Cytogenetic Map9q33.1UniSTS
Cytogenetic Map1q23.3UniSTS
Cytogenetic Map2p16.2UniSTS
Cytogenetic Map9q22.31UniSTS
Cytogenetic Map9p24.3UniSTS
Cytogenetic Map7q35UniSTS
Cytogenetic Map1p36.2UniSTS
Cytogenetic Map11q22.3UniSTS
Cytogenetic Map16p12UniSTS
Cytogenetic Map1q22-q23UniSTS
Cytogenetic Map13q22.1UniSTS
Cytogenetic Map2q12.2UniSTS
Cytogenetic Map8p12UniSTS
Cytogenetic Map4q21UniSTS
Cytogenetic Map13q12.2UniSTS
Cytogenetic Map9q31-q33UniSTS
Cytogenetic Map6p24.1UniSTS
Cytogenetic Map1q23UniSTS
Cytogenetic Map11q12-q13UniSTS
Cytogenetic Map11q13.3UniSTS
Cytogenetic Map11q24.2UniSTS
Cytogenetic Map11q12.1UniSTS
Cytogenetic Map3p26UniSTS
Cytogenetic Map5q13UniSTS
Cytogenetic Map8p21UniSTS
Cytogenetic Map19q13.1-q13.2UniSTS
Cytogenetic Map1p33-p32UniSTS
Cytogenetic Map7q36.2UniSTS
Cytogenetic Map4q32.3UniSTS
Cytogenetic Map16p13.2UniSTS
Cytogenetic Map14q32UniSTS
Cytogenetic Map10q11.23UniSTS
Cytogenetic Map10q26.1UniSTS
Cytogenetic Map9q32-q33.3UniSTS
Cytogenetic Map9q22.1-q22.2UniSTS
Cytogenetic Map3q26.1-q26.2UniSTS
Cytogenetic Map5q31-q34UniSTS
Cytogenetic Map9q33-q34UniSTS
Cytogenetic Map5q11.2-q13.2UniSTS
Cytogenetic Map13q32UniSTS
Cytogenetic Map9q22.32UniSTS
Cytogenetic Map1p36.3UniSTS
Cytogenetic Map1p36.3-p36.2UniSTS
Cytogenetic Map4q28.1UniSTS
Cytogenetic Map5q22UniSTS
Cytogenetic Map12p11.21UniSTS
Cytogenetic MapXq13.3UniSTS
Cytogenetic Map9q31.3UniSTS
Cytogenetic Map3p26.3UniSTS
Cytogenetic Map2q11.1UniSTS
Cytogenetic Map21q11.2UniSTS
Cytogenetic Map18q21.32UniSTS
Cytogenetic Map15q26.2UniSTS
Cytogenetic Map12q24.23UniSTS
Cytogenetic Map10q25.3UniSTS
Cytogenetic Map20q11.23UniSTS
Cytogenetic Map20p12.1UniSTS
Cytogenetic Map2q31.1-q31.2UniSTS
Cytogenetic MapXp22.31UniSTS
Cytogenetic MapXp21.3UniSTS
Cytogenetic Map5q33.3UniSTS
Cytogenetic Map4q28.2UniSTS
Cytogenetic Map3p14.2UniSTS
Cytogenetic Map3q24UniSTS
Cytogenetic Map2q13UniSTS
Cytogenetic Map20q13.2UniSTS
Cytogenetic Map14q11.2-q12UniSTS
Cytogenetic Map3p24UniSTS
Cytogenetic Map12q23.3UniSTS
Cytogenetic Map11q24.3UniSTS
Cytogenetic Map11q14.3UniSTS
Cytogenetic Map10q25.2UniSTS
Cytogenetic Map3q25.1UniSTS
Cytogenetic Map8q13UniSTS
Cytogenetic Map1p22.2UniSTS
Cytogenetic Map3p22.3UniSTS
Cytogenetic Map18q11.1UniSTS
Cytogenetic Map8q23.3UniSTS
Cytogenetic Map15q24UniSTS
Cytogenetic Map11cen-q12UniSTS
Cytogenetic Map11q25UniSTS
Cytogenetic Map3p22.2UniSTS
Cytogenetic MapXp21.1UniSTS
Cytogenetic Map7q36UniSTS
Cytogenetic Map7p14.3UniSTS
Cytogenetic Map12q21UniSTS
Cytogenetic Map7p15UniSTS
Cytogenetic Map7q22-q31UniSTS
Cytogenetic Map11q22UniSTS
Cytogenetic Map5p15.3UniSTS
Cytogenetic Map20q13.3-qterUniSTS
Cytogenetic Map1p35-p34UniSTS
Cytogenetic Map4p13-p12UniSTS
Cytogenetic Map10q21-q22UniSTS
Cytogenetic Map4q22UniSTS
Cytogenetic Map7p13-p11.1UniSTS
Cytogenetic Map9q31-q34UniSTS
Cytogenetic Map7q21.1-q22UniSTS
Cytogenetic Map15q26.1UniSTS
Cytogenetic Map3q13.13-q13.2UniSTS
Cytogenetic MapXp22.13UniSTS
Cytogenetic Map13q12.12UniSTS
Cytogenetic Map13q14.2UniSTS
Cytogenetic Map12qUniSTS
Cytogenetic Map1pUniSTS
Cytogenetic Map16pUniSTS
Cytogenetic Map15qUniSTS
Cytogenetic Map7qUniSTS
Cytogenetic Map2qUniSTS
Cytogenetic Map5q13.1UniSTS
Cytogenetic Map11p14.1UniSTS
Cytogenetic Map4q32UniSTS
Cytogenetic Map2p22UniSTS
Cytogenetic Map5q14.3UniSTS
Cytogenetic Map10p12.1UniSTS
Cytogenetic Map5q23.2UniSTS
Cytogenetic Map2p24.1UniSTS
Cytogenetic Map8q24.13UniSTS
Cytogenetic Map12p13.32UniSTS
Cytogenetic Map9p21.1UniSTS
Cytogenetic Map9q34.2-q34.3UniSTS


Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
appendage
circulatory system
ectoderm
endocrine system
endoderm
entire extraembryonic component
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
musculoskeletal system
nervous system
renal system
reproductive system
respiratory system
sensory system
681 1825 1485 1250 3416 1093 1382 5 262 732 139 1413 3308 3358 39 2717 472 1249 1074 132

Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001144756 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_004885 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_053036 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011531554 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_047449545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348802 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_054348803 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC106051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC106898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF119815 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF236083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF257210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF268899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF330053 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ311393 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK290937 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK308069 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC101636 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC113713 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH471057 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN285250 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CP068274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENST00000308744   ⟹   ENSP00000307822
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl472,032,000 - 72,148,305 (+)Ensembl
Ensembl Acc Id: ENST00000344413   ⟹   ENSP00000340789
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl472,031,902 - 72,147,812 (+)Ensembl
Ensembl Acc Id: ENST00000358749   ⟹   ENSP00000351599
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl472,039,374 - 72,148,061 (+)Ensembl
Ensembl Acc Id: ENST00000395999   ⟹   ENSP00000379321
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl472,039,178 - 72,148,061 (+)Ensembl
Ensembl Acc Id: ENST00000506359
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38.p14 Ensembl472,146,530 - 72,148,058 (+)Ensembl
RefSeq Acc Id: NM_001144756   ⟹   NP_001138228
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,039,132 - 72,148,305 (+)NCBI
GRCh37472,897,521 - 73,013,918 (+)ENTREZGENE
HuRef468,702,459 - 68,818,720 (+)ENTREZGENE
CHM1_1472,940,396 - 73,049,409 (+)NCBI
T2T-CHM13v2.0475,381,158 - 75,490,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_004885   ⟹   NP_004876
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,032,000 - 72,148,305 (+)NCBI
GRCh37472,897,521 - 73,013,918 (+)ENTREZGENE
Build 36473,116,385 - 73,232,642 (+)NCBI Archive
HuRef468,702,459 - 68,818,720 (+)ENTREZGENE
CHM1_1472,933,070 - 73,049,409 (+)NCBI
T2T-CHM13v2.0475,374,029 - 75,490,284 (+)NCBI
Sequence:
RefSeq Acc Id: NM_053036   ⟹   NP_444264
RefSeq Status: REVIEWED
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,039,132 - 72,148,305 (+)NCBI
GRCh37472,897,521 - 73,013,918 (+)ENTREZGENE
Build 36473,123,955 - 73,232,642 (+)NCBI Archive
HuRef468,702,459 - 68,818,720 (+)ENTREZGENE
CHM1_1472,940,396 - 73,049,409 (+)NCBI
T2T-CHM13v2.0475,381,158 - 75,490,284 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011531554   ⟹   XP_011529856
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,039,017 - 72,148,305 (+)NCBI
Sequence:
RefSeq Acc Id: XM_047449545   ⟹   XP_047305501
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,146,513 - 72,148,305 (+)NCBI
RefSeq Acc Id: XM_054348802   ⟹   XP_054204777
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0475,381,043 - 75,490,284 (+)NCBI
RefSeq Acc Id: XM_054348803   ⟹   XP_054204778
Type: CODING
Position:
Human AssemblyChrPosition (strand)Source
T2T-CHM13v2.0475,488,395 - 75,490,284 (+)NCBI
RefSeq Acc Id: NP_004876   ⟸   NM_004885
- Peptide Label: isoform 1
- UniProtKB: Q9Y5X5 (UniProtKB/Swiss-Prot),   Q9NR49 (UniProtKB/Swiss-Prot),   Q96RV1 (UniProtKB/Swiss-Prot),   A0PJM9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001138228   ⟸   NM_001144756
- Peptide Label: isoform 3
- UniProtKB: Q9NR49 (UniProtKB/Swiss-Prot),   Q96RV1 (UniProtKB/Swiss-Prot),   Q9Y5X5 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_444264   ⟸   NM_053036
- Peptide Label: isoform 1
- UniProtKB: Q9NR49 (UniProtKB/Swiss-Prot),   Q96RV1 (UniProtKB/Swiss-Prot),   Q9Y5X5 (UniProtKB/Swiss-Prot),   A0PJM9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_011529856   ⟸   XM_011531554
- Peptide Label: isoform X1
- Sequence:
Ensembl Acc Id: ENSP00000307822   ⟸   ENST00000308744
Ensembl Acc Id: ENSP00000379321   ⟸   ENST00000395999
Ensembl Acc Id: ENSP00000340789   ⟸   ENST00000344413
Ensembl Acc Id: ENSP00000351599   ⟸   ENST00000358749
RefSeq Acc Id: XP_047305501   ⟸   XM_047449545
- Peptide Label: isoform X2
RefSeq Acc Id: XP_054204777   ⟸   XM_054348802
- Peptide Label: isoform X1
RefSeq Acc Id: XP_054204778   ⟸   XM_054348803
- Peptide Label: isoform X2
Protein Domains
G-protein coupled receptors family 1 profile

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9Y5X5-F1-model_v2 AlphaFold Q9Y5X5 1-522 view protein structure

Promoters
RGD ID:6867678
Promoter ID:EPDNEW_H7004
Type:initiation region
Name:NPFFR2_1
Description:neuropeptide FF receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7005  EPDNEW_H7006  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,032,000 - 72,032,060EPDNEW
RGD ID:6867680
Promoter ID:EPDNEW_H7005
Type:multiple initiation site
Name:NPFFR2_3
Description:neuropeptide FF receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7004  EPDNEW_H7006  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,039,355 - 72,039,415EPDNEW
RGD ID:6867682
Promoter ID:EPDNEW_H7006
Type:single initiation site
Name:NPFFR2_2
Description:neuropeptide FF receptor 2
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_H7004  EPDNEW_H7005  
Experiment Methods:Single-end sequencing.
Position:
Human AssemblyChrPosition (strand)Source
GRCh38472,094,763 - 72,094,823EPDNEW
RGD ID:6802493
Promoter ID:HG_KWN:48446
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:K562
Transcripts:NM_001144756,   NM_053036
Position:
Human AssemblyChrPosition (strand)Source
Build 36473,123,566 - 73,124,066 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene HGNC:4525 AgrOrtholog
COSMIC NPFFR2 COSMIC
Ensembl Genes ENSG00000056291 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENST00000308744 ENTREZGENE
  ENST00000308744.12 UniProtKB/Swiss-Prot
  ENST00000344413.6 UniProtKB/TrEMBL
  ENST00000358749 ENTREZGENE
  ENST00000358749.3 UniProtKB/Swiss-Prot
  ENST00000395999 ENTREZGENE
  ENST00000395999.5 UniProtKB/Swiss-Prot
  ENST00000506359 ENTREZGENE
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
GTEx ENSG00000056291 GTEx
HGNC ID HGNC:4525 ENTREZGENE
Human Proteome Map NPFFR2 Human Proteome Map
InterPro GPCR_Rhodpsn UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NPFF_rcpt UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NPFF_rcpt_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report hsa:10886 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
NCBI Gene 10886 ENTREZGENE
OMIM 607449 OMIM
PANTHER NEUROPEPTIDE FF RECEPTOR 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PharmGKB PA28918 PharmGKB
PRINTS GPCRRHODOPSN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NPFFRECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  NPFFRECEPTR2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A0A804CC06_HUMAN UniProtKB/TrEMBL
  A0PJM9 ENTREZGENE, UniProtKB/TrEMBL
  NPFF2_HUMAN UniProtKB/Swiss-Prot
  Q96RV1 ENTREZGENE
  Q9NR49 ENTREZGENE
  Q9Y5X5 ENTREZGENE
UniProt Secondary Q96RV1 UniProtKB/Swiss-Prot
  Q9NR49 UniProtKB/Swiss-Prot