Acmsd (amino carboxymuconate semialdehyde decarboxylase)

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Gene: Acmsd (amino carboxymuconate semialdehyde decarboxylase) Mus musculus

Analyze

Symbol:

Acmsd

Name:

amino carboxymuconate semialdehyde decarboxylase

RGD ID:

732598

MGI Page

MGI

Description:

Predicted to have aminocarboxymuconate-semialdehyde decarboxylase activity and zinc ion binding activity. Predicted to be involved in several processes, including aging; carboxylic acid metabolic process; and negative regulation of quinolinate biosynthetic process. Predicted to localize to cytosol. Orthologous to human ACMSD (aminocarboxymuconate semialdehyde decarboxylase); PARTICIPATES IN kynurenine metabolic pathway; tryptophan metabolic pathway; INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bis(2-ethylhexyl) phthalate; bisphenol A.

Type:

protein-coding

RefSeq Status:

PROVISIONAL

Also known as:

2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; picolinate carboxylase

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

Latest Assembly:

GRCm38 - Mouse Genome Assembly GRCm38

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	127,657,150 - 127,695,301 (+)	NCBI	GRCm39		mm39
GRCm38	1	127,729,413 - 127,767,564 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	127,729,413 - 127,767,978 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	129,625,990 - 129,664,141 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	1	129,556,959 - 129,595,110 (+)	NCBI			mm8
Celera	1	130,370,820 - 130,409,013 (+)	NCBI		Celera
Cytogenetic Map	1	E3	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Experimental Diabetes Mellitus (ISO)

kidney failure (ISO)

Puromycin Aminonucleoside Nephrosis (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-schisandrin B (ISO)

1-nitropropane (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,4-diaminotoluene (ISO)

2,6-diaminotoluene (ISO)

2-acetamidofluorene (ISO)

2-nitro-p-phenylenediamine (ISO)

2-nitropropane (ISO)

3'-amino-3'-deoxy-N(6),N(6)-dimethyladenosine (ISO)

3-[3-(tert-butylsulfanyl)-1-(4-chlorobenzyl)-5-(propan-2-yl)-1H-indol-2-yl]-2,2-dimethylpropanoic acid (ISO)

4-acetylaminofluorene (ISO)

4-nitro-1,2-phenylenediamine (ISO)

acetamide (ISO)

acrylamide (ISO)

adenine (ISO)

aflatoxin B1 (ISO)

ammonium chloride (ISO)

benzo[a]pyrene (ISO)

bis(2-ethylhexyl) phthalate (EXP,ISO)

bisphenol A (EXP,ISO)

carbon nanotube (EXP)

cefaloridine (ISO)

chlorpyrifos (ISO)

clofibric acid (ISO)

cyclosporin A (ISO)

diazinon (ISO)

dibutyl phthalate (ISO)

furan (EXP,ISO)

gentamycin (ISO)

hydroquinone O-beta-D-glucopyranoside (ISO)

kojic acid (ISO)

linoleic acid (ISO)

metformin (ISO)

N-nitrosodiethylamine (ISO)

NAD zwitterion (ISO)

NAD(+) (ISO)

nicotinic acid (ISO)

O-methyleugenol (ISO)

paracetamol (ISO)

pentanal (ISO)

phenformin (ISO)

pirinixic acid (EXP,ISO)

propanal (ISO)

pyrazine-2-carboxylic acid (ISO)

quinolinic acid (ISO)

resveratrol (ISO)

rotenone (ISO)

silicon dioxide (ISO)

sodium arsenite (ISO)

streptozocin (ISO)

Tesaglitazar (ISO)

tetrachloromethane (ISO)

trichloroethene (EXP)

valproic acid (ISO)

zoledronic acid (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

aging (ISO)

negative regulation of quinolinate biosynthetic process (ISO)

quinolinate metabolic process (ISO)

secondary metabolic process (IBA)

tryptophan catabolic process (ISO)

Cellular Component

cytoplasm (IBA)

cytosol (IBA,ISO)

Molecular Function

aminocarboxymuconate-semialdehyde decarboxylase activity (ISO)

carboxy-lyase activity (IBA)

hydrolase activity (IEA)

lyase activity (IEA)

metal ion binding (IEA)

protein binding (ISO)

zinc ion binding (ISO)

Molecular Pathway Annotations Click to see Annotation Detail View

kynurenine metabolic pathway (ISO)

tryptophan metabolic pathway (IEA,ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

decreased circulating bilirubin level (IEA)

decreased circulating iron level (IEA)

decreased circulating lipase level (IEA)

increased bone mineral density (IEA)

References

References - curated


1.	Egashira Y, etal., Int J Vitam Nutr Res. 2006 Jan;76(1):28-33. doi: 10.1024/0300-9831.76.1.28.
2.	Fukuoka S, etal., J Biol Chem 2002 Sep 20;277(38):35162-7.
3.	Maddison DC and Giorgini F, Semin Cell Dev Biol. 2015 Apr;40:134-41. doi: 10.1016/j.semcdb.2015.03.002. Epub 2015 Mar 12.
4.	MGD and Homologene mouse data transfer
5.	MGD data from the GO Consortium
6.	Pipeline to import KEGG annotations from KEGG into RGD
7.	Pipeline to import SMPDB annotations from SMPDB into RGD
8.	RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
9.	RGD automated import pipeline for gene-chemical interactions
10.	Saito K, etal., Am J Physiol Renal Physiol. 2000 Sep;279(3):F565-72. doi: 10.1152/ajprenal.2000.279.3.F565.
11.	Sasaki N, etal., Eur J Nutr. 2009 Apr;48(3):145-53. doi: 10.1007/s00394-009-0774-7. Epub 2009 Jan 23.
12.	Tanabe A, etal., J Nutr. 2002 Jun;132(6):1153-9. doi: 10.1093/jn/132.6.1153.

Additional References at PubMed

PMID:10349636	PMID:11042159	PMID:11076861	PMID:11217851	PMID:12466851	PMID:12477932	PMID:16141072	PMID:16141073	PMID:16807375	PMID:21873635	PMID:22496890	PMID:30232574
PMID:30356218

Genomics

Comparative Map Data

Acmsd
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	127,657,150 - 127,695,301 (+)	NCBI	GRCm39		mm39
GRCm38	1	127,729,413 - 127,767,564 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	127,729,413 - 127,767,978 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	129,625,990 - 129,664,141 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	1	129,556,959 - 129,595,110 (+)	NCBI			mm8
Celera	1	130,370,820 - 130,409,013 (+)	NCBI		Celera
Cytogenetic Map	1	E3	NCBI

ACMSD
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38.p13 Ensembl	2	134,838,616 - 134,902,034 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh38	2	134,838,319 - 134,902,906 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh37	2	135,596,186 - 135,659,604 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
GRCh37	2	135,595,994 - 135,659,604 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	135,312,656 - 135,376,074 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	2	135,429,919 - 135,493,332	NCBI
Celera	2	129,309,109 - 129,372,527 (+)	NCBI
Cytogenetic Map	2	q21.3	NCBI
HuRef	2	127,587,573 - 127,651,049 (+)	NCBI		HuRef
CHM1_1	2	135,600,992 - 135,664,414 (+)	NCBI		CHM1_1

Acmsd
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	13	39,200,486 - 39,244,337 (+)	NCBI
Rnor_6.0 Ensembl	13	44,424,689 - 44,468,734 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_6.0	13	44,424,689 - 44,468,734 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	13	49,510,444 - 49,553,512 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	40,547,366 - 40,573,698 (-)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	13	40,561,408 - 40,587,743 (-)	NCBI
Celera	13	39,577,658 - 39,620,559 (+)	NCBI		Celera
Cytogenetic Map	13	q13	NCBI

Acmsd
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955440	2,348,396 - 2,412,706 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955440	2,348,434 - 2,412,706 (+)	NCBI	ChiLan1.0	ChiLan1.0

ACMSD
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	2B	138,918,281 - 138,978,407 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	138,918,281 - 138,978,407 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	2B	24,958,661 - 25,019,901 (-)	NCBI	Mhudiblu_PPA_v0		panPan3

ACMSD
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1 Ensembl	19	37,659,226 - 37,725,172 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
CanFam3.1	19	37,658,999 - 37,725,426 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1

Acmsd
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
SpeTri2.0	NW_004936469	40,858,338 - 40,904,807 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

ACMSD
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	17,106,724 - 17,163,899 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	17,121,950 - 17,164,005 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	19,522,142 - 19,538,454 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

ACMSD
(Chlorocebus sabaeus - African green monkey)

Vervet Assembly	Chr	Position (strand)	Source	Genome Browsers
Vervet Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	19,063,731 - 19,128,387 (+)	NCBI
ChlSab1.1 Ensembl	10	19,064,115 - 19,129,089 (+)	Ensembl

Acmsd
(Heterocephalus glaber - naked mole-rat)

Molerat Assembly	Chr	Position (strand)	Source	Genome Browsers
Molerat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624732	34,232,890 - 34,294,195 (+)	NCBI

QTLs in Region (GRCm38)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
13824984	Twq5_m	testis weight QTL 5 (mouse)					1	3000000	185000000	Mouse
1357753	Kidq2_m	kidney weight QTL 2 (mouse)			Not determined		1	34721057	150318120	Mouse
1357488	Splq3_m	spleen weight QTL 3 (mouse)			Not determined		1	34721057	150318120	Mouse
1558860	W10q7_m	weight 10 weeks QTL 7 (mouse)			Not determined		1	34721057	150318120	Mouse
1301722	Cia9_m	collagen induced arthritis QTL 9 (mouse)			Not determined		1	45744740	189571420	Mouse
4142291	Aec2_m	autoimmune exocrinopathy 2 (mouse)			Not determined			52418578	182423027	Mouse
10412185	Hcs9_m	hepatocarcinogenesis susceptibility 9 (mouse)			Not determined		1	63815531	189571420	Mouse
1300841	Ssial1_m	susceptibility to sialadenitis 1 (mouse)			Not determined		1	63880843	153681816	Mouse
27095918	Ulnl1_m	ulna length 1, 5 week (mouse)					1	67300000	129800000	Mouse
1300989	Lrdg1_m	light induced retinal degeneration 1 (mouse)			Not determined		1	73716016	147249632	Mouse
4141914	Gcsfis_m	G-CSF induced splenomegaly (mouse)			Not determined			74477076	148839837	Mouse
1357847	Jckm2_m	juvenile cystic kidney modifier 2 (mouse)			Not determined		1	74952818	133363199	Mouse
27095931	Pglq1_m	pelvic girdle length QTL 1, 5 week (mouse)					1	76000000	128600000	Mouse
27095928	Pglq6_m	pelvic girdle length QTL 6, 10 week (mouse)					1	76000000	148900000	Mouse
26884448	Sklq1_m	skull length QTL 1, 5 week (mouse)					1	76000000	181500000	Mouse
1301350	Nidd4k_m	Nidd4 on KK-A (mouse)			Not determined		7	82314261	147249632	Mouse
1357439	Popoa_m	premature ovulation and primary oocyte arrest (mouse)			Not determined		1	82665468	135687641	Mouse
27095913	Scvln2_m	sacral vertebrae length 2, 5 week (mouse)					1	94200000	148900000	Mouse
27095901	Scvln8_m	sacral vertebrae length 2, 10 week (mouse)					1	94200000	172200000	Mouse
27226779	Tibl1_m	tibia length 1, 5 week (mouse)					1	95600000	162200000	Mouse
1301123	Cd8mts2_m	CD8 memory T cell subset 2 (mouse)			Not determined		1	96690656	130690827	Mouse
1301753	Tir3a_m	trypansomiasis infection response 3a (mouse)			Not determined		1	97126256	131126460	Mouse
1301536	Pbbcp1_m	peripheral blood B cell percentage 1 (mouse)			Not determined		1	99579930	133580115	Mouse
1301193	Lxw3_m	lupus BXSB x NZW 3 (mouse)			Not determined		1	103040804	137040937	Mouse
10412162	Nobq3_m	New Zealand obese QTL 3 (mouse)			Not determined		1	104005680	191493284	Mouse
12790994	Aaaq1_m	aortic arch angle QTL 1 (mouse)					1	109568206	143568206	Mouse
1301979	Melm1_m	melanoma modifier 1 (mouse)			Not determined		1	109710525	143710742	Mouse
1357600	Obq17_m	obesity QTL 17 (mouse)			Not determined		1	110625442	144625561	Mouse
10401248	Bglu12_m	blood glucose level 12 (mouse)			Not determined		1	110625442	144625561	Mouse
1301149	Lrnx12_m	learning-contextual 12 (mouse)			Not determined		1	112081092	168358833	Mouse
1302098	Eila1_m	ethanol induced locomotor activity 1 (mouse)			Not determined		1	112081092	175641372	Mouse
1301249	Sbw1_m	splenomegaly-NZB x NZW 1 (mouse)			Not determined		1	112203268	146203348	Mouse
10045640	Jckm4_m	juvenile cystic kidney modifier 4 (mouse)			Not determined		1	116363098	150363199	Mouse
27095915	Scvln13_m	sacral vertebrae length 2, 16 week (mouse)					1	117600000	180000000	Mouse
1302161	Exq2_m	exploratory and excitability QTL 2 (mouse)			Not determined		1	118171982	152172078	Mouse
27226714	Metcl1_m	metatarsal-calcaneal length 1, 5 week (mouse)					1	121800000	139800000	Mouse
27226740	Metcl13_m	metatarsal-calcaneal length 13, 16 week (mouse)					1	121800000	153900000	Mouse
27226743	Metcl7_m	metatarsal-calcaneal length 7, 10 week (mouse)					1	121800000	154000000	Mouse
27226767	Tibl10_m	tibia length 10, 10 week (mouse)					1	121800000	165000000	Mouse
27226799	Feml5_m	femur length 5, 5 week (mouse)					1	122100000	165000000	Mouse
12880408	V125Dq3_m	vitamin D active form serum level QTL 3 (mouse)					1	123000000	157000000	Mouse

miRNA Target Status

Predicted Target Of

	Summary Value
Count of predictions:	336
Count of miRNA genes:	246
Interacting mature miRNAs:	282
Transcripts:	ENSMUST00000038006
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001033041	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB071419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC121883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC132109	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK143962	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK165228	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC139281	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466520	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000038006 ⟹ ENSMUSP00000048482

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	1	127,729,413 - 127,767,978 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000186537

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38.p6 Ensembl	1	127,756,757 - 127,767,978 (+)	Ensembl

RefSeq Acc Id:

NM_001033041 ⟹ NP_001028213

RefSeq Status:

PROVISIONAL

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	1	127,657,150 - 127,695,301 (+)	NCBI
GRCm38	1	127,729,413 - 127,767,564 (+)	ENTREZGENE
MGSCv37	1	129,625,990 - 129,664,141 (+)	RGD
Celera	1	130,370,820 - 130,409,013 (+)	RGD
cM Map	1		ENTREZGENE

Sequence:

show sequence

ATTTTCACGCTGATCTCTCCATATCAGAATTTCCCTTTTTGTATGTACACGTGTCTCCTCTGGT
CCTGTGGAGATGAAAATTGACATCCACACTCATATTCTACCAAAGGAATGGCCCGATCTAGAAA
AGAGGTTTGGCTATGGAGGCTGGGTGCAGCTCCAACAGCAAGGCAAGGGAGAAGCAAAGATGAT
AAAAGATGGGAAGCTCTTCAGAGTGATCCAACAGAACTGCTGGGACCCAGAAGTTCGTATCAGA
GAAATGAACCAGAAAGGAGTGACAGTCCAAGCTCTTTCCACAGTTCCTGTCATGTTTAGCTACT
GGGCCAAACCTAAGGATACTTTGGAGCTGTGCCAGTTTTTAAACAATGACCTAGCTGCCACCGT
TGCCAGATACCCTCGAAGGTTTGTGGGTTTGGGGACGTTGCCTATGCAAGCCCCGGAGCTGGCC
GTCGAGGAGATGGAGCGTTGTGTTAAGGCGCTAGGATTTCCAGGAATCCAGATTGGCTCCCACA
TCAACACATGGGACCTGAATGACCCGGAACTCTTCCCAATCTATGCTGCGGCCGAGAGGCTGAA
CTGTTCTCTGTTCGTGCATCCCTGGGATATGCAGATGGATGGACGAATGGCCAAATACTGGCTG
CCTTGGCTCGTAGGAATGCCATCGGAGACCACCATGGCCATTTGCTCCATGATCATGGGTGGGG
TGTTTGAGAAGTTTCCCAAACTCAAAGTGTGCTTCGCACACGGAGGTGGTGCTTTCCCCTTCAC
CATAGGAAGAATTGCCCATGGATTCAACATGCGCCCAGATCTCTGTGCCCAGGACAATCCGTCT
GACCCCAGAAAATACCTTGGCTCCTTCTACACAGACTCCCTGGTTCACGATCCTCTGTCTCTCA
AGCTATTGACAGATGTCATAGGAAAGGATAAAGTCATGCTGGGAACTGATTACCCCTTTCCTCT
GGGCGAGCAGGAGCCTGGGAAGCTGATAGAGTCCATGGCAGAGTTTGATGAAGAAACAAAGGAT
AAACTTACAGCTGGCAATGCCTTGGCTTTTTTGGGTCTTGAGAGAAAACTATTTGAATGACAGA
ATTAAGCACACACAAAAAAACTTTCGAGAAGCTACGTCACTTCTGTTTTTGAACATGAGCTATA
CACACATCTATTTTGAATTATGTTACCCCAAAAATGGAATATCCCCCTCAGGATGAAGCAAGAG
GATCAGCAATTCAAGTTCCAGACCAGTCTGGGCTACTTGAGACTGTCTAAAACAAGGGTGGGGG
TAATATTTTCAATATTCTAACTTATTAATAACAAAATGTTTTATAAGGTCTTTATTCTGAAATG
TAATATTCTGAGAAGTGTATATTACTACATAGCAAATCAAAACCATTTGATTTGAAAGAGATAA
AAAATTAATATATAATTAATGATTTAAATAGAAAAATCCAATACCAGCTTTATTCTAGAAGGCT
CGGGGTCTCTATGTTGACTGAAGATATGGGAAATGTACCCAAATAATAAGGTTTTTTCCAGTTG
TAACCCTTTCTGCTAGCCTAGTCATTCAATGGGAATGTTTTTATCTTTGTAAAGTACACATAGG
CTATGCACAAGCTCAAATGTTCTAAAAGCCAGTTAAGAAAGCAAGGTAAATGCTTATGGAATAA
ATGCTGACCCAACACAAAATGGTTTTGATTTGCATATGTAGTAATGTACTACAAACTCATTTTA
GCCTCCCACAGTTGGATAGATCTTAGAATTTGACCTGAGTCTGGAAGGATGGATGAACATTTCT
TTAAAAAGTAAAAAGATGTTGGTCGGGCATCACGGTACATGCCTCTTACATCAGCACTCAGGAG
GCAGAGACAGGCAATGGGTCTGTGTTTGAGGCCAGCTTGGTCTGCATAGCAAGCTCTAGGATAG
CCAGCCAGTGATACACAGTGAAACCTTGCCTCAAAAAGAAATAGGTAGGCTTGGAGAGATGGCT
CAGCAATTAAGAACACTGATTGCTCTTCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGG
TGGCTCACAACCATTTGTAATGGGATCTGATGTCCTCTTCTGGTGTCACTGAAGAAAGTGACAG
TGTACTCACATACATAAAATAAATAATGTTTCTTTTAAAAAATAAATATGTAAACAGAAGATGG
GAGCTGGACCAGAAGAGAAGAAGTTTGAAACCACAGGTGTGACTTAAGAGCGGATGAAACTTTT
CTAAAAGGAATGTCATCTATACGTTTCCCTTTAGCAGAGCAGGAGGCAGAGTTAACTCTGGGG

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Protein Sequences


Protein RefSeqs	NP_001028213	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAI39282	(Get FASTA)	NCBI Sequence Viewer
	BAB86939	(Get FASTA)	NCBI Sequence Viewer
	BAE25634	(Get FASTA)	NCBI Sequence Viewer
	BAE38088	(Get FASTA)	NCBI Sequence Viewer
	EDL39765	(Get FASTA)	NCBI Sequence Viewer
	Q8R519	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_001028213 ⟸ NM_001033041

- UniProtKB:

Q8R519 (UniProtKB/Swiss-Prot)

- Sequence:

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MKIDIHTHILPKEWPDLEKRFGYGGWVQLQQQGKGEAKMIKDGKLFRVIQQNCWDPEVRIREMN
QKGVTVQALSTVPVMFSYWAKPKDTLELCQFLNNDLAATVARYPRRFVGLGTLPMQAPELAVEE
MERCVKALGFPGIQIGSHINTWDLNDPELFPIYAAAERLNCSLFVHPWDMQMDGRMAKYWLPWL
VGMPSETTMAICSMIMGGVFEKFPKLKVCFAHGGGAFPFTIGRIAHGFNMRPDLCAQDNPSDPR
KYLGSFYTDSLVHDPLSLKLLTDVIGKDKVMLGTDYPFPLGEQEPGKLIESMAEFDEETKDKLT
AGNALAFLGLERKLFE

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RefSeq Acc Id:

ENSMUSP00000048482 ⟸ ENSMUST00000038006

Protein Domains

Amidohydro-rel

Promoters

RGD ID:

6874780

Promoter ID:

EPDNEW_M841

Type:

multiple initiation site

Name:

Acmsd_1

Description:

Mus musculus amino carboxymuconate semialdehyde decarboxylase, mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	1	127,729,412 - 127,729,472	EPDNEW

RGD ID:

6817255

Promoter ID:

MM_KWN:1958

Type:

Non-CpG

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

Kidney, Liver

Transcripts:

NM_001033041

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	1	129,625,679 - 129,626,179 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:2386323	AgrOrtholog
Ensembl Genes	ENSMUSG00000026348	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Protein	ENSMUSP00000048482	ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript	ENSMUST00000038006	ENTREZGENE, UniProtKB/Swiss-Prot
InterPro	ACMSD	UniProtKB/TrEMBL, UniProtKB/Swiss-Prot
	Amidohydro-rel	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Metal_Hydrolase	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:266645	UniProtKB/Swiss-Prot
MGD	MGI:2386323	ENTREZGENE
NCBI Gene	266645	ENTREZGENE
PANTHER	PTHR21240	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	Amidohydro_2	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Acmsd	PhenoGen
Superfamily-SCOP	SSF51556	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	ACMSD_MOUSE	UniProtKB/Swiss-Prot
	Q3TNK0_MOUSE	UniProtKB/TrEMBL
	Q8R519	ENTREZGENE
UniProt Secondary	B9EI97	UniProtKB/Swiss-Prot
	Q3UNW3	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

RGD Manual Annotations

Imported Annotations - SMPDB

Imported Annotations - KEGG (archival)