Abcg8 (ATP binding cassette subfamily G member 8) - Rat Genome Database

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Gene: Abcg8 (ATP binding cassette subfamily G member 8) Mus musculus
Analyze
Symbol: Abcg8
Name: ATP binding cassette subfamily G member 8
RGD ID: 732771
MGI Page MGI
Description: Exhibits protein heterodimerization activity. Contributes to cholesterol transfer activity. Involved in cholesterol homeostasis; excretion; and lipid transport. Localizes to apical plasma membrane; integral component of plasma membrane; and receptor complex. Used to study sitosterolemia. Human ortholog(s) of this gene implicated in arteriosclerosis; familial hyperlipidemia; gallbladder disease; obesity; and sitosterolemia. Orthologous to human ABCG8 (ATP binding cassette subfamily G member 8); PARTICIPATES IN bile acid signaling pathway; bile acid transport pathway; INTERACTS WITH 1,2,3-trilinolenoylglycerol; 1,2,3-trilinoleoylglycerol; 17alpha-ethynylestradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 1300003C16Rik; AI114946; ATP-binding cassette sub-family G member 8; ATP-binding cassette, sub-family G (WHITE), member 8; Ster; sterolin 2; sterolin-2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391784,983,730 - 85,007,761 (+)NCBIGRCm39mm39
GRCm39 Ensembl1784,983,730 - 85,007,761 (+)Ensembl
GRCm381784,676,302 - 84,700,333 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1784,676,302 - 84,700,333 (+)EnsemblGRCm38mm10GRCm38
MGSCv371785,082,471 - 85,099,673 (+)NCBIGRCm37mm9NCBIm37
MGSCv361784,591,457 - 84,608,659 (+)NCBImm8
Celera1789,050,583 - 89,068,069 (+)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1755.02NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2,3-trilinolenoylglycerol  (EXP)
1,2,3-trilinoleoylglycerol  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (EXP,ISO)
17beta-estradiol  (ISO)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP,ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (ISO)
7-ketocholesterol  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
amitriptyline  (ISO)
ammonium chloride  (ISO)
androst-4-ene-3,17-dione  (ISO)
atorvastatin calcium  (EXP)
aztreonam  (EXP)
benzo[a]pyrene  (ISO)
beta-hexachlorocyclohexane  (ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (EXP,ISO)
bosentan  (ISO)
cadmium dichloride  (ISO)
carbon nanotube  (EXP)
chenodeoxycholic acid  (EXP,ISO)
chlorpromazine  (ISO)
chlorpyrifos  (ISO)
cholate  (EXP)
cholesterol  (EXP,ISO)
cholic acid  (EXP)
clofibrate  (EXP)
cobalt dichloride  (ISO)
cyclosporin A  (ISO)
DDE  (ISO)
dehydroepiandrosterone  (ISO)
deoxycholic acid  (EXP)
diosgenin  (EXP,ISO)
endosulfan  (ISO)
erythromycin estolate  (ISO)
fenofibrate  (ISO)
fipronil  (EXP,ISO)
fonofos  (ISO)
fumonisin B1  (EXP)
GW 3965  (EXP)
GW 4064  (EXP)
imipenem hydrate  (EXP)
indole-3-methanol  (ISO)
leflunomide  (ISO)
lithocholic acid  (EXP)
lovastatin  (EXP)
mercury dichloride  (EXP)
metformin  (ISO)
metronidazole  (EXP)
N-nitrosodiethylamine  (ISO)
N-nitrosodimethylamine  (ISO)
N-Nitrosopyrrolidine  (ISO)
nefazodone  (ISO)
O-methyleugenol  (ISO)
paracetamol  (EXP,ISO)
perfluorohexanesulfonic acid  (EXP)
perfluorononanoic acid  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP,ISO)
perfluorooctanoic acid  (EXP,ISO)
phenformin  (ISO)
phenobarbital  (EXP)
pirinixic acid  (EXP)
pravastatin  (ISO)
pregnenolone 16alpha-carbonitrile  (ISO)
progesterone  (ISO)
propiconazole  (EXP)
quercetin  (ISO)
rifampicin  (ISO)
rotenone  (ISO)
simvastatin  (ISO)
sodium arsenite  (EXP,ISO)
sodium citrate  (ISO)
spironolactone  (ISO)
stigmasterol  (ISO)
streptozocin  (EXP)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
tetracycline  (EXP)
thioacetamide  (ISO)
toluene  (ISO)
triolein  (EXP)
triphenyl phosphate  (ISO)
triptonide  (EXP)
troglitazone  (EXP)
urethane  (ISO)
ursodeoxycholic acid  (EXP)
valproic acid  (EXP,ISO)
vancomycin  (EXP)
zidovudine  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal cellular cholesterol metabolism  (IAGP)
abnormal cholesterol homeostasis  (IEA)
abnormal feces composition  (IAGP)
abnormal hepatobiliary system physiology  (IAGP)
abnormal intestinal cholesterol absorption  (IAGP)
abnormal liver morphology  (IEA)
abnormal phytosterol level  (IAGP)
abnormal spleen morphology  (IEA)
cataract  (IEA)
decreased cholesterol efflux  (IAGP)
decreased cholesterol level  (IAGP)
decreased circulating cholesterol level  (IAGP)
decreased circulating iron level  (IEA)
decreased circulating serum albumin level  (IEA)
decreased hematocrit  (IEA)
decreased hemoglobin content  (IEA)
decreased mean corpuscular hemoglobin  (IEA)
decreased mean corpuscular hemoglobin concentration  (IEA)
decreased mean corpuscular volume  (IEA)
decreased phytosterol level  (IAGP)
enlarged liver  (IEA)
enlarged spleen  (IEA)
female infertility  (IEA)
impaired righting response  (IEA)
increased body weight  (IEA)
increased cholesterol level  (IAGP)
increased circulating alkaline phosphatase level  (IEA)
increased circulating cholesterol level  (IEA)
increased circulating creatinine level  (IEA)
increased circulating phytosterol level  (IAGP)
increased circulating potassium level  (IEA)
increased circulating triglyceride level  (IAGP)
increased intestinal phytosterol absorption  (IAGP)
increased mean platelet volume  (IEA)
increased phytosterol level  (IAGP)
increased red blood cell distribution width  (IEA)
increased spleen weight  (IEA)
male infertility  (IEA)
thick ventricular wall  (IEA)
References

Additional References at PubMed
PMID:10349636   PMID:11042159   PMID:11076861   PMID:11907139   PMID:12150943   PMID:12208859   PMID:12208867   PMID:12208868   PMID:12477932   PMID:12601003   PMID:12763362   PMID:12777468  
PMID:12949731   PMID:14504269   PMID:14657202   PMID:14681479   PMID:14701919   PMID:14872007   PMID:14993241   PMID:15040800   PMID:15102882   PMID:15372105   PMID:15611112   PMID:15619238  
PMID:15930515   PMID:16141072   PMID:16141073   PMID:16151694   PMID:16179600   PMID:16602821   PMID:16614371   PMID:16677856   PMID:16685081   PMID:16741293   PMID:16867993   PMID:17060690  
PMID:17393508   PMID:17561514   PMID:17571164   PMID:17825296   PMID:17854600   PMID:18156627   PMID:18356535   PMID:18402465   PMID:18466903   PMID:18509196   PMID:18796403   PMID:19637290  
PMID:19846887   PMID:20659465   PMID:21085640   PMID:21209088   PMID:21267068   PMID:21315718   PMID:21677750   PMID:21855652   PMID:21873635   PMID:21885848   PMID:22454430   PMID:22669916  
PMID:22715101   PMID:23180829   PMID:23380580   PMID:23401258   PMID:23926302   PMID:24811295   PMID:24929016   PMID:25060694   PMID:25378657   PMID:25676339   PMID:26365598   PMID:26520893  
PMID:27014967   PMID:28065787   PMID:28268212   PMID:29891894   PMID:31641224  


Genomics

Comparative Map Data
Abcg8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391784,983,730 - 85,007,761 (+)NCBIGRCm39mm39
GRCm39 Ensembl1784,983,730 - 85,007,761 (+)Ensembl
GRCm381784,676,302 - 84,700,333 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1784,676,302 - 84,700,333 (+)EnsemblGRCm38mm10GRCm38
MGSCv371785,082,471 - 85,099,673 (+)NCBIGRCm37mm9NCBIm37
MGSCv361784,591,457 - 84,608,659 (+)NCBImm8
Celera1789,050,583 - 89,068,069 (+)NCBICelera
Cytogenetic Map17E4NCBI
cM Map1755.02NCBI
ABCG8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 Ensembl243,831,942 - 43,882,988 (+)EnsemblGRCh38hg38GRCh38
GRCh38243,831,942 - 43,882,988 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh37244,066,110 - 44,110,127 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36243,919,607 - 43,959,109 (+)NCBINCBI36hg18NCBI36
Build 34243,977,753 - 44,017,255NCBI
Celera243,904,835 - 43,944,326 (+)NCBI
Cytogenetic Map2p21NCBI
HuRef243,802,799 - 43,841,930 (+)NCBIHuRef
CHM1_1243,995,502 - 44,035,021 (+)NCBICHM1_1
Abcg8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.269,945,629 - 9,964,912 (-)NCBI
Rnor_6.0 Ensembl67,961,413 - 7,980,708 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.067,961,413 - 7,980,708 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.067,897,005 - 7,916,593 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.468,064,631 - 8,083,271 (+)NCBIRGSC3.4rn4RGSC3.4
RGSC_v3.168,064,630 - 8,083,271 (+)NCBI
Celera69,667,270 - 9,686,500 (-)NCBICelera
Cytogenetic Map6q12NCBI
Abcg8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544110,982,307 - 11,009,116 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495544110,982,307 - 11,004,789 (+)NCBIChiLan1.0ChiLan1.0
ABCG8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.12A44,771,247 - 44,905,375 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2A44,771,247 - 44,904,830 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v02A43,922,787 - 43,966,678 (+)NCBIMhudiblu_PPA_v0panPan3
ABCG8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11046,300,142 - 46,319,592 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1046,300,165 - 46,319,229 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1046,161,869 - 46,181,385 (+)NCBI
ROS_Cfam_1.01047,178,745 - 47,198,241 (+)NCBI
UMICH_Zoey_3.11046,887,146 - 46,906,668 (+)NCBI
UNSW_CanFamBas_1.01047,176,806 - 47,196,259 (+)NCBI
UU_Cfam_GSD_1.01047,360,439 - 47,379,994 (+)NCBI
Abcg8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629236,645,685 - 36,664,967 (-)NCBI
SpeTri2.0NW_0049365088,074,697 - 8,093,424 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ABCG8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl396,594,778 - 96,616,229 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1396,596,975 - 96,616,224 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.23102,751,981 - 102,768,385 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ABCG8
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11463,389,817 - 63,420,048 (-)NCBI
ChlSab1.1 Ensembl1463,390,433 - 63,413,906 (-)Ensembl
Abcg8
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_00462473825,310,740 - 25,330,097 (+)NCBI

Position Markers
AI114946  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381784,699,054 - 84,699,198UniSTSGRCm38
MGSCv371785,098,394 - 85,098,538UniSTSGRCm37
Celera1789,066,790 - 89,066,934UniSTS
Cytogenetic Map17E4UniSTS
cM Map1754.5UniSTS
Whitehead/MRC_RH171059.57UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1301338Lmr1_mleishmaniasis resistance 1 (mouse)Not determined17986241186688972Mouse
1357532Bmch7_mbone mechanical trait 7 (mouse)Not determined175145143085451617Mouse
4141879Chlq9_mcirculating hormone level QTL 9 (mouse)Not determined175145143085451617Mouse
4141758Pstc5_mperiosteal circumference 5 (mouse)Not determined175680065690800808Mouse
4141011Bmd26_mbone mineral density 26 (mouse)Not determined175680065690800808Mouse
1300735Pgia20_mproteoglycan induced arthritis 20 (mouse)Not determined175680065690800808Mouse
1357447Heal13_mwound healing/regeneration 13 (mouse)Not determined175680065690800808Mouse
12910536Nrq8a_mnoise-induced hearing loss resistant QTL 8a (mouse)175680065690800808Mouse
12910537Nrq8_mnoise-induced hearing loss resistant QTL 8 (mouse)175680065690800808Mouse
4142414Pregq4_mpregnancy QTL 4 (mouse)Not determined175722744793199751Mouse
4141040Hmtb9_mhemostasis and thrombosis rebleeding time 9 (mouse)Not determined5728209491282202Mouse
1301107Scc4_mcolon tumor susceptibility 4 (mouse)Not determined176199358194987271Mouse
11528551Sluc32_msusceptibility to lung cancer 32 (mouse)176199358194987271Mouse
1302017Aliq3_macute lung injury QTL 3 (mouse)Not determined176357811994987271Mouse
1301728Ffal1_mfree fatty acid level 1 (mouse)Not determined176490750994987271Mouse
14928308Manh82_mmandible shape 82 (mouse)176600781494987271Mouse
4142256Nilac12_mnicotine induced locomotor activity 12 (mouse)Not determined176863389194987271Mouse
11039498Ltpr7b_mLeishmania tropica response 7b (mouse)177039377094987271Mouse
11039499Ltpr7a_mLeishmania tropica response 7a (mouse)177039377094987271Mouse
11039500Ltpr7c_mLeishmania tropica response 7c (mouse)177039377094987271Mouse
11039514Ltpr7_mLeishmania tropica response 7 (mouse)177039377094987271Mouse
1357528Nhdlq3_mnon-HDL QTL 3 (mouse)Not determined177308770494987271Mouse
4141195Nilac11_mnicotine induced locomotor activity 11 (mouse)Not determined177308770494987271Mouse
4141697Hbnr3_mHeligmosomoides bakeri nematode resistance 3 (mouse)Not determined7380065693199751Mouse
1357552Aaj4_manxiety in A/J 4 (mouse)Not determined177428209490087842Mouse
1357646Axtq3_manxiety QTL 3 (mouse)Not determined177428209490087842Mouse
14697708Stsl5_mSalmonella typhimurium susceptibility locus 5 (mouse)178050000091100000Mouse
1300889Lith9_mlithogenic gene 9 (mouse)Not determined178465823484683011Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:909
Count of miRNA genes:468
Interacting mature miRNAs:550
Transcripts:ENSMUST00000045714, ENSMUST00000170725, ENSMUST00000171915
Prediction methods:Miranda, Pita, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001286005 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001347418 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_026180 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_104382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC165360 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF324495 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF404108 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AH011518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004871 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK008188 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK050938 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AX685731 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY196215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY196216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC138484 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC145293 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000045714   ⟹   ENSMUSP00000035246
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1784,683,121 - 84,700,333 (+)Ensembl
RefSeq Acc Id: ENSMUST00000170725   ⟹   ENSMUSP00000127785
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1784,676,302 - 84,699,333 (+)Ensembl
RefSeq Acc Id: ENSMUST00000171915   ⟹   ENSMUSP00000126675
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 Ensembl1784,683,131 - 84,698,963 (+)Ensembl
RefSeq Acc Id: NM_001286005   ⟹   NP_001272934
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391784,983,730 - 85,007,761 (+)NCBI
GRCm381784,676,302 - 84,700,333 (+)NCBI
Celera1789,043,620 - 89,068,069 (+)NCBI
Sequence:
RefSeq Acc Id: NM_001347418   ⟹   NP_001334347
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391784,990,549 - 85,007,761 (+)NCBI
GRCm381784,683,121 - 84,700,333 (+)NCBI
Sequence:
RefSeq Acc Id: NM_026180   ⟹   NP_080456
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391784,990,549 - 85,007,761 (+)NCBI
GRCm381784,683,121 - 84,700,333 (+)NCBI
MGSCv371785,082,471 - 85,099,673 (+)RGD
Celera1789,043,620 - 89,068,069 (+)NCBI
cM Map17 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_104382
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391784,990,549 - 85,007,761 (+)NCBI
GRCm381784,683,121 - 84,700,333 (+)NCBI
Celera1789,043,620 - 89,068,069 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_080456   ⟸   NM_026180
- Peptide Label: isoform 1
- UniProtKB: Q9DBM0 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: NP_001272934   ⟸   NM_001286005
- Peptide Label: isoform 2
- UniProtKB: Q9DBM0 (UniProtKB/Swiss-Prot),   E9Q0P2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001334347   ⟸   NM_001347418
- Peptide Label: isoform 3
- UniProtKB: Q9DBM0 (UniProtKB/Swiss-Prot),   Q7TSR6 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000035246   ⟸   ENSMUST00000045714
RefSeq Acc Id: ENSMUSP00000126675   ⟸   ENSMUST00000171915
RefSeq Acc Id: ENSMUSP00000127785   ⟸   ENSMUST00000170725
Promoters
RGD ID:13676898
Promoter ID:EPDNEW_M22598
Type:initiation region
Name:Abcg8_1
Description:Mus musculus ATP binding cassette subfamily G member 8 , transcriptvariant 1, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381784,683,178 - 84,683,238EPDNEW
RGD ID:6827744
Promoter ID:MM_KWN:24337
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Liver
Transcripts:ENSMUST00000066175,   NM_026180,   UC008DTB.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361785,082,166 - 85,082,666 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1914720 AgrOrtholog
Ensembl Genes ENSMUSG00000024254 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000035246 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000126675 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUSP00000127785 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000045714 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000170725 ENTREZGENE, UniProtKB/TrEMBL
  ENSMUST00000171915 ENTREZGENE, UniProtKB/TrEMBL
InterPro ABC_2_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_transporter_CS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABCG_dom UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  P-loop_NTPase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:67470 UniProtKB/Swiss-Prot
MGD MGI:1914720 ENTREZGENE
NCBI Gene 67470 ENTREZGENE
Pfam ABC2_membrane UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC2_membrane_7 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_tran UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Abcg8 PhenoGen
PROSITE ABC_TRANSPORTER_1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  ABC_TRANSPORTER_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF52540 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ABCG8_MOUSE UniProtKB/Swiss-Prot
  E9Q0P2 ENTREZGENE, UniProtKB/TrEMBL
  Q7TSR6 ENTREZGENE, UniProtKB/TrEMBL
  Q7TSR7_MOUSE UniProtKB/TrEMBL
  Q8C1P5_MOUSE UniProtKB/TrEMBL
  Q923R9_MOUSE UniProtKB/TrEMBL
  Q9DBM0 ENTREZGENE
UniProt Secondary Q8R543 UniProtKB/Swiss-Prot


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-08-22 Abcg8  ATP binding cassette subfamily G member 8    ATP-binding cassette, sub-family G (WHITE), member 8  Symbol and/or name change 5135510 APPROVED