Mmp24 (matrix metallopeptidase 24) - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Gene: Mmp24 (matrix metallopeptidase 24) Mus musculus
Analyze
Symbol: Mmp24
Name: matrix metallopeptidase 24
RGD ID: 732593
MGI Page MGI
Description: Enables cadherin binding activity and metalloendopeptidase activity. Involved in several processes, including cell-cell adhesion mediated by cadherin; detection of temperature stimulus involved in sensory perception of pain; and neuronal stem cell population maintenance. Located in plasma membrane and trans-Golgi network membrane. Is expressed in several structures, including eye; nervous system; and testis. Orthologous to human MMP24 (matrix metallopeptidase 24).
Type: protein-coding
RefSeq Status: REVIEWED
Previously known as: AU040325; matrix metalloproteinase 24; matrix metalloproteinase-21; matrix metalloproteinase-24; membrane type 5-MMP; membrane-type matrix metalloproteinase 5; membrane-type-5 matrix metalloproteinase; MMP-21; MMP-24; MT-MMP 5; MT5-MM; MT5-MMP; MT5MMP; MTMMP5
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,617,262 - 155,660,286 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,617,262 - 155,660,286 (+)EnsemblGRCm39 Ensembl
GRCm382155,775,342 - 155,818,367 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2155,775,342 - 155,818,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv372155,601,080 - 155,644,102 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362155,466,840 - 155,509,807 (+)NCBIMGSCv36mm8
Celera2161,724,940 - 161,750,893 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. ClinVar Automated Import and Annotation Pipeline RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
5. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:10085137   PMID:10349636   PMID:10471807   PMID:10622708   PMID:10640822   PMID:10725249   PMID:10949577   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11714638   PMID:12466851  
PMID:14741353   PMID:14990567   PMID:15734845   PMID:15782199   PMID:16495457   PMID:16602821   PMID:17114464   PMID:18799693   PMID:19805319   PMID:21267068   PMID:21873635   PMID:23421805  
PMID:24718611   PMID:24952463   PMID:25794647   PMID:26202697   PMID:26322584   PMID:28119565   PMID:29196321   PMID:34321999  


Genomics

Comparative Map Data
Mmp24
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392155,617,262 - 155,660,286 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2155,617,262 - 155,660,286 (+)EnsemblGRCm39 Ensembl
GRCm382155,775,342 - 155,818,367 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2155,775,342 - 155,818,366 (+)EnsemblGRCm38mm10GRCm38
MGSCv372155,601,080 - 155,644,102 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362155,466,840 - 155,509,807 (+)NCBIMGSCv36mm8
Celera2161,724,940 - 161,750,893 (+)NCBICelera
Cytogenetic Map2H1NCBI
cM Map277.26NCBI
MMP24
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382035,226,690 - 35,276,998 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2035,226,690 - 35,276,998 (+)EnsemblGRCh38hg38GRCh38
GRCh372033,814,493 - 33,864,801 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 362033,278,106 - 33,328,218 (+)NCBINCBI36Build 36hg18NCBI36
Build 342033,278,107 - 33,326,511NCBI
Celera2030,583,249 - 30,613,409 (+)NCBICelera
Cytogenetic Map20q11.22NCBI
HuRef2030,592,010 - 30,642,227 (+)NCBIHuRef
CHM1_12033,715,680 - 33,765,882 (+)NCBICHM1_1
T2T-CHM13v2.02036,947,464 - 36,997,860 (+)NCBIT2T-CHM13v2.0
Mmp24
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83164,739,226 - 164,783,696 (+)NCBIGRCr8
mRatBN7.23144,279,096 - 144,323,572 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3144,279,096 - 144,323,572 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3148,145,188 - 148,188,968 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03156,762,468 - 156,806,235 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03154,501,979 - 154,545,755 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03151,307,309 - 151,355,401 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3151,310,598 - 151,355,401 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03157,676,152 - 157,720,612 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera3143,019,816 - 143,047,813 (+)NCBICelera
Cytogenetic Map3q42NCBI
Mmp24
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495542226,126,929 - 26,154,285 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495542226,128,403 - 26,154,285 (-)NCBIChiLan1.0ChiLan1.0
MMP24
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22140,959,852 - 41,010,276 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12040,952,956 - 41,004,532 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02031,554,770 - 31,606,348 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12032,686,887 - 32,729,403 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2032,686,887 - 32,729,403 (+)Ensemblpanpan1.1panPan2
MMP24
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12424,223,049 - 24,258,082 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2424,232,833 - 24,255,725 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2423,861,305 - 23,903,980 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02424,907,564 - 24,950,248 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2424,907,564 - 24,949,757 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12424,194,434 - 24,237,113 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02424,276,885 - 24,332,128 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02424,728,551 - 24,771,226 (+)NCBIUU_Cfam_GSD_1.0
Mmp24
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024408640173,248,000 - 173,270,439 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365615,478,145 - 5,502,529 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365615,479,107 - 5,501,559 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MMP24
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1738,588,081 - 38,636,627 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11738,587,230 - 38,636,628 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
MMP24
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1256,153,277 - 56,183,026 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl256,152,944 - 56,184,605 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660872,304,079 - 2,334,298 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mmp24
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248424,131,523 - 4,160,134 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248424,133,323 - 4,159,501 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mmp24
1252 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:1412
Count of miRNA genes:603
Interacting mature miRNAs:782
Transcripts:ENSMUST00000029141, ENSMUST00000135945
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
5491197Mobq5_mmultigenic obesity QTL 5 (mouse)Not determined265269746162518926Mouse
5491196Mobq6_mmultigenic obesity QTL 6 (mouse)Not determined285724269180896594Mouse
27226788Feml13_mfemur length 13, 10 week (mouse)2102630345159941920Mouse
11038702Ltpr2_mLeishmania tropica response 2 (mouse)2103095716167212356Mouse
1301618Bglu1_mblood glucose level 1 (mouse)Not determined2117942930174324863Mouse
12910795Pwbwq5_mpost-weaning body weight QTL 5 (mouse)2118589253160611165Mouse
12910799Pwgrq2_mpre-weaning growth rate QTL 2 (mouse)2118589253160611165Mouse
12910812Pwgrq1_mpre-weaning growth rate QTL 1 (mouse)2118589253160611165Mouse
12910814Pwbwq1_mpre-weaning body weight QTL 1 (mouse)2118589253160611165Mouse
1301294Hrtfm5_mheart failure modifier 5 (mouse)Not determined2122883015156883131Mouse
1301822Pgia2_mproteoglycan induced arthritis 2 (mouse)Not determined2123937311157937424Mouse
27226749Femd10_mfemur midshaft diameter 10, 16 week (mouse)2124441920168241920Mouse
1302143Bwq5_mbody weight (mouse)Not determined2127664019161664118Mouse
1301031Bdln3_mbody length 3 (mouse)Not determined2127664019161664118Mouse
12880427V25Dq3_mvitamin D inactive form serum level QTL 3 (mouse)2129341920163341920Mouse
1301961Bts1_mbladder tumor susceptibility 1 (mouse)Not determined2132024159166024330Mouse
11049567Lmr28f_mleishmaniasis resistance 28f (mouse)2133144911167145058Mouse
11049566Lmr28e_mleishmaniasis resistance 28e (mouse)2133144911167145058Mouse
11341717Rvfs1_mRift Valley fever susceptibility 1 (mouse)2135432544173449616Mouse
4141703Chlq13_mcirculating hormone level QTL 13 (mouse)Not determined2135699221169699361Mouse
1301907Rends_mrenal disease susceptibility (mouse)Not determined2135699221169699361Mouse
10043956Gnf5_mgrowth and fatness 5 (mouse)Not determined2135699221169699361Mouse
10054066Bwq9_mbody weight QTL 9 (mouse)Not determined2135699221169699361Mouse
1300846Pbwg11_mpostnatal body weight growth 11 (mouse)Not determined2138966600172966729Mouse
11353826Bdln10_mbody length 10 (mouse)2140441482174441482Mouse
12801461Intim1_mintima modifier 1 (mouse)2142428347176428450Mouse
12801456Intmrm1_mintima/media ratio modifier 1 (mouse)2142428347176428450Mouse
1301783Bhr1_mbronchial hyperresponsiveness 1 (mouse)Not determined2142593476178442452Mouse
4141033Wg2d_mweight gain in high growth mice 2d (mouse)Not determined143773445160303008Mouse
1357484Bsbob_mBSB obesity (mouse)Not determined2143773445165665019Mouse
1558939Gnf1_mgrowth and fatness 1 (mouse)Not determined2143773445169117924Mouse
1300867Lore2_mloss of righting induced by ethanol 2 (mouse)Not determined2144515861180896594Mouse
1302013Tbbmd3_mtotal body bone mineral density 3 (mouse)Not determined2145196949179197085Mouse
1300806Aod4_mautoimmune ovarian dysgenesis 4 (mouse)Not determined2145228719179228841Mouse
1301865Hdlq19_mHDL QTL 19 (mouse)Not determined2145518775179518926Mouse
13504830Bacsq1_mbaculum shape QTL 1 (mouse)2145716184161016184Mouse
12790983Bwq12_mbody weight QTL 12 (mouse)2148238204181755017Mouse
4142211Nilac3_mnicotine induced locomotor activity 3 (mouse)Not determined2148664893181755017Mouse
1558917Gct8_mgranulosa cell tumorigenesis 8 (mouse)Not determined2149236907181755017Mouse
1300751Bdt1_mbone density traits 1 (mouse)Not determined2149988902181755017Mouse
1301085Lrnx10_mlearning-contextual 10 (mouse)Not determined2150212221181755017Mouse
11038701Ltpr2e_mLeishmania tropica response 2e (mouse)2150212221181755017Mouse
4142450Lmr16_mleishmaniasis resistance 16 (mouse)Not determined2150212221181755017Mouse
1357862Epfq1_mepididymal fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1357772Scfq1_msubcutaneous fat pad weight QTL 1 (mouse)Not determined2151640941162737074Mouse
1558842Tailq2_mtail length QTL 2 (mouse)Not determined2151640941162737074Mouse
10412080Hylaq2_mHyperlocomotor activity related QTL 2 (mouse)Not determined2151640941164119146Mouse
12910520Scgq3_mspontaneous crescentic glomerulonephritis QTL 3 (mouse)2151709273174389124Mouse
1301019Bmd6_mbone mineral density 6 (mouse)Not determined2151778297181755017Mouse
13825247Agoc2_magouti coat color QTL 2 (mouse)2151841920159841920Mouse
14747002Mancz3_mmandible centroid size 3 (mouse)2152329820181755017Mouse
1558852Gnf2_mgrowth and fatness 2 (mouse)Not determined2152699221162197085Mouse
1558867Gnf3_mgrowth and fatness 3 (mouse)Not determined2152699221169117924Mouse
13524521Bodwtq2_mbody wweight QTL 2 (mouse)2153456184156386184Mouse
1301588Hrec_mhemotopoietic response to early cytokines (mouse)Not determined2154553217159428450Mouse

Markers in Region
BB176314  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382155,814,665 - 155,814,766UniSTSGRCm38
MGSCv372155,640,401 - 155,640,502UniSTSGRCm37
Celera2161,747,192 - 161,747,293UniSTS
Cytogenetic Map2H1UniSTS
cM Map287.5UniSTS
Whitehead/MRC_RH21816.77UniSTS
AU040325  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382155,817,790 - 155,817,908UniSTSGRCm38
MGSCv372155,643,526 - 155,643,644UniSTSGRCm37
Celera2161,750,317 - 161,750,435UniSTS
Cytogenetic Map2H1UniSTS
cM Map287.5UniSTS
Whitehead/MRC_RH21820.13UniSTS
Mmp24  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic Map2H1UniSTS
cM Map287.5UniSTS
RH135475  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382155,813,987 - 155,814,161UniSTSGRCm38
MGSCv372155,639,723 - 155,639,897UniSTSGRCm37
Celera2161,746,514 - 161,746,688UniSTS
Cytogenetic Map2H1UniSTS
cM Map287.5UniSTS
REN57077  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm382155,816,426 - 155,816,671UniSTSGRCm38
MGSCv372155,642,162 - 155,642,407UniSTSGRCm37
Celera2161,748,953 - 161,749,198UniSTS
Cytogenetic Map2H1UniSTS
cM Map287.5UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_010808 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030248212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB021226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AJ010262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK185262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK216371 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL929233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AY622976 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM947491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BM950641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BQ745403 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CA320413 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD348827 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD352405 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CD355182 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CF540062 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466551 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000029141   ⟹   ENSMUSP00000029141
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2155,617,262 - 155,660,286 (+)Ensembl
GRCm38.p6 Ensembl2155,775,342 - 155,818,366 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135945
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl2155,648,944 - 155,652,299 (+)Ensembl
GRCm38.p6 Ensembl2155,807,024 - 155,810,379 (+)Ensembl
RefSeq Acc Id: NM_010808   ⟹   NP_034938
RefSeq Status: REVIEWED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392155,617,262 - 155,660,286 (+)NCBI
GRCm382155,775,342 - 155,818,366 (+)NCBI
MGSCv372155,601,080 - 155,644,102 (+)RGD
Celera2161,724,940 - 161,750,893 (+)RGD
cM Map2 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030248212   ⟹   XP_030104072
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm392155,617,265 - 155,660,282 (+)NCBI
GRCm382155,775,345 - 155,818,367 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_034938 (Get FASTA)   NCBI Sequence Viewer  
  XP_030104072 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAT46407 (Get FASTA)   NCBI Sequence Viewer  
  BAA82966 (Get FASTA)   NCBI Sequence Viewer  
  CAA09055 (Get FASTA)   NCBI Sequence Viewer  
  EDL06144 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000029141
  ENSMUSP00000029141.6
GenBank Protein Q9R0S2 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034938   ⟸   NM_010808
- Peptide Label: preproprotein
- UniProtKB: A2AUV7 (UniProtKB/Swiss-Prot),   Q9Z0J9 (UniProtKB/Swiss-Prot),   Q9R0S2 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_030104072   ⟸   XM_030248212
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000029141   ⟸   ENSMUST00000029141
Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9R0S2-F1-model_v2 AlphaFold Q9R0S2 1-618 view protein structure

Promoters
RGD ID:6831844
Promoter ID:MM_KWN:32566
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000038557
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv362155,632,001 - 155,632,501 (+)MPROMDB
RGD ID:6879370
Promoter ID:EPDNEW_M3136
Type:initiation region
Name:Mmp24_1
Description:Mus musculus matrix metallopeptidase 24 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm382155,775,351 - 155,775,411EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:1341867 AgrOrtholog
Ensembl Genes ENSMUSG00000027612 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000029141 ENTREZGENE
  ENSMUST00000029141.6 UniProtKB/Swiss-Prot
Gene3D-CATH 2.110.10.10 UniProtKB/Swiss-Prot
  3.40.390.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Hemopexin-like_dom UniProtKB/Swiss-Prot
  Hemopexin-like_dom_sf UniProtKB/Swiss-Prot
  Hemopexin-like_repeat UniProtKB/Swiss-Prot
  Hemopexin_CS UniProtKB/Swiss-Prot
  M10A_MMP UniProtKB/Swiss-Prot
  MetalloPept_cat_dom_sf UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pept_M10_metallopeptidase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pept_M10A UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Pept_M10A_metallopeptidase_C UniProtKB/Swiss-Prot
  Peptidase_Metallo UniProtKB/Swiss-Prot
  Peptidoglycan-bd-like UniProtKB/Swiss-Prot
  PGBD-like_sf UniProtKB/Swiss-Prot
KEGG Report mmu:17391 UniProtKB/Swiss-Prot
MGD MGI:1341867 ENTREZGENE
NCBI Gene 17391 ENTREZGENE
PANTHER MATRIX METALLOPROTEINASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR10201:SF138 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam DUF3377 UniProtKB/Swiss-Prot
  Hemopexin UniProtKB/Swiss-Prot
  Peptidase_M10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PG_binding_1 UniProtKB/Swiss-Prot
PhenoGen Mmp24 PhenoGen
PIRSF Peptidase_M10A_matrix UniProtKB/Swiss-Prot
PRINTS MATRIXIN UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PROSITE HEMOPEXIN UniProtKB/Swiss-Prot
  HEMOPEXIN_2 UniProtKB/Swiss-Prot
  ZINC_PROTEASE UniProtKB/Swiss-Prot
SMART SM00120 UniProtKB/Swiss-Prot
  ZnMc UniProtKB/Swiss-Prot
Superfamily-SCOP Metalloproteases ('zincins'), catalytic domain UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  SSF47090 UniProtKB/Swiss-Prot
  SSF50923 UniProtKB/Swiss-Prot
UniProt A2AUV7 ENTREZGENE
  MMP24_MOUSE UniProtKB/Swiss-Prot
  Q6GX95_MOUSE UniProtKB/TrEMBL
  Q9R0S2 ENTREZGENE
  Q9Z0J9 ENTREZGENE
UniProt Secondary A2AUV7 UniProtKB/Swiss-Prot
  Q9Z0J9 UniProtKB/Swiss-Prot