Pdcd4 (programmed cell death 4) - Rat Genome Database

Name: Pdcd4
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: Pdcd4 (programmed cell death 4) Mus musculus

Analyze

Symbol:

Pdcd4

Name:

programmed cell death 4

RGD ID:

732160

MGI Page

MGI

Description:

Predicted to enable RNA binding activity. Involved in cellular response to lipopolysaccharide; negative regulation of cytokine production involved in inflammatory response; and positive regulation of inflammatory response. Predicted to be located in cytoplasm. Predicted to be active in cytosol and nucleus. Is expressed in several structures, including brain; early conceptus; epithelium; oocyte; and thymus primordium. Orthologous to human PDCD4 (programmed cell death 4).

Type:

protein-coding

RefSeq Status:

VALIDATED

Previously known as:

D19Ucl; D19Ucla1; MA-; Ma3; programmed cell death protein 4; protein MA-3; T; Tis; topoisomerase-inhibitor suppressed protein

RGD Orthologs

Human

Rat

Chinchilla

Bonobo

Dog

Squirrel

Pig

Green Monkey

Naked Mole-Rat

Alliance Genes

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	PDCD4 (programmed cell death 4)	HGNC	EggNOG, Ensembl, HGNC, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Rattus norvegicus (Norway rat):	Pdcd4 (programmed cell death 4)	HGNC	Treefam, EggNOG, OrthoMCL, NCBI, OMA, HomoloGene, Inparanoid, Panther, PhylomeDB, OrthoDB, Ensembl
Chinchilla lanigera (long-tailed chinchilla):	Pdcd4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	PDCD4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	PDCD4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Pdcd4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	PDCD4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	PDCD4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Pdcd4 (programmed cell death 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Alliance orthologs ³
Rattus norvegicus (Norway rat):	Pdcd4 (programmed cell death 4)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Homo sapiens (human):	PDCD4 (programmed cell death 4)	Alliance	DIOPT (Ensembl Compara\|HGNC\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)
Danio rerio (zebrafish):	pdcd4b (programmed cell death 4b)	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid\|ZFIN)
Drosophila melanogaster (fruit fly):	Pdcd4	Alliance	DIOPT (Ensembl Compara\|Hieranoid\|InParanoid\|OMA\|OrthoFinder\|OrthoInspector\|PANTHER\|PhylomeDB\|SonicParanoid)

Latest Assembly:

GRCm39 - Mouse Genome Assembly GRCm39

Position:

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	53,880,662 - 53,926,024 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	19	53,880,662 - 53,918,291 (+)	Ensembl
GRCm38	19	53,892,231 - 53,937,592 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	53,892,231 - 53,929,860 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	53,966,721 - 54,004,351 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	19	53,956,779 - 53,983,162 (+)	NCBI			mm8
Celera	19	56,087,143 - 56,124,829 (+)	NCBI		Celera
Cytogenetic Map	19	D2	NCBI
cM Map	19	48.73	NCBI

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Arterial Injury (ISO)

dilated cardiomyopathy 1DD (ISO)

Lung Neoplasms (ISO)

Neoplasm Invasiveness (ISO)

Neoplastic Cell Transformation (ISO)

RASopathy (ISO)

skin melanoma (ISO)

Gene-Chemical Interaction Annotations Click to see Annotation Detail View

(+)-dexrazoxane (EXP)

(-)-citrinin (ISO)

1,1,1-trichloro-2,2-bis(4-hydroxyphenyl)ethane (ISO)

17alpha-ethynylestradiol (ISO)

17beta-estradiol (ISO)

2,3,7,8-tetrachlorodibenzodioxine (EXP,ISO)

2,3-bis(4-hydroxyphenyl)propionitrile (ISO)

2-hydroxypropanoic acid (ISO)

2-nitrofluorene (ISO)

3,3',5,5'-tetrabromobisphenol A (EXP)

3-methylcholanthrene (ISO)

4,4'-diaminodiphenylmethane (EXP)

4-(N-nitrosomethylamino)-1-(3-pyridyl)butan-1-one (ISO)

4-hydroxynon-2-enal (EXP)

5-fluorouracil (ISO)

afimoxifene (ISO)

aflatoxin B1 (ISO)

all-trans-retinoic acid (ISO)

ammonium chloride (ISO)

aristolochic acid (ISO)

Aroclor 1254 (EXP)

arsane (ISO)

arsenic atom (ISO)

arsenite(3-) (ISO)

arsenous acid (ISO)

beauvericin (ISO)

benzo[a]pyrene (EXP,ISO)

benzo[a]pyrene diol epoxide I (ISO)

berberine (ISO)

bisphenol A (EXP,ISO)

buspirone (ISO)

butanal (ISO)

cadmium dichloride (ISO)

carbamazepine (ISO)

carbon nanotube (EXP)

chlorpyrifos (EXP)

chromium(6+) (EXP,ISO)

clofibrate (EXP)

clofibric acid (ISO)

clonidine (ISO)

clonidine (amino form) (ISO)

clonidine (imino form) (ISO)

cobalt atom (EXP)

cobalt dichloride (ISO)

corosolic acid (EXP)

coumestrol (ISO)

crocidolite asbestos (EXP)

cyclophosphamide (ISO)

cyclosporin A (ISO)

D-mannitol (ISO)

DDT (ISO)

dehydroepiandrosterone (ISO)

dextran sulfate (EXP)

diarsenic trioxide (ISO)

diazinon (ISO)

dibenzo[a,l]pyrene (EXP)

dibutyl phthalate (ISO)

diclofenac (ISO)

dicrotophos (ISO)

dimethyl sulfoxide (ISO)

dorsomorphin (ISO)

doxorubicin (EXP)

endosulfan (ISO)

Enterolactone (ISO)

entinostat (ISO)

enzyme inhibitor (ISO)

ethanol (EXP)

fenhexamid (ISO)

fenthion (EXP)

finasteride (ISO)

fingolimod hydrochloride (ISO)

fludioxonil (ISO)

flutamide (ISO)

formaldehyde (ISO)

fulvestrant (ISO)

gamma-hexachlorocyclohexane (ISO)

genistein (ISO)

gentamycin (ISO)

glyphosate (ISO)

hydrogen peroxide (ISO)

hydroquinone (ISO)

ivermectin (ISO)

lead(0) (ISO)

lead(2+) (ISO)

leflunomide (ISO)

LY294002 (ISO)

maslinic acid (EXP)

mechlorethamine (EXP)

menadione (ISO)

methapyrilene (ISO)

methidathion (EXP)

methylisothiazolinone (ISO)

methylmercury chloride (ISO)

motexafin gadolinium (ISO)

mycophenolic acid (ISO)

N-acetyl-L-cysteine (EXP,ISO)

N-methyl-4-phenylpyridinium (ISO)

N-nitrosodiethylamine (ISO)

nefazodone (ISO)

nifedipine (ISO)

nimesulide (ISO)

NS-398 (ISO)

ochratoxin A (ISO)

oxaliplatin (ISO)

ozone (EXP)

p-toluidine (ISO)

paracetamol (EXP,ISO)

pentachlorophenol (EXP)

phenobarbital (EXP,ISO)

phorbol 13-acetate 12-myristate (EXP,ISO)

piperonyl butoxide (ISO)

pirinixic acid (EXP,ISO)

potassium chromate (ISO)

potassium dichromate (ISO)

prednisolone (ISO)

progesterone (ISO)

quercetin (ISO)

quercetin 3-O-beta-D-galactopyranoside (ISO)

rac-lactic acid (ISO)

resveratrol (EXP,ISO)

SB 431542 (ISO)

scopolamine (ISO)

silicon dioxide (EXP)

sirolimus (EXP,ISO)

sodium arsenite (ISO)

succimer (EXP)

T-2 toxin (ISO)

tert-butyl hydroperoxide (ISO)

testosterone (ISO)

testosterone enanthate (ISO)

tetrachloromethane (EXP,ISO)

tolbutamide (ISO)

topotecan (ISO)

triphenyl phosphate (ISO)

troglitazone (EXP)

tungsten (EXP)

Tungsten carbide (EXP)

urethane (ISO)

valproic acid (EXP,ISO)

wortmannin (ISO)

zinc acetate (ISO)

zinc atom (ISO)

zinc(0) (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

apoptotic process (IEA)

BMP signaling pathway (ISO)

cellular response to lipopolysaccharide (IMP)

epithelial to mesenchymal transition involved in cardiac fibroblast development (ISO)

negative regulation of apoptotic process (ISO)

negative regulation of cytokine production involved in inflammatory response (IMP)

negative regulation of DNA-templated transcription (ISO)

negative regulation of myofibroblast differentiation (ISO)

negative regulation of vascular associated smooth muscle cell differentiation (ISO)

negative regulation of vascular associated smooth muscle cell proliferation (ISO)

obsolete cell aging (ISO)

positive regulation of endothelial cell apoptotic process (ISO)

positive regulation of inflammatory response (IMP)

positive regulation of NIK/NF-kappaB signaling (ISO)

positive regulation of smooth muscle cell apoptotic process (ISO)

positive regulation of vascular associated smooth muscle cell apoptotic process (ISO)

regulation of protein metabolic process (ISO)

Cellular Component

cytoplasm (ISO)

cytosol (IBA,ISO)

nucleus (IBA,ISO)

Molecular Function

protein binding (IPI)

RNA binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

mTOR signaling pathway (ISO)

Phenotype Annotations Click to see Annotation Detail View

Mammalian Phenotype

abnormal cytokine secretion (IAGP)

decreased susceptibility to autoimmune diabetes (IAGP)

decreased susceptibility to experimental autoimmune encephalomyelitis (IAGP)

increased B cell derived lymphoma incidence (IAGP)

increased papilloma incidence (IAGP)

kidney cyst (IAGP)

ovary cyst (IAGP)

premature death (IAGP)

preneoplasia (IAGP)

prostate gland cyst (IAGP)

References

References - curated

#	Reference Title	Reference Citation
1.	Expression and clinicopathological significance of microRNA-21 and programmed cell death 4 in malignant melanoma.	Jiao J, etal., J Int Med Res. 2015 Oct;43(5):672-8. doi: 10.1177/0300060515583707. Epub 2015 Jul 6.
2.	Functional annotation of a full-length mouse cDNA collection.	Kawai J, etal., Nature. 2001 Feb 8;409(6821):685-90.
3.	Identification of candidate lung cancer susceptibility genes in mouse using oligonucleotide arrays.	Lemon WJ, etal., J Med Genet 2002 Sep;39(9):644-55.
4.	An essential role of PDCD4 in vascular smooth muscle cell apoptosis and proliferation: implications for vascular disease.	Liu X, etal., Am J Physiol Cell Physiol. 2010 Jun;298(6):C1481-8. doi: 10.1152/ajpcell.00413.2009. Epub 2010 Mar 31.
5.	Berberine regulates the microRNA-21-ITGΒ4-PDCD4 axis and inhibits colon cancer viability.	Lü Y, etal., Oncol Lett. 2018 Apr;15(4):5971-5976. doi: 10.3892/ol.2018.7997. Epub 2018 Feb 8.
6.	Electronic Transfer of Homolog Data	MGD and Homologene mouse data transfer
7.	MGDs mouse GO annotations	MGD data from the GO Consortium
8.	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs.	Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
9.	PID Annotation Import Pipeline	Pipeline to import Pathway Interaction Database annotations from NCI into RGD
10.	Mouse MP Annotation Import Pipeline	RGD automated import pipeline
11.	Data Import for Chemical-Gene Interactions	RGD automated import pipeline for gene-chemical interactions
12.	Linkage mapping of 40 randomly isolated liver cDNA clones in the mouse.	Warden CH, etal., Genomics 1993 Nov;18(2):295-307.

Additional References at PubMed

PMID:8543179	PMID:8661734	PMID:8827514	PMID:8912629	PMID:9434961	PMID:9714845	PMID:9771644	PMID:10349636	PMID:10570194	PMID:10922068	PMID:11042159	PMID:11076861
PMID:12242666	PMID:12477932	PMID:12482958	PMID:12802278	PMID:12894233	PMID:14610273	PMID:15334056	PMID:15489334	PMID:16024603	PMID:16141072	PMID:16141073	PMID:16357133
PMID:16602821	PMID:16682971	PMID:17060447	PMID:17114484	PMID:18296647	PMID:18372920	PMID:19153607	PMID:19414503	PMID:19946272	PMID:20455770	PMID:21267068	PMID:21454508
PMID:21677750	PMID:21730150	PMID:21731673	PMID:21873635	PMID:22087031	PMID:22586265	PMID:22922362	PMID:23105104	PMID:23295647	PMID:23450345	PMID:23544605	PMID:23578931
PMID:23597671	PMID:23891589	PMID:23990362	PMID:24098127	PMID:24196965	PMID:24626527	PMID:24732886	PMID:24895206	PMID:25322693	PMID:25737280	PMID:25738901	PMID:25862855
PMID:25979949	PMID:26166769	PMID:26703592	PMID:26891257	PMID:26936421	PMID:27031966	PMID:27454120	PMID:27843203	PMID:28240263	PMID:28378742	PMID:28644433	PMID:28692058
PMID:28750063	PMID:29238035	PMID:29361523	PMID:29923218	PMID:30257106	PMID:30552326	PMID:30760284	PMID:30841417	PMID:31040226	PMID:31288148	PMID:32203159	PMID:32747606
PMID:32808325	PMID:32855524	PMID:33665757	PMID:33831322	PMID:34036390	PMID:34613548	PMID:34679210

Genomics

Comparative Map Data

Pdcd4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	53,880,662 - 53,926,024 (+)	NCBI	GRCm39		mm39
GRCm39 Ensembl	19	53,880,662 - 53,918,291 (+)	Ensembl
GRCm38	19	53,892,231 - 53,937,592 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	53,892,231 - 53,929,860 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	53,966,721 - 54,004,351 (+)	NCBI	GRCm37		mm9	NCBIm37
MGSCv36	19	53,956,779 - 53,983,162 (+)	NCBI			mm8
Celera	19	56,087,143 - 56,124,829 (+)	NCBI		Celera
Cytogenetic Map	19	D2	NCBI
cM Map	19	48.73	NCBI

PDCD4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	110,871,928 - 110,900,006 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p13 Ensembl	10	110,871,795 - 110,900,006 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	112,631,686 - 112,659,764 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	112,621,586 - 112,649,754 (+)	NCBI	NCBI36		hg18	NCBI36
Build 34	10	112,621,585 - 112,649,753	NCBI
Celera	10	106,363,204 - 106,391,372 (+)	NCBI
Cytogenetic Map	10	q25.2	NCBI
HuRef	10	106,260,410 - 106,288,621 (+)	NCBI		HuRef
CHM1_1	10	112,913,378 - 112,941,587 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	10	111,755,712 - 111,783,789 (+)	NCBI

Pdcd4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
mRatBN7.2	1	252,921,342 - 252,944,278 (+)	NCBI	mRatBN7.2
mRatBN7.2 Ensembl	1	252,921,392 - 252,944,275 (+)	Ensembl
Rnor_6.0	1	274,616,625 - 274,648,204 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	274,625,224 - 274,648,204 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	282,029,865 - 282,061,732 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	260,183,648 - 260,202,032 (+)	NCBI	RGSC3.4		rn4	RGSC3.4
RGSC_v3.1	1	260,394,692 - 260,413,077 (+)	NCBI
Celera	1	248,639,428 - 248,657,812 (+)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

Pdcd4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955485	529,860 - 553,601 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955485	530,642 - 553,508 (-)	NCBI	ChiLan1.0	ChiLan1.0

PDCD4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
PanPan1.1	10	110,914,222 - 110,942,394 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	110,914,222 - 110,942,394 (+)	Ensembl	panpan1.1		panPan2
Mhudiblu_PPA_v0	10	107,465,084 - 107,493,285 (+)	NCBI	Mhudiblu_PPA_v0		panPan3

PDCD4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	22,198,274 - 22,227,184 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	22,198,322 - 22,226,717 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	22,350,385 - 22,379,252 (+)	NCBI
ROS_Cfam_1.0	28	22,722,838 - 22,751,713 (+)	NCBI
ROS_Cfam_1.0 Ensembl	28	22,722,897 - 22,752,395 (+)	Ensembl
UMICH_Zoey_3.1	28	22,282,298 - 22,310,940 (+)	NCBI
UNSW_CanFamBas_1.0	28	22,289,098 - 22,317,724 (+)	NCBI
UU_Cfam_GSD_1.0	28	22,423,221 - 22,451,894 (+)	NCBI

Pdcd4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	23,855,886 - 23,877,135 (-)	NCBI
SpeTri2.0	NW_004936486	1,684,167 - 1,705,387 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

PDCD4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	121,305,629 - 121,338,740 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	121,271,824 - 121,334,767 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	132,232,416 - 132,261,645 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

PDCD4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	103,809,005 - 103,836,402 (+)	NCBI	ChlSab1.1		chlSab2
ChlSab1.1 Ensembl	9	103,813,211 - 103,836,002 (+)	Ensembl	ChlSab1.1		chlSab2
Vero_WHO_p1.0	NW_023666048	65,014,586 - 65,042,439 (+)	NCBI	Vero_WHO_p1.0

Pdcd4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624737	35,414,078 - 35,451,023 (-)	NCBI	HetGla_female_1.0		hetGla2

Position Markers

AU017267

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	19	53,922,807 - 53,922,892	UniSTS	GRCm38
MGSCv37	19	53,997,297 - 53,997,382	UniSTS	GRCm37
Celera	19	56,117,764 - 56,117,849	UniSTS
Cytogenetic Map	19	D2	UniSTS
cM Map	19	20.0	UniSTS
Whitehead/MRC_RH	19	567.29	UniSTS

D19Mit36

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	19	53,922,910 - 53,923,073	UniSTS	GRCm38
MGSCv37	19	53,997,400 - 53,997,563	UniSTS	GRCm37
Celera	19	56,117,867 - 56,118,037	UniSTS
Cytogenetic Map	19	D2	UniSTS
cM Map	19	52.0	UniSTS
Whitehead Genetic	19	40.4	UniSTS
Whitehead/MRC_RH	19	563.07	UniSTS
Whitehead_YAC	19		UniSTS

RH133731

Mouse Assembly	Chr	Position (strand)	Source	JBrowse
GRCm38	19	53,929,103 - 53,929,825	UniSTS	GRCm38
MGSCv37	19	54,003,593 - 54,004,315	UniSTS	GRCm37
Celera	19	56,124,073 - 56,124,793	UniSTS
Cytogenetic Map	19	D2	UniSTS
cM Map	19	20.0	UniSTS

QTLs in Region (GRCm39)

The following QTLs overlap with this region.

RGD ID	Symbol	Name	LOD	P Value	Trait	Sub Trait	Chr	Start	Stop	Species
4142343	Moen2_m	modifier of engrailed QTL 2 (mouse)			Not determined		19	20234314	54234461	Mouse
10412251	Mnp_m	modifier of Niemann Pick type C1 (mouse)			Not determined		19	20234314	54234461	Mouse
4141659	Pbwg20_m	postnatal body weight growth 20 (mouse)			Not determined		19	21378705	55378928	Mouse
1558876	W3q14_m	weight 3 weeks QTL 14 (mouse)			Not determined		19	22313326	53911504	Mouse
12790634	Ebm1_m	Epidermolysis Bullosa modifier 1 (mouse)					19	24988439	58988439	Mouse
1301451	Ath16_m	atherosclerosis 16 (mouse)			Not determined		19	25426917	59427005	Mouse
13506250	Renmq1_m	renal mercury accumulation QTL 1 (mouse)					19	27385594	61385705	Mouse
4141138	Femwf11_m	femur work to failure 11 (mouse)			Not determined			28140348	61420004	Mouse
1300683	Fembm7_m	femoral bone morphometry 7 (mouse)			Not determined		19	30141224	61420004	Mouse
1301942	Pas13_m	pulmonary adenoma susceptibility 13 (mouse)			Not determined		19	30141231	61420004	Mouse
1301410	Cd8mts6_m	CD8 memory T cell subset 6 (mouse)			Not determined		19	30141231	61420004	Mouse
1300856	Nobq2_m	New Zealand obese QTL 2 (mouse)			Not determined		19	30897880	61420004	Mouse
1301741	Lith2_m	lithogenic gene 2 (mouse)			Not determined		19	32992158	61420004	Mouse
1301639	Stnn_m	striatal neuron number (mouse)			Not determined		19	33951952	61420004	Mouse
4141019	Tgq29_m	triglyceride QTL 29 (mouse)			Not determined			34596786	61420004	Mouse
1302170	Tanidd1_m	tally ho associated non-insulin dependednt diabetes mellitus 1 (mouse)			Not determined		19	36752597	61420004	Mouse
4141650	Chldq9_m	cholesterol and HDL QTL 9 (mouse)			Not determined		19	37882982	61420004	Mouse
1301466	T2dm2_m	type 2 diabetes mellitus 2 (mouse)			Not determined		19	38376050	61420004	Mouse
1302104	Lfp1_m	long free running period 1 (mouse)			Not determined		19	39184064	61420004	Mouse
10043896	Bw21_m	body weight QTL 21 (mouse)			Not determined		19	39596066	61420004	Mouse
1300585	Pgia12_m	proteoglycan induced arthritis 12 (mouse)			Not determined		19	42586859	61420004	Mouse
4141412	Acsns1_m	Angiostrongylus costaricensis nematode susceptibility 1 (mouse)			Not determined			47897880	55026545	Mouse
11667075	Led3_m	late embryonic death 3 (mouse)					19	51088378	59123872	Mouse

miRNA Target Status

Confirmed Target Of

miRNA Gene	Mature miRNA	Method Name	Result Type	Data Type	Support Type	PMID
Mir182	mmu-miR-182-5p	OncomiRDB	external_info	NA	NA	23296900
Mir183	mmu-miR-183-5p	OncomiRDB	external_info	NA	NA	20602797
Mir21a	mmu-miR-21a-5p	Mirtarbase	external_info	Luciferase reporter assay//Western blot	Functional MTI	18372920
Mir21a	mmu-miR-21a-5p	Mirtarbase	external_info	qRT-PCR	Functional MTI (Weak)	21273303
Mir21a	mmu-miR-21a-5p	Mirtarbase	external_info	qRT-PCR	Functional MTI (Weak)	21295561
Mir21a	mmu-miR-21a-5p	Mirtarbase	external_info	Western blot	Functional MTI	20404348

Predicted Target Of

	Summary Value
Count of predictions:	469
Count of miRNA genes:	173
Interacting mature miRNAs:	201
Transcripts:	ENSMUST00000025931, ENSMUST00000074371, ENSMUST00000165617
Prediction methods:	Miranda, Rnahybrid, Targetscan
Result types:	miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	NM_001168491	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_001168492	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	NM_011050	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_006526762	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030250768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_030250769	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036161459	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036161460	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_036161461	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AB010139	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC117612	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AC117805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK050175	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK134366	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	AK172654	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	BC055739	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CH466585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	CT010188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D50465	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	D86344	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	DQ479921	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Reference Sequences

RefSeq Acc Id:

ENSMUST00000025931 ⟹ ENSMUSP00000025931

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,891,730 - 53,918,291 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,903,299 - 53,929,860 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000074371 ⟹ ENSMUSP00000073975

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,880,662 - 53,918,282 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,892,231 - 53,929,851 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000165617 ⟹ ENSMUSP00000133135

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,891,847 - 53,918,284 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,903,416 - 53,929,853 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000235854

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,880,667 - 53,884,748 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,892,236 - 53,896,317 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000237060 ⟹ ENSMUSP00000157883

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,891,806 - 53,917,866 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,903,375 - 53,929,435 (+)	Ensembl

RefSeq Acc Id:

ENSMUST00000237699

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39 Ensembl	19	53,882,261 - 53,884,803 (+)	Ensembl
GRCm38.p6 Ensembl	19	53,893,830 - 53,896,372 (+)	Ensembl

RefSeq Acc Id:

NM_001168491 ⟹ NP_001161963

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,891,782 - 53,918,292 (+)	NCBI
GRCm38	19	53,903,351 - 53,929,861 (+)	NCBI
MGSCv37	19	53,966,721 - 54,004,351 (+)	RGD
Celera	19	56,087,143 - 56,124,829 (+)	RGD
cM Map	19		ENTREZGENE

Sequence:

show sequence

GTTACTGGGTAGAACAAAACAAAAACAAACAGAGCGAGCGGGGCCAGAGGCGCTCCGAGGCAGC
GGCGGCGGAGGCTGAGGAACGGGGTCGGGGCCCGGCGGACCGGAGACCCGGGCGAGCGGCGGCG
GCCCGAGGGGATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTGTATAATCAGTGCAAGCGAAA
TTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAATGTGAACCCCACTGACCCTGACAAT
TTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCTGGCACTGAAGAAATAAAGAATGAAA
TAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAGCTAGAATCAATGCAAAAGCCAAAAG
ACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGT
GAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAGATAGGCGGT
CCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGG
CACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGTGAAAGATCCAAACTATGATGACGAC
CAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTGGATGAGACCGCATTTGAGAAGACTC
TAACACCAATTATACAGGAATACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGATGTTAAG
AGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGGCAGTGTCCTTAGCCTTGGAG
GGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTTTCTGACCTTTGCGGGACGGTGATGA
GCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCTCCCTGAGCTAGCCTTGGA
CACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTTA
TGTAATACCTATATCGATAGTTACAAAGGAACTGTAGATTGTGTACAGGCTCGAGCTGCTCTGG
ATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATC
TGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATGCTGCTTAAAGAGTAT
TTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTTAAGGAACTGGAAGTACCTCATTTTC
ACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCATTCAA
GATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTCTACTATTACCATAGACCAAATGAAA
AGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATTAATCTGGATGTCCCACACTCATACT
CTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGA
TCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCT
GAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTGTTACCAAGAACAGATCTCAACTGTA
AGAGTTGTCAGTACAGGTTTTCTTTTCCTTTTGTTTTTGTTATTGTTTTTTTTTTTTTTTTTTT
TTTTTTTAAAGAATTTGTTTTGGGTACAAGGCATTTCTAAAATTTTATAAACTTAAGTTTAATG
GGATTTTTTGAAGGATTTTCTTTCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTGAGGGGAAAT
TAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCTACTTTCTAAGTGC
CATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCCTTTCTTTCAA
GGACAGTGTTTTTTGTAGTAAAATCACTGGTTTATTCAAAGCTTTAGTTAGGGGTGAGTGAAGC
TACTAAACCCCATGTTGGCTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACAC
ACACACACACACTTTTTGTTTTAAAGAATTTTTAAAAAAACGAGTTAGTCATGAGACTTTTTCA
TCTTTCCAGGGAACATATTGATTGGTCTTAAATATTAGACAGTTAAGTAAATGGTGGCTGGAAC
ATCTATTTTTCTACAAAACTGGAAAAACGAACCCGGTTCTACAAGAATGTACAGCAAAATAAAA
CATGTGAAACACTGTTGATTCTTTAG

hide sequence

RefSeq Acc Id:

NM_001168492 ⟹ NP_001161964

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,891,782 - 53,918,292 (+)	NCBI
GRCm38	19	53,903,351 - 53,929,861 (+)	NCBI
MGSCv37	19	53,966,721 - 54,004,351 (+)	RGD
Celera	19	56,087,143 - 56,124,829 (+)	RGD
cM Map	19		ENTREZGENE

Sequence:

show sequence

GTTACTGGGTAGAACAAAACAAAAACAAACAGAGCGAGCGGGGCCAGAGGCGCTCCGAGGCAGC
GGCGGCGGAGGCTGAGGAACGGGGTCGGGGCCCGGCGGACCGGAGACCCGGGCGAGCGGCGGCG
GCCCGAGGGGATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTGTATAATCAGTGCAAGCGAAA
TTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAATGTGAACCCCACTGACCCTGACAAT
TTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCTGGCACTGAAGAAATAAAGAATGAAA
TAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAGCTAGAATCAATGCAAAAGCCAAAAG
ACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGT
GAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAGATAGGCGGT
CCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGG
CACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGTGAAAGATCCAAACTATGATGACGAC
CAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTGGATGAGACCGCATTTGAGAAGACTC
TAACACCAATTATACAGGAATACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGATGTTAAG
AGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGGCAGTGTCCTTAGCCTTGGAG
GGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTTTCTGACCTTTGCGGGACGGTGATGA
GCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCTCCCTGAGCTAGCCTTGGA
CACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTTA
TGTAATACCTATATCGATAGTTACAAAGGAACTGTAGATTGTGTACAGGCTCGAGCTGCTCTGG
ATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATC
TGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATGCTGCTTAAAGAGTAT
TTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTTAAGGAACTGGAAGTACCTCATTTTC
ACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCATTCAA
GATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTCTACTATTACCATAGACCAAATGAAA
AGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATTAATCTGGATGTCCCACACTCATACT
CTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGA
TCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCT
GAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTGTTACCAAGAACAGATCTCAACTGGA
ACATATTGATTGGTCTTAAATATTAGACAGTTAAGTAAATGGTGGCTGGAACATCTATTTTTCT
ACAAAACTGGAAAAACGAACCCGGTTCTACAAGAATGTACAGCAAAATAAAACATGTGAAACAC
TGTTGATTCTTTAG

hide sequence

RefSeq Acc Id:

NM_011050 ⟹ NP_035180

RefSeq Status:

VALIDATED

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,880,662 - 53,918,292 (+)	NCBI
GRCm38	19	53,892,231 - 53,929,861 (+)	ENTREZGENE
MGSCv37	19	53,966,721 - 54,004,351 (+)	RGD
Celera	19	56,087,143 - 56,124,829 (+)	RGD
cM Map	19		ENTREZGENE

Sequence:

show sequence

AGTCCATTCCTCCAGCTATGTGGCTGGAGAAGCTGTTTATGAACGCTGCCTGTCTGAGCCTCAC
CCAGCAGCCTACCCCAGCTACCCCAGCAGCCCAGCTACCCCAGCTACTCCAGCAGCCCAGCTAT
CCCAGCTACTCCAGCAGCCCAGCTACCCCAGCTACTCCAGCAGCCCAGCTACCCCAGCTACCCC
AGCTGGGGCTTTTCACAGACGACTAAGTGGGCAGATCCTCAAGGAAGACTTGCATTTAGTAAGT
TGTGTATAATCAGTGCAAGCGAAATTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAAT
GTGAACCCCACTGACCCTGACAATTTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCTG
GCACTGAAGAAATAAAGAATGAAATAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAGC
TAGAATCAATGCAAAAGCCAAAAGACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGGA
GACTCAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAA
AAGGAAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGG
TGCAGGCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGTG
AAAGATCCAAACTATGATGACGACCAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTGG
ATGAGACCGCATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGATAC
AAATGAAGTTGCGGAGATGTTAAGAGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTG
TTGGCAGTGTCCTTAGCCTTGGAGGGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTTT
CTGACCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAA
GGATCTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCT
AGAGCTGTTGGAGATGGAATCTTATGTAATACCTATATCGATAGTTACAAAGGAACTGTAGATT
GTGTACAGGCTCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAA
GCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAG
ATTGATATGCTGCTTAAAGAGTATTTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTTA
AGGAACTGGAAGTACCTCATTTTCACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAGA
GTCAACTGGAGAAAGTGCATTCAAGATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTCT
ACTATTACCATAGACCAAATGAAAAGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATTA
ATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGG
AATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAA
GGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTGT
TACCAAGAACAGATCTCAACTGTAAGAGTTGTCAGTACAGGTTTTCTTTTCCTTTTGTTTTTGT
TATTGTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAATTTGTTTTGGGTACAAGGCATTTCTAA
AATTTTATAAACTTAAGTTTAATGGGATTTTTTGAAGGATTTTCTTTCTTTTTCTTTTTCTTTC
TTTTTTTTTTTTTTGAGGGGAAATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGT
TCTGATAAGCTACTTTCTAAGTGCCATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGT
ATGACTGCCGCTCCTTTCTTTCAAGGACAGTGTTTTTTGTAGTAAAATCACTGGTTTATTCAAA
GCTTTAGTTAGGGGTGAGTGAAGCTACTAAACCCCATGTTGGCTGCTGCTGTGGAAATGCTGTG
CTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTTTTAAAGAATTTTTAAAAAAA
CGAGTTAGTCATGAGACTTTTTCATCTTTCCAGGGAACATATTGATTGGTCTTAAATATTAGAC
AGTTAAGTAAATGGTGGCTGGAACATCTATTTTTCTACAAAACTGGAAAAACGAACCCGGTTCT
ACAAGAATGTACAGCAAAATAAAACATGTGAAACACTGTTGATTCTTTAG

hide sequence

RefSeq Acc Id:

XM_006526762 ⟹ XP_006526825

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,891,940 - 53,918,284 (+)	NCBI
GRCm38	19	53,903,523 - 53,929,853 (+)	NCBI

Sequence:

show sequence

TCGCACGCTCGGGCGGGCGGCGTCCTCGTCCCTTAGGCCCGGGTCGGCGGAGGCTGCCGCACGT
TGGGAGGGGGAGGGGGCGTGGAGGCCTCGCCGCGGGGGTCGGGACGCTCGGTCCCTGTCCACGC
TGGCCCTGGAGCCCTCCGGCCACCGGCGCTCGCCCAACGCCCGGGGCTGCGGGGAGCTGCCGGT
GCTCGCTCTCCGAGGCCGGGTCGGTCGGGCCGGGGAGCTGCAGCACGGGCCCGCCCCCTCCTCC
GCAGCCCCATCCCCGGCGGCCGGGCGTGCGTGGCTGCGTGCGCTCGCGGTGAGAGGAGCCTCCG
GGCGCCCGGTCCGACGCAGTTGGACGCGGGGGACGGGACGGTAGGAGAGGGGTGTCGTCCGGAC
GGAGATCCGGTGAGGGGTCGGTGCCCCGAACCGAGGCCTGGTCCGCCTCGGCCGGCCCTGCCCG
CTGCCGGAGGGTTGGGGTCCTGCGGGACAGGCGTCGGTCGGTGCGGGCACGGGGCGGGGACAGC
TGCCCTCCCGGCCCTGTGCCAACTCCTCCTTGCAGTCTCCTGTACAGGGTCCCTTAAAAAAAGT
ACAATACAACCTAGAGAAAACAAAGCCGAGAAGGGAGCCCCCTCTCTGTGAACGCATGCTGTGT
CTGCTGCCCGTGGCTGTCCGCTACTGTAATATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTG
TATAATCAGTGCAAGCGAAATTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAATGTGA
ACCCCACTGACCCTGACAATTTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCTGGCAC
TGAAGAAATAAAGAATGAAATAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAGCTAGA
ATCAATGCAAAAGCCAAAAGACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGGAGACT
CAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGG
AAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCA
GGCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGTGAAAG
ATCCAAACTATGATGACGACCAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTGGATGA
GACCGCATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGATACAAAT
GAAGTTGCGGAGATGTTAAGAGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGG
CAGTGTCCTTAGCCTTGGAGGGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTTTCTGA
CCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGAT
CTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAG
CTGTTGGAGATGGAATCTTATGTAATACCTATATCGATAGTTACAAAGGAACTGTAGATTGTGT
ACAGGCTCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGG
AAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTG
ATATGCTGCTTAAAGAGTATTTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTTAAGGA
ACTGGAAGTACCTCATTTTCACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAGAGTCA
ACTGGAGAAAGTGCATTCAAGATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTCTACTA
TTACCATAGACCAAATGAAAAGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATTAATCT
GGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATA
ATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAG
ATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTGTTACC
AAGAACAGATCTCAACTGGAACATATTGATTGGTCTTAAATATTAGACAGTTAAGTAAATGGTG
GCTGGAACATCTATTTTTCTACAAAACTGGAAAAACGAACCCGGTTCTACAAGAATGTACAGCA
AAATAAAACATGTGAAACACTGTTGA

hide sequence

RefSeq Acc Id:

XM_030250768 ⟹ XP_030106628

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,891,755 - 53,926,024 (+)	NCBI
GRCm38	19	53,903,324 - 53,937,592 (+)	NCBI

Sequence:

show sequence

CAATAGACGCCACGCCGTCGCCCCCGTGTTACTGGGTAGAACAAAACAAAAACAAACAGAGCGA
GCGGGGCCAGAGGCGCTCCGAGGCAGCGGCGGCGGAGGCTGAGGAACGGGGTCGGGGCCCGGCG
GACCGGAGACCCGGGCGAGCGGCGGCGGCCCGAGGGGATCCTCAAGGAAGACTTGCATTTAGTA
AGTTGTGTATAATCAGTGCAAGCGAAATTAAGGAAAAATGGATATAGAAAATGAGCAGACACTG
AATGTGAACCCCACTGACCCTGACAATTTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATG
CTGGCACTGAAGAAATAAAGAATGAAATAAATGGAAATTGGATTTCCGCATCTACTATTAATGA
AGCTAGAATCAATGCAAAAGCCAAAAGACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGA
GGAGACTCAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTC
CAAAAGGAAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGG
TGGTGCAGGCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGTATGATGTGGAAGAGGTGGAT
GTGAAAGATCCAAACTATGATGACGACCAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCC
TGGATGAGACCGCATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGA
TACAAATGAAGTTGCGGAGATGTTAAGAGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCG
GTGTTGGCAGTGTCCTTAGCCTTGGAGGGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGC
TTTCTGACCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCT
GAAGGATCTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATT
GCTAGAGCTGTTGGAGATGGAATCTTATGTAATACCTATATCGATAGTTACAAAGGAACTGTAG
ATTGTGTACAGGCTCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGG
GAAGCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAA
GAGATTGATATGCTGCTTAAAGAGTATTTACTCTCTGGAGATATATCTGAAGCTGAACACTGCC
TTAAGGAACTGGAAGTACCTCATTTTCACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTT
AGAGTCAACTGGAGAAAGTGCATTCAAGATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCT
TCTACTATTACCATAGACCAAATGAAAAGAGGCTATGAGAGAATTTACAATGAAATCCCAGACA
TTAATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGC
TGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGT
GAAGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGG
TGTTACCAAGAACAGATCTCAACTCAGCCCGAGACCCAAGCGCTTGTGAGGCATACCTTGTTTT
GGAAGGACTTCTCGGAACATCGACTTCACTTCTGCCATCTGTAAAGTGCTGGATGCAGTCTTTT
GCGCCTTCGATGAGAAATCAGTTACCAACATGACAATTCTCCAGGAACTAGAGACCATAACTGA
AACCACAATTCCTACATTATCTGCACGGATTTCTCATTAGTTTTCTGTGATCCTCTTCCCTGAA
AATCGGTGAGGTGTTTTATGTGTACATAGATCTTGTCAATTTCTTTTTTTTTTTTTTTGGTTTT
TCGAGACAGGGTTTCTCTGTATAACTCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGC
CTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGCACCACCA
CGCCTGGCTGATCTTGTTAATTTCTATTCAGTATTGAGAATTGGAATATCAAACATTCTAGCTT
CCCATCTTAGAAAAAATTTTGTTTGCCTTTTAAAAAAAATTAGTTGAGAAAAGACATTTTATAT
ATAAGTCATCTTGGTTTACTGATTGCTTCTCCTGAAGAGAGACACTACCAACATAATCACCGTC
TGAAAAGGGAGGCAGAGAAACGGAGGTAACCGCAAGCAATTCCTAACACTGTTTTTCAGGAATA
TATTTTGAAATTCTTTACAGTCATTGACGTTGTCTGTGTGAGGCTGTCGGATCCTCTGGGACTG
GAGCTACAGATAGTTATGAGCTGCTCTTAACCACCGAGCCATCTCTCCAGCCCCCAACATTCTT
AAACAGGTTATTTCTACTTTTCAAGTCCTTTGCTATATAGCAGGAAATACCATAACACTCAGTT
CCTGAATGCACAGCTGTAATATGTAAGGAAGCAGCACAGTGGGTCAGAAACCTACAGAATAGAG
ATAGAAAAGTGTGCTTCTAGCAGGAGTCCTACTGAGATGCTAGATGATAAAAGAACAGGCTACC
CTCTTATATTAGTATTGTTAGGGCTATCTATGCACATGTTACTTGCATAAAGAAACCCTTGTTC
CAGATTACTGCTATACTCTATGCTCTAAGCATTGTGGATCAAGTTGTAGAATGATGTCTTCTAA
ATACCCTTCCAGACAGTGCCACCCAGTTAGTGATGTTTGACCACACTGATGCAACCTTACTATA
TGTCTTTCACAACATTACCACCAAGACTTAATATTTATAAAGTAATGCTGGCTTGGTGCCTGCC
TTTCCCACCCACTGCAAATTAATTATAGCCAAGTGAAGCTGCTTCTGTTTTTTGTCATTCTTGT
TTCACTACTTTGACATTCCTAATAAAAGGATACTTTGTATCCTTCAAGCTGGTTCTCCTCTCAT
TCAAATTACTCTGGAATGTCTTGGTTCCCAGGAAACCTCTCTCTGCTTTGCAGAACTTATCTTC
AGACTTTATTCCTGTTCTCTGTGCTCTGTGAGGGCGAGATGATGATGTCAGGAACAGGCCAGGA
AAGCAAATGCTCATAAATTGAGTATGAGGTAAGTCTACTATGCAATTTCTTTAGAATGCACAGT
CCTATGACATTTCTTCCTTGCTATTTACGCCTGGTACCTAATAATCACAACCTTTTTCCTTGGG
TTGAAGGCTAATAGCATTGCATAGCACCAATTAAACTGAATATAACCACTGAACCCCCTAAACT
TTTCATTGACAATATTACAGTGTAAACACTGTGTCTGAGCTGGGCAATGGCAGCAGGCACAGTC
CTTTAATTCCAGCCCTTGGGAAGCAGAGGCGGGTGGAGCTGGAGGCCAGCGTGGTCTTCAGAAT
AAGTGTCAGAGCAGCCAGAGCTACAACCGAAAAACCCTGTCCTGTGCCTGCATCAGGTCCGGAT
CTGTCTGTCATGGGTATGACTGGCTTTGAGAAAAGGAAAGCATAGTAACTTTTCATACCTATCA
CCAAGAAGCTCCCATCACAGGCTAAGTTGTAGCTGGTTACAGAATGAGCAGCTCTAGCTTTGTG
TGAGTAAATCACTACCCACTGTTTTCCTTTAGTTTGTACCTCTTACACACATCTGAAATACAGC
CCAAGGAAAAGTGAAACTTGATGTTCATTTCTCTGACTGAACCACTGTAAGTGAAAAGGGTGTG
GGGCTAAAGGACTGTCAGAGAATGCTTTGGGTCTGGTGTGGGTAAGATCAGTGCCCTCATTTGC
TAAGGCAGTTTCTCCTTTAGTGGGACTGATTTCTTGTTCTAGGCTCCTTAGGCCTTGACAGGAG
AGAAACAGGAAGGGAAGGGCTAAAATAAGCAAGGTGGAGATCCAATGGCCAGCACTGGCCAGGA
TCCACAGTTTTCATAATTAACTGCCTTGGAAATCTAGAATAGGAAGAAACATTAATTTTTTTTC
TCCTAGCAGTCTTCTATTAGCCAAAGGAACGTGTTTTAAGGTGTAGTGTTTTCTAAGGAGTTGT
GGCTACTTCTAAATATTATCAGTGTAGGTAAGATATGTACAAAACCAGAGGCAGATGGATCAAA
AGAGAAAATTGACAAACAACTATTACTGAAATGTGTTTTGAAAAACTGCCATGACCAATTCAGT
AAATGAGGGCCTACCATGTGTCAGACGAATGTTCATCAGTGAACAAAAATCTGTTGCCTTTTGG
ACTCTACAGCAGGGGATAAGGGAAGAGAAACAACAGAAGGTAGTTAAGTACTGCCGATAAAAGT
TTAAACTGAGAAATGCTGGAAGAGGGTAATCCAGCTGTAAGAAAATCATAATGGTCCCATTAGG
GTGGCCCTTAAGCAAAGTCTTTAGTGTGTGGGTATATGTGCTAAGCCTTAGAATTGTAAACAAG
TCAAAAGCCTGTTAATTTCCATAGTGAGAAGGTTTAGGGAAATGAGCAGCCTGTTTAAACTTTT
TTAAAAGAGCTACTTTGCTGTACCCATTAAACCAAACATTTACTGCAATAAAATGAGAGTAGAC
TGCTTGAGAATAGGGGTGCCCATTCGGCACTGCAGTGACGATGACACTAACGAGAAAATCTTCA
GCAGTACTGAGCCACTGAGTCACCAGTTGGCCAAGCGTTAACATATGATGGGCTATGCACTGAC
TAGAATATTATCTTAGATGAAAAACAACTGTCCAGATTGCGATGGACAATTAAGAAAGAGATAT
TAAAATGCAGGAGTAAACTTACTGTGCTGCAACCTAAATTTTTAATACCCAACTAAATGCTATG
TCAGTAGACCATTGTTTGAAGCTCTTAGGGTGATTTTTTTTTTTTTTAAAGTCTGTAATCTACT
TCAGAGAATGTCGTTCTGACTGGGCAGTACAGTTCACAATCCTGAGAAGGTATGGAAACAACCA
TAGTACTGGATTGACTAAAGTGAATGTAAGAGAACTCAAAGGAAGACAAAACCTTTGTCATTAA
GATATTTTATTGTTTTTGGAGTGTTGAAAGACTTGTCTAAGAAATAGACAGCTTTCAAAATCAA
TCCTATGTGTGGACAAAGTTGGAAGTCCTTGAGTAGAAAGAGAAGATCTCTAAAGTGTCCCCCC
TAACCGTATGAAAGCATGCTGTCTTTAGACTCTTACCTGTAGTCTTAGTATTTTGGAGAAACTA
GATTCATCACTTTACAAATTTTTTTTGTTTTGTTTTGTTTTGTTTTTTGGCTTTTTTCAAGACA
GGGTTTCTCTGCGTAGCTCTGGCTGTCCTGAAACTCACTCTGTAGACCAGGCTGGCCTCGAACT
CAAGAAATCTACCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGCGTGCACCATCATGCCCGG
CTTTTTTTTTTTTTTTAAAGATTTATTATTATTATTATATCTAAGTACACTGTACCTCTCTTCA
GATGCACCAGAAGAGGGCGTCAGATCTCATTACGGATGGTGAGCCACCATGTGGTTGCTGGGAT
TTGAACTCAGGACTTTCAGAAGAGGAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCC
CACTTTACACATTTTCAAAGTGACAAACATTTTTCATTTCCACACTTTAACATGAATTTTTAAA
ATATTCAATGTAAACAGCAATTTGGTAGCTAACATTCTAAAATAAAAATGAAGTTCTTTCTTAG
AAATTTTATATTCATACCTAGACCTCTTTATTTCTGTCACAATTTTAATCTAACATAACATTTT
CATGCTTGATATTTGATCATACTATTATATTATCTGGCTATAAAAATTTATAAATTTAAATTAT
AACTTTAAAGTATACACCATGCATCTGTTAGTAAGAAGGCCTTTCTCAGTATGTCCCTGGATAC
ATGTCTGAGAATTTATTTGGATTGCCACAGTCTGATGTTTTACATTTATACATGCATGAGTACT
AAGATCAGAATGGAAATTTTTTTTTGTTTAAGTTTTGAACATTATATAACTAAAAGTCATAGTG
ATCTATCATGAATAAGTAGTTTTAAAAAACAGATTTATTTTTATTTTATGTGTACTGGTGTTTT
GCCTGCATGCGTGTGAAGTTGCTAGATCCCCTGGAATTGGAATTGCAGATAGTTGTGAGCTGCC
ATGTGGGTGCTGGGAGTTGAACCCAGGTCCTCTGGACGAGCAACCGATGCTCTTAGCTACTAGG
TCATTTCTCCAGTCCCATTAATAAGTTTTAACGAACACTAACTAGTAAGTTAAGATTTAACCAT
TACCATGCCAGGCAAGGGTTCTACCATGAGCTGCATTTCTAGTGCAGTTATGTGTCCATCAGTA
GTTTTGGAAACTGAGCACTCGGCAGTCTTGTCAAAGCTCAGCCCCCTCTAATAATCCCAAGTCC
TCAGTCTTATTAAGAGCTTTATTTACTTATTGTTTTTGGCACCTAAGAGACTTTTGCTCCTTGA
AGCATTTAATCATAGTAAAATTGTACATTGAGTAGAAAATGCCCTTATTTTGGGTAGGTGATTG
TGAAGGGAGGGGTACGTGAGATGATTCTCAGGGAGTCCAGCATCAGAGCCTGAGAGTGGAAGTT
AATGTCTGCACGGCCATGATTCTTAGCCTTGCTGCCTCTGTCCTGCCCTGTCTTTAGTGTCTTG
AAGCACACGTGGACCCTGGCACACATACTTCTGAACTGTACAATAAATCACATGATGTTGTCTT
ATAGATAGTAATAGACTACCTGAGAGAATTTTATAGTTTCTAAAATTTGAGATAGCCTGGAAAG
GAAAGAAGTTACATTTCCCTTTTTCACACCAAGACTCTCTTGAAACCTCAATATACTAAAGTAT
GTAATGAATCTGCAACAGGAGAACTGAAAATGTATTATTTGCCAAACTTATTTGATCTTGGACT
TGTTTCAAAATACTTATATGGCACAGCATCTATTGCAACATACTAGATGCATGTATGATAAGAT
ATAACACCATTACTTACAAATAAAGCTAATTTAAAAATCATATTTTTTCTGAATAATTAATAAA
GATCAATTCAAGATGG

hide sequence

RefSeq Acc Id:

XM_030250769 ⟹ XP_030106629

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,892,040 - 53,918,284 (+)	NCBI
GRCm38	19	53,903,609 - 53,929,853 (+)	NCBI

Sequence:

show sequence

GGTCGGGACGCTCGGTCCCTGTCCACGCTGGCCCTGGAGCCCTCCGGCCACCGGCGCTCGCCCA
ACGCCCGGGGCTGCGGGGAGCTGCCGGTGCTCGCTCTCCGAGGCCGGGTCGGTCGGGCCGGGGA
GCTGCAGCACGGGCCCGCCCCCTCCTCCGCAGCCCCATCCCCGGCGGCCGGGCGTGCGTGGCTG
CGTGCGCTCGCGGTGAGAGGAGCCTCCGGGCGCCCGGTCCGACGCAGTTGGACGCGGGGGACGG
GACGATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTGTATAATCAGTGCAAGCGAAATTAAGG
AAAAATGGATATAGAAAATGAGCAGACACTGAATGTGAACCCCACTGACCCTGACAATTTAAGC
GACTCTCTCTTTTCTGGAGATGAAGAAAATGCTGGCACTGAAGAAATAAAGAATGAAATAAATG
GAAATTGGATTTCCGCATCTACTATTAATGAAGCTAGAATCAATGCAAAAGCCAAAAGACGACT
GCGGAAAAATTCATCCCGGGACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTGAAGCG
GTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAGATAGGCGGTCCAGAT
CTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGGCACACC
TGGACAGGTGTATGATGTGGAAGAGGTGGATGTGAAAGATCCAAACTATGATGACGACCAGGAG
AACTGTGTTTATGAAACTGTAGTTTTGCCCCTGGATGAGACCGCATTTGAGAAGACTCTAACAC
CAATTATACAGGAATACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGATGTTAAGAGACTT
AAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGGCAGTGTCCTTAGCCTTGGAGGGGAAG
GCCAGCCACCGGGAGATGACATCCAAGCTGCTTTCTGACCTTTGCGGGACGGTGATGAGCACAA
ATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCTCCCTGAGCTAGCCTTGGACACTCC
TAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTTATGTAAT
ACCTATATCGATAGTTACAAAGGAACTGTAGATTGTGTACAGGCTCGAGCTGCTCTGGATAAGG
CTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATCTGGAGG
CGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATGCTGCTTAAAGAGTATTTACTC
TCTGGAGATATATCTGAAGCTGAACACTGCCTTAAGGAACTGGAAGTACCTCATTTTCACCACG
AGCTTGTATATGAAGCCATTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCATTCAAGATGAT
CTTAGATTTATTAAAATCCTTGTGGAAGTCTTCTACTATTACCATAGACCAAATGAAAAGAGGC
TATGAGAGAATTTACAATGAAATCCCAGACATTAATCTGGATGTCCCACACTCATACTCTGTTC
TTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTG
TCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAGAGC
TACTGAGCACAGCAACTCTTACAGTCTTAGGTGTTACCAAGAACAGATCTCAACTGGAACATAT
TGATTGGTCTTAAATATTAGACAGTTAAGTAAATGGTGGCTGGAACATCTATTTTTCTACAAAA
CTGGAAAAACGAACCCGGTTCTACAAGAATGTACAGCAAAATAAAACATGTGAAACACTGTTGA

hide sequence

RefSeq Acc Id:

XM_036161459 ⟹ XP_036017352

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,891,940 - 53,918,284 (+)	NCBI

Sequence:

show sequence

TCGCACGCTCGGGCGGGCGGCGTCCTCGTCCCTTAGGCCCGGGTCGGCGGAGGCTGCCGCACGT
TGGGAGGGGGAGGGGGCGTGGAGGCCTCGCCGCGGGGGTCGGGACGCTCGGTCCCTGTCCACGC
TGGCCCTGGAGCCCTCCGGCCACCGGCGCTCGCCCAACGCCCGGGGCTGCGGGGAGCTGCCGGT
GCTCGCTCTCCGAGGCCGGGTCGGTCGGGCCGGGGAGCTGCAGCACGGGCCCGCCCCCTCCTCC
GCAGCCCCATCCCCGGCGGCCGGGCGTGCGTGGCTGCGTGCGCTCGCGGTGAGAGGAGCCTCCG
GGCGCCCGGTCCGACGCAGTTGGACGCGGGGGACGGGACGGTAGGAGAGGGGTGTCGTCCGGAC
GGAGATCCGGTGAGGGGTCGGTGCCCCGAACCGAGGCCTGGTCCGCCTCGGCCGGCCCTGCCCG
CTGCCGGAGGGTTGGGGTCCTGCGGGACAGGCGTCGGTCGGTGCGGGCACGGGGCGGGGACAGC
TGCCCTCCCGGCCCTGTGCCAACTCCTCCTTGCAGTCTCCTGTACAGGGTCCCTTAAAAAAAGT
ACAATACAACCTAGAGAAAACAAAGCCGAGAAGGGAGCCCCCTCTCTGTGAACGCATGCTGTGT
CTGCTGCCCGTGGCTGTCCGCTACTGTAATATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTG
TATAATCAGTGCAAGCGAAATTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAATGTGA
ACCCCACTGACCCTGACAATTTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCTGGCAC
TGAAGAAATAAAGAATGAAATAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAGCTAGA
ATCAATGCAAAAGCCAAAAGACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGGAGACT
CAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGG
AAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCA
GGCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGTGAAAG
ATCCAAACTATGATGACGACCAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTGGATGA
GACCGCATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGATACAAAT
GAAGTTGCGGAGATGTTAAGAGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGG
CAGTGTCCTTAGCCTTGGAGGGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTTTCTGA
CCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGAAGGAT
CTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAG
CTGTTGGAGATGGAATCTTATGTAATACCTATATCGATAGTTACAAAGGAACTGTAGATTGTGT
ACAGGCTCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGG
AAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGAGATTG
ATATGCTGCTTAAAGAGTATTTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTTAAGGA
ACTGGAAGTACCTCATTTTCACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAGAGTCA
ACTGGAGAAAGTGCATTCAAGATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTCTACTA
TTACCATAGACCAAATGAAAAGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATTAATCT
GGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTGGAATA
ATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAG
ATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTGTTACC
AAGAACAGATCTCAACTGTAAGAGTTGTCAGTACAGGTTTTCTTTTCCTTTTGTTTTTGTTATT
GTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAATTTGTTTTGGGTACAAGGCATTTCTAAAATT
TTATAAACTTAAGTTTAATGGGATTTTTTGAAGGATTTTCTTTCTTTTTCTTTTTCTTTCTTTT
TTTTTTTTTTGAGGGGAAATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTG
ATAAGCTACTTTCTAAGTGCCATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATGTATGA
CTGCCGCTCCTTTCTTTCAAGGACAGTGTTTTTTGTAGTAAAATCACTGGTTTATTCAAAGCTT
TAGTTAGGGGTGAGTGAAGCTACTAAACCCCATGTTGGCTGCTGCTGTGGAAATGCTGTGCTTT
GAGAGTAAACACACACACACACACACACACACTTTTTGTTTTAAAGAATTTTTAAAAAAACGAG
TTAGTCATGAGACTTTTTCATCTTTCCAGGGAACATATTGATTGGTCTTAAATATTAGACAGTT
AAGTAAATGGTGGCTGGAACATCTATTTTTCTACAAAACTGGAAAAACGAACCCGGTTCTACAA
GAATGTACAGCAAAATAAAACATGTGAAACACTGTTGA

hide sequence

RefSeq Acc Id:

XM_036161460 ⟹ XP_036017353

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,892,236 - 53,918,284 (+)	NCBI

Sequence:

show sequence

CGCTCGCGGTGAGAGGAGCCTCCGGGCGCCCGGTCCGACGCAGTTGGACGCGGGGGACGGGACG
ATCCTCAAGGAAGACTTGCATTTAGTAAGTTGTGTATAATCAGTGCAAGCGAAATTAAGGAAAA
ATGGATATAGAAAATGAGCAGACACTGAATGTGAACCCCACTGACCCTGACAATTTAAGCGACT
CTCTCTTTTCTGGAGATGAAGAAAATGCTGGCACTGAAGAAATAAAGAATGAAATAAATGGAAA
TTGGATTTCCGCATCTACTATTAATGAAGCTAGAATCAATGCAAAAGCCAAAAGACGACTGCGG
AAAAATTCATCCCGGGACTCTGGCCGAGGAGACTCAGTCAGTGACAATGGAAGTGAAGCGGTTA
GAAGTGGAGTTGCTGTGCCCACCAGTCCAAAAGGAAGGTTGCTAGATAGGCGGTCCAGATCTGG
GAAAGGAAGGGGGCTGCCAAAGAAAGGTGGTGCAGGCGGCAAGGGTGTCTGGGGCACACCTGGA
CAGGTGTATGATGTGGAAGAGGTGGATGTGAAAGATCCAAACTATGATGACGACCAGGAGAACT
GTGTTTATGAAACTGTAGTTTTGCCCCTGGATGAGACCGCATTTGAGAAGACTCTAACACCAAT
TATACAGGAATACTTTGAGCATGGAGATACAAATGAAGTTGCGGAGATGTTAAGAGACTTAAAC
CTTGGGGAGATGAAGAGTGGCGTGCCGGTGTTGGCAGTGTCCTTAGCCTTGGAGGGGAAGGCCA
GCCACCGGGAGATGACATCCAAGCTGCTTTCTGACCTTTGCGGGACGGTGATGAGCACAAATGA
CGTGGAAAAGTCATTTGACAAGTTGCTGAAGGATCTCCCTGAGCTAGCCTTGGACACTCCTAGG
GCACCGCAGTTGGTGGGCCAGTTTATTGCTAGAGCTGTTGGAGATGGAATCTTATGTAATACCT
ATATCGATAGTTACAAAGGAACTGTAGATTGTGTACAGGCTCGAGCTGCTCTGGATAAGGCTAC
TGTGCTCCTGAGTATGTCCAAAGGCGGGAAGCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGG
CAACAGCCTGTCAATCACCTTGTTAAAGAGATTGATATGCTGCTTAAAGAGTATTTACTCTCTG
GAGATATATCTGAAGCTGAACACTGCCTTAAGGAACTGGAAGTACCTCATTTTCACCACGAGCT
TGTATATGAAGCCATTGTAATGGTTTTAGAGTCAACTGGAGAAAGTGCATTCAAGATGATCTTA
GATTTATTAAAATCCTTGTGGAAGTCTTCTACTATTACCATAGACCAAATGAAAAGAGGCTATG
AGAGAATTTACAATGAAATCCCAGACATTAATCTGGATGTCCCACACTCATACTCTGTTCTTGA
GAGATTTGTGGAGGAATGTTTTCAGGCTGGAATAATTTCCAAACAACTCCGTGATCTTTGTCCA
TCAAGGGGAAGAAAGCGTTTTGTAAGTGAAGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACT
GAGCACAGCAACTCTTACAGTCTTAGGTGTTACCAAGAACAGATCTCAACTGTAAGAGTTGTCA
GTACAGGTTTTCTTTTCCTTTTGTTTTTGTTATTGTTTTTTTTTTTTTTTTTTTTTTTTTTAAA
GAATTTGTTTTGGGTACAAGGCATTTCTAAAATTTTATAAACTTAAGTTTAATGGGATTTTTTG
AAGGATTTTCTTTCTTTTTCTTTTTCTTTCTTTTTTTTTTTTTTGAGGGGAAATTAATGGAGGG
ACAGAAGAGGAACCACCGAAGTGTGGGTGTTCTGATAAGCTACTTTCTAAGTGCCATGTTTAGG
ACCTGATCATTCCAAGTTTCACGTTCATGTATGACTGCCGCTCCTTTCTTTCAAGGACAGTGTT
TTTTGTAGTAAAATCACTGGTTTATTCAAAGCTTTAGTTAGGGGTGAGTGAAGCTACTAAACCC
CATGTTGGCTGCTGCTGTGGAAATGCTGTGCTTTGAGAGTAAACACACACACACACACACACAC
ACTTTTTGTTTTAAAGAATTTTTAAAAAAACGAGTTAGTCATGAGACTTTTTCATCTTTCCAGG
GAACATATTGATTGGTCTTAAATATTAGACAGTTAAGTAAATGGTGGCTGGAACATCTATTTTT
CTACAAAACTGGAAAAACGAACCCGGTTCTACAAGAATGTACAGCAAAATAAAACATGTGAAAC
ACTGTTGA

hide sequence

RefSeq Acc Id:

XM_036161461 ⟹ XP_036017354

RefSeq Status:

Type:

CODING

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm39	19	53,892,017 - 53,918,284 (+)	NCBI

Sequence:

show sequence

GGGCGTGGAGGCCTCGCCGCGGGGGTCGGGACGCTCGGTCCCTGTCCACGCTGGCCCTGGAGCC
CTCCGGCCACCGGCGCTCGCCCAACGCCCGGGGCTGCGGGGAGCTGCCGGTGCTCGCTCTCCGA
GGCCGGGTCGGTCGGGCCGGGGAGCTGCAGCACGGGCCCGCCCCCTCCTCCGCAGCCCCATCCC
CGGCGGCCGGGCGTGCGTGGCTGCGTGCGCTCGCGATCCTCAAGGAAGACTTGCATTTAGTAAG
TTGTGTATAATCAGTGCAAGCGAAATTAAGGAAAAATGGATATAGAAAATGAGCAGACACTGAA
TGTGAACCCCACTGACCCTGACAATTTAAGCGACTCTCTCTTTTCTGGAGATGAAGAAAATGCT
GGCACTGAAGAAATAAAGAATGAAATAAATGGAAATTGGATTTCCGCATCTACTATTAATGAAG
CTAGAATCAATGCAAAAGCCAAAAGACGACTGCGGAAAAATTCATCCCGGGACTCTGGCCGAGG
AGACTCAGTCAGTGACAATGGAAGTGAAGCGGTTAGAAGTGGAGTTGCTGTGCCCACCAGTCCA
AAAGGAAGGTTGCTAGATAGGCGGTCCAGATCTGGGAAAGGAAGGGGGCTGCCAAAGAAAGGTG
GTGCAGGCGGCAAGGGTGTCTGGGGCACACCTGGACAGGTGTATGATGTGGAAGAGGTGGATGT
GAAAGATCCAAACTATGATGACGACCAGGAGAACTGTGTTTATGAAACTGTAGTTTTGCCCCTG
GATGAGACCGCATTTGAGAAGACTCTAACACCAATTATACAGGAATACTTTGAGCATGGAGATA
CAAATGAAGTTGCGGAGATGTTAAGAGACTTAAACCTTGGGGAGATGAAGAGTGGCGTGCCGGT
GTTGGCAGTGTCCTTAGCCTTGGAGGGGAAGGCCAGCCACCGGGAGATGACATCCAAGCTGCTT
TCTGACCTTTGCGGGACGGTGATGAGCACAAATGACGTGGAAAAGTCATTTGACAAGTTGCTGA
AGGATCTCCCTGAGCTAGCCTTGGACACTCCTAGGGCACCGCAGTTGGTGGGCCAGTTTATTGC
TAGAGCTGTTGGAGATGGAATCTTATGTAATACCTATATCGATAGTTACAAAGGAACTGTAGAT
TGTGTACAGGCTCGAGCTGCTCTGGATAAGGCTACTGTGCTCCTGAGTATGTCCAAAGGCGGGA
AGCGGAAAGACAGTGTGTGGGGATCTGGAGGCGGGCAACAGCCTGTCAATCACCTTGTTAAAGA
GATTGATATGCTGCTTAAAGAGTATTTACTCTCTGGAGATATATCTGAAGCTGAACACTGCCTT
AAGGAACTGGAAGTACCTCATTTTCACCACGAGCTTGTATATGAAGCCATTGTAATGGTTTTAG
AGTCAACTGGAGAAAGTGCATTCAAGATGATCTTAGATTTATTAAAATCCTTGTGGAAGTCTTC
TACTATTACCATAGACCAAATGAAAAGAGGCTATGAGAGAATTTACAATGAAATCCCAGACATT
AATCTGGATGTCCCACACTCATACTCTGTTCTTGAGAGATTTGTGGAGGAATGTTTTCAGGCTG
GAATAATTTCCAAACAACTCCGTGATCTTTGTCCATCAAGGGGAAGAAAGCGTTTTGTAAGTGA
AGGAGATGGAGGCCGTCTTAAACCTGAGAGCTACTGAGCACAGCAACTCTTACAGTCTTAGGTG
TTACCAAGAACAGATCTCAACTGTAAGAGTTGTCAGTACAGGTTTTCTTTTCCTTTTGTTTTTG
TTATTGTTTTTTTTTTTTTTTTTTTTTTTTTTAAAGAATTTGTTTTGGGTACAAGGCATTTCTA
AAATTTTATAAACTTAAGTTTAATGGGATTTTTTGAAGGATTTTCTTTCTTTTTCTTTTTCTTT
CTTTTTTTTTTTTTTGAGGGGAAATTAATGGAGGGACAGAAGAGGAACCACCGAAGTGTGGGTG
TTCTGATAAGCTACTTTCTAAGTGCCATGTTTAGGACCTGATCATTCCAAGTTTCACGTTCATG
TATGACTGCCGCTCCTTTCTTTCAAGGACAGTGTTTTTTGTAGTAAAATCACTGGTTTATTCAA
AGCTTTAGTTAGGGGTGAGTGAAGCTACTAAACCCCATGTTGGCTGCTGCTGTGGAAATGCTGT
GCTTTGAGAGTAAACACACACACACACACACACACACTTTTTGTTTTAAAGAATTTTTAAAAAA
ACGAGTTAGTCATGAGACTTTTTCATCTTTCCAGGGAACATATTGATTGGTCTTAAATATTAGA
CAGTTAAGTAAATGGTGGCTGGAACATCTATTTTTCTACAAAACTGGAAAAACGAACCCGGTTC
TACAAGAATGTACAGCAAAATAAAACATGTGAAACACTGTTGA

hide sequence

Protein Sequences


Protein RefSeqs	NP_001161963	(Get FASTA)	NCBI Sequence Viewer
	NP_001161964	(Get FASTA)	NCBI Sequence Viewer
	NP_035180	(Get FASTA)	NCBI Sequence Viewer
	XP_006526825	(Get FASTA)	NCBI Sequence Viewer
	XP_030106628	(Get FASTA)	NCBI Sequence Viewer
	XP_030106629	(Get FASTA)	NCBI Sequence Viewer
	XP_036017352	(Get FASTA)	NCBI Sequence Viewer
	XP_036017353	(Get FASTA)	NCBI Sequence Viewer
	XP_036017354	(Get FASTA)	NCBI Sequence Viewer
GenBank Protein	AAH55739	(Get FASTA)	NCBI Sequence Viewer
	ABF51670	(Get FASTA)	NCBI Sequence Viewer
	BAA09056	(Get FASTA)	NCBI Sequence Viewer
	BAA13072	(Get FASTA)	NCBI Sequence Viewer
	BAA32356	(Get FASTA)	NCBI Sequence Viewer
	BAE22118	(Get FASTA)	NCBI Sequence Viewer
	BAE43115	(Get FASTA)	NCBI Sequence Viewer
	CAJ18396	(Get FASTA)	NCBI Sequence Viewer
	EDL01710	(Get FASTA)	NCBI Sequence Viewer
	EDL01711	(Get FASTA)	NCBI Sequence Viewer
	Q61823	(Get FASTA)	NCBI Sequence Viewer

Reference Sequences

RefSeq Acc Id:

NP_035180 ⟸ NM_011050

- UniProtKB:

Q61823 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDIENEQTLNVNPTDPDNLSDSLFSGDEENAGTEEIKNEINGNWISASTINEARINAKAKRRLR
KNSSRDSGRGDSVSDNGSEAVRSGVAVPTSPKGRLLDRRSRSGKGRGLPKKGGAGGKGVWGTPG
QVYDVEEVDVKDPNYDDDQENCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEMLRDLN
LGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLPELALDTPR
APQLVGQFIARAVGDGILCNTYIDSYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGG
QQPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMIL
DLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCP
SRGRKRFVSEGDGGRLKPESY

hide sequence

RefSeq Acc Id:

NP_001161963 ⟸ NM_001168491

- UniProtKB:

Q61823 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDIENEQTLNVNPTDPDNLSDSLFSGDEENAGTEEIKNEINGNWISASTINEARINAKAKRRLR
KNSSRDSGRGDSVSDNGSEAVRSGVAVPTSPKGRLLDRRSRSGKGRGLPKKGGAGGKGVWGTPG
QVYDVEEVDVKDPNYDDDQENCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEMLRDLN
LGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLPELALDTPR
APQLVGQFIARAVGDGILCNTYIDSYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGG
QQPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMIL
DLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCP
SRGRKRFVSEGDGGRLKPESY

hide sequence

RefSeq Acc Id:

NP_001161964 ⟸ NM_001168492

- UniProtKB:

Q61823 (UniProtKB/Swiss-Prot)

- Sequence:

show sequence

MDIENEQTLNVNPTDPDNLSDSLFSGDEENAGTEEIKNEINGNWISASTINEARINAKAKRRLR
KNSSRDSGRGDSVSDNGSEAVRSGVAVPTSPKGRLLDRRSRSGKGRGLPKKGGAGGKGVWGTPG
QVYDVEEVDVKDPNYDDDQENCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEMLRDLN
LGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLPELALDTPR
APQLVGQFIARAVGDGILCNTYIDSYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGG
QQPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMIL
DLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCP
SRGRKRFVSEGDGGRLKPESY

hide sequence

RefSeq Acc Id:	XP_006526825 ⟸ XM_006526762
- Peptide Label:	isoform X1
- UniProtKB:	Q61823 (UniProtKB/Swiss-Prot)
- Sequence:	show sequence MDIENEQTLNVNPTDPDNLSDSLFSGDEENAGTEEIKNEINGNWISASTINEARINAKAKRRLR KNSSRDSGRGDSVSDNGSEAVRSGVAVPTSPKGRLLDRRSRSGKGRGLPKKGGAGGKGVWGTPG QVYDVEEVDVKDPNYDDDQENCVYETVVLPLDETAFEKTLTPIIQEYFEHGDTNEVAEMLRDLN LGEMKSGVPVLAVSLALEGKASHREMTSKLLSDLCGTVMSTNDVEKSFDKLLKDLPELALDTPR APQLVGQFIARAVGDGILCNTYIDSYKGTVDCVQARAALDKATVLLSMSKGGKRKDSVWGSGGG QQPVNHLVKEIDMLLKEYLLSGDISEAEHCLKELEVPHFHHELVYEAIVMVLESTGESAFKMIL DLLKSLWKSSTITIDQMKRGYERIYNEIPDINLDVPHSYSVLERFVEECFQAGIISKQLRDLCP SRGRKRFVSEGDGGRLKPESY hide sequence

RefSeq Acc Id:	XP_030106628 ⟸ XM_030250768
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_030106629 ⟸ XM_030250769
- Peptide Label:	isoform X1

RefSeq Acc Id:

ENSMUSP00000157883 ⟸ ENSMUST00000237060

RefSeq Acc Id:

ENSMUSP00000025931 ⟸ ENSMUST00000025931

RefSeq Acc Id:

ENSMUSP00000073975 ⟸ ENSMUST00000074371

RefSeq Acc Id:

ENSMUSP00000133135 ⟸ ENSMUST00000165617

RefSeq Acc Id:	XP_036017352 ⟸ XM_036161459
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_036017354 ⟸ XM_036161461
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_036017353 ⟸ XM_036161460
- Peptide Label:	isoform X1

Protein Domains

Protein Structures

Name	Modeler	Protein Id	AA Range	Protein Structure
AF-Q61823-F1-model_v2	AlphaFold	Q61823	1-469	view protein structure

Promoters

RGD ID:

13679792

Promoter ID:

EPDNEW_M24045

Type:

initiation region

Name:

Pdcd4_1

Description:

Mus musculus programmed cell death 4 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M24046

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	19	53,903,396 - 53,903,456	EPDNEW

RGD ID:

13679794

Promoter ID:

EPDNEW_M24046

Type:

initiation region

Name:

Pdcd4_2

Description:

Mus musculus programmed cell death 4 , transcript variant 2,mRNA.

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Alternative Promoters:

null; see alsoEPDNEW_M24045

Experiment Methods:

Single-end sequencing.

Position:

Mouse Assembly	Chr	Position (strand)	Source
GRCm38	19	53,906,534 - 53,906,594	EPDNEW

RGD ID:

6830289

Promoter ID:

MM_KWN:27357

Type:

CpG-Island

SO ACC ID:

SO:0000170

Source:

MPROMDB

Tissues & Cell Lines:

3T3L1_Day0, 3T3L1_Day1, 3T3L1_Day2, 3T3L1_Day3, MEF_B6

Transcripts:

NM_001168491, NM_001168492

Position:

Mouse Assembly	Chr	Position (strand)	Source
MGSCv36	19	53,977,236 - 53,977,937 (+)	MPROMDB

Additional Information

External Database Links

Database	Acc Id	Source(s)
AGR Gene	MGI:107490	AgrOrtholog
Ensembl Genes	ENSMUSG00000024975	Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein	ENSMUSP00000025931	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000073975	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000133135	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUSP00000157883.2	UniProtKB/TrEMBL
Ensembl Transcript	ENSMUST00000025931	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000074371	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000165617	ENTREZGENE, UniProtKB/Swiss-Prot
	ENSMUST00000237060.2	UniProtKB/TrEMBL
InterPro	ARM-type_fold	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	Initiation_fac_eIF4g_MI	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
	PDCD4	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report	mmu:18569	UniProtKB/Swiss-Prot
MGD	MGI:107490	ENTREZGENE
NCBI Gene	18569	ENTREZGENE
PANTHER	PTHR12626	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam	MA3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen	Pdcd4	PhenoGen
PROSITE	PS51366	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
SMART	MA3	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt	A0A494BA05_MOUSE	UniProtKB/TrEMBL
	PDCD4_MOUSE	UniProtKB/Swiss-Prot, ENTREZGENE
UniProt Secondary	P97296	UniProtKB/Swiss-Prot
	Q3T9A9	UniProtKB/Swiss-Prot

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

Mammalian Phenotype

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Annotations - PID (archival)

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