Alas2 (aminolevulinic acid synthase 2, erythroid) - Rat Genome Database
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Gene: Alas2 (aminolevulinic acid synthase 2, erythroid) Mus musculus
Analyze
Symbol: Alas2
Name: aminolevulinic acid synthase 2, erythroid
RGD ID: 732282
MGI Page MGI
Description: Is expressed in several structures, including alimentary system; brain; genitourinary system; hemolymphoid system gland; and liver and biliary system. Human ortholog(s) of this gene implicated in cutaneous porphyria; erythropoietic protoporphyria; hemochromatosis; sideroblastic anemia; and sideroblastic anemia 1. Orthologous to human ALAS2 (5'-aminolevulinate synthase 2); PARTICIPATES IN heme biosynthetic pathway; glycine, serine and threonine metabolic pathway; porphyrin and chlorophyll metabolic pathway; INTERACTS WITH 1,2-dichloroethane; 17alpha-ethynylestradiol; 17beta-estradiol.
Type: protein-coding
RefSeq Status: VALIDATED
Also known as: 5-aminolevulinate synthase, erythroid-specific, mitochondrial; 5-aminolevulinic acid synthase 2; A; Al; ALAS; Alas-2; ALAS-E; ALASE; delta-ALA synthase 2; delta-aminolevulinate synthase 2; erythroid-specific ALAS
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm38 - Mouse Genome Assembly GRCm38
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X149,330,413 - 149,353,618 (+)NCBIGRCm39mm39
GRCm39 EnsemblX149,330,371 - 149,353,634 (+)Ensembl
GRCm38X150,547,417 - 150,570,622 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX150,547,375 - 150,570,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X146,981,960 - 147,005,165 (+)NCBIGRCm37mm9NCBIm37
MGSCv36X145,888,161 - 145,911,335 (+)NCBImm8
CeleraX133,836,224 - 133,858,249 (-)NCBICelera
Cytogenetic MapXF3NCBI
cM MapX68.46NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
1,2-dichloroethane  (EXP)
17alpha-ethynylestradiol  (EXP)
17beta-estradiol  (EXP)
2,2',4,4',5,5'-hexachlorobiphenyl  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,6-dinitrotoluene  (ISO)
3,3',4,4',5-pentachlorobiphenyl  (ISO)
3H-1,2-dithiole-3-thione  (EXP,ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (ISO)
acetamide  (ISO)
aflatoxin B1  (ISO)
amiodarone  (EXP)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
astemizole  (ISO)
benzene  (EXP,ISO)
benzo[a]pyrene  (EXP,ISO)
benzo[b]fluoranthene  (EXP)
beta-naphthoflavone  (ISO)
bisphenol A  (EXP,ISO)
cadmium dichloride  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
carbonyl sulfide  (ISO)
carboplatin  (ISO)
carmustine  (ISO)
catechol  (ISO)
chloroprene  (ISO)
cisplatin  (ISO)
clofibrate  (EXP)
copper atom  (EXP,ISO)
copper(0)  (EXP,ISO)
crocidolite asbestos  (EXP)
diarsenic trioxide  (ISO)
dibutyl phthalate  (EXP)
dichloroacetic acid  (EXP)
diclofenac  (ISO)
dimethyl sulfoxide  (EXP)
dioxygen  (EXP)
doxorubicin  (EXP,ISO)
ethanol  (EXP)
ferroheme b  (EXP)
gentamycin  (ISO)
heme b  (EXP)
hemin  (ISO)
hexachlorobenzene  (ISO)
indole-3-methanol  (ISO)
irinotecan  (ISO)
iron atom  (EXP)
iron(0)  (EXP)
lead diacetate  (ISO)
linalool  (ISO)
linezolid  (ISO)
maneb  (EXP)
metformin  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
ozone  (EXP)
paracetamol  (EXP,ISO)
paraquat  (EXP)
phenacetin  (ISO)
phenformin  (ISO)
phenol  (ISO)
phenylhydrazine  (ISO)
pirinixic acid  (EXP,ISO)
potassium dichromate  (EXP)
progesterone  (EXP)
raloxifene  (ISO)
rotenone  (ISO)
S-adenosyl-L-homocysteine  (ISO)
S-adenosyl-L-methioninate  (ISO)
S-adenosyl-L-methionine  (ISO)
sodium arsenate  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (EXP)
testosterone  (EXP)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
tioguanine  (ISO)
trichloroethene  (ISO)
triphenyl phosphate  (ISO)
tungsten  (EXP)
valproic acid  (EXP,ISO)
vinclozolin  (ISO)

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
References

References - curated
1. Ajioka RS, etal., Biochim Biophys Acta. 2006 Jul;1763(7):723-36. Epub 2006 Jun 3.
2. Barupala DP, etal., Arch Biochem Biophys. 2016 Feb 15;592:60-75. doi: 10.1016/j.abb.2016.01.010. Epub 2016 Jan 16.
3. Cazzola M, etal., Blood. 2000 Dec 15;96(13):4363-5.
4. Cotter PD, etal., Blood. 1994 Dec 1;84(11):3915-24.
5. Cotter PD, etal., J Clin Invest. 1995 Oct;96(4):2090-6.
6. Dhar SK, etal., Res Commun Chem Pathol Pharmacol. 1993 Jun;80(3):329-36.
7. Ducamp S, etal., Hum Mol Genet. 2013 Apr 1;22(7):1280-8. doi: 10.1093/hmg/dds531. Epub 2012 Dec 20.
8. GenMAPP
9. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
10. KEGG
11. Kucerova J, etal., Acta Haematol. 2011;125(4):193-7. doi: 10.1159/000322870. Epub 2011 Jan 20.
12. Larion S, etal., Eur J Clin Invest. 2013 Jul;43(7):727-39. doi: 10.1111/eci.12102. Epub 2013 May 8.
13. Lee PL, etal., Blood Cells Mol Dis. 2006 Mar-Apr;36(2):292-7. Epub 2006 Jan 30.
14. MGD and Homologene mouse data transfer
15. MGD data from the GO Consortium
16. MGD IEA
17. Neidhardt L, etal., Mech Dev 2000 Nov;98(1-2):77-94.
18. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
19. OMIM Disease Annotation Pipeline
20. Pipeline to import KEGG annotations from KEGG into RGD
21. RGD automated import pipeline
22. RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
23. RGD automated import pipeline for gene-chemical interactions
24. Rokushima M, etal., Toxicol Sci. 2006 Nov 2;.
25. To-Figueras J, etal., Blood. 2011 Aug 11;118(6):1443-51. doi: 10.1182/blood-2011-03-342873. Epub 2011 Jun 7.
26. Uehara T, etal., Toxicology. 2011 Apr 11;282(3):139-45. doi: 10.1016/j.tox.2011.01.027. Epub 2011 Feb 4.
27. Whatley SD, etal., Am J Hum Genet. 2008 Sep;83(3):408-14. doi: 10.1016/j.ajhg.2008.08.003. Epub 2008 Sep 4.
Additional References at PubMed
PMID:2780318   PMID:3557128   PMID:7620186   PMID:7757076   PMID:7873890   PMID:8268805   PMID:8535076   PMID:8661129   PMID:8688429   PMID:8833143   PMID:9446639   PMID:10349636  
PMID:10562540   PMID:10773455   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11566198   PMID:12191993   PMID:12393610   PMID:12393745   PMID:12477932   PMID:12573260   PMID:14651853  
PMID:14681479   PMID:15914564   PMID:15923635   PMID:16141072   PMID:16141073   PMID:16356476   PMID:16602821   PMID:16716198   PMID:16787915   PMID:17300687   PMID:17374603   PMID:17476283  
PMID:18094026   PMID:18614015   PMID:18780836   PMID:19210546   PMID:19386262   PMID:19917609   PMID:20347762   PMID:20508144   PMID:20554972   PMID:20647008   PMID:20696915   PMID:21267068  
PMID:21862448   PMID:21873635   PMID:22260730   PMID:22556427   PMID:24509859   PMID:24718052   PMID:24920668   PMID:25240868   PMID:26287972   PMID:26511319   PMID:26527618   PMID:26854603  
PMID:27928941   PMID:28123038   PMID:29866044   PMID:29958424   PMID:31813828  


Genomics

Comparative Map Data
Alas2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39X149,330,413 - 149,353,618 (+)NCBIGRCm39mm39
GRCm39 EnsemblX149,330,371 - 149,353,634 (+)Ensembl
GRCm38X150,547,417 - 150,570,622 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 EnsemblX150,547,375 - 150,570,638 (+)EnsemblGRCm38mm10GRCm38
MGSCv37X146,981,960 - 147,005,165 (+)NCBIGRCm37mm9NCBIm37
MGSCv36X145,888,161 - 145,911,335 (+)NCBImm8
CeleraX133,836,224 - 133,858,249 (-)NCBICelera
Cytogenetic MapXF3NCBI
cM MapX68.46NCBI
ALAS2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38.p13 EnsemblX55,009,055 - 55,030,977 (-)EnsemblGRCh38hg38GRCh38
GRCh38X55,009,055 - 55,030,977 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh37X55,035,488 - 55,057,410 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36X55,052,213 - 55,074,136 (-)NCBINCBI36hg18NCBI36
Build 34X54,918,512 - 54,940,432NCBI
CeleraX58,870,631 - 58,892,640 (-)NCBI
Cytogenetic MapXp11.21NCBI
HuRefX52,086,432 - 52,108,437 (-)NCBIHuRef
CHM1_1X55,025,527 - 55,047,534 (-)NCBICHM1_1
Alas2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2X19,463,146 - 19,486,526 (+)NCBI
Rnor_6.0 EnsemblX23,167,696 - 23,187,341 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_6.0X23,167,576 - 23,187,356 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0X23,587,683 - 23,605,753 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.1X39,853,992 - 39,864,053 (+)NCBI
CeleraX19,742,070 - 19,760,615 (+)NCBICelera
Cytogenetic MapXq13NCBI
Alas2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554752,362,118 - 2,377,864 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554752,362,368 - 2,382,680 (-)NCBIChiLan1.0ChiLan1.0
ALAS2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1X55,451,669 - 55,468,601 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 EnsemblX55,451,794 - 55,473,680 (-)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0X47,219,588 - 47,241,592 (-)NCBIMhudiblu_PPA_v0panPan3
ALAS2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1 EnsemblX46,703,477 - 46,723,529 (-)EnsemblCanFam3.1canFam3CanFam3.1
CanFam3.1X46,703,477 - 46,731,767 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Alas2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
SpeTri2.0NW_0049367511,818,255 - 1,841,028 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ALAS2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 EnsemblX47,871,521 - 47,896,003 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1X47,871,519 - 47,896,041 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2X53,807,663 - 53,832,189 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ALAS2
(Chlorocebus sabaeus - African green monkey)
Vervet AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1X51,086,062 - 51,108,564 (-)NCBI
ChlSab1.1 EnsemblX51,086,066 - 51,103,505 (-)Ensembl
Alas2
(Heterocephalus glaber - naked mole-rat)
Molerat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624910426,273 - 726,778 (-)NCBI

Position Markers
UniSTS:238093  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X150,550,791 - 150,551,021UniSTSGRCm38
MGSCv37X146,985,334 - 146,985,564UniSTSGRCm37
Cytogenetic MapXF3UniSTS
cM MapX63.0UniSTS
M63244  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X150,570,481 - 150,570,567UniSTSGRCm38
MGSCv37X147,005,024 - 147,005,110UniSTSGRCm37
CeleraX133,836,279 - 133,836,365UniSTS
Cytogenetic MapXF3UniSTS
cM MapX63.0UniSTS
Whitehead/MRC_RHX1769.46UniSTS
Alas2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X150,570,375 - 150,570,501UniSTSGRCm38
MGSCv37X147,004,918 - 147,005,044UniSTSGRCm37
CeleraX133,836,345 - 133,836,471UniSTS
Cytogenetic MapXF3UniSTS
cM MapX63.0UniSTS
Alas2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXF3UniSTS
Alas2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
Cytogenetic MapXF3UniSTS
Alas2  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm38X150,553,052 - 150,553,968UniSTSGRCm38
MGSCv37X146,987,595 - 146,988,511UniSTSGRCm37
CeleraX133,852,910 - 133,853,826UniSTS
Cytogenetic MapXF3UniSTS


QTLs in Region (GRCm38)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357433Dbts2_mdiabetes 2 (mouse)Not determinedX7360056151324042Mouse
13208552Wght12_mweight 12 (mouse)X95000000151000000Mouse
13208556Lgth14_mbody length 14 (mouse)X95000000151000000Mouse
1357823Spha3_msperm head anomaly 3 (mouse)Not determinedX103012242163975945Mouse
1301209Cia19_mcollagen induced arthritis 19 (mouse)Not determinedX122083468161430042Mouse
25314309Syncl5_msynaptonemal complex length 5 (mouse)X123000000153800000Mouse
10412164Cmv2_mcytomegalovirus resistance 2 (mouse)Not determinedX126902153160902273Mouse
13824981Svwq2_mseminal vesicle weight QTL 2 (mouse)X130000000155000000Mouse
1558900Bw3_mbody weight QTL 3 (mouse)Not determinedX134639291166515599Mouse
1301276Tswt_mtestis weight (mouse)Not determinedX139475662152006342Mouse
1302000Pgia25_mproteoglycan induced arthritis 2 (mouse)Not determinedX145691384171031299Mouse
10401118Pgia39_mproteoglycan induced arthritis 39 (mouse)Not determinedX145691384171031299Mouse

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:633
Count of miRNA genes:337
Interacting mature miRNAs:363
Transcripts:ENSMUST00000066337, ENSMUST00000112715, ENSMUST00000134670, ENSMUST00000142474
Prediction methods:Miranda, Rnahybrid
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001102446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_009653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030251199 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AB085235 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AF171078 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK002642 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK077610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165257 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK165262 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK172094 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL672150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL808140 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC024575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC150870 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY035435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466641 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M15268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M63244 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000066337   ⟹   ENSMUSP00000066040
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX150,547,375 - 150,570,638 (+)Ensembl
RefSeq Acc Id: ENSMUST00000112715   ⟹   ENSMUSP00000108335
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX150,547,459 - 150,570,622 (+)Ensembl
RefSeq Acc Id: ENSMUST00000134670
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX150,554,037 - 150,557,663 (+)Ensembl
RefSeq Acc Id: ENSMUST00000142474
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38.p6 EnsemblX150,566,390 - 150,570,622 (+)Ensembl
RefSeq Acc Id: NM_001102446   ⟹   NP_001095916
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X149,330,413 - 149,353,618 (+)NCBI
GRCm38X150,547,417 - 150,570,622 (+)ENTREZGENE
MGSCv37X146,981,960 - 147,005,165 (+)RGD
CeleraX133,836,224 - 133,858,249 (-)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: NM_009653   ⟹   NP_033783
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X149,330,413 - 149,353,618 (+)NCBI
GRCm38X150,547,417 - 150,570,622 (+)ENTREZGENE
MGSCv37X146,981,960 - 147,005,165 (+)RGD
CeleraX133,836,224 - 133,858,249 (-)RGD
cM MapX ENTREZGENE
Sequence:
RefSeq Acc Id: XM_030251199   ⟹   XP_030107059
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39X149,330,448 - 149,353,618 (+)NCBI
GRCm38X150,547,452 - 150,570,622 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_033783   ⟸   NM_009653
- Peptide Label: isoform a
- UniProtKB: P08680 (UniProtKB/Swiss-Prot),   A2AFM0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001095916   ⟸   NM_001102446
- Peptide Label: isoform b
- UniProtKB: P08680 (UniProtKB/Swiss-Prot),   A2AFM1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030107059   ⟸   XM_030251199
- Peptide Label: isoform X1
RefSeq Acc Id: ENSMUSP00000066040   ⟸   ENSMUST00000066337
RefSeq Acc Id: ENSMUSP00000108335   ⟸   ENSMUST00000112715
Protein Domains
Aminotran_1_2   Preseq_ALAS

Promoters
RGD ID:6845447
Promoter ID:MM_KWN:62299
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:Brain
Transcripts:OTTMUST00000045895
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X146,988,081 - 146,988,581 (+)MPROMDB
RGD ID:6845448
Promoter ID:MM_KWN:62300
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day4,   MEF_B6
Transcripts:OTTMUST00000045896
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36X147,000,704 - 147,001,204 (+)MPROMDB
RGD ID:13681602
Promoter ID:EPDNEW_M24950
Type:multiple initiation site
Name:Alas2_1
Description:Mus musculus aminolevulinic acid synthase 2, erythroid , transcriptvariant 2, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38X150,547,447 - 150,547,507EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:87990 AgrOrtholog
Ensembl Genes ENSMUSG00000025270 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000066040 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000108335 ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000066337 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000112715 ENTREZGENE, UniProtKB/TrEMBL
Gene3D-CATH 3.40.640.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  3.90.1150.10 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro 4pyrrol_synth_NH2levulA_synth UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  5aminolev_synth_preseq UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aminotrans_II_pyridoxalP_BS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Aminotransferase_I/II UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_dom1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PyrdxlP-dep_Trfase_major UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:11656 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:87990 ENTREZGENE
NCBI Gene 11656 ENTREZGENE
Pfam Aminotran_1_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Preseq_ALAS UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Alas2 PhenoGen
PROSITE AA_TRANSFER_CLASS_2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF53383 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
TIGRFAMs 5aminolev_synth UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt A2AFM0 ENTREZGENE, UniProtKB/TrEMBL
  A2AFM1 ENTREZGENE, UniProtKB/TrEMBL
  HEM0_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q3TA47_MOUSE UniProtKB/TrEMBL
  Q3TNI1_MOUSE UniProtKB/TrEMBL
  Q8R1G3_MOUSE UniProtKB/TrEMBL
UniProt Secondary Q64452 UniProtKB/Swiss-Prot
  Q9DCN0 UniProtKB/Swiss-Prot