Mgat1 (mannoside acetylglucosaminyltransferase 1) - Rat Genome Database

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Gene: Mgat1 (mannoside acetylglucosaminyltransferase 1) Mus musculus
Analyze
Symbol: Mgat1
Name: mannoside acetylglucosaminyltransferase 1
RGD ID: 732273
MGI Page MGI
Description: Enables acetylglucosaminyltransferase activity. Acts upstream of or within UDP-N-acetylglucosamine catabolic process and in utero embryonic development. Predicted to be located in Golgi membrane. Predicted to be active in Golgi apparatus. Is expressed in several structures, including decidua; early conceptus; embryo ectoderm; embryo endoderm; and retina outer nuclear layer. Orthologous to human MGAT1 (alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase; glcNAc-T I; GNT-I; Mgat-; Mgat-1; N-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391149,135,018 - 49,153,854 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1149,135,018 - 49,153,857 (+)EnsemblGRCm39 Ensembl
GRCm381149,244,191 - 49,263,027 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1149,244,191 - 49,263,030 (+)EnsemblGRCm38mm10GRCm38
MGSCv371149,057,693 - 49,076,529 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361149,087,669 - 49,106,450 (+)NCBIMGSCv36mm8
Celera1153,806,759 - 53,825,547 (+)NCBICelera
Cytogenetic Map11B1.2NCBI
cM Map1129.27NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Pathway Annotations     Click to see Annotation Detail View
Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
abnormal corpus luteum morphology  (IAGP)
abnormal direction of heart looping  (IAGP)
abnormal embryonic neuroepithelial layer differentiation  (IAGP)
abnormal granulosa cell morphology  (IAGP)
abnormal hormone level  (IAGP)
abnormal left-right axis patterning  (IAGP)
abnormal neural tube morphology  (IAGP)
abnormal oogenesis  (IAGP)
abnormal ovarian follicle morphology  (IAGP)
abnormal ovarian follicle number  (IAGP)
abnormal ovarian folliculogenesis  (IAGP)
abnormal ovary morphology  (IAGP)
abnormal ovary secretion  (IAGP)
abnormal spermatid morphology  (IAGP)
abnormal tail position or orientation  (IAGP)
abnormal tertiary ovarian follicle morphology  (IAGP)
abnormal vascular development  (IAGP)
abnormal vascular endothelial cell morphology  (IAGP)
abnormal zona pellucida morphology  (IAGP)
anemia  (IAGP)
arrest of spermatogenesis  (IAGP)
azoospermia  (IAGP)
decreased cardiac stroke volume  (IEA)
decreased circulating testosterone level  (IAGP)
decreased embryo size  (IAGP)
decreased exploration in new environment  (IEA)
decreased litter size  (IAGP)
decreased oocyte number  (IAGP)
decreased ovary weight  (IAGP)
decreased red blood cell distribution width  (IEA)
decreased superovulation rate  (IAGP)
decreased tertiary ovarian follicle number  (IAGP)
embryonic growth arrest  (IAGP)
embryonic growth retardation  (IAGP)
embryonic lethality during organogenesis, complete penetrance  (IAGP)
female infertility  (IAGP)
hemorrhage  (IAGP)
incomplete caudal neuropore closure  (IAGP)
incomplete embryo turning  (IAGP)
incomplete rostral neuropore closure  (IAGP)
incomplete somite formation  (IAGP)
increased circulating follicle stimulating hormone level  (IAGP)
increased primary ovarian follicle number  (IAGP)
male infertility  (IAGP)
multinucleated giant male germ cells  (IAGP)
pallor  (IAGP)
polyovular ovarian follicle  (IAGP)
premature ovarian failure  (IAGP)
preweaning lethality, complete penetrance  (IEA)
reduced female fertility  (IAGP)
situs inversus  (IAGP)
thin zona pellucida  (IAGP)
References

References - curated
# Reference Title Reference Citation
1. Functional annotation of a full-length mouse cDNA collection. Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
2. MGDs mouse GO annotations MGD data from the GO Consortium
3. MGD IEA MGD IEA
4. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
5. KEGG Annotation Import Pipeline Pipeline to import KEGG annotations from KEGG into RGD
6. Mouse MP Annotation Import Pipeline RGD automated import pipeline
7. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:1421759   PMID:1533386   PMID:3733894   PMID:7558022   PMID:7590745   PMID:7713516   PMID:7767000   PMID:7829087   PMID:7881185   PMID:8148869   PMID:8187759   PMID:8290590  
PMID:8563140   PMID:8570653   PMID:8634152   PMID:9070927   PMID:9363433   PMID:9457670   PMID:10087208   PMID:10349636   PMID:10580127   PMID:10922068   PMID:11042159   PMID:11076861  
PMID:11160382   PMID:12417411   PMID:12477932   PMID:12676797   PMID:14610273   PMID:14681479   PMID:15044398   PMID:15226823   PMID:15489334   PMID:15509794   PMID:15782199   PMID:16141072  
PMID:16141073   PMID:17374637   PMID:17848545   PMID:18773292   PMID:19028923   PMID:21239444   PMID:21873635   PMID:22492969   PMID:22869740   PMID:22919046   PMID:22957033   PMID:25213859  
PMID:25263124   PMID:25557622   PMID:27111141   PMID:27269286   PMID:27581083   PMID:28059703   PMID:28347400   PMID:29386567   PMID:29853530   PMID:30138037   PMID:30550785   PMID:30610082  
PMID:32300591   PMID:32325033   PMID:32745987   PMID:33453988  


Genomics

Comparative Map Data
Mgat1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391149,135,018 - 49,153,854 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1149,135,018 - 49,153,857 (+)EnsemblGRCm39 Ensembl
GRCm381149,244,191 - 49,263,027 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1149,244,191 - 49,263,030 (+)EnsemblGRCm38mm10GRCm38
MGSCv371149,057,693 - 49,076,529 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361149,087,669 - 49,106,450 (+)NCBIMGSCv36mm8
Celera1153,806,759 - 53,825,547 (+)NCBICelera
Cytogenetic Map11B1.2NCBI
cM Map1129.27NCBI
MGAT1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385180,784,780 - 180,815,616 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5180,784,780 - 180,815,652 (-)EnsemblGRCh38hg38GRCh38
GRCh375180,211,780 - 180,242,616 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365180,150,149 - 180,162,654 (-)NCBINCBI36Build 36hg18NCBI36
Build 345180,150,153 - 180,162,654NCBI
Celera5175,841,463 - 175,861,059 (-)NCBICelera
Cytogenetic Map5q35.3NCBI
HuRef5174,942,953 - 174,962,572 (-)NCBIHuRef
CHM1_15179,649,941 - 179,669,538 (-)NCBICHM1_1
T2T-CHM13v2.05181,341,132 - 181,371,969 (-)NCBIT2T-CHM13v2.0
Mgat1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81034,064,548 - 34,083,833 (+)NCBIGRCr8
mRatBN7.21033,563,642 - 33,582,718 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1033,561,388 - 33,591,503 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1038,250,910 - 38,268,219 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0106,789,319 - 6,806,628 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01033,244,551 - 33,261,860 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01034,518,392 - 34,537,214 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1034,519,790 - 34,537,210 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01034,294,712 - 34,313,531 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41034,706,908 - 34,724,328 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11034,707,956 - 34,725,377 (+)NCBI
Celera1032,944,950 - 32,962,376 (+)NCBICelera
Cytogenetic Map10q21NCBI
Mgat1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955530437,008 - 452,289 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955530436,518 - 452,296 (+)NCBIChiLan1.0ChiLan1.0
MGAT1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24175,799,001 - 175,824,176 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15173,963,080 - 173,988,256 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05175,978,425 - 176,003,620 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15183,292,153 - 183,317,334 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5183,293,237 - 183,294,574 (-)Ensemblpanpan1.1panPan2
MGAT1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.111114,587 - 129,014 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl11115,631 - 129,091 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha11172,388 - 187,101 (-)NCBIDog10K_Boxer_Tasha
Mgat1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213118,240,717 - 118,260,848 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936826344,456 - 364,418 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936826344,452 - 364,929 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MGAT1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl257,900,216 - 57,920,954 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1257,849,185 - 57,920,410 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22159,732,009 - 159,753,282 (+)NCBISscrofa10.2Sscrofa10.2susScr3
MGAT1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12382,525,527 - 82,527,753 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2382,507,525 - 82,508,862 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
ChlSab1.1 Ensembl2382,507,525 - 82,508,862 (-)NCBIChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607513,929,392 - 13,950,488 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mgat1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462481111,050,385 - 11,069,431 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462481111,050,378 - 11,069,734 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in Mgat1
570 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:3598
Count of miRNA genes:768
Interacting mature miRNAs:999
Transcripts:ENSMUST00000081794, ENSMUST00000101293, ENSMUST00000109194, ENSMUST00000129541, ENSMUST00000129588, ENSMUST00000135314, ENSMUST00000135489, ENSMUST00000148962, ENSMUST00000149406, ENSMUST00000152451, ENSMUST00000155806, ENSMUST00000156607, ENSMUST00000167400
Prediction methods:Microtar, Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
27226798Scvln18_msacral vertebrae length 2, 16 week (mouse)11325000060690826Mouse
26884446Sklq10_mskull length QTL 10, 10 week (mouse)11325000062890826Mouse
26884453Sklq16_mskull length QTL 16, 16 week (mouse)11325000072690826Mouse
13208559Wght10_mweight 10 (mouse)11395000088890826Mouse
13208558Lgth12_mbody length 12 (mouse)11395000094890826Mouse
1300905Scc6_mcolon tumor susceptibility 6 (mouse)Not determined11688027789019734Mouse
27226738Metcl11_mmetatarsal-calcaneal length 11, 10 week (mouse)11885000061390826Mouse
26884401Huml4_mhumerus length 4, 10 week (mouse)111155000068490826Mouse
27226762Feml21_mfemur length 21, 16 week (mouse)111175000065990826Mouse
1357640Orq2_movulation rate QTL 2 (mouse)Not determined111226863768500330Mouse
4141127W3q4_mweight 3 weeks QTL 4 (mouse)Not determined1226863768500330Mouse
4141470Egq4_mearly growth QTL 4 (mouse)Not determined1226863768500330Mouse
4142109W10q2_mweight 10 weeks QTL 2 (mouse)Not determined1226863768500330Mouse
4141582Lgaq1_mlate growth adjusted QTL 1 (mouse)Not determined1226863768500330Mouse
4142308W6q3_mweight 6 weeks QTL 3 (mouse)Not determined111226863768500330Mouse
4142216Lgq1_mlate growth QTL 1 (mouse)Not determined1226863768500330Mouse
4141966Tailq1_mtail length QTL 1 (mouse)Not determined1226863768500330Mouse
1357851Scfq3_msubcutaneous fat pad weight QTL 3 (mouse)Not determined111226863768500330Mouse
1357720Kidpq1_mkidney weight percentage QTL 1 (mouse)Not determined111226863768500330Mouse
1357437Epfq4_mepididymal fat pad weight QTL 4 (mouse)Not determined111226863768500330Mouse
1559002Lmrq4_mLeishmania major resistance QTL 4 (mouse)Not determined111226863769684947Mouse
39128214Lwq20_mliver weight QTL 20 (mouse)1112268637118022724Mouse
1558945Orgwq8_morgan weight QTL 8 (mouse)Not determined111705617567078411Mouse
10053687Eae6_msusceptibility to experimental allergic encephalomyelitis 6 (mouse)Not determined111778196668500330Mouse
12801459Leuf1_mleukocyte filtration 1 (mouse)111857861652578716Mouse
12801460Intim2_mintima modifier 2 (mouse)111857861652578716Mouse
12801457Intmrm2_mintima/media ratio modifier 2 (mouse)111857861652578716Mouse
1300938Bulb3_mbulb size 3 (mouse)Not determined111857861652578716Mouse
4141894Nidd6k_mNidd6 on KK-A (mouse)Not determined1912420496897826Mouse
1300579Thypr1_mthymocyte proliferative response 1 (mouse)Not determined111928257753282715Mouse
14746971Manh70_mmandible shape 70 (mouse)111990589053905890Mouse
4141398Tgq22_mtriglyceride QTL 22 (mouse)Not determined2116340655163406Mouse
10412246Dfs2_mdental fluorosis suseptibility 2 (mouse)Not determined112180736495881231Mouse
10044006Hbnr13_mHeligmosomoides bakeri nematode resistance 13 (mouse)Not determined112577262659772741Mouse
12910801Pwbwq14_mpost-weaning body weight QTL 14 (mouse)112719805750636094Mouse
12910804Pwbwq16_mpost-weaning body weight QTL 16 (mouse)112719805750636094Mouse
12910806Pwbwq15_mpost-weaning body weight QTL 15 (mouse)112719805750636094Mouse
12910817Pwgrq20_mpost-weaning growth rate QTL 20 (mouse)112719805750636094Mouse
12910818Ogrq5_moverall growth rate QTL 5 (mouse)112719805750636094Mouse
1357844Si5lq5_mserum IGFBP-5 level QTL 5 (mouse)Not determined112816587362165976Mouse
13524848Ppiq7_mprepulse inhibition QTL 7 (mouse)112856914762569147Mouse
1301426Desp2_mdespair 2 (mouse)Not determined112870858162708700Mouse
11522752Cocia18_mcocaine-induced activity, QTL 18 (mouse)113100820965008209Mouse
11059563Lmr31_mleishmaniasis resistance 31 (mouse)113210057766100694Mouse
1357782Char8_mP. chabaudi malaria resistance QTL 8 (mouse)Not determined113557861669684987Mouse
13208569Bmiq10_mbody mass index QTL 10 (mouse)113589082784890826Mouse
1301328Mol4_mmodifier of LPS-response 4 (mouse)Not determined113628257783481356Mouse
1301788Lbw8_mlupus NZB x NZW 8 (mouse)Not determined113650328770509492Mouse
1301896Tria1_mT-cell receptor induced activation 1 (mouse)Not determined113661356570613855Mouse
4141853Skmw17_mskeletal muscle weight 17 (mouse)Not determined113708094171081064Mouse
4142475Ity2a_mimmunity to S. typhimurium 2a (mouse)Not determined113776858060402716Mouse
10766457Nwa3_mNew Zealand White autoimmunity 3 (mouse)113801611572016209Mouse
10053675Eae44b_mexperimental allergic encephalomyelitis susceptibility 44b (mouse)Not determined113995072854094448Mouse
11532698Sluc36a_msusceptibility to lung cancer 36a (mouse)114225661776256730Mouse
11532699Sluc36b_msusceptibility to lung cancer 36b (mouse)114225661776256730Mouse
1300713Vmbic10_mventral midbrain iron content 10 (mouse)Not determined114277262654081064Mouse
4142300Ctrq3_mC. trachomatis resistance QTL 3 (mouse)Not determined114463003876854757Mouse
4141367Inf1_macute ozone induced inflammation (mouse)Not determined44630038113058009Mouse
1302021Nidd1n_mnon-insulin-dependent diabetes mellitus 1 in NSY (mouse)Not determined114516587379978324Mouse
1357878Mastr_mmodifier of astrocytoma (mouse)Not determined114570858189818733Mouse
1300765Bbaa4_mB.burgdorferi-associated arthritis 4 (mouse)Not determined114618516780185262Mouse
1301988Bmd11_mbone mineral density 11 (mouse)Not determined114631940780319522Mouse
13452402Hipmt3_mhippocampal morphometry trait 3 (mouse)114797732550277325Mouse

Markers in Region
27.MMHAP62FLA6.seq  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381149,245,697 - 49,245,875UniSTSGRCm38
MGSCv371149,059,199 - 49,059,377UniSTSGRCm37
Cytogenetic Map11B1.2UniSTS
Whitehead_YAC11 UniSTS
Mgat1  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381149,261,234 - 49,261,465UniSTSGRCm38
MGSCv371149,074,736 - 49,074,967UniSTSGRCm37
Celera1153,823,754 - 53,823,985UniSTS
Cytogenetic Map11B1.2UniSTS
cM Map1128.5UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001110148 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110149 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_001110150 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NM_010794 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532398 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532399 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006532400 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_017314314 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030245630 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156375 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_036156376 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AI118268 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK004760 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK040121 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK087959 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK155322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK179728 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK186009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK201875 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK218584 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AL606829 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC006629 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031752 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BY088342 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  L07037 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  M73491 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X77487 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  X77488 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

RefSeq Acc Id: ENSMUST00000081794   ⟹   ENSMUSP00000080484
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,135,073 - 49,153,854 (+)Ensembl
GRCm38.p6 Ensembl1149,244,246 - 49,263,027 (+)Ensembl
RefSeq Acc Id: ENSMUST00000101293   ⟹   ENSMUSP00000098851
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,141,339 - 49,153,857 (+)Ensembl
GRCm38.p6 Ensembl1149,250,512 - 49,263,030 (+)Ensembl
RefSeq Acc Id: ENSMUST00000109194   ⟹   ENSMUSP00000104817
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,138,304 - 49,153,822 (+)Ensembl
GRCm38.p6 Ensembl1149,247,477 - 49,262,995 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129541
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,141,399 - 49,151,518 (+)Ensembl
GRCm38.p6 Ensembl1149,250,572 - 49,260,691 (+)Ensembl
RefSeq Acc Id: ENSMUST00000129588   ⟹   ENSMUSP00000114965
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,141,417 - 49,152,118 (+)Ensembl
GRCm38.p6 Ensembl1149,250,590 - 49,261,291 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135314
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,147,071 - 49,148,661 (+)Ensembl
GRCm38.p6 Ensembl1149,256,244 - 49,257,834 (+)Ensembl
RefSeq Acc Id: ENSMUST00000135489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,135,236 - 49,136,287 (+)Ensembl
GRCm38.p6 Ensembl1149,244,409 - 49,245,460 (+)Ensembl
RefSeq Acc Id: ENSMUST00000148962
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,139,784 - 49,142,464 (+)Ensembl
GRCm38.p6 Ensembl1149,248,957 - 49,251,637 (+)Ensembl
RefSeq Acc Id: ENSMUST00000149406
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,141,392 - 49,148,799 (+)Ensembl
GRCm38.p6 Ensembl1149,250,565 - 49,257,972 (+)Ensembl
RefSeq Acc Id: ENSMUST00000152451
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,135,394 - 49,136,244 (+)Ensembl
GRCm38.p6 Ensembl1149,244,567 - 49,245,417 (+)Ensembl
RefSeq Acc Id: ENSMUST00000155806
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,138,310 - 49,151,649 (+)Ensembl
GRCm38.p6 Ensembl1149,247,483 - 49,260,822 (+)Ensembl
RefSeq Acc Id: ENSMUST00000156607
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,136,058 - 49,151,518 (+)Ensembl
GRCm38.p6 Ensembl1149,245,231 - 49,260,691 (+)Ensembl
RefSeq Acc Id: ENSMUST00000167400   ⟹   ENSMUSP00000126303
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1149,135,018 - 49,153,849 (+)Ensembl
GRCm38.p6 Ensembl1149,244,191 - 49,263,022 (+)Ensembl
RefSeq Acc Id: NM_001110148   ⟹   NP_001103618
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,135,018 - 49,153,854 (+)NCBI
GRCm381149,244,191 - 49,263,027 (+)NCBI
MGSCv371149,057,693 - 49,076,529 (+)RGD
Celera1153,806,759 - 53,825,547 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110149   ⟹   NP_001103619
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,138,304 - 49,153,854 (+)NCBI
GRCm381149,247,477 - 49,263,027 (+)NCBI
MGSCv371149,057,693 - 49,076,529 (+)RGD
Celera1153,806,759 - 53,825,547 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_001110150   ⟹   NP_001103620
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,141,379 - 49,153,854 (+)NCBI
GRCm381149,250,552 - 49,263,027 (+)NCBI
MGSCv371149,057,693 - 49,076,529 (+)RGD
Celera1153,806,759 - 53,825,547 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: NM_010794   ⟹   NP_034924
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,135,018 - 49,153,854 (+)NCBI
GRCm381149,244,191 - 49,263,027 (+)NCBI
MGSCv371149,057,693 - 49,076,529 (+)RGD
Celera1153,806,759 - 53,825,547 (+)RGD
cM Map11 ENTREZGENE
Sequence:
RefSeq Acc Id: XM_006532398   ⟹   XP_006532461
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,137,608 - 49,153,854 (+)NCBI
GRCm381149,246,810 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006532399   ⟹   XP_006532462
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,141,495 - 49,153,854 (+)NCBI
GRCm381149,250,669 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006532400   ⟹   XP_006532463
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,138,438 - 49,153,854 (+)NCBI
GRCm381149,247,759 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_017314314   ⟹   XP_017169803
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,135,023 - 49,153,854 (+)NCBI
GRCm381149,244,196 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245629   ⟹   XP_030101489
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,135,023 - 49,153,854 (+)NCBI
GRCm381149,244,196 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030245630   ⟹   XP_030101490
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,138,438 - 49,153,854 (+)NCBI
GRCm381149,247,759 - 49,263,027 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156375   ⟹   XP_036012268
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,135,247 - 49,153,854 (+)NCBI
Sequence:
RefSeq Acc Id: XM_036156376   ⟹   XP_036012269
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391149,138,438 - 49,153,854 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs NP_001103618 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103619 (Get FASTA)   NCBI Sequence Viewer  
  NP_001103620 (Get FASTA)   NCBI Sequence Viewer  
  NP_034924 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532461 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532462 (Get FASTA)   NCBI Sequence Viewer  
  XP_006532463 (Get FASTA)   NCBI Sequence Viewer  
  XP_017169803 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101489 (Get FASTA)   NCBI Sequence Viewer  
  XP_030101490 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012268 (Get FASTA)   NCBI Sequence Viewer  
  XP_036012269 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein AAA37698 (Get FASTA)   NCBI Sequence Viewer  
  AAA40478 (Get FASTA)   NCBI Sequence Viewer  
  AAH06629 (Get FASTA)   NCBI Sequence Viewer  
  AAH31752 (Get FASTA)   NCBI Sequence Viewer  
  BAB23541 (Get FASTA)   NCBI Sequence Viewer  
  BAC30515 (Get FASTA)   NCBI Sequence Viewer  
  BAC40058 (Get FASTA)   NCBI Sequence Viewer  
  BAE33189 (Get FASTA)   NCBI Sequence Viewer  
  EDL33761 (Get FASTA)   NCBI Sequence Viewer  
  EDL33762 (Get FASTA)   NCBI Sequence Viewer  
  EDL33763 (Get FASTA)   NCBI Sequence Viewer  
  EDL33764 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSMUSP00000080484
  ENSMUSP00000080484.7
  ENSMUSP00000098851
  ENSMUSP00000098851.5
  ENSMUSP00000104817
  ENSMUSP00000104817.2
  ENSMUSP00000114965.2
  ENSMUSP00000126303
  ENSMUSP00000126303.2
GenBank Protein P27808 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: NP_034924   ⟸   NM_010794
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103618   ⟸   NM_001110148
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103619   ⟸   NM_001110149
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: NP_001103620   ⟸   NM_001110150
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532461   ⟸   XM_006532398
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532463   ⟸   XM_006532400
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_006532462   ⟸   XM_006532399
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_017169803   ⟸   XM_017314314
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_030101489   ⟸   XM_030245629
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030101490   ⟸   XM_030245630
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000098851   ⟸   ENSMUST00000101293
RefSeq Acc Id: ENSMUSP00000080484   ⟸   ENSMUST00000081794
RefSeq Acc Id: ENSMUSP00000114965   ⟸   ENSMUST00000129588
RefSeq Acc Id: ENSMUSP00000104817   ⟸   ENSMUST00000109194
RefSeq Acc Id: ENSMUSP00000126303   ⟸   ENSMUST00000167400
RefSeq Acc Id: XP_036012268   ⟸   XM_036156375
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_036012269   ⟸   XM_036156376
- Peptide Label: isoform X1
- UniProtKB: P27808 (UniProtKB/Swiss-Prot),   Q544F0 (UniProtKB/TrEMBL),   Q8CIC9 (UniProtKB/TrEMBL)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-P27808-F1-model_v2 AlphaFold P27808 1-447 view protein structure

Promoters
RGD ID:6821264
Promoter ID:MM_KWN:7174
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day4,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000081794,   NM_001110148,   OTTMUST00000012321,   OTTMUST00000012322,   UC007IQC.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,057,191 - 49,059,097 (+)MPROMDB
RGD ID:6821263
Promoter ID:MM_KWN:7175
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Spleen
Transcripts:NM_001110149,   OTTMUST00000012324
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,060,726 - 49,061,226 (+)MPROMDB
RGD ID:6821266
Promoter ID:MM_KWN:7176
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Kidney,   Liver,   Lung,   Spleen
Transcripts:OTTMUST00000012325
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,062,341 - 49,062,947 (+)MPROMDB
RGD ID:6821265
Promoter ID:MM_KWN:7177
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:OTTMUST00000012315,   OTTMUST00000012316,   OTTMUST00000012319,   OTTMUST00000012320
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,063,166 - 49,064,207 (+)MPROMDB
RGD ID:6821267
Promoter ID:MM_KWN:7178
Type:Non-CpG
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:BoneMarrow_2Hour,   BoneMarrow_4Hour,   Liver
Transcripts:OTTMUST00000012318
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361149,069,111 - 49,069,847 (+)MPROMDB
RGD ID:8674466
Promoter ID:EPDNEW_M15264
Type:initiation region
Name:Mgat1_3
Description:Mus musculus mannoside acetylglucosaminyltransferase 1 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15265  EPDNEW_M15266  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381149,244,249 - 49,244,309EPDNEW
RGD ID:8674468
Promoter ID:EPDNEW_M15265
Type:initiation region
Name:Mgat1_2
Description:Mus musculus mannoside acetylglucosaminyltransferase 1 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15264  EPDNEW_M15266  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381149,247,494 - 49,247,554EPDNEW
RGD ID:8674470
Promoter ID:EPDNEW_M15266
Type:initiation region
Name:Mgat1_1
Description:Mus musculus mannoside acetylglucosaminyltransferase 1 , transcriptvariant 4, mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Alternative Promoters:null; see alsoEPDNEW_M15264  EPDNEW_M15265  
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381149,250,591 - 49,250,651EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:96973 AgrOrtholog
Ensembl Genes ENSMUSG00000020346 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000081794 ENTREZGENE
  ENSMUST00000081794.7 UniProtKB/Swiss-Prot
  ENSMUST00000101293 ENTREZGENE
  ENSMUST00000101293.11 UniProtKB/Swiss-Prot
  ENSMUST00000109194 ENTREZGENE
  ENSMUST00000109194.2 UniProtKB/Swiss-Prot
  ENSMUST00000129588.2 UniProtKB/TrEMBL
  ENSMUST00000167400 ENTREZGENE
  ENSMUST00000167400.8 UniProtKB/Swiss-Prot
Gene3D-CATH N-Acetylglucosaminyltransferase I, Domain 2 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Glyco_trans_13 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:17308 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
MGD MGI:96973 ENTREZGENE
NCBI Gene 17308 ENTREZGENE
PANTHER ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam GNT-I UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Mgat1 PhenoGen
Superfamily-SCOP SSF53448 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt J3JS24_MOUSE UniProtKB/TrEMBL
  MGAT1_MOUSE UniProtKB/Swiss-Prot, ENTREZGENE
  Q544F0 ENTREZGENE, UniProtKB/TrEMBL
  Q8CIC9 ENTREZGENE, UniProtKB/TrEMBL