NM_004817.4(TJP2):c.3104A>C (p.Tyr1035Ser) |
single nucleotide variant |
not provided [RCV000728138] |
Chr9:69251147 [GRCh38] Chr9:71866063 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2863C>A (p.Pro955Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002533113]|not provided [RCV000729802] |
Chr9:69248207 [GRCh38] Chr9:71863123 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2372T>C (p.Leu791Pro) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492157]|not provided [RCV000729812] |
Chr9:69239953 [GRCh38] Chr9:71854869 [GRCh37] Chr9:9q21.11 |
pathogenic|uncertain significance |
NM_004817.4(TJP2):c.3071G>A (p.Gly1024Asp) |
single nucleotide variant |
not provided [RCV000729088] |
Chr9:69251114 [GRCh38] Chr9:71866030 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3503A>G (p.Gln1168Arg) |
single nucleotide variant |
not provided [RCV000728574] |
Chr9:69254304 [GRCh38] Chr9:71869220 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.84dup (p.Trp29fs) |
duplication |
not provided [RCV000728651] |
Chr9:69212570..69212571 [GRCh38] Chr9:71827486..71827487 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3484G>A (p.Glu1162Lys) |
single nucleotide variant |
not provided [RCV000728669] |
Chr9:69254285 [GRCh38] Chr9:71869201 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2179G>C (p.Ala727Pro) |
single nucleotide variant |
not provided [RCV000728699] |
Chr9:69237136 [GRCh38] Chr9:71852052 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.608G>A (p.Arg203Gln) |
single nucleotide variant |
Inborn genetic diseases [RCV002535088]|not provided [RCV000728704] |
Chr9:69221152 [GRCh38] Chr9:71836068 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1885G>A (p.Glu629Lys) |
single nucleotide variant |
not provided [RCV000728707] |
Chr9:69236132 [GRCh38] Chr9:71851048 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3366C>T (p.Ile1122=) |
single nucleotide variant |
not provided [RCV000727986] |
Chr9:69252859 [GRCh38] Chr9:71867775 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3160A>G (p.Thr1054Ala) |
single nucleotide variant |
TJP2-related disorder [RCV004751682]|not provided [RCV000728757] |
Chr9:69251203 [GRCh38] Chr9:71866119 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.61-7359A>T |
single nucleotide variant |
not provided [RCV000728785] |
Chr9:69205189 [GRCh38] Chr9:71820105 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.143T>C (p.Val48Ala) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV000003041]|not provided [RCV004719614] |
Chr9:69216367 [GRCh38] Chr9:71831283 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 |
copy number gain |
See cases [RCV000050348] |
Chr9:193412..138179445 [GRCh38] Chr9:204193..141073897 [GRCh37] Chr9:194193..140193718 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.1137A>G (p.Leu379=) |
single nucleotide variant |
not provided [RCV002054635]|not specified [RCV000037066] |
Chr9:69226102 [GRCh38] Chr9:71841018 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1446C>A (p.Asp482Glu) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838538]|Hypercholanemia, familial 1 [RCV001838537]|not provided [RCV002054636]|not specified [RCV000037067] |
Chr9:69228107 [GRCh38] Chr9:71843023 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1478G>A (p.Arg493Lys) |
single nucleotide variant |
not provided [RCV000880873]|not specified [RCV000037068] |
Chr9:69229208 [GRCh38] Chr9:71844124 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1877C>G (p.Thr626Ser) |
single nucleotide variant |
TJP2-related disorder [RCV004751235]|not provided [RCV000762560]|not specified [RCV000037069] |
Chr9:69236124 [GRCh38] Chr9:71851040 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1917C>T (p.Asp639=) |
single nucleotide variant |
not provided [RCV000713853]|not specified [RCV000037070] |
Chr9:69236164 [GRCh38] Chr9:71851080 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2004G>A (p.Met668Ile) |
single nucleotide variant |
not provided [RCV000993325]|not specified [RCV000037071] |
Chr9:69236961 [GRCh38] Chr9:71851877 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2040G>A (p.Gly680=) |
single nucleotide variant |
not provided [RCV000840093]|not specified [RCV000037072] |
Chr9:69236997 [GRCh38] Chr9:71851913 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.297G>A (p.Ser99=) |
single nucleotide variant |
not provided [RCV000951099]|not specified [RCV000037073] |
Chr9:69218314 [GRCh38] Chr9:71833230 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.2646G>A (p.Ala882=) |
single nucleotide variant |
not provided [RCV000993326]|not specified [RCV000037074] |
Chr9:69246769 [GRCh38] Chr9:71861685 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.3495G>A (p.Glu1165=) |
single nucleotide variant |
not provided [RCV000885887]|not specified [RCV000037075] |
Chr9:69254296 [GRCh38] Chr9:71869212 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.382C>A (p.Gln128Lys) |
single nucleotide variant |
not provided [RCV002054637]|not specified [RCV000037076] |
Chr9:69220926 [GRCh38] Chr9:71835842 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.904C>T (p.Arg302Trp) |
single nucleotide variant |
not provided [RCV002513456]|not specified [RCV000037077] |
Chr9:69221448 [GRCh38] Chr9:71836364 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.918C>T (p.Ile306=) |
single nucleotide variant |
not provided [RCV000730537]|not specified [RCV000037078] |
Chr9:69221462 [GRCh38] Chr9:71836378 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1035C>A (p.His345Gln) |
single nucleotide variant |
Inborn genetic diseases [RCV004678598]|not specified [RCV000037079] |
Chr9:69225386 [GRCh38] Chr9:71840302 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7316G>A |
single nucleotide variant |
not provided [RCV004712007]|not specified [RCV000037080] |
Chr9:69205232 [GRCh38] Chr9:71820148 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2715C>T (p.Thr905=) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838540]|Hypercholanemia, familial 1 [RCV001838539]|not provided [RCV002054638]|not specified [RCV000037081] |
Chr9:69248059 [GRCh38] Chr9:71862975 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2727G>A (p.Ala909=) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838542]|Hypercholanemia, familial 1 [RCV001838541]|not provided [RCV002054639]|not specified [RCV000037082] |
Chr9:69248071 [GRCh38] Chr9:71862987 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2778C>T (p.Asp926=) |
single nucleotide variant |
not provided [RCV000993327]|not specified [RCV000037083] |
Chr9:69248122 [GRCh38] Chr9:71863038 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.2880+72G>A |
single nucleotide variant |
not specified [RCV000037084] |
Chr9:69248296 [GRCh38] Chr9:71863212 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2880+95A>G |
single nucleotide variant |
not provided [RCV001689589]|not specified [RCV000037085] |
Chr9:69248319 [GRCh38] Chr9:71863235 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2992-8C>T |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002490520]|not provided [RCV000909451]|not specified [RCV000038251] |
Chr9:69251027 [GRCh38] Chr9:71865943 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.3029C>T (p.Ser1010Phe) |
single nucleotide variant |
not provided [RCV002054694]|not specified [RCV000038252] |
Chr9:69251072 [GRCh38] Chr9:71865988 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
GRCh38/hg38 9q21.11-21.12(chr9:68426796-69606104)x1 |
copy number loss |
See cases [RCV000052904] |
Chr9:68426796..69606104 [GRCh38] Chr9:71130848..72221020 [GRCh37] Chr9:70231532..71410840 [NCBI36] Chr9:9q21.11-21.12 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124532)x3 |
copy number gain |
See cases [RCV000053745] |
Chr9:193412..138124532 [GRCh38] Chr9:204193..141018984 [GRCh37] Chr9:194193..140138805 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 |
copy number gain |
Developmental Delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|Developmental delay and additional significant developmental and morphological phenotypes referred for genetic testing [RCV000053748]|See cases [RCV000053748] |
Chr9:193412..138179445 [GRCh38] Chr9:266045..141073897 [GRCh37] Chr9:256045..140193718 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138114463)x3 |
copy number gain |
See cases [RCV000053746] |
Chr9:193412..138114463 [GRCh38] Chr9:214367..141008915 [GRCh37] Chr9:204367..140128736 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.3(TJP2):c.1474C>T (p.Pro492Ser) |
single nucleotide variant |
Malignant melanoma [RCV000068690] |
Chr9:69229204 [GRCh38] Chr9:71844120 [GRCh37] Chr9:71033940 [NCBI36] Chr9:9q21.11 |
not provided |
NM_001170414.2(TJP2):c.-130-10224C>T |
single nucleotide variant |
Lung cancer [RCV000108345] |
Chr9:69141427 [GRCh38] Chr9:71756343 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1001del (p.Arg334fs) |
deletion |
not provided [RCV000171538] |
Chr9:69225352 [GRCh38] Chr9:71840268 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.239+19T>C |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838556]|Hypercholanemia, familial 1 [RCV001838555]|not provided [RCV001610491]|not specified [RCV000177217] |
Chr9:69216482 [GRCh38] Chr9:71831398 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.3(TJP2):c.3408_3573del166 (p.Ser1136Argfs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000201465] |
Chr9:69254206..69254371 [GRCh38] Chr9:71869122..71869287 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2524C>T (p.Gln842Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001332517]|not provided [RCV001780252] |
Chr9:69240105 [GRCh38] Chr9:71855021 [GRCh37] Chr9:9q21.11 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:204193-138179445) |
copy number gain |
See cases [RCV000133791] |
Chr9:204193..138179445 [GRCh38] Chr9:204193..141073897 [GRCh37] Chr9:194193..140193718 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.766_769del (p.Ala256fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000128570]|Hypercholanemia, familial 1 [RCV003992192]|not provided [RCV000724354] |
Chr9:69221310..69221313 [GRCh38] Chr9:71836226..71836229 [GRCh37] Chr9:9q21.11 |
pathogenic|uncertain significance |
NM_004817.4(TJP2):c.885del (p.Ser296fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000128571] |
Chr9:69221426 [GRCh38] Chr9:71836342 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1361del (p.Ala454fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000128572]|Hypercholanemia, familial 1 [RCV003992193] |
Chr9:69228022 [GRCh38] Chr9:71842938 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1992-2A>G |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000128573]|not provided [RCV000724364] |
Chr9:69236947 [GRCh38] Chr9:71851863 [GRCh37] Chr9:9q21.11 |
pathogenic |
GRCh38/hg38 9q21.11-21.13(chr9:68454847-76252863)x1 |
copy number loss |
See cases [RCV000133632] |
Chr9:68454847..76252863 [GRCh38] Chr9:71130848..78867779 [GRCh37] Chr9:70259583..78057599 [NCBI36] Chr9:9q21.11-21.13 |
pathogenic |
GRCh38/hg38 9p24.3-q21.12(chr9:193412-70630731)x3 |
copy number gain |
See cases [RCV000136152] |
Chr9:193412..70630731 [GRCh38] Chr9:220253..73245647 [GRCh37] Chr9:210253..72435467 [NCBI36] Chr9:9p24.3-q21.12 |
pathogenic |
GRCh38/hg38 9p24.3-q21.13(chr9:193412-74615913)x3 |
copy number gain |
See cases [RCV000135954] |
Chr9:193412..74615913 [GRCh38] Chr9:204193..77230829 [GRCh37] Chr9:194193..76420649 [NCBI36] Chr9:9p24.3-q21.13 |
pathogenic |
GRCh38/hg38 9q21.11-31.2(chr9:68420430-106579493)x3 |
copy number gain |
See cases [RCV000136788] |
Chr9:68420430..106579493 [GRCh38] Chr9:71130848..109341774 [GRCh37] Chr9:70225166..108381595 [NCBI36] Chr9:9q21.11-31.2 |
pathogenic |
GRCh38/hg38 9q21.11-21.12(chr9:68420349-70939579)x1 |
copy number loss |
See cases [RCV000137529] |
Chr9:68420349..70939579 [GRCh38] Chr9:71130848..73554495 [GRCh37] Chr9:70225085..72744315 [NCBI36] Chr9:9q21.11-21.12 |
likely pathogenic |
GRCh38/hg38 9q21.11-21.12(chr9:69060538-69564402)x3 |
copy number gain |
See cases [RCV000137473] |
Chr9:69060538..69564402 [GRCh38] Chr9:71675454..72179318 [GRCh37] Chr9:70865274..71369138 [NCBI36] Chr9:9q21.11-21.12 |
likely benign |
GRCh38/hg38 9q21.11(chr9:69060538-69214496)x1 |
copy number loss |
See cases [RCV000137286] |
Chr9:69060538..69214496 [GRCh38] Chr9:71675454..71829412 [GRCh37] Chr9:70865274..71019232 [NCBI36] Chr9:9q21.11 |
uncertain significance |
GRCh38/hg38 9q21.11-21.32(chr9:68499530-83670227)x1 |
copy number loss |
See cases [RCV000137963] |
Chr9:68499530..83670227 [GRCh38] Chr9:71130848..86285142 [GRCh37] Chr9:70304266..85474962 [NCBI36] Chr9:9q21.11-21.32 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138124524)x3 |
copy number gain |
See cases [RCV000138783] |
Chr9:193412..138124524 [GRCh38] Chr9:204090..141018976 [GRCh37] Chr9:194090..140138797 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh38/hg38 9p11.2-q34.3(chr9:193412-138159073)x3 |
copy number gain |
See cases [RCV000139207] |
Chr9:193412..138159073 [GRCh38] Chr9:68420641..141053525 [GRCh37] Chr9:67910461..140173346 [NCBI36] Chr9:9p11.2-q34.3 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138159073)x3 |
copy number gain |
See cases [RCV000138962] |
Chr9:193412..138159073 [GRCh38] Chr9:204104..141053525 [GRCh37] Chr9:194104..140173346 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic|conflicting data from submitters |
GRCh38/hg38 9q21.11(chr9:68991449-69164502)x3 |
copy number gain |
See cases [RCV000140627] |
Chr9:68991449..69164502 [GRCh38] Chr9:71606365..71779418 [GRCh37] Chr9:70796185..70969238 [NCBI36] Chr9:9q21.11 |
uncertain significance |
GRCh38/hg38 9p24.3-q22.1(chr9:203861-88130444)x4 |
copy number gain |
See cases [RCV000141904] |
Chr9:203861..88130444 [GRCh38] Chr9:203861..90745359 [GRCh37] Chr9:193861..89935179 [NCBI36] Chr9:9p24.3-q22.1 |
pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:203861-138125937)x3 |
copy number gain |
See cases [RCV000141876] |
Chr9:203861..138125937 [GRCh38] Chr9:203861..141020389 [GRCh37] Chr9:193861..140140210 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh38/hg38 9p24.3-q21.31(chr9:193412-79877816)x3 |
copy number gain |
See cases [RCV000143012] |
Chr9:193412..79877816 [GRCh38] Chr9:204104..82492731 [GRCh37] Chr9:194104..81682551 [NCBI36] Chr9:9p24.3-q21.31 |
pathogenic |
GRCh38/hg38 9q21.11-21.12(chr9:68802194-69342807)x3 |
copy number gain |
See cases [RCV000143167] |
Chr9:68802194..69342807 [GRCh38] Chr9:71417110..71957723 [GRCh37] Chr9:70606930..71147543 [NCBI36] Chr9:9q21.11-21.12 |
uncertain significance |
GRCh38/hg38 9q21.11-21.13(chr9:68624483-72028837)x3 |
copy number gain |
See cases [RCV000143753] |
Chr9:68624483..72028837 [GRCh38] Chr9:71239399..74643753 [GRCh37] Chr9:70429219..73833573 [NCBI36] Chr9:9q21.11-21.13 |
likely pathogenic |
GRCh38/hg38 9p24.3-q34.3(chr9:203862-138125937)x3 |
copy number gain |
See cases [RCV000143476] |
Chr9:203862..138125937 [GRCh38] Chr9:203862..141020389 [GRCh37] Chr9:193862..140140210 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.2987C>T (p.Pro996Leu) |
single nucleotide variant |
not provided [RCV001770117]|not specified [RCV000155895] |
Chr9:69249481 [GRCh38] Chr9:71864397 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.322A>T (p.Ser108Cys) |
single nucleotide variant |
not provided [RCV003328560]|not specified [RCV000155934] |
Chr9:69218339 [GRCh38] Chr9:71833255 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3407+3A>G |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002498771]|not specified [RCV000156821] |
Chr9:69252903 [GRCh38] Chr9:71867819 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2880+4A>G |
single nucleotide variant |
not provided [RCV003574716]|not specified [RCV000156872] |
Chr9:69248228 [GRCh38] Chr9:71863144 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1444del (p.Asp482fs) |
deletion |
not provided [RCV003133151]|not specified [RCV000152021] |
Chr9:69228104 [GRCh38] Chr9:71843020 [GRCh37] Chr9:9q21.11 |
likely pathogenic|uncertain significance |
NM_004817.4(TJP2):c.2859G>T (p.Ser953=) |
single nucleotide variant |
not provided [RCV000926391]|not specified [RCV000152027] |
Chr9:69248203 [GRCh38] Chr9:71863119 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2865G>A (p.Pro955=) |
single nucleotide variant |
not specified [RCV000152028] |
Chr9:69248209 [GRCh38] Chr9:71863125 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2970A>G (p.Ala990=) |
single nucleotide variant |
not provided [RCV002516059]|not specified [RCV000152030] |
Chr9:69249464 [GRCh38] Chr9:71864380 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3500G>A (p.Arg1167His) |
single nucleotide variant |
Inborn genetic diseases [RCV004019827]|not specified [RCV000152032] |
Chr9:69254301 [GRCh38] Chr9:71869217 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3557G>A (p.Arg1186Gln) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002505155]|TJP2-related disorder [RCV004751296]|not specified [RCV000152033] |
Chr9:69254358 [GRCh38] Chr9:71869274 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.644G>A (p.Arg215His) |
single nucleotide variant |
not provided [RCV000972798]|not specified [RCV000155290] |
Chr9:69221188 [GRCh38] Chr9:71836104 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1258C>T (p.Arg420Cys) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV000766064]|TJP2-related disorder [RCV003927508]|not provided [RCV001731401]|not specified [RCV000155291] |
Chr9:69227812 [GRCh38] Chr9:71842728 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.1521-7A>C |
single nucleotide variant |
TJP2-related disorder [RCV003945235]|not provided [RCV002514992]|not specified [RCV000155292] |
Chr9:69230075 [GRCh38] Chr9:71844991 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1091C>T (p.Thr364Met) |
single nucleotide variant |
TJP2-related disorder [RCV003937462]|not provided [RCV000891538]|not specified [RCV000155394] |
Chr9:69226056 [GRCh38] Chr9:71840972 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.342+12G>T |
single nucleotide variant |
not provided [RCV000834388]|not specified [RCV000155395] |
Chr9:69218371 [GRCh38] Chr9:71833287 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2131T>C (p.Ser711Pro) |
single nucleotide variant |
not provided [RCV000961932]|not specified [RCV000155396] |
Chr9:69237088 [GRCh38] Chr9:71852004 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.61-7344G>C |
single nucleotide variant |
TJP2-related disorder [RCV003917527]|not provided [RCV000993329]|not specified [RCV000155434] |
Chr9:69205204 [GRCh38] Chr9:71820120 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2691C>T (p.Pro897=) |
single nucleotide variant |
TJP2-related disorder [RCV003907477]|not provided [RCV000884250]|not specified [RCV000155436] |
Chr9:69248035 [GRCh38] Chr9:71862951 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.2810T>C (p.Leu937Pro) |
single nucleotide variant |
not provided [RCV000886729]|not specified [RCV000155437] |
Chr9:69248154 [GRCh38] Chr9:71863070 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.3063C>T (p.Ala1021=) |
single nucleotide variant |
TJP2-related disorder [RCV004751302]|not provided [RCV000727384]|not specified [RCV000155439] |
Chr9:69251106 [GRCh38] Chr9:71866022 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2858C>T (p.Ser953Leu) |
single nucleotide variant |
not provided [RCV000728975]|not specified [RCV000155441] |
Chr9:69248202 [GRCh38] Chr9:71863118 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-6A>T |
single nucleotide variant |
TJP2-related disorder [RCV003917482]|not provided [RCV000907762]|not specified [RCV000152017] |
Chr9:69212542 [GRCh38] Chr9:71827458 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.185C>T (p.Thr62Met) |
single nucleotide variant |
Autosomal dominant nonsyndromic hearing loss 51 [RCV004584614]|Hypercholanemia, familial 1 [RCV001250045]|TJP2-related disorder [RCV003935276]|not provided [RCV000662345]|not specified [RCV000152018] |
Chr9:69216409 [GRCh38] Chr9:71831325 [GRCh37] Chr9:9q21.11 |
likely pathogenic|likely benign|conflicting interpretations of pathogenicity|uncertain significance|not provided |
NM_004817.4(TJP2):c.698G>A (p.Arg233Gln) |
single nucleotide variant |
not provided [RCV000889706]|not specified [RCV000152019] |
Chr9:69221242 [GRCh38] Chr9:71836158 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.1350C>T (p.Ser450=) |
single nucleotide variant |
not provided [RCV000961931]|not specified [RCV000152020] |
Chr9:69228011 [GRCh38] Chr9:71842927 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2129T>C (p.Val710Ala) |
single nucleotide variant |
not provided [RCV001753539]|not specified [RCV000152022] |
Chr9:69237086 [GRCh38] Chr9:71852002 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2137A>G (p.Ser713Gly) |
single nucleotide variant |
not provided [RCV000907834]|not specified [RCV000152023] |
Chr9:69237094 [GRCh38] Chr9:71852010 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2367A>G (p.Ala789=) |
single nucleotide variant |
not provided [RCV000907835]|not specified [RCV000152024] |
Chr9:69239948 [GRCh38] Chr9:71854864 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2636A>G (p.Gln879Arg) |
single nucleotide variant |
TJP2-related disorder [RCV003927468]|not provided [RCV000900846]|not specified [RCV000152025] |
Chr9:69246759 [GRCh38] Chr9:71861675 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.2720T>C (p.Met907Thr) |
single nucleotide variant |
TJP2-related disorder [RCV003917483]|not provided [RCV001753540]|not specified [RCV000152026] |
Chr9:69248064 [GRCh38] Chr9:71862980 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2880+19C>T |
single nucleotide variant |
not provided [RCV000726576]|not specified [RCV000152029] |
Chr9:69248243 [GRCh38] Chr9:71863159 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.3342T>C (p.His1114=) |
single nucleotide variant |
TJP2-related disorder [RCV003975185]|not provided [RCV000840155]|not specified [RCV000152031] |
Chr9:69252835 [GRCh38] Chr9:71867751 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1213_1215del (p.Ile405del) |
deletion |
Hypercholanemia, familial 1 [RCV002484939]|Nonsyndromic Hearing Loss, Dominant [RCV000391968]|not provided [RCV000724040]|not specified [RCV000155585] |
Chr9:69227766..69227768 [GRCh38] Chr9:71842682..71842684 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh38/hg38 9p24.3-q34.3(chr9:193412-138179445)x3 |
copy number gain |
See cases [RCV000148113] |
Chr9:193412..138179445 [GRCh38] Chr9:204193..141073897 [GRCh37] Chr9:194193..140193718 [NCBI36] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.745_746delinsAT (p.Tyr249Ile) |
indel |
not provided [RCV000178896] |
Chr9:69221289..69221290 [GRCh38] Chr9:71836205..71836206 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.577C>T (p.Arg193Trp) |
single nucleotide variant |
TJP2-related disorder [RCV004751340]|not provided [RCV000178897] |
Chr9:69221121 [GRCh38] Chr9:71836037 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1027A>G (p.Asn343Asp) |
single nucleotide variant |
not provided [RCV000179447] |
Chr9:69225378 [GRCh38] Chr9:71840294 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3408-6del |
deletion |
not provided [RCV000176403] |
Chr9:69254197 [GRCh38] Chr9:71869113 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 9q21.11(chr9:71395668-71944494)x3 |
copy number gain |
See cases [RCV000240188] |
Chr9:71395668..71944494 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2438dup (p.Asn814fs) |
duplication |
Cholestasis, progressive familial intrahepatic, 4 [RCV000203571] |
Chr9:69240012..69240013 [GRCh38] Chr9:71854928..71854929 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.817del (p.Ala273fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000203574]|not provided [RCV000728650] |
Chr9:69221358 [GRCh38] Chr9:71836274 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2668-1G>T |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000203578] |
Chr9:69248011 [GRCh38] Chr9:71862927 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3407+7G>A |
single nucleotide variant |
TJP2-related disorder [RCV003955263]|not provided [RCV002057150]|not specified [RCV000223651] |
Chr9:69252907 [GRCh38] Chr9:71867823 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.3190G>T (p.Val1064Leu) |
single nucleotide variant |
not provided [RCV000842339]|not specified [RCV000220318] |
Chr9:69251233 [GRCh38] Chr9:71866149 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity |
NM_004817.4(TJP2):c.61-7319G>C |
single nucleotide variant |
not provided [RCV000727141]|not specified [RCV000214742] |
Chr9:69205229 [GRCh38] Chr9:71820145 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2819C>T (p.Pro940Leu) |
single nucleotide variant |
TJP2-related disorder [RCV003977617]|not provided [RCV003718143]|not specified [RCV000216644] |
Chr9:69248163 [GRCh38] Chr9:71863079 [GRCh37] Chr9:9q21.11 |
benign|likely benign|uncertain significance |
NM_004817.4(TJP2):c.2864C>T (p.Pro955Leu) |
single nucleotide variant |
TJP2-related disorder [RCV003919884]|not provided [RCV000734093]|not specified [RCV000219208] |
Chr9:69248208 [GRCh38] Chr9:71863124 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NC_000009.11:g.71705804_71974823invdup |
duplication |
Autosomal dominant nonsyndromic hearing loss 51 [RCV000225069] |
Chr9:9q21.11 |
pathogenic |
NC_000009.12:g.69090066_69225446dup |
duplication |
Autosomal dominant nonsyndromic hearing loss 51 [RCV000225083] |
Chr9:69090066..69225446 [GRCh38] Chr9:71704982..71840362 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3068C>T (p.Ala1023Val) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001335194]|TJP2-related disorder [RCV003939944]|not provided [RCV000270991] |
Chr9:69251111 [GRCh38] Chr9:71866027 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 9q21.11(chr9:71661284-71821182)x3 |
copy number gain |
See cases [RCV000239862] |
Chr9:71661284..71821182 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p24.3-q34.3(chr9:163131-141122114)x3 |
copy number gain |
See cases [RCV000240081] |
Chr9:163131..141122114 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.1462C>A (p.Pro488Thr) |
single nucleotide variant |
not provided [RCV000595670] |
Chr9:69229192 [GRCh38] Chr9:71844108 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1063G>C (p.Gly355Arg) |
single nucleotide variant |
not provided [RCV000968148]|not specified [RCV000248649] |
Chr9:69226028 [GRCh38] Chr9:71840944 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1057-17A>G |
single nucleotide variant |
not provided [RCV002058175]|not specified [RCV000244290] |
Chr9:69226005 [GRCh38] Chr9:71840921 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3372G>A (p.Thr1124=) |
single nucleotide variant |
not provided [RCV000727015]|not specified [RCV000249306] |
Chr9:69252865 [GRCh38] Chr9:71867781 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.-16G>T |
single nucleotide variant |
not provided [RCV001582864]|not specified [RCV000252498] |
Chr9:69174357 [GRCh38] Chr9:71789273 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2275+16T>G |
single nucleotide variant |
not provided [RCV001683048]|not specified [RCV000242979] |
Chr9:69237989 [GRCh38] Chr9:71852905 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.239+14del |
deletion |
not provided [RCV002058176]|not specified [RCV000250508] |
Chr9:69216475 [GRCh38] Chr9:71831391 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.1672-20C>G |
single nucleotide variant |
not provided [RCV001707590]|not specified [RCV000253104] |
Chr9:69234419 [GRCh38] Chr9:71849335 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2992-19G>A |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838581]|Hypercholanemia, familial 1 [RCV001838580]|not provided [RCV001610652]|not specified [RCV000253272] |
Chr9:69251016 [GRCh38] Chr9:69251016..69251017 [GRCh38] Chr9:71865932 [GRCh37] Chr9:71865932..71865933 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2937C>T (p.Ser979=) |
single nucleotide variant |
TJP2-related disorder [RCV003902442]|not provided [RCV000931461] |
Chr9:69249431 [GRCh38] Chr9:71864347 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2991+8G>A |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000320431] |
Chr9:69249493 [GRCh38] Chr9:71864409 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1593C>T (p.Val531=) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000369128] |
Chr9:69230154 [GRCh38] Chr9:71845070 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2275+24del |
deletion |
Nonsyndromic Hearing Loss, Dominant [RCV000285063] |
Chr9:69237989 [GRCh38] Chr9:71852905 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2028A>G (p.Arg676=) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000373513] |
Chr9:69236985 [GRCh38] Chr9:71851901 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.*370G>C |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000399700] |
Chr9:69254744 [GRCh38] Chr9:71869660 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.*729G>A |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000305470] |
Chr9:69255103 [GRCh38] Chr9:71870019 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2775G>A (p.Thr925=) |
single nucleotide variant |
TJP2-related disorder [RCV003950305]|not provided [RCV000730220] |
Chr9:69248119 [GRCh38] Chr9:71863035 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.*187G>C |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000349962] |
Chr9:69254561 [GRCh38] Chr9:71869477 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.887G>A (p.Ser296Asn) |
single nucleotide variant |
TJP2-related disorder [RCV003902441]|not provided [RCV001591040]|not specified [RCV000729192] |
Chr9:69221431 [GRCh38] Chr9:71836347 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.1520+13G>A |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000307418] |
Chr9:69229263 [GRCh38] Chr9:71844179 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.582C>T (p.Asp194=) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000273928] |
Chr9:69221126 [GRCh38] Chr9:71836042 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.296C>T (p.Ser99Leu) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000307760] |
Chr9:69218313 [GRCh38] Chr9:71833229 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1099C>T (p.Arg367Ter) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000378726] |
Chr9:69226064 [GRCh38] Chr9:71840980 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.*183G>A |
single nucleotide variant |
not provided [RCV001673608] |
Chr9:69254557 [GRCh38] Chr9:71869473 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.3408-6dup |
duplication |
Nonsyndromic Hearing Loss, Dominant [RCV000332418]|TJP2-related disorder [RCV003897820] |
Chr9:69254196..69254197 [GRCh38] Chr9:71869112..71869113 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.3371C>T (p.Thr1124Met) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV001250044]|Hypercholanemia, familial 1 [RCV002248632]|Primary biliary cholangitis [RCV003447525]|TJP2-related disorder [RCV003897819]|not provided [RCV001850941] |
Chr9:69252864 [GRCh38] Chr9:71867780 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic|uncertain significance |
NM_004817.4(TJP2):c.1671+18_1671+19del |
microsatellite |
Nonsyndromic Hearing Loss, Dominant [RCV000277050] |
Chr9:69230248..69230249 [GRCh38] Chr9:71845164..71845165 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+11G>T |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000406016] |
Chr9:69248235 [GRCh38] Chr9:71863151 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1093G>A (p.Asp365Asn) |
single nucleotide variant |
not provided [RCV002575329] |
Chr9:69226058 [GRCh38] Chr9:71840974 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.*633A>G |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000335909] |
Chr9:69255007 [GRCh38] Chr9:71869923 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2992-11G>T |
single nucleotide variant |
not provided [RCV002589401] |
Chr9:69251024 [GRCh38] Chr9:71865940 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2384C>T (p.Pro795Leu) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000384766]|TJP2-related disorder [RCV003957873]|not provided [RCV000922135] |
Chr9:69239965 [GRCh38] Chr9:71854881 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.*695G>C |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000406844] |
Chr9:69255069 [GRCh38] Chr9:71869985 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.*620A>T |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000278549] |
Chr9:69254994 [GRCh38] Chr9:71869910 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2909G>A (p.Arg970Gln) |
single nucleotide variant |
Hearing impairment [RCV001375402]|Nonsyndromic Hearing Loss, Dominant [RCV000359813]|TJP2-related disorder [RCV003430975]|not provided [RCV001764339] |
Chr9:69249403 [GRCh38] Chr9:71864319 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1960T>C (p.Leu654=) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV004725195]|not provided [RCV000729969] |
Chr9:69236207 [GRCh38] Chr9:71851123 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.508A>G (p.Ser170Gly) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000386975] |
Chr9:69221052 [GRCh38] Chr9:71835968 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1202A>G (p.Glu401Gly) |
single nucleotide variant |
TJP2-related disorder [RCV003416555]|not provided [RCV001891345] |
Chr9:69226167 [GRCh38] Chr9:71841083 [GRCh37] Chr9:9q21.11 |
likely pathogenic|uncertain significance |
NM_004817.4(TJP2):c.2897G>A (p.Ser966Asn) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000298263] |
Chr9:69249391 [GRCh38] Chr9:71864307 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.773A>T (p.Asp258Val) |
single nucleotide variant |
Nonsyndromic Hearing Loss, Dominant [RCV000319723] |
Chr9:69221317 [GRCh38] Chr9:71836233 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1561G>A (p.Val521Met) |
single nucleotide variant |
Inborn genetic diseases [RCV004021250]|not provided [RCV000270854] |
Chr9:69230122 [GRCh38] Chr9:71845038 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.568G>A (p.Asp190Asn) |
single nucleotide variant |
not provided [RCV000338553] |
Chr9:69221112 [GRCh38] Chr9:71836028 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1818G>A (p.Ser606=) |
single nucleotide variant |
not provided [RCV000372974] |
Chr9:69236065 [GRCh38] Chr9:71850981 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2963C>T (p.Pro988Leu) |
single nucleotide variant |
not provided [RCV000375836] |
Chr9:69249457 [GRCh38] Chr9:71864373 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.19C>T (p.Arg7Cys) |
single nucleotide variant |
not provided [RCV000377916] |
Chr9:69174391 [GRCh38] Chr9:71789307 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2851C>T (p.Arg951Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV002521983]|not provided [RCV000309453] |
Chr9:69248195 [GRCh38] Chr9:71863111 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.395C>G (p.Pro132Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV003165722]|TJP2-related disorder [RCV003977732]|not provided [RCV000342641] |
Chr9:69220939 [GRCh38] Chr9:71835855 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.655C>T (p.Arg219Trp) |
single nucleotide variant |
not provided [RCV000279815] |
Chr9:69221199 [GRCh38] Chr9:71836115 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.375C>T (p.Ala125=) |
single nucleotide variant |
not provided [RCV001564225]|not specified [RCV000281151] |
Chr9:69220919 [GRCh38] Chr9:71835835 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.911G>A (p.Gly304Glu) |
single nucleotide variant |
TJP2-related disorder [RCV003930139]|not provided [RCV000281503] |
Chr9:69221455 [GRCh38] Chr9:71836371 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.570_574dup (p.Ser192fs) |
duplication |
Cholestasis, progressive familial intrahepatic, 4 [RCV000984952]|not provided [RCV000339498] |
Chr9:69221112..69221113 [GRCh38] Chr9:71836028..71836029 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.258C>T (p.Val86=) |
single nucleotide variant |
not provided [RCV000317750] |
Chr9:69218275 [GRCh38] Chr9:71833191 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1520+6T>C |
single nucleotide variant |
TJP2-related disorder [RCV004751445]|not provided [RCV000318654] |
Chr9:69229256 [GRCh38] Chr9:71844172 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.1697T>A (p.Leu566Ter) |
single nucleotide variant |
not provided [RCV000347898] |
Chr9:69234464 [GRCh38] Chr9:71849380 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.812G>A (p.Arg271His) |
single nucleotide variant |
not provided [RCV000287567] |
Chr9:69221356 [GRCh38] Chr9:71836272 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2239T>C (p.Leu747=) |
single nucleotide variant |
not provided [RCV000321640] |
Chr9:69237937 [GRCh38] Chr9:71852853 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1953G>T (p.Gly651=) |
single nucleotide variant |
TJP2-related disorder [RCV004751440]|not provided [RCV000323325] |
Chr9:69236200 [GRCh38] Chr9:71851116 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2791G>A (p.Ala931Thr) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002494889]|Inborn genetic diseases [RCV002519330]|not provided [RCV000358685] |
Chr9:69248135 [GRCh38] Chr9:71863051 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.577C>A (p.Arg193=) |
single nucleotide variant |
not provided [RCV000395622] |
Chr9:69221121 [GRCh38] Chr9:71836037 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.705G>T (p.Arg235=) |
single nucleotide variant |
not provided [RCV000359543] |
Chr9:69221249 [GRCh38] Chr9:71836165 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.498dup (p.Arg167fs) |
duplication |
not provided [RCV000398816] |
Chr9:69221036..69221037 [GRCh38] Chr9:71835952..71835953 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2880+17C>T |
single nucleotide variant |
TJP2-related disorder [RCV003967803]|not provided [RCV000328218] |
Chr9:69248241 [GRCh38] Chr9:71863157 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.410A>T (p.Asp137Val) |
single nucleotide variant |
not provided [RCV000363029] |
Chr9:69220954 [GRCh38] Chr9:71835870 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3432A>G (p.Lys1144=) |
single nucleotide variant |
not provided [RCV000401633] |
Chr9:69254233 [GRCh38] Chr9:71869149 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.850AGCCGC[3] (p.284SR[3]) |
microsatellite |
TJP2-related disorder [RCV003920160]|not provided [RCV000267156] |
Chr9:69221393..69221394 [GRCh38] Chr9:71836309..71836310 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.908C>T (p.Pro303Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV004678664]|TJP2-related disorder [RCV003957494]|not provided [RCV000333360] |
Chr9:69221452 [GRCh38] Chr9:71836368 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1473C>A (p.Ala491=) |
single nucleotide variant |
not provided [RCV000367000] |
Chr9:69229203 [GRCh38] Chr9:71844119 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.919G>A (p.Gly307Arg) |
single nucleotide variant |
not provided [RCV000301077] |
Chr9:69221463 [GRCh38] Chr9:71836379 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.215G>C (p.Gly72Ala) |
single nucleotide variant |
not provided [RCV000597068] |
Chr9:69216439 [GRCh38] Chr9:71831355 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2546C>G (p.Thr849Arg) |
single nucleotide variant |
not provided [RCV000597809] |
Chr9:69240127 [GRCh38] Chr9:71855043 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.782del (p.Tyr261fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492118]|not provided [RCV000598162] |
Chr9:69221326 [GRCh38] Chr9:71836242 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1100G>A (p.Arg367Gln) |
single nucleotide variant |
not provided [RCV000594626] |
Chr9:69226065 [GRCh38] Chr9:71840981 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1780+1G>T |
single nucleotide variant |
not provided [RCV000595149] |
Chr9:69234548 [GRCh38] Chr9:71849464 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2334C>T (p.Thr778=) |
single nucleotide variant |
not provided [RCV000595529] |
Chr9:69238768 [GRCh38] Chr9:71853684 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2457A>G (p.Gln819=) |
single nucleotide variant |
not provided [RCV000596378] |
Chr9:69240038 [GRCh38] Chr9:71854954 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1057-9T>A |
single nucleotide variant |
not provided [RCV000596698] |
Chr9:69226013 [GRCh38] Chr9:71840929 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1235G>A (p.Arg412Gln) |
single nucleotide variant |
not provided [RCV000596767] |
Chr9:69227789 [GRCh38] Chr9:71842705 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.-5C>T |
single nucleotide variant |
not provided [RCV000596977] |
Chr9:69174368 [GRCh38] Chr9:71789284 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1056+2T>C |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV000763622]|TJP2-related disorder [RCV003900292]|not provided [RCV000579219] |
Chr9:69225409 [GRCh38] Chr9:71840325 [GRCh37] Chr9:9q21.11 |
likely pathogenic|uncertain significance |
NM_004817.4(TJP2):c.2954A>G (p.Asn985Ser) |
single nucleotide variant |
not provided [RCV001760687] |
Chr9:69249448 [GRCh38] Chr9:71864364 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2832G>A (p.Pro944=) |
single nucleotide variant |
TJP2-related disorder [RCV004751608]|not provided [RCV000591708] |
Chr9:69248176 [GRCh38] Chr9:71863092 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1571G>A (p.Arg524Gln) |
single nucleotide variant |
not provided [RCV000730104] |
Chr9:69230132 [GRCh38] Chr9:71845048 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1671+8C>T |
single nucleotide variant |
not provided [RCV000730121] |
Chr9:69230240 [GRCh38] Chr9:71845156 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7279del |
deletion |
not provided [RCV000592303] |
Chr9:69205266 [GRCh38] Chr9:71820182 [GRCh37] Chr9:9q21.11 |
pathogenic|uncertain significance |
NM_004817.4(TJP2):c.1035C>T (p.His345=) |
single nucleotide variant |
not provided [RCV000592349] |
Chr9:69225386 [GRCh38] Chr9:71840302 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1142T>A (p.Val381Glu) |
single nucleotide variant |
Inborn genetic diseases [RCV001267100]|not provided [RCV000730454] |
Chr9:69226107 [GRCh38] Chr9:71841023 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1771C>T (p.Arg591Ter) |
single nucleotide variant |
Inborn genetic diseases [RCV001267101]|not provided [RCV000730455] |
Chr9:69234538 [GRCh38] Chr9:71849454 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1923G>C (p.Lys641Asn) |
single nucleotide variant |
Inborn genetic diseases [RCV002536447]|not provided [RCV000730505] |
Chr9:69236170 [GRCh38] Chr9:71851086 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1665T>C (p.Ile555=) |
single nucleotide variant |
not provided [RCV000592548] |
Chr9:69230226 [GRCh38] Chr9:71845142 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1886_1900del (p.Glu629_Val633del) |
deletion |
not provided [RCV000592620] |
Chr9:69236131..69236145 [GRCh38] Chr9:71851047..71851061 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7341A>G |
single nucleotide variant |
not provided [RCV000592754] |
Chr9:69205207 [GRCh38] Chr9:71820123 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2948G>A (p.Arg983Lys) |
single nucleotide variant |
not provided [RCV000592900] |
Chr9:69249442 [GRCh38] Chr9:71864358 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2335G>A (p.Val779Met) |
single nucleotide variant |
Inborn genetic diseases [RCV004024865]|TJP2-related disorder [RCV003915739]|not provided [RCV000592944] |
Chr9:69238769 [GRCh38] Chr9:71853685 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1918G>A (p.Gly640Ser) |
single nucleotide variant |
not provided [RCV000597390] |
Chr9:69236165 [GRCh38] Chr9:71851081 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2751C>T (p.Arg917=) |
single nucleotide variant |
TJP2-related disorder [RCV003905528]|not provided [RCV000597867] |
Chr9:69248095 [GRCh38] Chr9:71863011 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1629G>A (p.Ser543=) |
single nucleotide variant |
TJP2-related disorder [RCV003915711]|not provided [RCV000598022] |
Chr9:69230190 [GRCh38] Chr9:71845106 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.590_601del (p.Arg197_Ser200del) |
deletion |
not provided [RCV000599206] |
Chr9:69221126..69221137 [GRCh38] Chr9:71836042..71836053 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2279C>T (p.Thr760Met) |
single nucleotide variant |
Inborn genetic diseases [RCV004024772]|not provided [RCV000593317] |
Chr9:69238713 [GRCh38] Chr9:71853629 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3392C>T (p.Thr1131Met) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002491225]|Inborn genetic diseases [RCV003343938]|TJP2-related disorder [RCV003420048]|not provided [RCV000593360] |
Chr9:69252885 [GRCh38] Chr9:71867801 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_001170414.2(TJP2):c.-10G>A |
single nucleotide variant |
not provided [RCV000593570] |
Chr9:69151771 [GRCh38] Chr9:71766687 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1656A>G (p.Gly552=) |
single nucleotide variant |
not provided [RCV000596474] |
Chr9:69230217 [GRCh38] Chr9:71845133 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.972G>T (p.Gly324=) |
single nucleotide variant |
TJP2-related disorder [RCV003983140]|not provided [RCV000593817] |
Chr9:69225323 [GRCh38] Chr9:71840239 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2450C>G (p.Ser817Cys) |
single nucleotide variant |
not provided [RCV000584840] |
Chr9:69240031 [GRCh38] Chr9:71854947 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.122A>G (p.Lys41Arg) |
single nucleotide variant |
not provided [RCV000591447] |
Chr9:69216346 [GRCh38] Chr9:71831262 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1454-6C>T |
single nucleotide variant |
not provided [RCV000598195] |
Chr9:69229178 [GRCh38] Chr9:71844094 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3067_3068delinsTT (p.Ala1023Phe) |
indel |
TJP2-related disorder [RCV003905550]|not provided [RCV000591571] |
Chr9:69251110..69251111 [GRCh38] Chr9:71866026..71866027 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2353C>T (p.Gln785Ter) |
single nucleotide variant |
not provided [RCV000730587] |
Chr9:69238787 [GRCh38] Chr9:71853703 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.631C>T (p.Arg211Cys) |
single nucleotide variant |
not provided [RCV000730598] |
Chr9:69221175 [GRCh38] Chr9:71836091 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3076G>A (p.Glu1026Lys) |
single nucleotide variant |
TJP2-related disorder [RCV003938107]|not provided [RCV000730657] |
Chr9:69251119 [GRCh38] Chr9:71866035 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2034C>T (p.Asn678=) |
single nucleotide variant |
TJP2-related disorder [RCV003965524]|not provided [RCV000730660] |
Chr9:69236991 [GRCh38] Chr9:71851907 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2566G>A (p.Ala856Thr) |
single nucleotide variant |
not provided [RCV000731018] |
Chr9:69240147 [GRCh38] Chr9:71855063 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3150G>A (p.Leu1050=) |
single nucleotide variant |
not provided [RCV000731040] |
Chr9:69251193 [GRCh38] Chr9:71866109 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.115-7T>C |
single nucleotide variant |
not provided [RCV000731052] |
Chr9:69216332 [GRCh38] Chr9:71831248 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2824G>A (p.Glu942Lys) |
single nucleotide variant |
Inborn genetic diseases [RCV002535250]|not provided [RCV000731989] |
Chr9:69248168 [GRCh38] Chr9:71863084 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3536A>C (p.Tyr1179Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV002535251]|not provided [RCV000731994] |
Chr9:69254337 [GRCh38] Chr9:71869253 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3522C>G (p.Ser1174=) |
single nucleotide variant |
not provided [RCV000731995] |
Chr9:69254323 [GRCh38] Chr9:71869239 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.333C>T (p.Val111=) |
single nucleotide variant |
not provided [RCV000732033] |
Chr9:69218350 [GRCh38] Chr9:71833266 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+80G>T |
single nucleotide variant |
not provided [RCV000733793] |
Chr9:69248304 [GRCh38] Chr9:71863220 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.212C>T (p.Pro71Leu) |
single nucleotide variant |
TJP2-related disorder [RCV004751690]|not provided [RCV000734330] |
Chr9:69216436 [GRCh38] Chr9:71831352 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.491A>G (p.His164Arg) |
single nucleotide variant |
not provided [RCV000728467] |
Chr9:69221035 [GRCh38] Chr9:71835951 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1506T>C (p.Asp502=) |
single nucleotide variant |
not provided [RCV000729610] |
Chr9:69229236 [GRCh38] Chr9:71844152 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.356C>A (p.Pro119His) |
single nucleotide variant |
not provided [RCV000731176] |
Chr9:69220900 [GRCh38] Chr9:71835816 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1433G>C (p.Arg478Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002536461]|not provided [RCV000731289] |
Chr9:69228094 [GRCh38] Chr9:71843010 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.981C>A (p.Ile327=) |
single nucleotide variant |
TJP2-related disorder [RCV003908040]|not provided [RCV000731301] |
Chr9:69225332 [GRCh38] Chr9:71840248 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.896C>A (p.Pro299His) |
single nucleotide variant |
Inborn genetic diseases [RCV004027051]|not provided [RCV000733091] |
Chr9:69221440 [GRCh38] Chr9:71836356 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1475C>T (p.Pro492Leu) |
single nucleotide variant |
not provided [RCV000733845] |
Chr9:69229205 [GRCh38] Chr9:71844121 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1138G>C (p.Val380Leu) |
single nucleotide variant |
not provided [RCV000734385] |
Chr9:69226103 [GRCh38] Chr9:71841019 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.985G>A (p.Val329Ile) |
single nucleotide variant |
not provided [RCV000728527] |
Chr9:69225336 [GRCh38] Chr9:71840252 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7308C>A |
single nucleotide variant |
not provided [RCV000730284] |
Chr9:69205240 [GRCh38] Chr9:71820156 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.966G>T (p.Arg322=) |
single nucleotide variant |
not provided [RCV000733172] |
Chr9:69225317 [GRCh38] Chr9:71840233 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1576G>T (p.Ala526Ser) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002477725]|not provided [RCV000733191] |
Chr9:69230137 [GRCh38] Chr9:71845053 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.142G>A (p.Val48Met) |
single nucleotide variant |
Inborn genetic diseases [RCV004678812]|not provided [RCV000734405] |
Chr9:69216366 [GRCh38] Chr9:71831282 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1243del (p.Ser415fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV000415040] |
Chr9:69227794 [GRCh38] Chr9:71842710 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1018A>G (p.Lys340Glu) |
single nucleotide variant |
Inborn genetic diseases [RCV002535092]|not provided [RCV000728779] |
Chr9:69225369 [GRCh38] Chr9:71840285 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1490G>A (p.Arg497His) |
single nucleotide variant |
Inborn genetic diseases [RCV003243278]|TJP2-related disorder [RCV004751685]|not provided [RCV000730400] |
Chr9:69229220 [GRCh38] Chr9:71844136 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3483C>T (p.Ala1161=) |
single nucleotide variant |
not provided [RCV000731393] |
Chr9:69254284 [GRCh38] Chr9:71869200 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.274C>G (p.Pro92Ala) |
single nucleotide variant |
not provided [RCV000731396] |
Chr9:69218291 [GRCh38] Chr9:71833207 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2277A>C (p.Lys759Asn) |
single nucleotide variant |
Inborn genetic diseases [RCV004678808]|not provided [RCV000731429] |
Chr9:69238711 [GRCh38] Chr9:71853627 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+5G>A |
single nucleotide variant |
not provided [RCV000732332] |
Chr9:69248229 [GRCh38] Chr9:71863145 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.64C>G (p.Pro22Ala) |
single nucleotide variant |
not provided [RCV000734551] |
Chr9:69212551 [GRCh38] Chr9:71827467 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3183T>G (p.Gly1061=) |
single nucleotide variant |
not provided [RCV000732434] |
Chr9:69251226 [GRCh38] Chr9:71866142 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1052T>A (p.Leu351His) |
single nucleotide variant |
not provided [RCV000732489] |
Chr9:69225403 [GRCh38] Chr9:71840319 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.629C>G (p.Ala210Gly) |
single nucleotide variant |
Inborn genetic diseases [RCV004027079]|TJP2-related disorder [RCV003983193]|not provided [RCV000734102] |
Chr9:69221173 [GRCh38] Chr9:71836089 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.2509C>T (p.Arg837Ter) |
single nucleotide variant |
TJP2-related disorder [RCV003892676]|not provided [RCV000734731] |
Chr9:69240090 [GRCh38] Chr9:71855006 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.897T>A (p.Pro299=) |
single nucleotide variant |
not provided [RCV000734735] |
Chr9:69221441 [GRCh38] Chr9:71836357 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.37C>T (p.Arg13Trp) |
single nucleotide variant |
not provided [RCV000732525] |
Chr9:69174409 [GRCh38] Chr9:71789325 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7267A>G |
single nucleotide variant |
TJP2-related disorder [RCV003947942]|not provided [RCV000732559] |
Chr9:69205281 [GRCh38] Chr9:71820197 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.638G>A (p.Arg213Gln) |
single nucleotide variant |
not provided [RCV000733556] |
Chr9:69221182 [GRCh38] Chr9:71836098 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7391A>C |
single nucleotide variant |
not provided [RCV000733564] |
Chr9:69205157 [GRCh38] Chr9:71820073 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2961G>A (p.Pro987=) |
single nucleotide variant |
TJP2-related disorder [RCV003908055]|not provided [RCV000734181] |
Chr9:69249455 [GRCh38] Chr9:71864371 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1995T>A (p.Ala665=) |
single nucleotide variant |
not provided [RCV000732690] |
Chr9:69236952 [GRCh38] Chr9:71851868 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1087T>C (p.Leu363=) |
single nucleotide variant |
not provided [RCV000733661] |
Chr9:69226052 [GRCh38] Chr9:71840968 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2841G>A (p.Ser947=) |
single nucleotide variant |
not provided [RCV000734197] |
Chr9:69248185 [GRCh38] Chr9:71863101 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1056+8G>C |
single nucleotide variant |
not provided [RCV000734201] |
Chr9:69225415 [GRCh38] Chr9:71840331 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.334G>A (p.Ala112Thr) |
single nucleotide variant |
TJP2-related disorder [RCV004751689]|not provided [RCV000734217] |
Chr9:69218351 [GRCh38] Chr9:71833267 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.813_814del (p.Ala273fs) |
microsatellite |
Cholestasis, progressive familial intrahepatic, 4 [RCV000505572] |
Chr9:69221354..69221355 [GRCh38] Chr9:71836270..71836271 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3322A>G (p.Ile1108Val) |
single nucleotide variant |
Inborn genetic diseases [RCV004026977]|not provided [RCV000729672] |
Chr9:69252815 [GRCh38] Chr9:71867731 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+105G>A |
single nucleotide variant |
not provided [RCV000729757] |
Chr9:69248329 [GRCh38] Chr9:71863245 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1337C>A (p.Pro446Gln) |
single nucleotide variant |
not provided [RCV000731670] |
Chr9:69227998 [GRCh38] Chr9:71842914 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1211-4C>T |
single nucleotide variant |
not provided [RCV000730774] |
Chr9:69227761 [GRCh38] Chr9:71842677 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.*6T>C |
single nucleotide variant |
not provided [RCV000732891] |
Chr9:69254380 [GRCh38] Chr9:71869296 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-301T>C |
single nucleotide variant |
not provided [RCV001572093] |
Chr9:69212247 [GRCh38] Chr9:71827163 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1273GATTAT[1] (p.425DY[1]) |
microsatellite |
not provided [RCV000729207] |
Chr9:69227826..69227831 [GRCh38] Chr9:71842742..71842747 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3138del (p.Arg1047fs) |
deletion |
not provided [RCV000730791] |
Chr9:69251179 [GRCh38] Chr9:71866095 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.229G>A (p.Gly77Arg) |
single nucleotide variant |
not provided [RCV000731914] |
Chr9:69216453 [GRCh38] Chr9:71831369 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2270C>T (p.Thr757Ile) |
single nucleotide variant |
TJP2-related disorder [RCV003908057]|not provided [RCV000734919] |
Chr9:69237968 [GRCh38] Chr9:71852884 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1336C>A (p.Pro446Thr) |
single nucleotide variant |
not provided [RCV000731928] |
Chr9:69227997 [GRCh38] Chr9:71842913 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1290_1292del (p.Ser432del) |
deletion |
not provided [RCV000731003] |
Chr9:69227842..69227844 [GRCh38] Chr9:71842758..71842760 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.699GGACCG[3] (p.234DR[4]) |
microsatellite |
not provided [RCV000734257] |
Chr9:69221239..69221240 [GRCh38] Chr9:71836155..71836156 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.115-10T>C |
single nucleotide variant |
not provided [RCV000729458] |
Chr9:69216329 [GRCh38] Chr9:71831245 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7293C>G |
single nucleotide variant |
TJP2-related disorder [RCV003392562]|not provided [RCV000729486] |
Chr9:69205255 [GRCh38] Chr9:71820171 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p24.3-q34.3(chr9:62525-141006407) |
copy number gain |
See cases [RCV000449375] |
Chr9:62525..141006407 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
NC_000009.11:g.(71833276_71835802)_(71855064_71861605)dup |
duplication |
Cholestasis, progressive familial intrahepatic, 4 [RCV000449507] |
Chr9:69220886..69240148 [GRCh38] Chr9:71835802..71855064 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1210G>A (p.Asp404Asn) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000449597]|TJP2-related disorder [RCV003422418] |
Chr9:69226175 [GRCh38] Chr9:71841091 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020389)x3 |
copy number gain |
not specified [RCV003986800] |
Chr9:203861..141020389 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9p24.3-q34.3(chr9:203864-141020389)x3 |
copy number gain |
See cases [RCV000448978] |
Chr9:203864..141020389 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9q21.11(chr9:71599176-71849431)x3 |
copy number gain |
See cases [RCV000448375] |
Chr9:71599176..71849431 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2632C>T (p.Gln878Ter) |
single nucleotide variant |
not provided [RCV000498891] |
Chr9:69246755 [GRCh38] Chr9:71861671 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
GRCh37/hg19 9q21.11-21.13(chr9:71079379-75905808)x1 |
copy number loss |
See cases [RCV000511817] |
Chr9:71079379..75905808 [GRCh37] Chr9:9q21.11-21.13 |
likely pathogenic |
GRCh37/hg19 9q21.11-21.31(chr9:68734571-83557267)x3 |
copy number gain |
See cases [RCV000510725] |
Chr9:68734571..83557267 [GRCh37] Chr9:9q21.11-21.31 |
pathogenic |
GRCh37/hg19 9q21.11(chr9:71515614-71991318)x3 |
copy number gain |
See cases [RCV000511272] |
Chr9:71515614..71991318 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11(chr9:71395537-71967664)x3 |
copy number gain |
See cases [RCV000511186] |
Chr9:71395537..71967664 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1631C>T (p.Ala544Val) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002476311]|not provided [RCV000595631] |
Chr9:69230192 [GRCh38] Chr9:71845108 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3405G>A (p.Thr1135=) |
single nucleotide variant |
TJP2-related disorder [RCV003962729]|not provided [RCV000594535]|not specified [RCV001662645] |
Chr9:69252898 [GRCh38] Chr9:71867814 [GRCh37] Chr9:9q21.11 |
benign|likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.630G>A (p.Ala210=) |
single nucleotide variant |
not provided [RCV000596544] |
Chr9:69221174 [GRCh38] Chr9:71836090 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+40G>A |
single nucleotide variant |
not provided [RCV000595116] |
Chr9:69248264 [GRCh38] Chr9:71863180 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2027G>C (p.Arg676Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003288737]|TJP2-related disorder [RCV004750886]|not provided [RCV003313328] |
Chr9:69236984 [GRCh38] Chr9:71851900 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.2962C>T (p.Pro988Ser) |
single nucleotide variant |
not provided [RCV000594021] |
Chr9:69249456 [GRCh38] Chr9:71864372 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2297G>T (p.Gly766Val) |
single nucleotide variant |
Inborn genetic diseases [RCV002532425]|not provided [RCV000594683] |
Chr9:69238731 [GRCh38] Chr9:71853647 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1625C>T (p.Thr542Ile) |
single nucleotide variant |
Inborn genetic diseases [RCV003286206] |
Chr9:69230186 [GRCh38] Chr9:71845102 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.474G>A (p.Arg158=) |
single nucleotide variant |
not provided [RCV000594787] |
Chr9:69221018 [GRCh38] Chr9:71835934 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11-34.3(chr9:71069743-140999928) |
copy number gain |
Global developmental delay [RCV000626548] |
Chr9:71069743..140999928 [GRCh37] Chr9:9q21.11-34.3 |
likely pathogenic |
NM_004817.4(TJP2):c.412C>T (p.Arg138Trp) |
single nucleotide variant |
Inborn genetic diseases [RCV003272002] |
Chr9:69220956 [GRCh38] Chr9:71835872 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2726C>T (p.Ala909Val) |
single nucleotide variant |
Autosomal dominant nonsyndromic hearing loss 51 [RCV004584766]|not provided [RCV000594655] |
Chr9:69248070 [GRCh38] Chr9:71862986 [GRCh37] Chr9:9q21.11 |
likely pathogenic|uncertain significance |
NM_004817.4(TJP2):c.1909C>T (p.Leu637=) |
single nucleotide variant |
not provided [RCV000594846] |
Chr9:69236156 [GRCh38] Chr9:71851072 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3225C>T (p.Pro1075=) |
single nucleotide variant |
TJP2-related disorder [RCV003917942]|not provided [RCV002065441]|not specified [RCV000608475] |
Chr9:69251268 [GRCh38] Chr9:71866184 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1005G>A (p.Thr335=) |
single nucleotide variant |
TJP2-related disorder [RCV003953048]|not provided [RCV000916236] |
Chr9:69225356 [GRCh38] Chr9:71840272 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.-26G>A |
single nucleotide variant |
not specified [RCV000603693] |
Chr9:69174347 [GRCh38] Chr9:71789263 [GRCh37] Chr9:9q21.11 |
likely benign |
GRCh37/hg19 9q21.11-22.1(chr9:70966262-90761254)x4 |
copy number gain |
See cases [RCV000512280] |
Chr9:70966262..90761254 [GRCh37] Chr9:9q21.11-22.1 |
pathogenic |
NM_004817.4(TJP2):c.1451del (p.Pro484fs) |
deletion |
not provided [RCV000593956] |
Chr9:69228107 [GRCh38] Chr9:71843023 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3140G>A (p.Arg1047Gln) |
single nucleotide variant |
not provided [RCV000512776] |
Chr9:69251183 [GRCh38] Chr9:71866099 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3140G>C (p.Arg1047Pro) |
single nucleotide variant |
Inborn genetic diseases [RCV003160055]|TJP2-related disorder [RCV004751624]|not provided [RCV000596417] |
Chr9:69251183 [GRCh38] Chr9:71866099 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p24.3-q21.33(chr9:203861-88189913)x3 |
copy number gain |
See cases [RCV000512431] |
Chr9:203861..88189913 [GRCh37] Chr9:9p24.3-q21.33 |
pathogenic |
NM_004817.4(TJP2):c.848G>A (p.Arg283Gln) |
single nucleotide variant |
TJP2-related disorder [RCV003980110]|not provided [RCV000597729] |
Chr9:69221392 [GRCh38] Chr9:71836308 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
GRCh37/hg19 9p24.3-q34.3(chr9:203862-141020389) |
copy number gain |
See cases [RCV000512392] |
Chr9:203862..141020389 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
Single allele |
duplication |
not provided [RCV000677946] |
Chr9:71606365..71821182 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11-21.32(chr9:68999534-84656998)x1 |
copy number loss |
not provided [RCV000683169] |
Chr9:68999534..84656998 [GRCh37] Chr9:9q21.11-21.32 |
pathogenic |
GRCh37/hg19 9p24.3-q21.12(chr9:203861-72717793)x3 |
copy number gain |
not provided [RCV000683176] |
Chr9:203861..72717793 [GRCh37] Chr9:9p24.3-q21.12 |
pathogenic |
NM_004817.4(TJP2):c.2276-161G>C |
single nucleotide variant |
not provided [RCV001546723] |
Chr9:69238549 [GRCh38] Chr9:71853465 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2356-49A>G |
single nucleotide variant |
not provided [RCV001566459] |
Chr9:69239888 [GRCh38] Chr9:71854804 [GRCh37] Chr9:9q21.11 |
likely benign |
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141114095)x2 |
copy number gain |
not provided [RCV000748054] |
Chr9:10590..141114095 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9q21.11-21.31(chr9:68838523-83340723)x1 |
copy number loss |
not provided [RCV000748447] |
Chr9:68838523..83340723 [GRCh37] Chr9:9q21.11-21.31 |
pathogenic |
GRCh37/hg19 9q21.11(chr9:71741320-71746253)x0 |
copy number loss |
not provided [RCV000748458] |
Chr9:71741320..71746253 [GRCh37] Chr9:9q21.11 |
benign |
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141122247)x3 |
copy number gain |
not provided [RCV000748055] |
Chr9:10590..141122247 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9p24.3-q34.3(chr9:10590-141107672)x3 |
copy number gain |
not provided [RCV000748053] |
Chr9:10590..141107672 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9p24.3-q34.3(chr9:46587-141066491)x3 |
copy number gain |
not provided [RCV000748063] |
Chr9:46587..141066491 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.3(TJP2):c.-133C>T |
single nucleotide variant |
not provided [RCV001692720] |
Chr9:69174240 [GRCh38] Chr9:71789156 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1157del (p.Gln386fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV001564054] |
Chr9:69226122 [GRCh38] Chr9:71841038 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2493G>A (p.Thr831=) |
single nucleotide variant |
not provided [RCV000916928] |
Chr9:69240074 [GRCh38] Chr9:71854990 [GRCh37] Chr9:9q21.11 |
likely benign |
Single allele |
complex |
Glioma [RCV000754871] |
Chr9:23524426..87359888 [GRCh37] Chr9:9p21.3-q21.33 |
likely pathogenic |
NM_004817.4(TJP2):c.1211-290C>T |
single nucleotide variant |
not provided [RCV001679669] |
Chr9:69227475 [GRCh38] Chr9:71842391 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1430C>A (p.Pro477His) |
single nucleotide variant |
not provided [RCV001571484] |
Chr9:69228091 [GRCh38] Chr9:71843007 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-6929A>G |
single nucleotide variant |
not provided [RCV001576784] |
Chr9:69205619 [GRCh38] Chr9:71820535 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1991+54A>G |
single nucleotide variant |
not provided [RCV001691439] |
Chr9:69236292 [GRCh38] Chr9:71851208 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1000C>T (p.Arg334Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000855542] |
Chr9:69225351 [GRCh38] Chr9:71840267 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.240-231C>T |
single nucleotide variant |
not provided [RCV001547367] |
Chr9:69218026 [GRCh38] Chr9:71832942 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2668-34G>A |
single nucleotide variant |
not provided [RCV001552133] |
Chr9:69247978 [GRCh38] Chr9:71862894 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3408-99C>T |
single nucleotide variant |
not provided [RCV001689438] |
Chr9:69254110 [GRCh38] Chr9:71869026 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.952+74del |
deletion |
not provided [RCV001548085] |
Chr9:69221560 [GRCh38] Chr9:71836476 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2209G>A (p.Gly737Ser) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993655]|Melnick-Fraser syndrome [RCV001375126] |
Chr9:69237907 [GRCh38] Chr9:71852823 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.1234C>T (p.Arg412Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993661] |
Chr9:69227788 [GRCh38] Chr9:71842704 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3450T>C (p.Tyr1150=) |
single nucleotide variant |
not provided [RCV000901753] |
Chr9:69254251 [GRCh38] Chr9:71869167 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2553A>C (p.Ala851=) |
single nucleotide variant |
not provided [RCV000880417] |
Chr9:69240134 [GRCh38] Chr9:71855050 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1438_1454del (p.Gln480fs) |
deletion |
not provided [RCV001042122] |
Chr9:69228098..69228114 [GRCh38] Chr9:71843014..71843030 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1885dup (p.Glu629fs) |
duplication |
not provided [RCV001047644] |
Chr9:69236128..69236129 [GRCh38] Chr9:71851044..71851045 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3322-2A>C |
single nucleotide variant |
not provided [RCV001558062] |
Chr9:69252813 [GRCh38] Chr9:71867729 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1894C>T (p.Arg632Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993663]|Hypercholanemia, familial 1 [RCV003987702] |
Chr9:69236141 [GRCh38] Chr9:71851057 [GRCh37] Chr9:9q21.11 |
pathogenic|uncertain significance |
NM_004817.4(TJP2):c.1337C>T (p.Pro446Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV003270253] |
Chr9:69227998 [GRCh38] Chr9:71842914 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7A>G |
single nucleotide variant |
not provided [RCV000839976] |
Chr9:69212541 [GRCh38] Chr9:71827457 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1056+73C>A |
single nucleotide variant |
not provided [RCV000842820] |
Chr9:69225480 [GRCh38] Chr9:71840396 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.3407+45A>G |
single nucleotide variant |
not provided [RCV000842882] |
Chr9:69252945 [GRCh38] Chr9:71867861 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1292C>G (p.Ser431Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993657] |
Chr9:69227846 [GRCh38] Chr9:71842762 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1557C>T (p.Asp519=) |
single nucleotide variant |
not provided [RCV000827230] |
Chr9:69230118 [GRCh38] Chr9:71845034 [GRCh37] Chr9:9q21.11 |
likely benign |
GRCh37/hg19 9q21.11(chr9:71415902-71996013)x3 |
copy number gain |
not provided [RCV000848744] |
Chr9:71415902..71996013 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11(chr9:71415902-71971195)x3 |
copy number gain |
not provided [RCV000847541] |
Chr9:71415902..71971195 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2908C>T (p.Arg970Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993656] |
Chr9:69249402 [GRCh38] Chr9:71864318 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.115-2A>C |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993662] |
Chr9:69216337 [GRCh38] Chr9:71831253 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1780+78G>C |
single nucleotide variant |
not provided [RCV000842881] |
Chr9:69234625 [GRCh38] Chr9:71849541 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.60+39CGTGAG[3] |
microsatellite |
not provided [RCV000842943] |
Chr9:69174470..69174471 [GRCh38] Chr9:71789386..71789387 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.3500G>T (p.Arg1167Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV004030160]|not provided [RCV000993328] |
Chr9:69254301 [GRCh38] Chr9:71869217 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11(chr9:71458419-71776105)x3 |
copy number gain |
not provided [RCV000846063] |
Chr9:71458419..71776105 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2180-5T>G |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993658] |
Chr9:69237873 [GRCh38] Chr9:71852789 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
GRCh37/hg19 9q21.11-34.3(chr9:71416475-141020389)x3 |
copy number gain |
not provided [RCV000847808] |
Chr9:71416475..141020389 [GRCh37] Chr9:9q21.11-34.3 |
pathogenic |
NM_004817.4(TJP2):c.236T>G (p.Leu79Arg) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993652] |
Chr9:69216460 [GRCh38] Chr9:71831376 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.1574T>C (p.Leu525Ser) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993653] |
Chr9:69230135 [GRCh38] Chr9:71845051 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.1672-1G>A |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993654] |
Chr9:69234438 [GRCh38] Chr9:71849354 [GRCh37] Chr9:9q21.11 |
pathogenic |
GRCh37/hg19 9q21.11(chr9:71533382-71987060)x3 |
copy number gain |
not provided [RCV000846790] |
Chr9:71533382..71987060 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1053C>T (p.Leu351=) |
single nucleotide variant |
not provided [RCV001564179] |
Chr9:69225404 [GRCh38] Chr9:71840320 [GRCh37] Chr9:9q21.11 |
likely benign |
GRCh37/hg19 9q21.11-21.31(chr9:70974661-81829792)x1 |
copy number loss |
not provided [RCV000846367] |
Chr9:70974661..81829792 [GRCh37] Chr9:9q21.11-21.31 |
pathogenic |
GRCh37/hg19 9p24.3-q34.3(chr9:203861-141020388)x3 |
copy number gain |
not provided [RCV000845900] |
Chr9:203861..141020388 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
NM_004817.4(TJP2):c.1776C>T (p.Ala592=) |
single nucleotide variant |
TJP2-related disorder [RCV003900931]|not provided [RCV003104430] |
Chr9:69234543 [GRCh38] Chr9:71849459 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1671+110C>G |
single nucleotide variant |
not provided [RCV001544627] |
Chr9:69230342 [GRCh38] Chr9:71845258 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2880+136G>C |
single nucleotide variant |
not provided [RCV001568566] |
Chr9:69248360 [GRCh38] Chr9:71863276 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.239+16C>T |
single nucleotide variant |
not provided [RCV001572053] |
Chr9:69216479 [GRCh38] Chr9:71831395 [GRCh37] Chr9:9q21.11 |
benign|likely benign |
NM_004817.4(TJP2):c.2356-229G>A |
single nucleotide variant |
not provided [RCV001581605] |
Chr9:69239708 [GRCh38] Chr9:71854624 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1672-28_1672-27dup |
duplication |
not provided [RCV001577360] |
Chr9:69234398..69234399 [GRCh38] Chr9:71849314..71849315 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1197C>T (p.Asp399=) |
single nucleotide variant |
not provided [RCV001567896] |
Chr9:69226162 [GRCh38] Chr9:71841078 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.120del (p.Arg42fs) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV004556896] |
Chr9:69216343 [GRCh38] Chr9:71831259 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.3(TJP2):c.-185G>A |
single nucleotide variant |
not provided [RCV001657341] |
Chr9:69174188 [GRCh38] Chr9:71789104 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.342+111C>T |
single nucleotide variant |
not provided [RCV001553410] |
Chr9:69218470 [GRCh38] Chr9:71833386 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.638G>T (p.Arg213Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV002573323]|not provided [RCV001583753] |
Chr9:69221182 [GRCh38] Chr9:71836098 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_001170414.2(TJP2):c.-10+22063G>A |
single nucleotide variant |
not provided [RCV001555500] |
Chr9:69173834 [GRCh38] Chr9:71788750 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2180-34G>A |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838712]|Hypercholanemia, familial 1 [RCV001838711]|not provided [RCV001617963] |
Chr9:69237844 [GRCh38] Chr9:71852760 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1781-115G>A |
single nucleotide variant |
not provided [RCV001671955] |
Chr9:69235913 [GRCh38] Chr9:71850829 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1991+117C>T |
single nucleotide variant |
not provided [RCV001713960] |
Chr9:69236355 [GRCh38] Chr9:71851271 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1780+303C>T |
single nucleotide variant |
not provided [RCV001612593] |
Chr9:69234850 [GRCh38] Chr9:71849766 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1520+184G>A |
single nucleotide variant |
not provided [RCV001556571] |
Chr9:69229434 [GRCh38] Chr9:71844350 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2356-126C>G |
single nucleotide variant |
not provided [RCV001649475] |
Chr9:69239811 [GRCh38] Chr9:71854727 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.61-7692T>C |
single nucleotide variant |
not provided [RCV001663270] |
Chr9:69204856 [GRCh38] Chr9:71819772 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.61-7416G>A |
single nucleotide variant |
not provided [RCV001562135] |
Chr9:69205132 [GRCh38] Chr9:71820048 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2180-275_2180-274insGTAGGAGGATCGCTTGAG |
insertion |
not provided [RCV001669622] |
Chr9:69237596..69237597 [GRCh38] Chr9:71852512..71852513 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2668-30C>T |
single nucleotide variant |
not provided [RCV001589595] |
Chr9:69247982 [GRCh38] Chr9:71862898 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3407+33C>T |
single nucleotide variant |
not provided [RCV001557936] |
Chr9:69252933 [GRCh38] Chr9:71867849 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1211-302A>T |
single nucleotide variant |
not provided [RCV001613865] |
Chr9:69227463 [GRCh38] Chr9:71842379 [GRCh37] Chr9:9q21.11 |
benign |
NM_001170414.2(TJP2):c.-10+22244C>T |
single nucleotide variant |
not provided [RCV001589712] |
Chr9:69174015 [GRCh38] Chr9:71788931 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2081G>A (p.Gly694Glu) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV002476891]|not provided [RCV001589719] |
Chr9:69237038 [GRCh38] Chr9:71851954 [GRCh37] Chr9:9q21.11 |
conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.1991+261G>A |
single nucleotide variant |
not provided [RCV001614163] |
Chr9:69236499 [GRCh38] Chr9:71851415 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.342+102C>T |
single nucleotide variant |
not provided [RCV001657598] |
Chr9:69218461 [GRCh38] Chr9:71833377 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.343-117T>C |
single nucleotide variant |
not provided [RCV001546543] |
Chr9:69220770 [GRCh38] Chr9:71835686 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2276-171G>A |
single nucleotide variant |
not provided [RCV001587799] |
Chr9:69238539 [GRCh38] Chr9:71853455 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.114+101T>C |
single nucleotide variant |
not provided [RCV001611871] |
Chr9:69212702 [GRCh38] Chr9:71827618 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.303A>G (p.Ala101=) |
single nucleotide variant |
not provided [RCV000932374] |
Chr9:69218320 [GRCh38] Chr9:71833236 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1713C>A (p.Ala571=) |
single nucleotide variant |
not provided [RCV000931110] |
Chr9:69234480 [GRCh38] Chr9:71849396 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2327del (p.Arg775_Leu776insTer) |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV001250179] |
Chr9:69238760 [GRCh38] Chr9:71853676 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.115-1G>A |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993659] |
Chr9:69216338 [GRCh38] Chr9:71831254 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2173C>T (p.Arg725Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV000993660] |
Chr9:69237130 [GRCh38] Chr9:71852046 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2567-342C>T |
single nucleotide variant |
not provided [RCV001551265] |
Chr9:69246348 [GRCh38] Chr9:71861264 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2991+20A>G |
single nucleotide variant |
not provided [RCV002681096] |
Chr9:69249505 [GRCh38] Chr9:71864421 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2667+29G>C |
single nucleotide variant |
not provided [RCV001563207] |
Chr9:69246819 [GRCh38] Chr9:71861735 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2992-116G>A |
single nucleotide variant |
not provided [RCV001598039] |
Chr9:69250919 [GRCh38] Chr9:71865835 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1781-188A>G |
single nucleotide variant |
not provided [RCV001563542] |
Chr9:69235840 [GRCh38] Chr9:71850756 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.952+52T>C |
single nucleotide variant |
not provided [RCV001559450] |
Chr9:69221548 [GRCh38] Chr9:71836464 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1671+181A>G |
single nucleotide variant |
not provided [RCV001559720] |
Chr9:69230413 [GRCh38] Chr9:71845329 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2668-89G>A |
single nucleotide variant |
not provided [RCV001568690] |
Chr9:69247923 [GRCh38] Chr9:71862839 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1817C>T (p.Ser606Leu) |
single nucleotide variant |
not provided [RCV001658942] |
Chr9:69236064 [GRCh38] Chr9:71850980 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-7456A>G |
single nucleotide variant |
not provided [RCV001595389] |
Chr9:69205092 [GRCh38] Chr9:71820008 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1672-67_1672-66dup |
duplication |
not provided [RCV001592006] |
Chr9:69234367..69234368 [GRCh38] Chr9:71849283..71849284 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2356-115AAAC[3] |
microsatellite |
not provided [RCV001713616] |
Chr9:69239822..69239825 [GRCh38] Chr9:71854738..71854741 [GRCh37] Chr9:9q21.11 |
benign |
NM_001170414.2(TJP2):c.-10+22262C>A |
single nucleotide variant |
not provided [RCV001659325] |
Chr9:69174033 [GRCh38] Chr9:71788949 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1210+243T>C |
single nucleotide variant |
not provided [RCV001527999] |
Chr9:69226418 [GRCh38] Chr9:71841334 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1672-68TTTC[9] |
microsatellite |
not provided [RCV001597710] |
Chr9:69234370..69234371 [GRCh38] Chr9:71849286..71849287 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.3321+162C>T |
single nucleotide variant |
not provided [RCV001720886] |
Chr9:69251526 [GRCh38] Chr9:71866442 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.953-295G>C |
single nucleotide variant |
not provided [RCV001678184] |
Chr9:69225009 [GRCh38] Chr9:71839925 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.343-28G>A |
single nucleotide variant |
not provided [RCV001596339] |
Chr9:69220859 [GRCh38] Chr9:71835775 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2668-90C>T |
single nucleotide variant |
not provided [RCV001596377] |
Chr9:69247922 [GRCh38] Chr9:71862838 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.953-175T>G |
single nucleotide variant |
not provided [RCV001617474] |
Chr9:69225129 [GRCh38] Chr9:71840045 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2667+139A>G |
single nucleotide variant |
not provided [RCV001595742] |
Chr9:69246929 [GRCh38] Chr9:71861845 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2668-271A>T |
single nucleotide variant |
not provided [RCV001637907] |
Chr9:69247741 [GRCh38] Chr9:71862657 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2566+207A>G |
single nucleotide variant |
not provided [RCV001594704] |
Chr9:69240354 [GRCh38] Chr9:71855270 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1780+55A>T |
single nucleotide variant |
not provided [RCV001614988] |
Chr9:69234602 [GRCh38] Chr9:71849518 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.61-7801G>T |
single nucleotide variant |
not provided [RCV001687379] |
Chr9:69204747 [GRCh38] Chr9:71819663 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2356-84C>G |
single nucleotide variant |
not provided [RCV001677232] |
Chr9:69239853 [GRCh38] Chr9:71854769 [GRCh37] Chr9:9q21.11 |
benign |
9q21.11 duplication |
duplication |
Autosomal dominant nonsyndromic hearing loss 51 [RCV001004809] |
Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2566+59G>A |
single nucleotide variant |
not provided [RCV001541721] |
Chr9:69240206 [GRCh38] Chr9:71855122 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2668-249G>A |
single nucleotide variant |
not provided [RCV001586550] |
Chr9:69247763 [GRCh38] Chr9:71862679 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1672-183C>G |
single nucleotide variant |
not provided [RCV001611731] |
Chr9:69234256 [GRCh38] Chr9:71849172 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.952+39A>G |
single nucleotide variant |
not provided [RCV001671447] |
Chr9:69221535 [GRCh38] Chr9:71836451 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.239+173dup |
duplication |
not provided [RCV001708627] |
Chr9:69216635..69216636 [GRCh38] Chr9:71831551..71831552 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1672-27del |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV001838798]|Hypercholanemia, familial 1 [RCV001838797]|not provided [RCV001691552] |
Chr9:69234399 [GRCh38] Chr9:71849315 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.952+160T>C |
single nucleotide variant |
not provided [RCV001670221] |
Chr9:69221656 [GRCh38] Chr9:71836572 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1672-68TTTC[8] |
microsatellite |
not provided [RCV001610216] |
Chr9:69234370..69234371 [GRCh38] Chr9:71849286..71849287 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1780+318C>T |
single nucleotide variant |
not provided [RCV001590121] |
Chr9:69234865 [GRCh38] Chr9:71849781 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1672-68TTTC[6] |
microsatellite |
not provided [RCV001696131] |
Chr9:69234371..69234374 [GRCh38] Chr9:71849287..71849290 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2668-111C>A |
single nucleotide variant |
not provided [RCV001709147] |
Chr9:69247901 [GRCh38] Chr9:71862817 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1781-91G>A |
single nucleotide variant |
not provided [RCV001691757] |
Chr9:69235937 [GRCh38] Chr9:71850853 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1056+155A>T |
single nucleotide variant |
not provided [RCV001690760] |
Chr9:69225562 [GRCh38] Chr9:71840478 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1594G>A (p.Gly532Arg) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001706957]|not provided [RCV002466689] |
Chr9:69230155 [GRCh38] Chr9:71845071 [GRCh37] Chr9:9q21.11 |
pathogenic|uncertain significance |
NM_004817.4(TJP2):c.115-229C>A |
single nucleotide variant |
not provided [RCV001694931] |
Chr9:69216110 [GRCh38] Chr9:71831026 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2645_2646dup (p.Val883fs) |
duplication |
Cholestasis, progressive familial intrahepatic, 4 [RCV001706958] |
Chr9:69246766..69246767 [GRCh38] Chr9:71861682..71861683 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.115-94T>G |
single nucleotide variant |
not provided [RCV001679624] |
Chr9:69216245 [GRCh38] Chr9:71831161 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.239+1G>A |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV001250178] |
Chr9:69216464 [GRCh38] Chr9:71831380 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.115-304G>A |
single nucleotide variant |
not provided [RCV001545660] |
Chr9:69216035 [GRCh38] Chr9:71830951 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2355+1G>T |
single nucleotide variant |
not provided [RCV001268656] |
Chr9:69238790 [GRCh38] Chr9:71853706 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.3407+22C>G |
single nucleotide variant |
not provided [RCV001581205] |
Chr9:69252922 [GRCh38] Chr9:71867838 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.343-4A>G |
single nucleotide variant |
not provided [RCV001311781] |
Chr9:69220883 [GRCh38] Chr9:71835799 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.659G>T (p.Ser220Ile) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV001332518] |
Chr9:69221203 [GRCh38] Chr9:71836119 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.61-6972G>C |
single nucleotide variant |
not provided [RCV001538735] |
Chr9:69205576 [GRCh38] Chr9:71820492 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2708A>C (p.Tyr903Ser) |
single nucleotide variant |
Hearing impairment [RCV001375071]|not provided [RCV001762658] |
Chr9:69248052 [GRCh38] Chr9:71862968 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+8G>A |
single nucleotide variant |
not provided [RCV001812317] |
Chr9:69248232 [GRCh38] Chr9:71863148 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2426T>C (p.Ile809Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003355844]|not provided [RCV002284613] |
Chr9:69240007 [GRCh38] Chr9:71854923 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.85T>C (p.Trp29Arg) |
single nucleotide variant |
Hearing impairment [RCV001375453] |
Chr9:69212572 [GRCh38] Chr9:71827488 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.464_473del (p.Gly154_Tyr155insTer) |
deletion |
not provided [RCV001389439] |
Chr9:69221008..69221017 [GRCh38] Chr9:71835924..71835933 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1884G>A (p.Gly628=) |
single nucleotide variant |
not provided [RCV001532162] |
Chr9:69236131 [GRCh38] Chr9:71851047 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2880+223C>T |
single nucleotide variant |
not provided [RCV001711009] |
Chr9:69248447 [GRCh38] Chr9:71863363 [GRCh37] Chr9:9q21.11 |
benign |
NM_001170414.2(TJP2):c.-10+22220G>A |
single nucleotide variant |
not provided [RCV001688554] |
Chr9:69173991 [GRCh38] Chr9:71788907 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2179+152A>G |
single nucleotide variant |
not provided [RCV001644054] |
Chr9:69237288 [GRCh38] Chr9:71852204 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1672-295A>G |
single nucleotide variant |
not provided [RCV001591446] |
Chr9:69234144 [GRCh38] Chr9:71849060 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2180-47C>T |
single nucleotide variant |
not provided [RCV001669721] |
Chr9:69237831 [GRCh38] Chr9:71852747 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1056+167T>C |
single nucleotide variant |
not provided [RCV001591974] |
Chr9:69225574 [GRCh38] Chr9:71840490 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.952+319G>A |
single nucleotide variant |
not provided [RCV001685956] |
Chr9:69221815 [GRCh38] Chr9:71836731 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1454-193dup |
duplication |
not provided [RCV001696555] |
Chr9:69228990..69228991 [GRCh38] Chr9:71843906..71843907 [GRCh37] Chr9:9q21.11 |
benign |
NC_000009.11:g.12246100_101559378inv |
inversion |
Recurrent spontaneous abortion [RCV000999471] |
Chr9:12246100..101559378 [GRCh37] Chr9:9p23-q22.33 |
likely pathogenic |
NM_004817.4(TJP2):c.3484GAG[3] (p.Glu1165del) |
microsatellite |
Cholestasis, progressive familial intrahepatic, 4 [RCV001728086] |
Chr9:69254285..69254287 [GRCh38] Chr9:71869201..71869203 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11(chr9:71746056-72142061)x3 |
copy number gain |
not provided [RCV001834386] |
Chr9:71746056..72142061 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2991+1_2991+2dup |
duplication |
not provided [RCV001770599] |
Chr9:69249485..69249486 [GRCh38] Chr9:71864401..71864402 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.821G>A (p.Arg274His) |
single nucleotide variant |
Inborn genetic diseases [RCV003163868]|not provided [RCV001758416] |
Chr9:69221365 [GRCh38] Chr9:71836281 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2645C>T (p.Ala882Val) |
single nucleotide variant |
not provided [RCV001754626] |
Chr9:69246768 [GRCh38] Chr9:71861684 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.720C>A (p.Ser240Arg) |
single nucleotide variant |
not provided [RCV001772621] |
Chr9:69221264 [GRCh38] Chr9:71836180 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2749C>T (p.Arg917Cys) |
single nucleotide variant |
not provided [RCV001754358] |
Chr9:69248093 [GRCh38] Chr9:71863009 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.984C>T (p.Phe328=) |
single nucleotide variant |
not provided [RCV001767202] |
Chr9:69225335 [GRCh38] Chr9:71840251 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2884A>G (p.Ile962Val) |
single nucleotide variant |
not provided [RCV001767266] |
Chr9:69249378 [GRCh38] Chr9:71864294 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2645C>A (p.Ala882Glu) |
single nucleotide variant |
not provided [RCV001773224] |
Chr9:69246768 [GRCh38] Chr9:71861684 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.356C>T (p.Pro119Leu) |
single nucleotide variant |
not provided [RCV001773800] |
Chr9:69220900 [GRCh38] Chr9:71835816 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.877C>T (p.Arg293Trp) |
single nucleotide variant |
not provided [RCV001752727] |
Chr9:69221421 [GRCh38] Chr9:71836337 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.849A>C (p.Arg283=) |
single nucleotide variant |
not provided [RCV001732994] |
Chr9:69221393 [GRCh38] Chr9:71836309 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2774C>T (p.Thr925Met) |
single nucleotide variant |
not provided [RCV001772458] |
Chr9:69248118 [GRCh38] Chr9:71863034 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.190A>G (p.Ile64Val) |
single nucleotide variant |
not provided [RCV001768508] |
Chr9:69216414 [GRCh38] Chr9:71831330 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3325G>A (p.Glu1109Lys) |
single nucleotide variant |
not provided [RCV001772964] |
Chr9:69252818 [GRCh38] Chr9:71867734 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1028A>G (p.Asn343Ser) |
single nucleotide variant |
not provided [RCV001767663] |
Chr9:69225379 [GRCh38] Chr9:71840295 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.607C>T (p.Arg203Trp) |
single nucleotide variant |
Inborn genetic diseases [RCV004686686]|not provided [RCV001767726] |
Chr9:69221151 [GRCh38] Chr9:71836067 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2115C>A (p.Asp705Glu) |
single nucleotide variant |
not provided [RCV001751950] |
Chr9:69237072 [GRCh38] Chr9:71851988 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2567-12A>G |
single nucleotide variant |
not provided [RCV001799964] |
Chr9:69246678 [GRCh38] Chr9:71861594 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.599G>T (p.Ser200Ile) |
single nucleotide variant |
not provided [RCV001773972] |
Chr9:69221143 [GRCh38] Chr9:71836059 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2230A>G (p.Met744Val) |
single nucleotide variant |
not provided [RCV001765236] |
Chr9:69237928 [GRCh38] Chr9:71852844 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3556C>G (p.Arg1186Gly) |
single nucleotide variant |
not provided [RCV001774127] |
Chr9:69254357 [GRCh38] Chr9:71869273 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3528C>T (p.Arg1176=) |
single nucleotide variant |
not provided [RCV001765293] |
Chr9:69254329 [GRCh38] Chr9:71869245 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.440A>G (p.Asp147Gly) |
single nucleotide variant |
not provided [RCV001752733] |
Chr9:69220984 [GRCh38] Chr9:71835900 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3152A>T (p.Lys1051Met) |
single nucleotide variant |
not provided [RCV001765705] |
Chr9:69251195 [GRCh38] Chr9:71866111 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1265A>G (p.Gln422Arg) |
single nucleotide variant |
not provided [RCV001771431] |
Chr9:69227819 [GRCh38] Chr9:71842735 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3325G>T (p.Glu1109Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV002272498]|not provided [RCV001785064] |
Chr9:69252818 [GRCh38] Chr9:71867734 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.853C>T (p.Arg285Cys) |
single nucleotide variant |
TJP2-related disorder [RCV003913365]|not provided [RCV001757061] |
Chr9:69221397 [GRCh38] Chr9:71836313 [GRCh37] Chr9:9q21.11 |
likely benign|conflicting interpretations of pathogenicity|uncertain significance |
NM_004817.4(TJP2):c.952+3A>G |
single nucleotide variant |
not provided [RCV001767696] |
Chr9:69221499 [GRCh38] Chr9:71836415 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1597A>T (p.Ile533Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV002544090]|not provided [RCV001761051] |
Chr9:69230158 [GRCh38] Chr9:71845074 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.213G>A (p.Pro71=) |
single nucleotide variant |
not provided [RCV001758423] |
Chr9:69216437 [GRCh38] Chr9:71831353 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2164G>A (p.Val722Ile) |
single nucleotide variant |
not provided [RCV001810344] |
Chr9:69237121 [GRCh38] Chr9:71852037 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.839G>T (p.Arg280Leu) |
single nucleotide variant |
not provided [RCV001806666] |
Chr9:69221383 [GRCh38] Chr9:71836299 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2750G>A (p.Arg917His) |
single nucleotide variant |
not provided [RCV002025927] |
Chr9:69248094 [GRCh38] Chr9:71863010 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2840C>T (p.Ser947Leu) |
single nucleotide variant |
not provided [RCV002008733] |
Chr9:69248184 [GRCh38] Chr9:71863100 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1501G>A (p.Glu501Lys) |
single nucleotide variant |
not provided [RCV001895768] |
Chr9:69229231 [GRCh38] Chr9:71844147 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.899G>A (p.Arg300Lys) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV004728862]|not provided [RCV001872306] |
Chr9:69221443 [GRCh38] Chr9:71836359 [GRCh37] Chr9:9q21.11 |
likely benign|uncertain significance |
NM_004817.4(TJP2):c.3064G>A (p.Val1022Ile) |
single nucleotide variant |
Inborn genetic diseases [RCV003247083]|not provided [RCV001870985] |
Chr9:69251107 [GRCh38] Chr9:71866023 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3376_3387del (p.Lys1126_Pro1129del) |
deletion |
not provided [RCV002006736] |
Chr9:69252869..69252880 [GRCh38] Chr9:71867785..71867796 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11(chr9:71806129-71893866)x1 |
copy number loss |
not provided [RCV001829240] |
Chr9:71806129..71893866 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2044C>T (p.Arg682Trp) |
single nucleotide variant |
not provided [RCV001843680] |
Chr9:69237001 [GRCh38] Chr9:71851917 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p24.3-q34.3(chr9:353349-141020389) |
copy number gain |
not specified [RCV002053823] |
Chr9:353349..141020389 [GRCh37] Chr9:9p24.3-q34.3 |
pathogenic |
GRCh37/hg19 9q21.11-33.2(chr9:71349994-122603410) |
copy number gain |
not specified [RCV002053853] |
Chr9:71349994..122603410 [GRCh37] Chr9:9q21.11-33.2 |
likely pathogenic |
NM_004817.4(TJP2):c.1567C>G (p.Leu523Val) |
single nucleotide variant |
not provided [RCV001911011] |
Chr9:69230128 [GRCh38] Chr9:71845044 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3415C>T (p.Pro1139Ser) |
single nucleotide variant |
not provided [RCV001891501] |
Chr9:69254216 [GRCh38] Chr9:71869132 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p24.3-q21.32(chr9:203861-84155399) |
copy number gain |
not specified [RCV002053820] |
Chr9:203861..84155399 [GRCh37] Chr9:9p24.3-q21.32 |
pathogenic |
NM_004817.4(TJP2):c.2852G>A (p.Arg951His) |
single nucleotide variant |
Inborn genetic diseases [RCV002579571]|TJP2-related disorder [RCV003402008]|not provided [RCV002002931] |
Chr9:69248196 [GRCh38] Chr9:71863112 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.413G>A (p.Arg138Gln) |
single nucleotide variant |
not provided [RCV001983687] |
Chr9:69220957 [GRCh38] Chr9:71835873 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2546del (p.Thr849fs) |
deletion |
not provided [RCV001938131] |
Chr9:69240127 [GRCh38] Chr9:71855043 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1141G>A (p.Val381Met) |
single nucleotide variant |
not provided [RCV001981076] |
Chr9:69226106 [GRCh38] Chr9:71841022 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1826T>C (p.Ile609Thr) |
single nucleotide variant |
not provided [RCV002050738] |
Chr9:69236073 [GRCh38] Chr9:71850989 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3463G>C (p.Gly1155Arg) |
single nucleotide variant |
not provided [RCV001978838] |
Chr9:69254264 [GRCh38] Chr9:71869180 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1967A>G (p.Lys656Arg) |
single nucleotide variant |
not provided [RCV001978449] |
Chr9:69236214 [GRCh38] Chr9:71851130 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NC_000009.11:g.(?_71849335)_(72006720_?)dup |
duplication |
not provided [RCV001918792] |
Chr9:71849335..72006720 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.788G>A (p.Arg263Gln) |
single nucleotide variant |
not provided [RCV001918999] |
Chr9:69221332 [GRCh38] Chr9:71836248 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2716G>A (p.Ala906Thr) |
single nucleotide variant |
not provided [RCV002049385] |
Chr9:69248060 [GRCh38] Chr9:71862976 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3061G>A (p.Ala1021Thr) |
single nucleotide variant |
not provided [RCV001921580] |
Chr9:69251104 [GRCh38] Chr9:71866020 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1585A>G (p.Asn529Asp) |
single nucleotide variant |
not provided [RCV002010738] |
Chr9:69230146 [GRCh38] Chr9:71845062 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2943A>C (p.Gln981His) |
single nucleotide variant |
Inborn genetic diseases [RCV004681261]|not provided [RCV002047160] |
Chr9:69249437 [GRCh38] Chr9:71864353 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.953-18_953-16delinsATCTCCTAGAGTATGTTTGTCTAGGAGACAAAGTATATACTAGAGTATA |
indel |
not provided [RCV001902090] |
Chr9:69225286..69225288 [GRCh38] Chr9:71840202..71840204 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.499C>T (p.Arg167Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV004681392]|not provided [RCV002010887] |
Chr9:69221043 [GRCh38] Chr9:71835959 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2921G>A (p.Arg974Lys) |
single nucleotide variant |
not provided [RCV001864876] |
Chr9:69249415 [GRCh38] Chr9:71864331 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.23G>C (p.Gly8Ala) |
single nucleotide variant |
not provided [RCV001977864] |
Chr9:69174395 [GRCh38] Chr9:71789311 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1056+11G>T |
single nucleotide variant |
not provided [RCV002124452] |
Chr9:69225418 [GRCh38] Chr9:71840334 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1056+15G>A |
single nucleotide variant |
not provided [RCV002191090] |
Chr9:69225422 [GRCh38] Chr9:71840338 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2567-4A>G |
single nucleotide variant |
not provided [RCV002188310] |
Chr9:69246686 [GRCh38] Chr9:71861602 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.288G>A (p.Val96=) |
single nucleotide variant |
not provided [RCV002092359] |
Chr9:69218305 [GRCh38] Chr9:71833221 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2275+24dup |
duplication |
not provided [RCV002127456] |
Chr9:69237988..69237989 [GRCh38] Chr9:71852904..71852905 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1780+11T>C |
single nucleotide variant |
not provided [RCV002193442] |
Chr9:69234558 [GRCh38] Chr9:71849474 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1781-16T>C |
single nucleotide variant |
not provided [RCV002132400] |
Chr9:69236012 [GRCh38] Chr9:71850928 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.2769A>G (p.Glu923=) |
single nucleotide variant |
not provided [RCV002096426] |
Chr9:69248113 [GRCh38] Chr9:71863029 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1320-19C>T |
single nucleotide variant |
not provided [RCV002131740] |
Chr9:69227962 [GRCh38] Chr9:71842878 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.428T>C (p.Met143Thr) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV002272612]|not provided [RCV003164395] |
Chr9:69220972 [GRCh38] Chr9:71835888 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1521-7A>G |
single nucleotide variant |
not provided [RCV002099511] |
Chr9:69230075 [GRCh38] Chr9:71844991 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1908A>C (p.Thr636=) |
single nucleotide variant |
not provided [RCV002177005] |
Chr9:69236155 [GRCh38] Chr9:71851071 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3012A>G (p.Glu1004=) |
single nucleotide variant |
not provided [RCV002120619] |
Chr9:69251055 [GRCh38] Chr9:71865971 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2984C>T (p.Pro995Leu) |
single nucleotide variant |
not provided [RCV003114162] |
Chr9:69249478 [GRCh38] Chr9:71864394 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3238G>A (p.Gly1080Ser) |
single nucleotide variant |
TJP2-related disorder [RCV003427689]|not provided [RCV003122017] |
Chr9:69251281 [GRCh38] Chr9:71866197 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.658A>C (p.Ser220Arg) |
single nucleotide variant |
not provided [RCV003120043] |
Chr9:69221202 [GRCh38] Chr9:71836118 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1004C>T (p.Thr335Met) |
single nucleotide variant |
not provided [RCV002244450] |
Chr9:69225355 [GRCh38] Chr9:71840271 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1367C>A (p.Pro456His) |
single nucleotide variant |
not provided [RCV003149282] |
Chr9:69228028 [GRCh38] Chr9:71842944 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.838C>T (p.Arg280Trp) |
single nucleotide variant |
not provided [RCV003231774] |
Chr9:69221382 [GRCh38] Chr9:71836298 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.964C>T (p.Arg322Trp) |
single nucleotide variant |
not provided [RCV002261869] |
Chr9:69225315 [GRCh38] Chr9:71840231 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9p22.1-q33.1(chr9:19356861-119513311) |
copy number loss |
Distal tetrasomy 15q [RCV002280776] |
Chr9:19356861..119513311 [GRCh37] Chr9:9p22.1-q33.1 |
uncertain significance |
NM_004817.4(TJP2):c.3115G>A (p.Val1039Ile) |
single nucleotide variant |
not provided [RCV002265131] |
Chr9:69251158 [GRCh38] Chr9:71866074 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2020G>T (p.Ala674Ser) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV002279862] |
Chr9:69236977 [GRCh38] Chr9:71851893 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3182G>T (p.Gly1061Val) |
single nucleotide variant |
not provided [RCV002281268] |
Chr9:69251225 [GRCh38] Chr9:71866141 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2323C>T (p.Arg775Trp) |
single nucleotide variant |
not provided [RCV002292049] |
Chr9:69238757 [GRCh38] Chr9:71853673 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2071C>T (p.Gln691Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV002284005] |
Chr9:69237028 [GRCh38] Chr9:71851944 [GRCh37] Chr9:9q21.11 |
pathogenic |
GRCh37/hg19 9p24.3-q34.11(chr9:203861-131603223)x3 |
copy number gain |
See cases [RCV002292402] |
Chr9:203861..131603223 [GRCh37] Chr9:9p24.3-q34.11 |
pathogenic |
NM_004817.4(TJP2):c.49G>C (p.Gly17Arg) |
single nucleotide variant |
not provided [RCV002265132] |
Chr9:69174421 [GRCh38] Chr9:71789337 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1820T>G (p.Phe607Cys) |
single nucleotide variant |
not provided [RCV002293663] |
Chr9:69236067 [GRCh38] Chr9:71850983 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1673T>C (p.Val558Ala) |
single nucleotide variant |
Inborn genetic diseases [RCV003264929] |
Chr9:69234440 [GRCh38] Chr9:71849356 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.766del (p.Ala256fs) |
deletion |
not provided [RCV002858390] |
Chr9:69221308 [GRCh38] Chr9:71836224 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2667+3A>G |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV002470294] |
Chr9:69246793 [GRCh38] Chr9:71861709 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2624T>C (p.Ile875Thr) |
single nucleotide variant |
Autosomal dominant nonsyndromic hearing loss 51 [RCV004585138] |
Chr9:69246747 [GRCh38] Chr9:71861663 [GRCh37] Chr9:9q21.11 |
pathogenic |
GRCh37/hg19 9q21.11(chr9:71496157-71893866)x1 |
copy number loss |
not provided [RCV002473605] |
Chr9:71496157..71893866 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3527G>A (p.Arg1176His) |
single nucleotide variant |
Inborn genetic diseases [RCV003097869]|not provided [RCV002300787] |
Chr9:69254328 [GRCh38] Chr9:71869244 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.782A>G (p.Tyr261Cys) |
single nucleotide variant |
not provided [RCV002301059] |
Chr9:69221326 [GRCh38] Chr9:71836242 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2845A>G (p.Ile949Val) |
single nucleotide variant |
not provided [RCV002462540] |
Chr9:69248189 [GRCh38] Chr9:71863105 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2866G>C (p.Val956Leu) |
single nucleotide variant |
not provided [RCV002508661] |
Chr9:69248210 [GRCh38] Chr9:71863126 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3290T>G (p.Met1097Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV002865830] |
Chr9:69251333 [GRCh38] Chr9:71866249 [GRCh37] Chr9:9q21.11 |
uncertain significance |
GRCh37/hg19 9q21.11-21.13(chr9:70966262-76901382)x3 |
copy number gain |
not provided [RCV002475692] |
Chr9:70966262..76901382 [GRCh37] Chr9:9q21.11-21.13 |
uncertain significance |
NM_004817.4(TJP2):c.490C>T (p.His164Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV003250509]|not provided [RCV002511215] |
Chr9:69221034 [GRCh38] Chr9:71835950 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.147C>T (p.Ser49=) |
single nucleotide variant |
not provided [RCV002995393] |
Chr9:69216371 [GRCh38] Chr9:71831287 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1443G>A (p.Glu481=) |
single nucleotide variant |
not provided [RCV003012206] |
Chr9:69228104 [GRCh38] Chr9:71843020 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.454C>T (p.Arg152Trp) |
single nucleotide variant |
Inborn genetic diseases [RCV003250581]|not provided [RCV002775188] |
Chr9:69220998 [GRCh38] Chr9:71835914 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1880del (p.Arg627fs) |
deletion |
not provided [RCV002861819] |
Chr9:69236127 [GRCh38] Chr9:71851043 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2217A>G (p.Ile739Met) |
single nucleotide variant |
Inborn genetic diseases [RCV002880050] |
Chr9:69237915 [GRCh38] Chr9:71852831 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2065C>T (p.Arg689Cys) |
single nucleotide variant |
not provided [RCV002975294] |
Chr9:69237022 [GRCh38] Chr9:71851938 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.763C>T (p.Arg255Trp) |
single nucleotide variant |
Inborn genetic diseases [RCV002727761] |
Chr9:69221307 [GRCh38] Chr9:71836223 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3296A>C (p.Glu1099Ala) |
single nucleotide variant |
not provided [RCV002750862] |
Chr9:69251339 [GRCh38] Chr9:71866255 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.952+1_952+732del |
deletion |
not provided [RCV003037783] |
Chr9:69221495..69222226 [GRCh38] Chr9:71836411..71837142 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.2869C>T (p.Gln957Ter) |
single nucleotide variant |
not provided [RCV002871377] |
Chr9:69248213 [GRCh38] Chr9:71863129 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.220C>T (p.Pro74Ser) |
single nucleotide variant |
not provided [RCV003003262] |
Chr9:69216444 [GRCh38] Chr9:71831360 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1672-17T>G |
single nucleotide variant |
not provided [RCV003055271] |
Chr9:69234422 [GRCh38] Chr9:71849338 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1022A>G (p.Asp341Gly) |
single nucleotide variant |
not provided [RCV003019788] |
Chr9:69225373 [GRCh38] Chr9:71840289 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2345T>C (p.Ile782Thr) |
single nucleotide variant |
not provided [RCV002885527] |
Chr9:69238779 [GRCh38] Chr9:71853695 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.551C>T (p.Ala184Val) |
single nucleotide variant |
Inborn genetic diseases [RCV002868356] |
Chr9:69221095 [GRCh38] Chr9:71836011 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.757T>C (p.Tyr253His) |
single nucleotide variant |
Inborn genetic diseases [RCV002782845] |
Chr9:69221301 [GRCh38] Chr9:71836217 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.566G>A (p.Arg189Gln) |
single nucleotide variant |
not provided [RCV002658800] |
Chr9:69221110 [GRCh38] Chr9:71836026 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1777G>T (p.Asp593Tyr) |
single nucleotide variant |
not provided [RCV002705532] |
Chr9:69234544 [GRCh38] Chr9:71849460 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1735C>T (p.Pro579Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV002694514] |
Chr9:69234502 [GRCh38] Chr9:71849418 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3499C>T (p.Arg1167Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV002844954] |
Chr9:69254300 [GRCh38] Chr9:71869216 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1991+12C>T |
single nucleotide variant |
not provided [RCV002760134] |
Chr9:69236250 [GRCh38] Chr9:71851166 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1949T>G (p.Ile650Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV002823226] |
Chr9:69236196 [GRCh38] Chr9:71851112 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.659G>A (p.Ser220Asn) |
single nucleotide variant |
not provided [RCV002975692] |
Chr9:69221203 [GRCh38] Chr9:71836119 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.258C>G (p.Val86=) |
single nucleotide variant |
not provided [RCV002700619] |
Chr9:69218275 [GRCh38] Chr9:71833191 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.194T>C (p.Val65Ala) |
single nucleotide variant |
not provided [RCV002933449] |
Chr9:69216418 [GRCh38] Chr9:71831334 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.432C>G (p.Asp144Glu) |
single nucleotide variant |
not provided [RCV002508506] |
Chr9:69220976 [GRCh38] Chr9:71835892 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2549G>T (p.Cys850Phe) |
single nucleotide variant |
Inborn genetic diseases [RCV002804428] |
Chr9:69240130 [GRCh38] Chr9:71855046 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+15G>T |
single nucleotide variant |
TJP2-related disorder [RCV003916540]|not provided [RCV002790983] |
Chr9:69248239 [GRCh38] Chr9:71863155 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2584T>C (p.Ser862Pro) |
single nucleotide variant |
not provided [RCV002645774] |
Chr9:69246707 [GRCh38] Chr9:71861623 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1180T>A (p.Ser394Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002919725] |
Chr9:69226145 [GRCh38] Chr9:71841061 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2668-15C>T |
single nucleotide variant |
not provided [RCV003043211] |
Chr9:69247997 [GRCh38] Chr9:71862913 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.941G>C (p.Arg314Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002854040] |
Chr9:69221485 [GRCh38] Chr9:71836401 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.720C>G (p.Ser240Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV002803720] |
Chr9:69221264 [GRCh38] Chr9:71836180 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880+3GAGGC[3] |
microsatellite |
not provided [RCV002825743] |
Chr9:69248226..69248227 [GRCh38] Chr9:71863142..71863143 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2144A>C (p.Lys715Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV002827014] |
Chr9:69237101 [GRCh38] Chr9:71852017 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2181T>C (p.Ala727=) |
single nucleotide variant |
not provided [RCV003022662] |
Chr9:69237879 [GRCh38] Chr9:71852795 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.823C>T (p.His275Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV002697325] |
Chr9:69221367 [GRCh38] Chr9:71836283 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.377C>T (p.Ala126Val) |
single nucleotide variant |
Inborn genetic diseases [RCV002802504] |
Chr9:69220921 [GRCh38] Chr9:71835837 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.494G>C (p.Gly165Ala) |
single nucleotide variant |
Inborn genetic diseases [RCV004064354]|not provided [RCV002573820] |
Chr9:69221038 [GRCh38] Chr9:71835954 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.578G>C (p.Arg193Pro) |
single nucleotide variant |
Inborn genetic diseases [RCV002929597] |
Chr9:69221122 [GRCh38] Chr9:71836038 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.894G>C (p.Glu298Asp) |
single nucleotide variant |
not provided [RCV002958765] |
Chr9:69221438 [GRCh38] Chr9:71836354 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2653G>A (p.Val885Ile) |
single nucleotide variant |
not provided [RCV002917164] |
Chr9:69246776 [GRCh38] Chr9:71861692 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.673C>A (p.Leu225Met) |
single nucleotide variant |
not provided [RCV002627048] |
Chr9:69221217 [GRCh38] Chr9:71836133 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2991+18_2991+31del |
deletion |
not provided [RCV002574008] |
Chr9:69249503..69249516 [GRCh38] Chr9:71864419..71864432 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.619C>T (p.Gln207Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492776]|not provided [RCV002711234] |
Chr9:69221163 [GRCh38] Chr9:71836079 [GRCh37] Chr9:9q21.11 |
pathogenic|likely pathogenic |
NM_004817.4(TJP2):c.342+16G>A |
single nucleotide variant |
not provided [RCV002711480] |
Chr9:69218375 [GRCh38] Chr9:71833291 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.81G>A (p.Leu27=) |
single nucleotide variant |
not provided [RCV003022613] |
Chr9:69212568 [GRCh38] Chr9:71827484 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1139T>C (p.Val380Ala) |
single nucleotide variant |
not provided [RCV002598176] |
Chr9:69226104 [GRCh38] Chr9:71841020 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.520A>G (p.Ser174Gly) |
single nucleotide variant |
not provided [RCV002834732] |
Chr9:69221064 [GRCh38] Chr9:71835980 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2979A>T (p.Pro993=) |
single nucleotide variant |
not provided [RCV002602615] |
Chr9:69249473 [GRCh38] Chr9:71864389 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2992-5C>T |
single nucleotide variant |
not provided [RCV002602378] |
Chr9:69251030 [GRCh38] Chr9:71865946 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.409G>A (p.Asp137Asn) |
single nucleotide variant |
Inborn genetic diseases [RCV002809135] |
Chr9:69220953 [GRCh38] Chr9:71835869 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3551G>A (p.Arg1184Gln) |
single nucleotide variant |
Inborn genetic diseases [RCV004676161]|not provided [RCV002628063] |
Chr9:69254352 [GRCh38] Chr9:71869268 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.945G>T (p.Ala315=) |
single nucleotide variant |
not provided [RCV002962311] |
Chr9:69221489 [GRCh38] Chr9:71836405 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2991+17_2991+30del |
deletion |
not provided [RCV002629214] |
Chr9:69249495..69249508 [GRCh38] Chr9:71864411..71864424 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1211-16T>G |
single nucleotide variant |
not provided [RCV003026477] |
Chr9:69227749 [GRCh38] Chr9:71842665 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.945G>A (p.Ala315=) |
single nucleotide variant |
not provided [RCV002715254] |
Chr9:69221489 [GRCh38] Chr9:71836405 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1320-18G>A |
single nucleotide variant |
not provided [RCV002581297] |
Chr9:69227963 [GRCh38] Chr9:71842879 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3529G>A (p.Gly1177Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV002832356]|not provided [RCV004725598] |
Chr9:69254330 [GRCh38] Chr9:71869246 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2208C>T (p.Phe736=) |
single nucleotide variant |
not provided [RCV002937956] |
Chr9:69237906 [GRCh38] Chr9:71852822 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1090A>G (p.Thr364Ala) |
single nucleotide variant |
not provided [RCV003045974] |
Chr9:69226055 [GRCh38] Chr9:71840971 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.939C>T (p.Ser313=) |
single nucleotide variant |
not provided [RCV003031520] |
Chr9:69221483 [GRCh38] Chr9:71836399 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1211-18T>A |
single nucleotide variant |
not provided [RCV003045375] |
Chr9:69227747 [GRCh38] Chr9:71842663 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2855C>G (p.Ser952Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV002934516] |
Chr9:69248199 [GRCh38] Chr9:71863115 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1992-16del |
deletion |
not provided [RCV002601085] |
Chr9:69236931 [GRCh38] Chr9:71851847 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1628C>T (p.Ser543Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV002657362]|TJP2-related disorder [RCV003396874] |
Chr9:69230189 [GRCh38] Chr9:71845105 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3408-17C>T |
single nucleotide variant |
not provided [RCV002586970] |
Chr9:69254192 [GRCh38] Chr9:71869108 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.205G>A (p.Val69Met) |
single nucleotide variant |
not provided [RCV002603514] |
Chr9:69216429 [GRCh38] Chr9:71831345 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3393G>A (p.Thr1131=) |
single nucleotide variant |
not provided [RCV002588724] |
Chr9:69252886 [GRCh38] Chr9:71867802 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.629C>T (p.Ala210Val) |
single nucleotide variant |
not provided [RCV002589629] |
Chr9:69221173 [GRCh38] Chr9:71836089 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1780+6C>A |
single nucleotide variant |
not provided [RCV002604113] |
Chr9:69234553 [GRCh38] Chr9:71849469 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2874C>T (p.His958=) |
single nucleotide variant |
not provided [RCV002612658] |
Chr9:69248218 [GRCh38] Chr9:71863134 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.79C>G (p.Leu27Val) |
single nucleotide variant |
Inborn genetic diseases [RCV003189620]|not provided [RCV004765765] |
Chr9:69212566 [GRCh38] Chr9:71827482 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2884A>C (p.Ile962Leu) |
single nucleotide variant |
not provided [RCV003159401] |
Chr9:69249378 [GRCh38] Chr9:71864294 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.764G>A (p.Arg255Gln) |
single nucleotide variant |
TJP2-related disorder [RCV004750878]|not provided [RCV003224027] |
Chr9:69221308 [GRCh38] Chr9:71836224 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1521-2_1521-1insTAA |
insertion |
not provided [RCV003141016] |
Chr9:69230079..69230080 [GRCh38] Chr9:71844995..71844996 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1319G>C (p.Ser440Thr) |
single nucleotide variant |
not provided [RCV003141017] |
Chr9:69227873 [GRCh38] Chr9:71842789 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.579_590del (p.Asp194_Arg197del) |
deletion |
not provided [RCV003141018] |
Chr9:69221118..69221129 [GRCh38] Chr9:71836034..71836045 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.355C>A (p.Pro119Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003213009] |
Chr9:69220899 [GRCh38] Chr9:71835815 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2572A>G (p.Ile858Val) |
single nucleotide variant |
not provided [RCV003225585] |
Chr9:69246695 [GRCh38] Chr9:71861611 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.679C>T (p.His227Tyr) |
single nucleotide variant |
not provided [RCV003319874] |
Chr9:69221223 [GRCh38] Chr9:71836139 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2083G>T (p.Val695Leu) |
single nucleotide variant |
not provided [RCV003318814] |
Chr9:69237040 [GRCh38] Chr9:71851956 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3327A>T (p.Glu1109Asp) |
single nucleotide variant |
Inborn genetic diseases [RCV003308886] |
Chr9:69252820 [GRCh38] Chr9:71867736 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3215A>G (p.Asp1072Gly) |
single nucleotide variant |
not provided [RCV003318858] |
Chr9:69251258 [GRCh38] Chr9:71866174 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2491A>G (p.Thr831Ala) |
single nucleotide variant |
not provided [RCV004592002] |
Chr9:69240072 [GRCh38] Chr9:71854988 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2415G>T (p.Gln805His) |
single nucleotide variant |
not provided [RCV003329594] |
Chr9:69239996 [GRCh38] Chr9:71854912 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2036C>G (p.Ala679Gly) |
single nucleotide variant |
not provided [RCV003329979] |
Chr9:69236993 [GRCh38] Chr9:71851909 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2051A>G (p.Asp684Gly) |
single nucleotide variant |
Inborn genetic diseases [RCV003340330] |
Chr9:69237008 [GRCh38] Chr9:71851924 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3415C>A (p.Pro1139Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003360211] |
Chr9:69254216 [GRCh38] Chr9:71869132 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.616G>T (p.Asp206Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV003371994] |
Chr9:69221160 [GRCh38] Chr9:71836076 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1393A>G (p.Ile465Val) |
single nucleotide variant |
Inborn genetic diseases [RCV003352470] |
Chr9:69228054 [GRCh38] Chr9:71842970 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2725G>A (p.Ala909Thr) |
single nucleotide variant |
Inborn genetic diseases [RCV003367000] |
Chr9:69248069 [GRCh38] Chr9:71862985 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.643C>T (p.Arg215Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV003364689] |
Chr9:69221187 [GRCh38] Chr9:71836103 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.559C>G (p.Arg187Gly) |
single nucleotide variant |
not provided [RCV003332849] |
Chr9:69221103 [GRCh38] Chr9:71836019 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.568G>T (p.Asp190Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV003372277] |
Chr9:69221112 [GRCh38] Chr9:71836028 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1360G>A (p.Ala454Thr) |
single nucleotide variant |
not provided [RCV003481912] |
Chr9:69228021 [GRCh38] Chr9:71842937 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1624A>T (p.Thr542Ser) |
single nucleotide variant |
not provided [RCV003481914] |
Chr9:69230185 [GRCh38] Chr9:71845101 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1320-1G>A |
single nucleotide variant |
not provided [RCV003489483] |
Chr9:69227980 [GRCh38] Chr9:71842896 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.2188A>T (p.Lys730Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003388678] |
Chr9:69237886 [GRCh38] Chr9:71852802 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.3404C>T (p.Thr1135Met) |
single nucleotide variant |
not provided [RCV003481915] |
Chr9:69252897 [GRCh38] Chr9:71867813 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2395G>A (p.Asp799Asn) |
single nucleotide variant |
not provided [RCV003442603] |
Chr9:69239976 [GRCh38] Chr9:71854892 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1499C>T (p.Pro500Leu) |
single nucleotide variant |
not provided [RCV003481913] |
Chr9:69229229 [GRCh38] Chr9:71844145 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3277A>G (p.Arg1093Gly) |
single nucleotide variant |
not provided [RCV003435813] |
Chr9:69251320 [GRCh38] Chr9:71866236 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.716G>A (p.Arg239His) |
single nucleotide variant |
not provided [RCV003425679] |
Chr9:69221260 [GRCh38] Chr9:71836176 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2434T>G (p.Phe812Val) |
single nucleotide variant |
not provided [RCV003443329] |
Chr9:69240015 [GRCh38] Chr9:71854931 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2355+14T>A |
single nucleotide variant |
not provided [RCV003882536] |
Chr9:69238803 [GRCh38] Chr9:71853719 [GRCh37] Chr9:9q21.11 |
benign |
NM_004817.4(TJP2):c.1855A>G (p.Thr619Ala) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492887] |
Chr9:69236102 [GRCh38] Chr9:71851018 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.953-1G>A |
single nucleotide variant |
not provided [RCV003662880] |
Chr9:69225303 [GRCh38] Chr9:71840219 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.2885del (p.Ile962fs) |
deletion |
not provided [RCV003689401] |
Chr9:69249379 [GRCh38] Chr9:71864295 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.3243A>T (p.Lys1081Asn) |
single nucleotide variant |
not provided [RCV003695856] |
Chr9:69251286 [GRCh38] Chr9:71866202 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1517_1520+8del |
deletion |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492888] |
Chr9:69229244..69229255 [GRCh38] Chr9:71844160..71844171 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.3549C>T (p.Ala1183=) |
single nucleotide variant |
TJP2-related disorder [RCV003921361]|not provided [RCV003829158] |
Chr9:69254350 [GRCh38] Chr9:71869266 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1520+21_1520+22del |
deletion |
not provided [RCV003661891] |
Chr9:69229270..69229271 [GRCh38] Chr9:71844186..71844187 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1765C>T (p.Gln589Ter) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003492889] |
Chr9:69234532 [GRCh38] Chr9:71849448 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1338G>A (p.Pro446=) |
single nucleotide variant |
not provided [RCV003832051] |
Chr9:69227999 [GRCh38] Chr9:71842915 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1794C>T (p.Ile598=) |
single nucleotide variant |
not provided [RCV003851053] |
Chr9:69236041 [GRCh38] Chr9:71850957 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3471T>C (p.Tyr1157=) |
single nucleotide variant |
not provided [RCV003740354] |
Chr9:69254272 [GRCh38] Chr9:71869188 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2016A>G (p.Gln672=) |
single nucleotide variant |
not provided [RCV003835152] |
Chr9:69236973 [GRCh38] Chr9:71851889 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.723C>T (p.Arg241=) |
single nucleotide variant |
not provided [RCV003665640] |
Chr9:69221267 [GRCh38] Chr9:71836183 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3141G>T (p.Arg1047=) |
single nucleotide variant |
TJP2-related disorder [RCV003893466]|not provided [RCV003835969] |
Chr9:69251184 [GRCh38] Chr9:71866100 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1992-15G>A |
single nucleotide variant |
not provided [RCV003852146] |
Chr9:69236934 [GRCh38] Chr9:71851850 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3483C>A (p.Ala1161=) |
single nucleotide variant |
TJP2-related disorder [RCV003909177]|not provided [RCV003837694] |
Chr9:69254284 [GRCh38] Chr9:71869200 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1520+12C>T |
single nucleotide variant |
not provided [RCV003817322] |
Chr9:69229262 [GRCh38] Chr9:71844178 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1520+19C>G |
single nucleotide variant |
not provided [RCV003814256] |
Chr9:69229269 [GRCh38] Chr9:71844185 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2706C>G (p.Ser902=) |
single nucleotide variant |
not provided [RCV003834946] |
Chr9:69248050 [GRCh38] Chr9:71862966 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.4_11dup (p.Gly5fs) |
duplication |
not provided [RCV003724641] |
Chr9:69174374..69174375 [GRCh38] Chr9:71789290..71789291 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.1453+16C>T |
single nucleotide variant |
not provided [RCV003838128] |
Chr9:69228130 [GRCh38] Chr9:71843046 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1453+17A>C |
single nucleotide variant |
not provided [RCV003816461] |
Chr9:69228131 [GRCh38] Chr9:71843047 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1825A>G (p.Ile609Val) |
single nucleotide variant |
TJP2-related disorder [RCV004750934]|not provided [RCV003819629] |
Chr9:69236072 [GRCh38] Chr9:71850988 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2276-20T>G |
single nucleotide variant |
not provided [RCV003675138] |
Chr9:69238690 [GRCh38] Chr9:71853606 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2668-12A>G |
single nucleotide variant |
not provided [RCV003848114] |
Chr9:69248000 [GRCh38] Chr9:71862916 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1929C>T (p.Gly643=) |
single nucleotide variant |
TJP2-related disorder [RCV004750920]|not provided [RCV003710145] |
Chr9:69236176 [GRCh38] Chr9:71851092 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2451C>T (p.Ser817=) |
single nucleotide variant |
not provided [RCV003711055] |
Chr9:69240032 [GRCh38] Chr9:71854948 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1781-19C>T |
single nucleotide variant |
not provided [RCV003820724] |
Chr9:69236009 [GRCh38] Chr9:71850925 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.953-9G>T |
single nucleotide variant |
not provided [RCV003853155] |
Chr9:69225295 [GRCh38] Chr9:71840211 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.637C>T (p.Arg213Ter) |
single nucleotide variant |
not provided [RCV003845506] |
Chr9:69221181 [GRCh38] Chr9:71836097 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2881-2A>G |
single nucleotide variant |
not provided [RCV003710624] |
Chr9:69249373 [GRCh38] Chr9:71864289 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.1001G>A (p.Arg334Gln) |
single nucleotide variant |
Inborn genetic diseases [RCV004676322]|not provided [RCV003871988] |
Chr9:69225352 [GRCh38] Chr9:71840268 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.239+12C>G |
single nucleotide variant |
not provided [RCV003707471] |
Chr9:69216475 [GRCh38] Chr9:71831391 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2363A>T (p.His788Leu) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV003986035] |
Chr9:69239944 [GRCh38] Chr9:71854860 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.3408-12T>A |
single nucleotide variant |
not provided [RCV003542858] |
Chr9:69254197 [GRCh38] Chr9:71869113 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.547C>A (p.Arg183=) |
single nucleotide variant |
not provided [RCV003722047] |
Chr9:69221091 [GRCh38] Chr9:71836007 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.648C>T (p.Ser216=) |
single nucleotide variant |
not provided [RCV003554784] |
Chr9:69221192 [GRCh38] Chr9:71836108 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1056+9A>C |
single nucleotide variant |
not provided [RCV003708978] |
Chr9:69225416 [GRCh38] Chr9:71840332 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1362G>A (p.Ala454=) |
single nucleotide variant |
not provided [RCV003819172] |
Chr9:69228023 [GRCh38] Chr9:71842939 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2136C>G (p.Val712=) |
single nucleotide variant |
TJP2-related disorder [RCV003947298] |
Chr9:69237093 [GRCh38] Chr9:71852009 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.60+7G>C |
single nucleotide variant |
TJP2-related disorder [RCV003961522] |
Chr9:69174439 [GRCh38] Chr9:71789355 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.801G>A (p.Pro267=) |
single nucleotide variant |
TJP2-related disorder [RCV003902285] |
Chr9:69221345 [GRCh38] Chr9:71836261 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.357C>T (p.Pro119=) |
single nucleotide variant |
TJP2-related disorder [RCV003902088] |
Chr9:69220901 [GRCh38] Chr9:71835817 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.699G>A (p.Arg233=) |
single nucleotide variant |
TJP2-related disorder [RCV003921533] |
Chr9:69221243 [GRCh38] Chr9:71836159 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2802C>A (p.Asp934Glu) |
single nucleotide variant |
TJP2-related disorder [RCV003983354] |
Chr9:69248146 [GRCh38] Chr9:71863062 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.55C>T (p.Leu19Phe) |
single nucleotide variant |
TJP2-related disorder [RCV003899509] |
Chr9:69174427 [GRCh38] Chr9:71789343 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.639A>C (p.Arg213=) |
single nucleotide variant |
TJP2-related disorder [RCV003903885] |
Chr9:69221183 [GRCh38] Chr9:71836099 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.819C>T (p.Ala273=) |
single nucleotide variant |
TJP2-related disorder [RCV003937291] |
Chr9:69221363 [GRCh38] Chr9:71836279 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.825C>T (p.His275=) |
single nucleotide variant |
TJP2-related disorder [RCV003983697] |
Chr9:69221369 [GRCh38] Chr9:71836285 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.277A>G (p.Met93Val) |
single nucleotide variant |
TJP2-related disorder [RCV003897263] |
Chr9:69218294 [GRCh38] Chr9:71833210 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.559_565del (p.Arg187fs) |
deletion |
TJP2-related disorder [RCV003904331] |
Chr9:69221098..69221104 [GRCh38] Chr9:71836014..71836020 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.3235C>T (p.Leu1079=) |
single nucleotide variant |
TJP2-related disorder [RCV003959677] |
Chr9:69251278 [GRCh38] Chr9:71866194 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3528C>G (p.Arg1176=) |
single nucleotide variant |
TJP2-related disorder [RCV003981708] |
Chr9:69254329 [GRCh38] Chr9:71869245 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3423G>A (p.Glu1141=) |
single nucleotide variant |
TJP2-related disorder [RCV003982717] |
Chr9:69254224 [GRCh38] Chr9:71869140 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.721C>T (p.Arg241Cys) |
single nucleotide variant |
TJP2-related disorder [RCV003976909] |
Chr9:69221265 [GRCh38] Chr9:71836181 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.476G>T (p.Ser159Ile) |
single nucleotide variant |
TJP2-related disorder [RCV003907126] |
Chr9:69221020 [GRCh38] Chr9:71835936 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1710T>C (p.Asp570=) |
single nucleotide variant |
TJP2-related disorder [RCV003894751] |
Chr9:69234477 [GRCh38] Chr9:71849393 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2823C>T (p.Ala941=) |
single nucleotide variant |
TJP2-related disorder [RCV003897190] |
Chr9:69248167 [GRCh38] Chr9:71863083 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.1525A>G (p.Asn509Asp) |
single nucleotide variant |
Inborn genetic diseases [RCV004469989] |
Chr9:69230086 [GRCh38] Chr9:71845002 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2789G>A (p.Gly930Asp) |
single nucleotide variant |
Inborn genetic diseases [RCV004469993] |
Chr9:69248133 [GRCh38] Chr9:71863049 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.641A>C (p.Asp214Ala) |
single nucleotide variant |
Inborn genetic diseases [RCV004469996] |
Chr9:69221185 [GRCh38] Chr9:71836101 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.854G>A (p.Arg285His) |
single nucleotide variant |
Inborn genetic diseases [RCV004469998] |
Chr9:69221398 [GRCh38] Chr9:71836314 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2267A>G (p.Gln756Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV004469990] |
Chr9:69237965 [GRCh38] Chr9:71852881 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.488G>A (p.Ser163Asn) |
single nucleotide variant |
Inborn genetic diseases [RCV004469994]|not provided [RCV004767552] |
Chr9:69221032 [GRCh38] Chr9:71835948 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2668A>G (p.Met890Val) |
single nucleotide variant |
Inborn genetic diseases [RCV004469991] |
Chr9:69248012 [GRCh38] Chr9:71862928 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1780+2T>G |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV004585202] |
Chr9:69234549 [GRCh38] Chr9:71849465 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.2698C>A (p.Arg900Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV004469992]|not provided [RCV004588541] |
Chr9:69248042 [GRCh38] Chr9:71862958 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.515A>G (p.Glu172Gly) |
single nucleotide variant |
Inborn genetic diseases [RCV004469995] |
Chr9:69221059 [GRCh38] Chr9:71835975 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.676G>T (p.Asp226Tyr) |
single nucleotide variant |
Inborn genetic diseases [RCV004469997] |
Chr9:69221220 [GRCh38] Chr9:71836136 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.923T>C (p.Val308Ala) |
single nucleotide variant |
Inborn genetic diseases [RCV004469999] |
Chr9:69221467 [GRCh38] Chr9:71836383 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NC_000009.11:g.(?_71627953)_(72006720_?)del |
deletion |
not provided [RCV004582096] |
Chr9:71627953..72006720 [GRCh37] Chr9:9q21.11 |
pathogenic |
NC_000009.11:g.(?_71831235)_(71831399_?)del |
deletion |
not provided [RCV004582098] |
Chr9:71831235..71831399 [GRCh37] Chr9:9q21.11 |
pathogenic |
NM_004817.4(TJP2):c.2480G>A (p.Arg827Lys) |
single nucleotide variant |
Inborn genetic diseases [RCV004677011] |
Chr9:69240061 [GRCh38] Chr9:71854977 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3433G>C (p.Ala1145Pro) |
single nucleotide variant |
Inborn genetic diseases [RCV004677012] |
Chr9:69254234 [GRCh38] Chr9:71869150 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1565G>T (p.Gly522Val) |
single nucleotide variant |
Inborn genetic diseases [RCV004677013] |
Chr9:69230126 [GRCh38] Chr9:71845042 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.493G>C (p.Gly165Arg) |
single nucleotide variant |
Inborn genetic diseases [RCV004677014] |
Chr9:69221037 [GRCh38] Chr9:71835953 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2418G>C (p.Trp806Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV004677015] |
Chr9:69239999 [GRCh38] Chr9:71854915 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.709C>T (p.Arg237Cys) |
single nucleotide variant |
Inborn genetic diseases [RCV004677016] |
Chr9:69221253 [GRCh38] Chr9:71836169 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.259A>G (p.Met87Val) |
single nucleotide variant |
Inborn genetic diseases [RCV004677017] |
Chr9:69218276 [GRCh38] Chr9:71833192 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1061A>G (p.Asn354Ser) |
single nucleotide variant |
Inborn genetic diseases [RCV004677018] |
Chr9:69226026 [GRCh38] Chr9:71840942 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2677A>T (p.Met893Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV004677010] |
Chr9:69248021 [GRCh38] Chr9:71862937 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.395C>T (p.Pro132Leu) |
single nucleotide variant |
Inborn genetic diseases [RCV004686825] |
Chr9:69220939 [GRCh38] Chr9:71835855 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1552G>C (p.Gly518Arg) |
single nucleotide variant |
not provided [RCV004725944] |
Chr9:69230113 [GRCh38] Chr9:71845029 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.910G>A (p.Gly304Arg) |
single nucleotide variant |
not provided [RCV004723925] |
Chr9:69221454 [GRCh38] Chr9:71836370 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1886A>T (p.Glu629Val) |
single nucleotide variant |
not provided [RCV004772016] |
Chr9:69236133 [GRCh38] Chr9:71851049 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1878C>G (p.Thr626=) |
single nucleotide variant |
TJP2-related disorder [RCV004730357] |
Chr9:69236125 [GRCh38] Chr9:71851041 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.551_568del (p.Ala184_Arg189del) |
deletion |
not provided [RCV004729383] |
Chr9:69221088..69221105 [GRCh38] Chr9:71836004..71836021 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2880G>A (p.Glu960=) |
single nucleotide variant |
not provided [RCV004722332] |
Chr9:69248224 [GRCh38] Chr9:71863140 [GRCh37] Chr9:9q21.11 |
likely pathogenic |
NM_004817.4(TJP2):c.519C>G (p.Asp173Glu) |
single nucleotide variant |
TJP2-related disorder [RCV004731350] |
Chr9:69221063 [GRCh38] Chr9:71835979 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1453G>A (p.Ala485Thr) |
single nucleotide variant |
not provided [RCV004769470] |
Chr9:69228114 [GRCh38] Chr9:71843030 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.1980C>T (p.Pro660=) |
single nucleotide variant |
TJP2-related disorder [RCV004752257] |
Chr9:69236227 [GRCh38] Chr9:71851143 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3269A>G (p.His1090Arg) |
single nucleotide variant |
not provided [RCV004724082] |
Chr9:69251312 [GRCh38] Chr9:71866228 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2474G>A (p.Arg825Lys) |
single nucleotide variant |
TJP2-related disorder [RCV004732427] |
Chr9:69240055 [GRCh38] Chr9:71854971 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.3134T>C (p.Phe1045Ser) |
single nucleotide variant |
not provided [RCV004759919] |
|
uncertain significance |
NM_004817.4(TJP2):c.1714G>A (p.Val572Ile) |
single nucleotide variant |
Hypercholanemia, familial 1 [RCV004760302] |
Chr9:69234481 [GRCh38] Chr9:71849397 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2250G>A (p.Glu750=) |
single nucleotide variant |
TJP2-related disorder [RCV004752434] |
Chr9:69237948 [GRCh38] Chr9:71852864 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.2668-13C>G |
single nucleotide variant |
not provided [RCV004763169] |
|
uncertain significance |
NM_004817.4(TJP2):c.1671+8C>G |
single nucleotide variant |
TJP2-related disorder [RCV004751107] |
Chr9:69230240 [GRCh38] Chr9:71845156 [GRCh37] Chr9:9q21.11 |
likely benign |
NM_004817.4(TJP2):c.3263T>C (p.Met1088Thr) |
single nucleotide variant |
TJP2-related disorder [RCV004752309] |
Chr9:69251306 [GRCh38] Chr9:71866222 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.2300C>T (p.Ser767Phe) |
single nucleotide variant |
TJP2-related disorder [RCV004752357] |
Chr9:69238734 [GRCh38] Chr9:71853650 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.621_680del (p.Gln207_Asp226del) |
deletion |
TJP2-related disorder [RCV004752426] |
Chr9:69221130..69221189 [GRCh38] Chr9:71836046..71836105 [GRCh37] Chr9:9q21.11 |
uncertain significance |
NM_004817.4(TJP2):c.975T>A (p.Ser325Arg) |
single nucleotide variant |
Cholestasis, progressive familial intrahepatic, 4 [RCV004727203] |
Chr9:69225326 [GRCh38] Chr9:71840242 [GRCh37] Chr9:9q21.11 |
uncertain significance |