Submit Data |  Help |  Video Tutorials |  News |  Publications |  FTP Download |  REST API |  Citing RGD |  Contact   
Gene: Ptbp3 (polypyrimidine tract binding protein 3) Mus musculus
Analyze
Symbol: Ptbp3
Name: polypyrimidine tract binding protein 3
Description: Predicted to have mRNA binding activity. Involved in negative regulation of mRNA splicing, via spliceosome. Predicted to localize to nucleus. Is expressed in several structures, including central nervous system; liver; metanephros; sensory organ; and thymus primordium. Orthologous to human PTBP3 (polypyrimidine tract binding protein 3); INTERACTS WITH 1,1-dichloroethene; 17alpha-ethynylestradiol; 2,2',4,4',5,5'-hexachlorobiphenyl.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 5830471K22Rik; AA407443; AI462022; AW107884; C86549; MGC11742; polypyrimidine tract-binding protein 3; regulator of differentiation 1; Rod1; ROD1 regulator of differentiation 1
Orthologs:
Homo sapiens (human) : PTBP3 (polypyrimidine tract binding protein 3)  HGNC  Alliance
Rattus norvegicus (Norway rat) : Ptbp3 (polypyrimidine tract binding protein 3)  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Ptbp3 (polypyrimidine tract binding protein 3)
Pan paniscus (bonobo/pygmy chimpanzee) : PTBP3 (polypyrimidine tract binding protein 3)
Canis lupus familiaris (dog) : PTBP3 (polypyrimidine tract binding protein 3)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Ptbp3 (polypyrimidine tract binding protein 3)
Sus scrofa (pig) : PTBP3 (polypyrimidine tract binding protein 3)
Chlorocebus sabaeus (African green monkey) : PTBP3 (polypyrimidine tract binding protein 3)
Heterocephalus glaber (naked mole-rat) : Ptbp3 (polypyrimidine tract binding protein 3)
more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm38.p6 Ensembl459,471,868 - 59,549,364 (-)EnsemblGRCm38mm10GRCm38
GRCm38459,471,868 - 59,549,378 (-)NCBIGRCm38GRCm38mm10GRCm38
MGSCv37459,484,740 - 59,562,236 (-)NCBIGRCm37mm9NCBIm37
MGSCv36459,569,120 - 59,643,340 (-)NCBImm8
Celera459,388,969 - 59,466,480 (-)NCBICelera
Cytogenetic Map4B3NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations
Gene Ontology Annotations
References - curated
References - uncurated

Genomics

Comparative Map Data
Position Markers
QTLs in Region (GRCm38)
miRNA Target Status

Expression


Sequence

Nucleotide Sequences
Protein Sequences
Promoters

Additional Information

External Database Links
Nomenclature History
 
More on Ptbp3
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: mm9 mm10
MGI Report
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 732345
Created: 2004-01-12
Species: Mus musculus
Last Modified: 2020-06-30
Status: ACTIVE



NHLBI Logo

RGD is funded by grant HL64541 from the National Heart, Lung, and Blood Institute on behalf of the NIH.