Nr0b2 (nuclear receptor subfamily 0, group B, member 2) - Rat Genome Database

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Gene: Nr0b2 (nuclear receptor subfamily 0, group B, member 2) Mus musculus
Analyze
Symbol: Nr0b2
Name: nuclear receptor subfamily 0, group B, member 2
RGD ID: 732874
MGI Page MGI
Description: Predicted to have several functions, including nuclear hormone receptor binding activity; peroxisome proliferator activated receptor binding activity; and protein homodimerization activity. Involved in Notch signaling pathway; circadian regulation of gene expression; and negative regulation of transcription, DNA-templated. Predicted to localize to several cellular components, including chromatin; cytoplasm; and nucleus. Is expressed in several structures, including adrenal medulla; nervous system; pancreas; sensory organ; and urinary system. Human ortholog(s) of this gene implicated in obesity and type 2 diabetes mellitus. Orthologous to human NR0B2 (nuclear receptor subfamily 0 group B member 2).
Type: protein-coding
RefSeq Status: REVIEWED
Also known as: nuclear receptor subfamily 0 group B member 2; orphan nuclear receptor SHP; S; SHP; SHP-1; Shp1; small heterodimer partner
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,280,687 - 133,283,997 (+)NCBIGRCm39mm39
GRCm39 Ensembl4133,280,687 - 133,283,847 (+)Ensembl
GRCm384133,553,376 - 133,556,686 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4133,553,376 - 133,556,536 (+)EnsemblGRCm38mm10GRCm38
MGSCv374133,109,305 - 133,112,451 (+)NCBIGRCm37mm9NCBIm37
MGSCv364132,825,466 - 132,828,612 (+)NCBImm8
Celera4131,722,949 - 131,726,070 (+)NCBICelera
Cytogenetic Map4D2.3NCBI
cM Map466.25NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-epicatechin-3-O-gallate  (ISO)
(+)-schisandrin B  (ISO)
(-)-epigallocatechin 3-gallate  (EXP,ISO)
1-[(4-chlorophenyl)-phenylmethyl]-4-methylpiperazine  (ISO)
1-naphthyl isothiocyanate  (EXP,ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
17beta-hydroxy-17-methylestra-4,9,11-trien-3-one  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,3,7,8-Tetrachlorodibenzofuran  (EXP)
2,4-dinitrotoluene  (ISO)
2-butoxyethanol  (EXP)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3-chloropropane-1,2-diol  (ISO)
3-methylcholanthrene  (ISO)
3H-1,2-dithiole-3-thione  (ISO)
4,4'-diaminodiphenylmethane  (EXP)
4,4'-sulfonyldiphenol  (EXP,ISO)
4-amino-2,6-dinitrotoluene  (ISO)
Actein  (ISO)
actinomycin D  (ISO)
aflatoxin B1  (ISO)
AICA ribonucleotide  (EXP)
aldehydo-D-glucose  (ISO)
all-trans-retinoic acid  (EXP,ISO)
amitriptyline  (ISO)
ammonium chloride  (ISO)
anthra[1,9-cd]pyrazol-6(2H)-one  (ISO)
antimony(0)  (ISO)
atorvastatin calcium  (EXP)
benzo[a]pyrene  (EXP,ISO)
benzo[a]pyrene diol epoxide I  (ISO)
bexarotene  (ISO)
bezafibrate  (EXP)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
Boldine  (ISO)
calcipotriol  (ISO)
calcium atom  (ISO)
calcium(0)  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chenodeoxycholic acid  (EXP,ISO)
chlorohydrocarbon  (ISO)
chloroquine  (EXP)
chlorpromazine  (ISO)
cholic acid  (EXP,ISO)
choline  (EXP,ISO)
chromium atom  (ISO)
ciprofloxacin  (EXP)
clofibrate  (EXP)
clofibric acid  (ISO)
clomipramine  (ISO)
clothianidin  (ISO)
clozapine  (ISO)
cobalt dichloride  (ISO)
copper(II) sulfate  (ISO)
coumarin  (ISO)
cyclosporin A  (ISO)
cyproterone acetate  (ISO)
D-glucose  (ISO)
deoxycholic acid  (EXP,ISO)
dexamethasone  (EXP,ISO)
dibutyl phthalate  (EXP,ISO)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
dicrotophos  (ISO)
diethyl maleate  (ISO)
dihydroartemisinin  (ISO)
dioscin  (ISO)
dipotassium bis[mu-tartrato(4-)]diantimonate(2-) trihydrate  (ISO)
disopyramide  (ISO)
dorsomorphin  (ISO)
emodin  (EXP)
enilconazole  (ISO)
ethanol  (EXP,ISO)
farnesol  (ISO)
fenofibrate  (EXP,ISO)
fenvalerate  (ISO)
fipronil  (ISO)
flecainide  (ISO)
fluoxetine  (ISO)
flutamide  (ISO)
fructose  (EXP)
furan  (EXP)
gallocatechin  (ISO)
gamma-hexachlorocyclohexane  (ISO)
genistein  (EXP)
ginsenoside Re  (ISO)
ginsenoside Rg2  (ISO)
glucose  (ISO)
glutathione  (ISO)
glycyrrhizinic acid  (EXP)
graphene oxide  (EXP)
guggulsterone  (EXP,ISO)
GW 3965  (ISO)
GW 4064  (EXP,ISO)
GW 7647  (ISO)
haloperidol  (ISO)
hydrogen peroxide  (ISO)
ibuprofen  (EXP)
imipenem hydrate  (EXP)
imipramine  (ISO)
isoniazide  (ISO)
ketoconazole  (ISO)
L-methionine  (EXP,ISO)
Lasiocarpine  (ISO)
lead nitrate  (EXP,ISO)
lipopolysaccharide  (EXP)
lithocholic acid  (EXP,ISO)
Loratadine  (ISO)
LY294002  (ISO)
MeIQx  (ISO)
menadione  (ISO)
metformin  (EXP)
methoxsalen  (ISO)
methylmercury chloride  (ISO)
methylmercury(1+)  (ISO)
monosodium L-glutamate  (EXP)
N,N-diethyl-m-toluamide  (ISO)
N-ethyl-N-nitrosourea  (ISO)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-nitrosomorpholine  (ISO)
nickel dichloride  (ISO)
O-methyleugenol  (ISO)
obeticholic acid  (EXP,ISO)
oleic acid  (ISO)
paracetamol  (EXP)
Paxilline  (ISO)
PD 0325901  (ISO)
pentamidine  (ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
perfluorooctanoic acid  (ISO)
perhexiline  (ISO)
phenethyl caffeate  (EXP)
phenobarbital  (EXP)
phenol  (ISO)
phosphatidylcholine  (EXP)
pirinixic acid  (EXP,ISO)
potassium dichromate  (ISO)
pravastatin  (EXP,ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
pyrazinecarboxamide  (ISO)
quercetin  (EXP,ISO)
resorcinol  (ISO)
resveratrol  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
S-adenosyl-L-homocysteine  (EXP)
S-adenosyl-L-methioninate  (EXP)
S-adenosyl-L-methionine  (EXP)
Salidroside  (EXP)
senecionine  (EXP,ISO)
sertraline  (ISO)
silicon dioxide  (ISO)
silver atom  (ISO)
silver(0)  (ISO)
sirtinol  (ISO)
sodium arsenite  (EXP,ISO)
sodium dichromate  (ISO)
sotalol  (ISO)
stigmasterol  (EXP)
streptozocin  (EXP,ISO)
sumatriptan  (ISO)
tamoxifen  (EXP,ISO)
taurocholic acid  (ISO)
tert-butyl hydroperoxide  (ISO)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
thioridazine  (ISO)
Tributyltin oxide  (ISO)
trichloroethene  (EXP)
triphenyl phosphate  (EXP)
Triptolide  (EXP)
triptonide  (EXP)
urethane  (ISO)
ursodeoxycholic acid  (EXP,ISO)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
zaragozic acid A  (EXP,ISO)
zimeldine  (ISO)
zinc acetate  (EXP)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
chromatin  (ISO)
cytoplasm  (IBA,ISO)
nucleus  (IBA,ISO)
protein-containing complex  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
References

Additional References at PubMed
PMID:8650544   PMID:9603951   PMID:10229823   PMID:10229828   PMID:10349636   PMID:10922068   PMID:11030332   PMID:11042159   PMID:11076861   PMID:11368516   PMID:11682476   PMID:11696534  
PMID:11751172   PMID:11964378   PMID:12062084   PMID:12062085   PMID:12477932   PMID:12842887   PMID:12893283   PMID:12933814   PMID:12949731   PMID:14500659   PMID:14592843   PMID:14610273  
PMID:14662855   PMID:14681479   PMID:14752053   PMID:15014077   PMID:15123650   PMID:15146238   PMID:15215307   PMID:15358835   PMID:15489334   PMID:15699129   PMID:15707893   PMID:15721253  
PMID:16141072   PMID:16141073   PMID:16213225   PMID:16282330   PMID:16557297   PMID:16614213   PMID:16888194   PMID:16971476   PMID:17074765   PMID:17145766   PMID:17204240   PMID:17289919  
PMID:17522048   PMID:17526026   PMID:17609113   PMID:18287559   PMID:18385139   PMID:18393320   PMID:18537191   PMID:18554416   PMID:18776219   PMID:18820241   PMID:18842595   PMID:18974780  
PMID:19056864   PMID:19104650   PMID:19372104   PMID:19390091   PMID:19594294   PMID:19718444   PMID:19721712   PMID:19805516   PMID:19884658   PMID:19887897   PMID:20059953   PMID:20065042  
PMID:20124506   PMID:20185821   PMID:20211142   PMID:20375098   PMID:20375256   PMID:20444884   PMID:20674862   PMID:20930048   PMID:20932939   PMID:21081708   PMID:21123943   PMID:21147283  
PMID:21262773   PMID:21267068   PMID:21459093   PMID:21566081   PMID:21641554   PMID:21725089   PMID:21725320   PMID:21746909   PMID:21873635   PMID:21949050   PMID:22171277   PMID:22349108  
PMID:22362755   PMID:22467244   PMID:22698918   PMID:22737255   PMID:23038264   PMID:23680671   PMID:23704907   PMID:23747249   PMID:23812039   PMID:23824184   PMID:23874642   PMID:24038081  
PMID:24268772   PMID:24318876   PMID:24365583   PMID:24379397   PMID:24952961   PMID:25014134   PMID:25015078   PMID:25063451   PMID:25124681   PMID:25209997   PMID:25212631   PMID:25263461  
PMID:25376397   PMID:25426871   PMID:25545350   PMID:25655831   PMID:25701738   PMID:25943116   PMID:25951943   PMID:26634251   PMID:26848619   PMID:26968209   PMID:27146480   PMID:27412403  
PMID:27471003   PMID:27664470   PMID:27770549   PMID:27956475   PMID:28003426   PMID:28167773   PMID:28214558   PMID:28273073   PMID:28446510   PMID:28570941   PMID:28586124   PMID:28891815  
PMID:29016649   PMID:29416063   PMID:29518948   PMID:29666185   PMID:29718219   PMID:30323351   PMID:30521806   PMID:30555544   PMID:30689982   PMID:31050726   PMID:31091449   PMID:31296559  
PMID:31831621  


Genomics

Comparative Map Data
Nr0b2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm394133,280,687 - 133,283,997 (+)NCBIGRCm39mm39
GRCm39 Ensembl4133,280,687 - 133,283,847 (+)Ensembl
GRCm384133,553,376 - 133,556,686 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl4133,553,376 - 133,556,536 (+)EnsemblGRCm38mm10GRCm38
MGSCv374133,109,305 - 133,112,451 (+)NCBIGRCm37mm9NCBIm37
MGSCv364132,825,466 - 132,828,612 (+)NCBImm8
Celera4131,722,949 - 131,726,070 (+)NCBICelera
Cytogenetic Map4D2.3NCBI
cM Map466.25NCBI
NR0B2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl126,911,489 - 26,913,975 (-)EnsemblGRCh38hg38GRCh38
GRCh38126,911,489 - 26,914,110 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37127,237,980 - 27,240,466 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36127,110,566 - 27,113,047 (-)NCBINCBI36hg18NCBI36
Build 34126,922,120 - 26,924,602NCBI
Celera125,635,071 - 25,637,663 (-)NCBI
Cytogenetic Map1p36.11NCBI
HuRef125,491,554 - 25,494,146 (-)NCBIHuRef
CHM1_1127,351,340 - 27,353,932 (-)NCBICHM1_1
Nr0b2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.25145,779,294 - 145,782,609 (+)NCBI
Rnor_6.0 Ensembl5151,776,004 - 151,779,319 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.05151,776,004 - 151,779,319 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.05155,465,275 - 155,468,590 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.45151,524,685 - 151,528,000 (-)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.15151,534,723 - 151,538,039 (-)NCBI
Celera5144,199,860 - 144,203,175 (+)NCBICelera
RH 3.4 Map5977.8RGD
Cytogenetic Map5q36NCBI
Nr0b2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554526,250,889 - 6,254,541 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554526,251,047 - 6,253,541 (-)NCBIChiLan1.0ChiLan1.0
NR0B2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1127,230,362 - 27,232,949 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl127,230,362 - 27,232,942 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0126,174,055 - 26,176,689 (-)NCBIMhudiblu_PPA_v0panPan3
NR0B2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1273,234,482 - 73,236,548 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl273,234,586 - 73,236,206 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha269,812,568 - 69,814,592 (+)NCBI
ROS_Cfam_1.0273,798,290 - 73,800,314 (+)NCBI
UMICH_Zoey_3.1270,623,285 - 70,625,309 (+)NCBI
UNSW_CanFamBas_1.0271,628,711 - 71,630,736 (+)NCBI
UU_Cfam_GSD_1.0272,631,901 - 72,633,925 (+)NCBI
Nr0b2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440505845,491,739 - 45,495,184 (-)NCBI
SpeTri2.0NW_00493647411,316,857 - 11,319,669 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NR0B2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl684,225,694 - 84,228,094 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1684,225,670 - 84,228,156 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2677,795,866 - 77,798,355 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NR0B2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.120105,850,328 - 105,853,076 (+)NCBI
ChlSab1.1 Ensembl20105,850,598 - 105,853,060 (+)Ensembl
Nr0b2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462476410,896,728 - 10,899,898 (-)NCBI

Position Markers
UniSTS:235056  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm384133,556,242 - 133,556,456UniSTSGRCm38
MGSCv374133,112,157 - 133,112,371UniSTSGRCm37
Celera4131,725,776 - 131,725,990UniSTS
Cytogenetic Map4D2.3UniSTS
Nr0b2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map4D2.3UniSTS
cM Map466.25UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
11567249Elorr3_methanol induced loss of righting response 3 (mouse)43722677156183778Mouse
1357895Ctrcts_mcataract severity (mouse)Not determined445709925138615442Mouse
26884437Sklq13_mskull length QTL 13, 16 week (mouse)457700000155600000Mouse
25314312Syncl2_msynaptonemal complex length 2 (mouse)465800000146500000Mouse
26884445Sklq7_mskull length QTL 7, 10 week (mouse)468100000150800000Mouse
4141549W10q10_mweight 10 weeks QTL 10 (mouse)Not determined89063832140740892Mouse
4141093W3q17_mweight 3 weeks QTL 17 (mouse)Not determined89063832140740892Mouse
4141623W6q13_mweight 6 weeks QTL 13 (mouse)Not determined89063832140740892Mouse
1357529Lvrq8_mliver weight QTL 8 (mouse)Not determined489063832140740892Mouse
39128212Lwq21_mliver weight QTL 21 (mouse)489063832140740892Mouse
1301823Bmd7_mbone mineral density 7 (mouse)Not determined489063832151570093Mouse
13208562Wght7_mweight 7 (mouse)491000000148000000Mouse
1301815Sles2_msystemic lupus erythmatosus suppressor 2 (mouse)Not determined495069342150592401Mouse
1301106Skts7_mskin tumor susceptibility 7 (mouse)Not determined4100214774134215009Mouse
1301847Fecq2_mfecundity QTL 2 (mouse)Not determined4100214774134215009Mouse
12880433Fgf23lq1_mFGF23 serum level QTL 1 (mouse)4101300000135300000Mouse
15039377Bw45_mbody weight QTL 45 (mouse)4105812001139812001Mouse
15039378Adip30_madiposity 30 (mouse)4105812001139812001Mouse
15039382Ltgq7_mliver triglyceride QTL 7 (mouse)4105812001139812001Mouse
12910794Pwbwq8_mpost-weaning body weight QTL 8 (mouse)4105978113141706527Mouse
12910797Pwgrq4_mpre-weaning growth rate QTL 4 (mouse)4105978113141706527Mouse
12910808Pwbwq9_mpost-weaning body weight QTL 9 (mouse)4105978113141706527Mouse
12910813Pwbwq4_mpre-weaning body weight QTL 4 (mouse)4105978113141706527Mouse
1357800Tgq3_mtriglyceride QTL 3 (mouse)Not determined4107161300141161387Mouse
1300663Start2_mstartle response 2 (mouse)Not determined4107371164141371360Mouse
1300809Ccrs2_mcorpus callosum hemisphere surface size 2 (mouse)Not determined4107371164141371360Mouse
1300781Lith8_mlithogenic gene 8 (mouse)Not determined4107371164141371360Mouse
1301382Arvm2_mautoimmune renal vasculitis 2 (mouse)Not determined4107897771141897963Mouse
10755520Rbc1_mred blood cell count 1 (mouse)4108583899142583899Mouse
10755522Hgb1_mhemoglobin 1 (mouse)4108583899142583899Mouse
10755521Hct1_mhematocrit 1 (mouse)4108583899142583899Mouse
1300839Dyscalc2_mdystrophic cardiac calcinosis 2 (mouse)Not determined4111115258145115487Mouse
1300743Skull6_mskull morphology 6 (mouse)Not determined4111115258145115487Mouse
15039385Mvlq3_mmacrovesicular liver lesion QTL 3 (mouse)4112288593146288593Mouse
4141001Tgq17_mtriglyceride QTL 17 (mouse)Not determined112629696146629696Mouse
10047132Albq19_malbuminuria QTL 19 (mouse)Not determined4112930596146930596Mouse
4142493Femwf13_mfemur work to failure 13 (mouse)Not determined116427367150427471Mouse
1302078Sluc21_msusceptibility to lung cancer 21 (mouse)Not determined4117673830151673964Mouse
14746982Manh56_mmandible shape 56 (mouse)4118088606152088606Mouse
1301964Bw8q2_mbody weight at 8 weeks QTL 2 (mouse)Not determined4120137122154137225Mouse
1302102Bis1_mbeta-carboline-induced seizures 1 (mouse)Not determined4120137122154137225Mouse
13503348Bntq18_mbone traits QTL 18 (mouse)4120890537154890684Mouse
10412210Cypr6_mcytokine production 6 (mouse)Not determined4120890537154890684Mouse
1300803Sluc6_msusceptibility to lung cancer 6 (mouse)Not determined4120946694154946840Mouse
4141180Ssic1_msusceptibility to small intestinal cancer 1 (mouse)Not determined120946694154946840Mouse
4142061Chlq16_mcirculating hormone level QTL 16 (mouse)Not determined4121615338155615442Mouse
1301452Elsgp1_melevated serum gp70 1 (mouse)Not determined4121615338155615442Mouse
10043985Stheal12_msoft tissue heal 12 (mouse)Not determined4121615338155615442Mouse
27226757Femd1_mfemur midshaft diameter 1, 5 week (mouse)4124100000144600000Mouse
4141065Shali2_msurvival time to hyperoxic acute lung injury 2 (mouse)Not determined124161300141845481Mouse
1300917Gasa1_mgastritis type A susceptibility locus 1 (mouse)Not determined4124161300142711450Mouse
1302149Tlsr2_mthymic lymphoma suppressor region 2 (mouse)Not determined4124371164142504390Mouse
1301525Lmb1_mlupus in MRL and B6 F2 cross (mouse)Not determined4124371164150592401Mouse
10755531Lymph3_mlymphocyte differential 3 (mouse)4124826172156508116Mouse
1301982Pltiq1_mphospholipid transfer protein inducibility QTL 1 (mouse)Not determined4124893970156508116Mouse
1300858Tafat_mtally ho associated mesenteric fat pad weight (mouse)Not determined4124893970156508116Mouse
4142139Adip12_madiposity 12 (mouse)Not determined4124893970156508116Mouse
1300933Cdcs9_mcytokine deficiency colitis susceptibility 9 (mouse)Not determined4125504302156508116Mouse
10045620Heal22_mwound healing/regeneration 22 (mouse)Not determined4125504302156508116Mouse
1300621Tpnr1_mthermal pain response 1 (mouse)Not determined4125504302156508116Mouse
11533916Mts1_mmammary tumor susceptibility 1 (mouse)4125562755156508116Mouse
4142481Gct1_mgranulosa cell tumorigenesis 1 (mouse)Not determined4128057656156508116Mouse
10043996Gct5_mgranulosa cell tumorigenesis 5 (mouse)Not determined4128057656156508116Mouse
1301793Tlsr3_mthymic lymphoma suppressor region 3 (mouse)Not determined4129572018137137225Mouse
1301584Lrdg2_mlight induced retinal degeneration 2 (mouse)Not determined4129572018151570093Mouse
25394568Skmw56_mskeletal muscle weight 56, EDL (mouse)4129965551133983265Mouse
12904009Cfq9_mconditioned fear QTL 9 (mouse)4130142494134045411Mouse
25394567Skmw55_mskeletal muscle weight 55, gastroc (mouse)4131710493133983265Mouse
4141154Nba1_mNew Zealand Black autoimmunity 1 (mouse)Not determined131923413141151964Mouse
14696808Rbcn1_mrod bipolar cell number 1 (mouse)4132220000134320000Mouse
1300874Gasa2_mgastritis type A susceptibility locus 2 (mouse)Not determined4132926037156508116Mouse
4142082Psds2_mpsoriasis-like skin disease severity 2 (mouse)Not determined4133427367137890684Mouse
1301267Bcmd2_mB cell maturation defect 2 (mouse)Not determined4133427367150704994Mouse

miRNA Target Status

Confirmed Target Of
miRNA GeneMature miRNAMethod NameResult TypeData TypeSupport TypePMID
Mir141mmu-miR-141-3pOncomiRDBexternal_infoNANA22314666

Predicted Target Of
Summary Value
Count of predictions:180
Count of miRNA genes:156
Interacting mature miRNAs:169
Transcripts:ENSMUST00000042706
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence


Reference Sequences
RefSeq Acc Id: ENSMUST00000042706   ⟹   ENSMUSP00000039175
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl4133,553,376 - 133,556,536 (+)Ensembl
RefSeq Acc Id: NM_011850   ⟹   NP_035980
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm394133,280,687 - 133,283,997 (+)NCBI
GRCm384133,553,376 - 133,556,686 (+)NCBI
MGSCv374133,109,305 - 133,112,451 (+)RGD
Celera4131,722,949 - 131,726,070 (+)RGD
cM Map4 ENTREZGENE
Sequence:
Reference Sequences
RefSeq Acc Id: NP_035980   ⟸   NM_011850
- UniProtKB: Q62227 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: ENSMUSP00000039175   ⟸   ENSMUST00000042706
Protein Domains
NR LBD

Promoters
RGD ID:6835766
Promoter ID:MM_KWN:40022
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_0Hour,   Liver
Transcripts:OTTMUST00000026136
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv364133,109,054 - 133,109,554 (+)MPROMDB
RGD ID:6884958
Promoter ID:EPDNEW_M5930
Type:multiple initiation site
Name:Nr0b2_1
Description:Mus musculus nuclear receptor subfamily 0, group B, member 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm384133,553,379 - 133,553,439EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1346344 AgrOrtholog
Ensembl Genes ENSMUSG00000037583 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein ENSMUSP00000039175 ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000042706 ENTREZGENE, UniProtKB/Swiss-Prot
Gene3D-CATH 1.10.565.10 UniProtKB/Swiss-Prot
InterPro NHR-like_dom_sf UniProtKB/Swiss-Prot
  NR0B1/2 UniProtKB/Swiss-Prot
  Nucl_hrmn_rcpt_lig-bd UniProtKB/Swiss-Prot
  Nuclear_hrmn_rcpt UniProtKB/Swiss-Prot
KEGG Report mmu:23957 UniProtKB/Swiss-Prot
MGD MGI:1346344 ENTREZGENE
NCBI Gene 23957 ENTREZGENE
PANTHER PTHR24081 UniProtKB/Swiss-Prot
Pfam Hormone_recep UniProtKB/Swiss-Prot
PhenoGen Nr0b2 PhenoGen
PRINTS STRDHORMONER UniProtKB/Swiss-Prot
PROSITE NR_LBD UniProtKB/Swiss-Prot
SMART HOLI UniProtKB/Swiss-Prot
Superfamily-SCOP SSF48508 UniProtKB/Swiss-Prot
UniProt NR0B2_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary Q53Z53 UniProtKB/Swiss-Prot