Fmo5 (flavin containing monooxygenase 5) - Rat Genome Database

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Gene: Fmo5 (flavin containing monooxygenase 5) Mus musculus
Analyze
Symbol: Fmo5
Name: flavin containing monooxygenase 5
RGD ID: 733169
MGI Page MGI
Description: Predicted to enable N,N-dimethylaniline monooxygenase activity and aldehyde oxidase activity. Involved in regulation of cholesterol metabolic process. Predicted to be located in cytosol and endoplasmic reticulum. Is expressed in bladder. Orthologous to human FMO5 (flavin containing dimethylaniline monoxygenase 5).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: 5033418D19Rik; AI195026; dimethylaniline monooxygenase [N-oxide-forming] 5; dimethylaniline oxidase 5; flavin-containing monooxygenase 5; FMO 5; hepatic flavin-containing monooxygenase 5; NADPH oxidase; NAPDH oxidase
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39397,517,248 - 97,562,603 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl397,536,120 - 97,562,598 (+)EnsemblGRCm39 Ensembl
GRCm38397,609,938 - 97,655,287 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl397,628,804 - 97,655,282 (+)EnsemblGRCm38mm10GRCm38
MGSCv37397,432,727 - 97,459,210 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36397,714,280 - 97,737,956 (+)NCBIMGSCv36mm8
Celera399,028,473 - 99,054,949 (+)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.23NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-catechin  (ISO)
(1->4)-beta-D-glucan  (EXP)
1,2-dimethylhydrazine  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (ISO)
17beta-hydroxy-5alpha-androstan-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (ISO)
3,3',4,4'-tetrachlorobiphenyl  (EXP)
3-phenylprop-2-enal  (ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
acetamide  (ISO)
aflatoxin B1  (EXP,ISO)
ammonium chloride  (ISO)
amphetamine  (ISO)
amphibole asbestos  (ISO)
antirheumatic drug  (ISO)
azathioprine  (ISO)
belinostat  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (ISO)
Benzo[ghi]perylene  (EXP)
beta-naphthoflavone  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
buspirone  (ISO)
butanal  (ISO)
cadmium dichloride  (ISO)
calcitriol  (ISO)
captan  (EXP)
carbon nanotube  (EXP)
cobalt dichloride  (ISO)
copper(II) chloride  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (EXP,ISO)
cyhalothrin  (ISO)
D-penicillamine  (ISO)
dibenz[a,h]anthracene  (ISO)
dicrotophos  (ISO)
dioxygen  (EXP)
diuron  (ISO)
doxorubicin  (EXP)
elemental selenium  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP)
fenofibrate  (ISO)
fenthion  (EXP)
fenvalerate  (ISO)
flutamide  (ISO)
folic acid  (EXP)
folpet  (EXP)
fumonisin B1  (EXP)
gold atom  (ISO)
gold(0)  (ISO)
inulin  (EXP)
irinotecan  (ISO)
L-ascorbic acid  (ISO)
lead diacetate  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
manganese(II) chloride  (ISO)
methapyrilene  (ISO)
methotrexate  (EXP)
N-nitrosodiethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nickel atom  (ISO)
nitrofen  (ISO)
O-methyleugenol  (ISO)
paracetamol  (EXP,ISO)
pentanal  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (ISO)
phenformin  (ISO)
phenobarbital  (EXP,ISO)
phorbol 13-acetate 12-myristate  (ISO)
phosgene  (EXP)
pinostrobin  (ISO)
pirinixic acid  (EXP,ISO)
potassium dichromate  (EXP)
propanal  (ISO)
propiconazole  (EXP)
quartz  (ISO)
quercetin  (ISO)
resveratrol  (ISO)
riddelliine  (ISO)
rotenone  (ISO)
selenium atom  (ISO)
senecionine  (ISO)
Senkirkine  (ISO)
silicon dioxide  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP,ISO)
sodium dichromate  (EXP)
tamoxifen  (EXP)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloroethene  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
trichloroethene  (ISO)
Triptolide  (ISO)
triptonide  (EXP)
troglitazone  (ISO)
trovafloxacin  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vitamin E  (ISO)
zinc atom  (ISO)
zinc pyrithione  (ISO)
zinc(0)  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:7473608   PMID:9580872   PMID:10349636   PMID:11042159   PMID:11076861   PMID:12477932   PMID:14681479   PMID:14691545   PMID:16141072   PMID:16141073   PMID:16602821   PMID:17721934  
PMID:19494835   PMID:21267068   PMID:21677750   PMID:21873635   PMID:22266355   PMID:26049045   PMID:27678284   PMID:28646079   PMID:29070510   PMID:29686991   PMID:31515204   PMID:32156684  
PMID:32325033   PMID:37267233  


Genomics

Comparative Map Data
Fmo5
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39397,517,248 - 97,562,603 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl397,536,120 - 97,562,598 (+)EnsemblGRCm39 Ensembl
GRCm38397,609,938 - 97,655,287 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl397,628,804 - 97,655,282 (+)EnsemblGRCm38mm10GRCm38
MGSCv37397,432,727 - 97,459,210 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36397,714,280 - 97,737,956 (+)NCBIMGSCv36mm8
Celera399,028,473 - 99,054,949 (+)NCBICelera
Cytogenetic Map3F2.2NCBI
cM Map342.23NCBI
FMO5
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381147,184,305 - 147,227,284 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1147,175,351 - 147,243,050 (-)EnsemblGRCh38hg38GRCh38
GRCh371146,655,884 - 146,696,931 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361145,124,462 - 145,163,546 (-)NCBINCBI36Build 36hg18NCBI36
Build 341143,882,653 - 143,921,738NCBI
Celera1122,287,637 - 122,328,963 (+)NCBICelera
Cytogenetic Map1q21.1NCBI
HuRef1120,068,389 - 120,109,734 (-)NCBIHuRef
CHM1_11148,552,431 - 148,593,764 (-)NCBICHM1_1
T2T-CHM13v2.01147,582,797 - 147,624,105 (+)NCBIT2T-CHM13v2.0
Fmo5
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr82187,885,741 - 187,938,468 (+)NCBIGRCr8
mRatBN7.22185,197,184 - 185,249,699 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl2185,222,204 - 185,249,693 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx2192,869,869 - 192,897,475 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.02190,677,744 - 190,705,315 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.02185,502,483 - 185,530,089 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.02199,796,870 - 199,823,927 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl2199,796,881 - 199,823,927 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.02219,274,816 - 219,301,535 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.42192,463,087 - 192,489,803 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.12192,425,840 - 192,452,786 (+)NCBI
Celera2177,714,693 - 177,742,201 (+)NCBICelera
Cytogenetic Map2q34NCBI
Fmo5
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555681,224,843 - 1,250,729 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555681,225,136 - 1,247,352 (+)NCBIChiLan1.0ChiLan1.0
FMO5
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21102,499,973 - 102,544,847 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11102,089,906 - 102,137,215 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01122,605,677 - 122,648,325 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11112,881,859 - 112,921,194 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1112,881,859 - 112,921,194 (+)Ensemblpanpan1.1panPan2
FMO5
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11757,665,879 - 57,698,540 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1757,666,762 - 57,697,982 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1757,190,322 - 57,223,052 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01758,666,500 - 58,698,201 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1758,666,576 - 58,697,816 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11757,558,263 - 57,590,623 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01757,607,021 - 57,639,664 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01758,332,782 - 58,372,446 (-)NCBIUU_Cfam_GSD_1.0
FMO5
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4100,336,980 - 100,374,367 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14100,336,769 - 100,372,744 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24110,166,395 - 110,202,322 (+)NCBISscrofa10.2Sscrofa10.2susScr3
FMO5
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Vero_WHO_p1.0NW_02366603815,012,752 - 15,056,902 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Fmo5
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462477216,131,954 - 16,155,477 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462477216,132,648 - 16,155,717 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Fmo5
1794 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1809
Count of miRNA genes:682
Interacting mature miRNAs:826
Transcripts:ENSMUST00000029729, ENSMUST00000107049, ENSMUST00000107050, ENSMUST00000133017, ENSMUST00000140283
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
26884436Zlq3_mzygomatic length QTL 3, 10 week (mouse)33265060142405761Mouse
4142399Aec1_mautoimmune exocrinopathy 1 (mouse)Not determined7586174102690034Mouse
26884427Cvht4_mcranial vault height 4, 10 week (mouse)316054164109707316Mouse
13207570Tcq12_mtotal cholesterol QTL 12 (mouse)316504164130163649Mouse
26884422Cvht7_mcranial vault height 7, 16 week (mouse)328954149118893649Mouse
1302056Orgwq4_morgan weight QTL 4 (mouse)Not determined330067588147304689Mouse
1301705Sles3_msystemic lupus erythmatosus suppressor 3 (mouse)Not determined337174862143353183Mouse
13208566Bmiq5_mbody mass index QTL 5 (mouse)340954435115793649Mouse
26884380Skwq1_mskull length QTL 1, 5 week (mouse)343954435101607316Mouse
26884378Skwq6_mskull length QTL 6, 10 week (mouse)351907421102307316Mouse
26884382Bzwq1_mbi-zygomatic width QTL 1, 5 week (mouse)352207421137205761Mouse
11039519Ltpr3_mLeishmania tropica response 3 (mouse)356704102100464137Mouse
1301971Cia5_mcollagen induced arthritis QTL 5 (mouse)Not determined366046658100046795Mouse
25314313Syncl1_msynaptonemal complex length 1 (mouse)367907333128393649Mouse
11251721Ewc3_methanol withdrawal and consumption 3 (mouse)369568554103568554Mouse
1301791Char4_mP. chabaudi malaria resistance QTL 4 (mouse)Not determined369625509100655290Mouse
1301422Sle11_msystematic lupus erythematosus susceptibility 11 (mouse)Not determined370208904104209042Mouse
11049572Lmr11c_mleishmaniasis resistance 11c (mouse)372139967106140094Mouse
1300982Lmr11_mleishmaniasis resistance 11 (mouse)Not determined372139967106140094Mouse
1300595Tmevd2_mTheiler's murine encephalomyelitis virus induced demyelinating disease susceptibility 2 (mouse)Not determined375463302109463549Mouse
1301392Eae3_msusceptibility to experimental allergic encephalomyelitis 3 (mouse)Not determined379548730113548837Mouse
1301947Pcfm3_mperiosteal circumference and femur length 3 (mouse)Not determined381084652115084797Mouse
1301904Iba2_minduction of brown adipocytes 2 (mouse)Not determined382147043116147184Mouse
11041900Lmr11a_mleishmaniasis resistance 11a (mouse)383463991117464137Mouse
11039510Ltpr3d_mLeishmania tropica response 3d (mouse)383463991117464137Mouse
11039511Ltpr3c_mLeishmania tropica response 3c (mouse)383463991117464137Mouse
11039507Ltpr3g_mLeishmania tropica response 3g (mouse)383463991117464137Mouse
11039508Ltpr3f_mLeishmania tropica response 3f (mouse)383463991117464137Mouse
11039509Ltpr3e_mLeishmania tropica response 3e (mouse)383463991117464137Mouse
11039512Ltpr3b_mLeishmania tropica response 3b (mouse)383463991117464137Mouse
1301272Cfsw1_mcystic fibrosis survival to weaning 1 (mouse)Not determined383882912117883044Mouse
4142099Cq3_mcholesterol QTL 3 (mouse)Not determined384888918118889067Mouse
14746984Manh54_mmandible shape 54 (mouse)385289152119289152Mouse
1357583Sle18_msystematic lupus erythematosus susceptibility 18 (mouse)Not determined387208904125316236Mouse
12738440Twq3_mtestis weight QTL 3 (mouse)387228015121228015Mouse
4142178Ctrq2_mC. trachomatis resistance QTL 2 (mouse)Not determined389139967137453008Mouse
10766455Sle22_msystematic lupus erythematosus susceptibility 22 (mouse)390376936124377072Mouse
14747001Mancz4_mmandible centroid size 4 (mouse)390378017124378017Mouse
1301398Rapop3_mradiation-induced apoptosis 3 (mouse)Not determined390511217100464137Mouse
1302052Etohcta4_methanol conditioned taste aversion 4 (mouse)Not determined391000105125008748Mouse
1301349Pgia26_mproteoglycan induced arthritis 26 (mouse)Not determined392251533126251650Mouse
27226732Tibmd3_mtibia midshaft diameter 3, 10 week (mouse)396607316147805636Mouse

Markers in Region
AI195026  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,652,404 - 97,652,492UniSTSGRCm38
MGSCv37397,456,327 - 97,456,415UniSTSGRCm37
Celera399,052,066 - 99,052,154UniSTS
Cytogenetic Map3F2.2UniSTS
Whitehead/MRC_RH31111.1UniSTS
AA986724  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,652,125 - 97,652,423UniSTSGRCm38
MGSCv37397,456,048 - 97,456,346UniSTSGRCm37
Celera399,051,787 - 99,052,085UniSTS
Cytogenetic Map3F2.2UniSTS
Whitehead/MRC_RH41473.36UniSTS
RH126043  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38397,634,853 - 97,635,070UniSTSGRCm38
MGSCv37397,438,776 - 97,438,993UniSTSGRCm37
Celera399,034,522 - 99,034,739UniSTS
Cytogenetic Map3F2.2UniSTS
Whitehead/MRC_RH31109.39UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001161763 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001161765 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001355119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500995 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006500996 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_011240013 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252419 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030252420 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC130541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AC140839 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK017179 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK029904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK133675 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK137645 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK147040 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK162951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC022991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CN664821 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571898 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571899 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571900 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571901 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571903 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571904 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571905 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571906 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571907 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571908 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571909 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571910 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571911 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571912 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  HM571913 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000029729   ⟹   ENSMUSP00000029729
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,536,154 - 97,559,870 (+)Ensembl
GRCm38.p6 Ensembl397,628,838 - 97,652,554 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107049   ⟹   ENSMUSP00000102664
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,536,173 - 97,559,920 (+)Ensembl
GRCm38.p6 Ensembl397,628,857 - 97,652,604 (+)Ensembl
RefSeq Acc Id: ENSMUST00000107050   ⟹   ENSMUSP00000102665
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,536,120 - 97,562,598 (+)Ensembl
GRCm38.p6 Ensembl397,628,804 - 97,655,282 (+)Ensembl
RefSeq Acc Id: ENSMUST00000133017
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,536,164 - 97,537,248 (+)Ensembl
GRCm38.p6 Ensembl397,628,848 - 97,629,932 (+)Ensembl
RefSeq Acc Id: ENSMUST00000140283
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl397,536,199 - 97,546,318 (+)Ensembl
GRCm38.p6 Ensembl397,628,883 - 97,639,002 (+)Ensembl
RefSeq Acc Id: NM_001161763   ⟹   NP_001155235
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,120 - 97,562,603 (+)NCBI
GRCm38397,628,804 - 97,655,287 (+)NCBI
MGSCv37397,432,727 - 97,459,210 (+)RGD
Celera399,028,473 - 99,054,949 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001161765   ⟹   NP_001155237
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,154 - 97,562,603 (+)NCBI
GRCm38397,628,838 - 97,655,287 (+)NCBI
MGSCv37397,432,727 - 97,459,210 (+)RGD
Celera399,028,473 - 99,054,949 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001355119   ⟹   NP_001342048
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,335 - 97,562,603 (+)NCBI
GRCm38397,629,019 - 97,655,287 (+)NCBI
Sequence:
RefSeq Acc Id: NM_010232   ⟹   NP_034362
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,120 - 97,562,603 (+)NCBI
GRCm38397,628,804 - 97,655,287 (+)NCBI
MGSCv37397,432,727 - 97,459,210 (+)RGD
Celera399,028,473 - 99,054,949 (+)RGD
cM Map3 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006500995   ⟹   XP_006501058
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,517,248 - 97,559,922 (+)NCBI
GRCm38397,609,938 - 97,652,606 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006500996   ⟹   XP_006501059
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,422 - 97,559,922 (+)NCBI
GRCm38397,629,106 - 97,652,606 (+)NCBI
Sequence:
RefSeq Acc Id: XM_011240013   ⟹   XP_011238315
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,175 - 97,557,110 (+)NCBI
GRCm38397,628,839 - 97,649,899 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252418   ⟹   XP_030108278
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,178 - 97,559,922 (+)NCBI
GRCm38397,628,862 - 97,652,606 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252419   ⟹   XP_030108279
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,092 - 97,557,215 (+)NCBI
GRCm38397,628,776 - 97,649,899 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030252420   ⟹   XP_030108280
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39397,536,108 - 97,557,215 (+)NCBI
GRCm38397,628,792 - 97,649,899 (+)NCBI
Sequence:
Reference Protein Sequences
RefSeq Acc Id: NP_034362   ⟸   NM_010232
- Peptide Label: isoform 1
- UniProtKB: Q8R1W6 (UniProtKB/Swiss-Prot),   P97872 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001155235   ⟸   NM_001161763
- Peptide Label: isoform 1
- UniProtKB: Q8R1W6 (UniProtKB/Swiss-Prot),   P97872 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001155237   ⟸   NM_001161765
- Peptide Label: isoform 1
- UniProtKB: Q8R1W6 (UniProtKB/Swiss-Prot),   P97872 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006501058   ⟸   XM_006500995
- Peptide Label: isoform X1
- UniProtKB: Q8R1W6 (UniProtKB/Swiss-Prot),   P97872 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006501059   ⟸   XM_006500996
- Peptide Label: isoform X2
- Sequence:
RefSeq Acc Id: XP_011238315   ⟸   XM_011240013
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_030108279   ⟸   XM_030252419
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030108280   ⟸   XM_030252420
- Peptide Label: isoform X3
RefSeq Acc Id: XP_030108278   ⟸   XM_030252418
- Peptide Label: isoform X2
RefSeq Acc Id: NP_001342048   ⟸   NM_001355119
- Peptide Label: isoform 2
RefSeq Acc Id: ENSMUSP00000029729   ⟸   ENSMUST00000029729
RefSeq Acc Id: ENSMUSP00000102664   ⟸   ENSMUST00000107049
RefSeq Acc Id: ENSMUSP00000102665   ⟸   ENSMUST00000107050

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P97872-F1-model_v2 AlphaFold P97872 1-533 view protein structure

Promoters
RGD ID:6833784
Promoter ID:MM_KWN:35447
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   ES_Cell,   Kidney,   Liver,   Lung,   Spleen
Transcripts:NM_001161763,   NM_001161765,   NM_010232,   OTTMUST00000058039,   OTTMUST00000058040
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,432,551 - 97,433,051 (+)MPROMDB
RGD ID:6848768
Promoter ID:MM_TRO:6347
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver,   Lung
Transcripts:MTR008055.3.1603.4
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36397,441,309 - 97,441,809 (+)MPROMDB
RGD ID:6881740
Promoter ID:EPDNEW_M4321
Type:multiple initiation site
Name:Fmo5_1
Description:Mus musculus flavin containing monooxygenase 5 , transcript variant1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38397,628,854 - 97,628,914EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1310004 AgrOrtholog
Ensembl Genes ENSMUSG00000028088 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000029729 ENTREZGENE
  ENSMUST00000029729.15 UniProtKB/Swiss-Prot
  ENSMUST00000107049 ENTREZGENE
  ENSMUST00000107049.2 UniProtKB/Swiss-Prot
  ENSMUST00000107050 ENTREZGENE
  ENSMUST00000107050.8 UniProtKB/Swiss-Prot
Gene3D-CATH 3.50.50.60 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FAD/NAD-bd_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Flavin_mOase_5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:14263 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:1310004 ENTREZGENE
NCBI Gene 14263 ENTREZGENE
PANTHER DIMETHYLANILINE MONOOXYGENASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FLAVIN-CONTAINING MONOOXYGENASE 5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam FMO-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Fmo5 PhenoGen
PIRSF FMO UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PRINTS FMOXYGENASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FMOXYGENASE5 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF51905 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt FMO5_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TRA1_MOUSE UniProtKB/TrEMBL
  Q3UV28_MOUSE UniProtKB/TrEMBL
  Q8R1W6 ENTREZGENE
UniProt Secondary Q8R1W6 UniProtKB/Swiss-Prot