Il9r (interleukin 9 receptor) - Rat Genome Database

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Gene: Il9r (interleukin 9 receptor) Mus musculus
Analyze
Symbol: Il9r
Name: interleukin 9 receptor
RGD ID: 733144
MGI Page MGI
Description: Enables interleukin-9 receptor activity. Acts upstream of or within B cell activation; immunoglobulin mediated immune response; and regulation of peptidyl-tyrosine phosphorylation. Located in cell surface and plasma membrane. Is expressed in bone marrow. Orthologous to human IL9R (interleukin 9 receptor).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: IL-9 receptor; IL-9R; interleukin-9 receptor; MGC130502
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,137,544 - 32,155,283 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,137,541 - 32,150,279 (-)EnsemblGRCm39 Ensembl
GRCm381132,187,544 - 32,205,283 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,187,541 - 32,200,279 (-)EnsemblGRCm38mm10GRCm38
MGSCv371132,088,997 - 32,100,279 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,088,997 - 32,100,222 (-)NCBIMGSCv36mm8
Celera1134,604,567 - 34,617,169 (-)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.82NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. Increased expression of interleukin-9, interleukin-9 receptor, and the calcium-activated chloride channel hCLCA1 in the upper airways of patients with cystic fibrosis. Hauber HP, etal., Laryngoscope. 2003 Jun;113(6):1037-42.
2. Electronic Transfer of Homolog Data MGD and Homologene mouse data transfer
3. MGDs mouse GO annotations MGD data from the GO Consortium
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
8. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
9. IL-9 and its receptor in allergic and nonallergic lung disease: increased expression in asthma. Shimbara A, etal., J Allergy Clin Immunol. 2000 Jan;105(1 Pt 1):108-15.
Additional References at PubMed
PMID:1376929   PMID:7621883   PMID:9002663   PMID:10098325   PMID:10349636   PMID:11042159   PMID:11076861   PMID:11157800   PMID:11217851   PMID:12477932   PMID:14584047   PMID:15972666  
PMID:16141072   PMID:16141073   PMID:16266865   PMID:16602821   PMID:17312173   PMID:18551134   PMID:19139102   PMID:19342650   PMID:19433802   PMID:19596803   PMID:20159257   PMID:21400499  
PMID:21677750   PMID:21809393   PMID:21873635   PMID:22772464   PMID:24908389   PMID:24973819   PMID:28090087   PMID:29742432   PMID:29743292   PMID:29872093   PMID:29894691   PMID:30082831  
PMID:31852750   PMID:32439753   PMID:34678150   PMID:35850207   PMID:36272280   PMID:36883978  


Genomics

Comparative Map Data
Il9r
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391132,137,544 - 32,155,283 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1132,137,541 - 32,150,279 (-)EnsemblGRCm39 Ensembl
GRCm381132,187,544 - 32,205,283 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1132,187,541 - 32,200,279 (-)EnsemblGRCm38mm10GRCm38
MGSCv371132,088,997 - 32,100,279 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361132,088,997 - 32,100,222 (-)NCBIMGSCv36mm8
Celera1134,604,567 - 34,617,169 (-)NCBICelera
Cytogenetic Map11A4NCBI
cM Map1118.82NCBI
IL9R
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38Y57,184,072 - 57,197,869 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38X155,997,696 - 156,013,020 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 EnsemblX155,997,696 - 156,010,817 (+)EnsemblGRCh38hg38GRCh38
GRCh38.p14 EnsemblY57,184,216 - 57,197,337 (+)EnsemblGRCh38hg38GRCh38
GRCh37X155,227,361 - 155,240,482 (+)NCBIGRCh37GRCh37hg19GRCh37
GRCh37Y59,330,367 - 59,343,488 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36Y57,739,640 - 57,752,876 (+)NCBINCBI36Build 36hg18NCBI36
Build 36X154,880,440 - 154,893,676 (+)NCBINCBI36Build 36hg18NCBI36
Build 34Y57,668,376 - 57,681,613NCBI
CeleraX155,383,904 - 155,397,137 (+)NCBICelera
Cytogenetic MapXq28 and Yq12NCBI
HuRefX143,710,176 - 143,723,407 (+)NCBIHuRef
CHM1_1X155,138,863 - 155,152,089 (+)NCBICHM1_1
T2T-CHM13v2.0X154,225,556 - 154,239,352 (+)NCBIT2T-CHM13v2.0
T2T-CHM13v2.0Y62,422,543 - 62,435,805 (+)NCBIT2T-CHM13v2.0
Il9r
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81015,936,156 - 15,947,613 (+)NCBIGRCr8
mRatBN7.21015,431,706 - 15,444,144 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1015,431,706 - 15,441,990 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1020,177,738 - 20,189,747 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01019,666,631 - 19,678,640 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01015,159,450 - 15,171,460 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01015,697,216 - 15,708,684 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1015,696,824 - 15,710,423 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01015,592,041 - 15,642,799 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41015,678,793 - 15,690,250 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11015,679,841 - 15,691,299 (+)NCBI
Celera1015,099,236 - 15,110,693 (+)NCBICelera
Cytogenetic Map10q12NCBI
Il9r
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544217,117,429 - 17,127,451 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544217,115,207 - 17,128,899 (+)NCBIChiLan1.0ChiLan1.0
LOC100991889
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2111,195,615 - 1,206,056 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan191,197,948 - 1,208,389 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09109,268,011 - 109,277,418 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1X155,373,324 - 155,386,631 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX155,373,324 - 155,386,631 (+)Ensemblpanpan1.1panPan2
LOC611642
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1640,425,072 - 40,437,917 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
ROS_Cfam_1.0640,768,164 - 40,780,987 (+)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1640,455,718 - 40,468,536 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0640,416,646 - 40,429,464 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0640,895,831 - 40,908,650 (+)NCBIUU_Cfam_GSD_1.0
Il9r
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344112,731,632 - 112,742,605 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936501829,236 - 840,048 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936501829,236 - 840,130 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
IL9R
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl341,583,693 - 41,594,867 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1341,581,253 - 41,590,485 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2340,846,400 - 40,855,571 (-)NCBISscrofa10.2Sscrofa10.2susScr3
IL9R
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X130,006,399 - 130,019,191 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 EnsemblX130,006,899 - 130,020,894 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606568,115,543 - 68,123,772 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Il9r
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624913908,644 - 920,658 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624913906,953 - 918,906 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Il9r
747 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3012
Count of miRNA genes:785
Interacting mature miRNAs:1031
Transcripts:ENSMUST00000020518, ENSMUST00000128311, ENSMUST00000131979, ENSMUST00000142396, ENSMUST00000145401
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
10044008Hbnr15_mHeligmosomoides bakeri nematode resistance 15 (mouse)Not determined1122705234227232Mouse
1300599Cocrb11_mcocaine related behavior 11 (mouse)Not determined11267035536671472Mouse
27095904Scvln12_msacral vertebrae length 2, 10 week (mouse)11325000034495048Mouse
27095909Scvln6_msacral vertebrae length 2, 5 week (mouse)11325000044090827Mouse
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
27226741Metcl5_mmetatarsal-calcaneal length 5, 5 week (mouse)11465000046290827Mouse
27226735Metcl16_mmetatarsal-calcaneal length 16, 16 week (mouse)11525000035090827Mouse
1357518Tgyl1_mtriglyceride level 1 (mouse)Not determined11688027733916219Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
1300990Bits3_mbitterness sensitivity 3 (mouse)Not determined11837212142372260Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
1302171Pgia28_mproteoglycan induced arthritis 28 (mouse)Not determined11890609742906218Mouse
4141047Nilac1_mnicotine induced locomotor activity 1 (mouse)Not determined11901178043011942Mouse
13524844Ppiq9_mprepulse inhibition QTL 9 (mouse)11904999735077325Mouse
13463472Mcvq15_mmean corpuscular volume QTL 15 (mouse)111095123244951464Mouse
13463479Mchq19_mmean corpuscular hemoglobin QTL 19 (mouse)111095123244951464Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
10412216Eae44_mexperimental allergic encephalomyelitis susceptibility 44 (mouse)Not determined111226863739950840Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
1300607Tnbs2_mtri-nitrobenzene sulfonic acid susceptible 2 (mouse)Not determined112489805235126680Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
1301814Bbaa7_mB.burgdorferi-associated arthritis 7 (mouse)Not determined112601178044264695Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
25394552Skmw69_mskeletal muscle weight 69, TA (mouse)112969902932329535Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
25394550Skmw71_mskeletal muscle weight 71, gastroc (mouse)113127543232745567Mouse
25394551Skmw70_mskeletal muscle weight 70, EDL (mouse)113132273732594975Mouse
25394558Skmw72_mskeletal muscle weight 72, soleus (mouse)113132943032785551Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse

Markers in Region
M84746  
Mouse AssemblyChrPosition (strand)SourceJBrowse
MGSCv371132,090,258 - 32,090,353UniSTSGRCm37
Celera1134,605,832 - 34,605,927UniSTS
Cytogenetic Map11A4UniSTS
Whitehead/MRC_RH11464.49UniSTS
Whitehead_YAC11 UniSTS
Il9r  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,193,239 - 32,194,736UniSTSGRCm38
MGSCv371132,093,239 - 32,094,736UniSTSGRCm37
Celera1134,610,257 - 34,611,754UniSTS
Cytogenetic Map11A4UniSTS
cM Map11 UniSTS
M84746  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381132,190,258 - 32,190,353UniSTSGRCm38
MGSCv371132,090,258 - 32,090,353UniSTSGRCm37
Celera1134,605,832 - 34,605,927UniSTS
Cytogenetic Map11A4UniSTS
Whitehead/MRC_RH11464.49UniSTS


Expression


Sequence


RefSeq Acc Id: ENSMUST00000020518   ⟹   ENSMUSP00000020518
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,138,997 - 32,150,279 (-)Ensembl
GRCm38.p6 Ensembl1132,188,997 - 32,200,279 (-)Ensembl
RefSeq Acc Id: ENSMUST00000128311   ⟹   ENSMUSP00000119557
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,140,283 - 32,150,236 (-)Ensembl
GRCm38.p6 Ensembl1132,190,283 - 32,200,236 (-)Ensembl
RefSeq Acc Id: ENSMUST00000131979
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,144,668 - 32,150,279 (-)Ensembl
GRCm38.p6 Ensembl1132,194,668 - 32,200,279 (-)Ensembl
RefSeq Acc Id: ENSMUST00000142396   ⟹   ENSMUSP00000119185
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,140,499 - 32,150,222 (-)Ensembl
GRCm38.p6 Ensembl1132,190,499 - 32,200,222 (-)Ensembl
RefSeq Acc Id: ENSMUST00000145401   ⟹   ENSMUSP00000118204
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1132,137,541 - 32,150,222 (-)Ensembl
GRCm38.p6 Ensembl1132,187,541 - 32,200,222 (-)Ensembl
RefSeq Acc Id: NM_001134458   ⟹   NP_001127930
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,138,997 - 32,150,279 (-)NCBI
GRCm381132,188,997 - 32,200,279 (-)NCBI
MGSCv371132,088,997 - 32,100,279 (-)RGD
Celera1134,604,567 - 34,617,169 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_008374   ⟹   NP_032400
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,138,997 - 32,150,279 (-)NCBI
GRCm381132,188,997 - 32,200,279 (-)NCBI
MGSCv371132,088,997 - 32,100,279 (-)RGD
Celera1134,604,567 - 34,617,169 (-)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006514533   ⟹   XP_006514596
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,147,673 (-)NCBI
GRCm381132,187,544 - 32,199,061 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514534   ⟹   XP_006514597
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,147,673 (-)NCBI
GRCm381132,187,544 - 32,199,061 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514537   ⟹   XP_006514600
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,150,617 (-)NCBI
GRCm381132,187,544 - 32,200,611 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514538   ⟹   XP_006514601
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,150,537 (-)NCBI
GRCm381132,187,544 - 32,200,525 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514539   ⟹   XP_006514602
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,155,283 (-)NCBI
GRCm381132,187,544 - 32,205,283 (-)NCBI
Sequence:
RefSeq Acc Id: XM_006514540   ⟹   XP_006514603
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,150,537 (-)NCBI
GRCm381132,187,544 - 32,200,525 (-)NCBI
Sequence:
RefSeq Acc Id: XM_017314298   ⟹   XP_017169787
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391132,137,544 - 32,150,618 (-)NCBI
GRCm381132,187,544 - 32,200,612 (-)NCBI
Sequence:
RefSeq Acc Id: NP_032400   ⟸   NM_008374
- Peptide Label: isoform 2 precursor
- UniProtKB: Q01114 (UniProtKB/Swiss-Prot),   Q78PA5 (UniProtKB/TrEMBL),   B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001127930   ⟸   NM_001134458
- Peptide Label: isoform 1 precursor
- UniProtKB: A2AVE0 (UniProtKB/TrEMBL),   B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514602   ⟸   XM_006514539
- Peptide Label: isoform X6
- UniProtKB: A2AVE0 (UniProtKB/TrEMBL),   B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514600   ⟸   XM_006514537
- Peptide Label: isoform X3
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514601   ⟸   XM_006514538
- Peptide Label: isoform X5
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514603   ⟸   XM_006514540
- Peptide Label: isoform X7
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514597   ⟸   XM_006514534
- Peptide Label: isoform X2
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006514596   ⟸   XM_006514533
- Peptide Label: isoform X1
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169787   ⟸   XM_017314298
- Peptide Label: isoform X4
- UniProtKB: B7ZD65 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: ENSMUSP00000118204   ⟸   ENSMUST00000145401
RefSeq Acc Id: ENSMUSP00000020518   ⟸   ENSMUST00000020518
RefSeq Acc Id: ENSMUSP00000119557   ⟸   ENSMUST00000128311
RefSeq Acc Id: ENSMUSP00000119185   ⟸   ENSMUST00000142396
Protein Domains
Fibronectin type-III

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q01114-F1-model_v2 AlphaFold Q01114 1-468 view protein structure

Promoters
RGD ID:8674222
Promoter ID:EPDNEW_M15142
Type:initiation region
Name:Il9r_1
Description:Mus musculus interleukin 9 receptor , transcript variant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381132,200,281 - 32,200,341EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96564 AgrOrtholog
Ensembl Genes ENSMUSG00000020279 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000020518.11 UniProtKB/TrEMBL
  ENSMUST00000128311 ENTREZGENE
  ENSMUST00000128311.8 UniProtKB/TrEMBL
  ENSMUST00000142396.2 UniProtKB/TrEMBL
  ENSMUST00000145401 ENTREZGENE
  ENSMUST00000145401.8 UniProtKB/Swiss-Prot
Gene3D-CATH 2.60.40.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro FN3_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  FN3_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Hempt_rcpt_S_F1_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig-like_fold UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:16199 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96564 ENTREZGENE
NCBI Gene 16199 ENTREZGENE
PANTHER CYTOKINE RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  INTERLEUKIN-9 RECEPTOR UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Il9r PhenoGen
PROSITE FN3 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  HEMATOPO_REC_S_F1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF49265 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AVE0 ENTREZGENE, UniProtKB/TrEMBL
  B7ZD65 ENTREZGENE, UniProtKB/TrEMBL
  F8WJ69_MOUSE UniProtKB/TrEMBL
  IL9R_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q2M2M3_MOUSE UniProtKB/TrEMBL
  Q78PA5 ENTREZGENE, UniProtKB/TrEMBL
  Q8C2G1_MOUSE UniProtKB/TrEMBL