Plscr1 (phospholipid scramblase 1) - Rat Genome Database

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Gene: Plscr1 (phospholipid scramblase 1) Mus musculus
Analyze
Symbol: Plscr1
Name: phospholipid scramblase 1
RGD ID: 731879
MGI Page MGI
Description: Predicted to enable several functions, including DNA-binding transcription activator activity, RNA polymerase II-specific; metal ion binding activity; and signaling receptor binding activity. Involved in several processes, including cellular response to lipopolysaccharide; negative regulation of viral genome replication; and phosphatidylserine biosynthetic process. Acts upstream of or within myeloid cell differentiation; phosphatidylserine exposure on apoptotic cell surface; and positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage. Located in cytosol; nucleus; and plasma membrane. Is expressed in hindgut; midgut; renal calyx; and renal pelvis. Orthologous to human PLSCR1 (phospholipid scramblase 1).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: ca(2+)-dependent phospholipid scramblase 1; mg(2+)-dependent nuclease; MmTR; MmTRA; MmTRA1a; MmTRA1b; MuPL; N; Nor1; PL scramblase 1; TR; Tra1; Tra1a; Tra1b; transplantability-associated protein 1; Tras1; Tras2
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Related Pseudogenes: Gm5530  
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39992,132,265 - 92,154,034 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl992,131,803 - 92,154,331 (+)EnsemblGRCm39 Ensembl
GRCm38992,250,194 - 92,272,561 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl992,249,750 - 92,272,278 (+)EnsemblGRCm38mm10GRCm38
MGSCv37992,145,032 - 92,167,399 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36992,063,114 - 92,075,746 (+)NCBIMGSCv36mm8
Celera991,837,716 - 91,860,050 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map948.35NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
1,2-dichloroethane  (EXP)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17alpha-ethynylestradiol  (ISO)
17beta-estradiol  (ISO)
2,2',4,4'-Tetrabromodiphenyl ether  (EXP)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
4,4'-diaminodiphenylmethane  (ISO)
4,4'-sulfonyldiphenol  (EXP)
4-hydroxyphenyl retinamide  (EXP)
5-fluorouracil  (ISO)
6-propyl-2-thiouracil  (ISO)
8'-apo-beta,psi-caroten-8'-al  (ISO)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (ISO)
all-trans-retinoic acid  (ISO)
ammonium chloride  (ISO)
andrographolide  (EXP)
antirheumatic drug  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
benzoates  (ISO)
beta-carotene  (ISO)
beta-naphthoflavone  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (ISO)
bisphenol A  (EXP,ISO)
carbon nanotube  (EXP)
chlordecone  (EXP)
choline  (EXP)
chromium(6+)  (EXP)
ciguatoxin CTX1B  (EXP)
ciprofibrate  (EXP)
cisplatin  (EXP,ISO)
cobalt dichloride  (ISO)
copper atom  (ISO)
copper(0)  (ISO)
copper(II) sulfate  (ISO)
cyclosporin A  (ISO)
diarsenic trioxide  (ISO)
Dibutyl phosphate  (ISO)
diclofenac  (EXP)
dorsomorphin  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
entinostat  (ISO)
ethanol  (ISO)
folic acid  (EXP)
furan  (ISO)
gentamycin  (ISO)
indole-3-methanol  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
ivermectin  (ISO)
L-methionine  (EXP)
lipopolysaccharide  (EXP,ISO)
lithocholic acid  (EXP)
mercury dibromide  (ISO)
methimazole  (ISO)
methotrexate  (ISO)
methylmercury chloride  (ISO)
N,N,N',N'-tetrakis(2-pyridylmethyl)ethylenediamine  (ISO)
N-nitrosodiethylamine  (EXP,ISO)
N-nitrosodimethylamine  (ISO)
naphthalenes  (ISO)
nickel atom  (ISO)
nickel sulfate  (ISO)
oxycodone  (ISO)
p-menthan-3-ol  (ISO)
panobinostat  (ISO)
paracetamol  (EXP,ISO)
perfluorooctane-1-sulfonic acid  (EXP)
perfluorooctanoic acid  (EXP,ISO)
phenacetin  (ISO)
phenobarbital  (EXP,ISO)
phenylhydrazine  (ISO)
phenylmercury acetate  (ISO)
pirinixic acid  (EXP)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
quercetin  (ISO)
resveratrol  (ISO)
rottlerin  (ISO)
S-(1,2-dichlorovinyl)-L-cysteine  (ISO)
SB 431542  (ISO)
silicon dioxide  (EXP)
sodium arsenite  (EXP)
sodium dichromate  (ISO)
streptozocin  (ISO)
tamibarotene  (ISO)
tamoxifen  (EXP,ISO)
temozolomide  (ISO)
testosterone  (EXP,ISO)
tetrachloromethane  (EXP,ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichostatin A  (ISO)
trimellitic anhydride  (EXP)
triphenyl phosphate  (ISO)
tunicamycin  (ISO)
undecane  (ISO)
valproic acid  (ISO)
vancomycin  (EXP)
vinclozolin  (ISO)
zidovudine  (ISO)
zoledronic acid  (ISO)

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
collagen-containing extracellular matrix  (ISO,ISS)
cytoplasm  (ISO)
cytosol  (IDA,ISO)
Golgi apparatus  (ISO,ISS)
membrane raft  (ISO,ISS)
nucleolus  (ISO,ISS)
nucleoplasm  (ISO)
nucleus  (IDA,ISO)
perinuclear region of cytoplasm  (ISO,ISS)
plasma membrane  (IBA,IDA,ISO,ISS)

Phenotype Annotations     Click to see Annotation Detail View
References

References - curated
# Reference Title Reference Citation
1. MGDs mouse GO annotations MGD data from the GO Consortium
2. MGD IEA MGD IEA
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:9108418   PMID:9485382   PMID:9712717   PMID:10349636   PMID:10930526   PMID:11042159   PMID:11076861   PMID:11217851   PMID:11259432   PMID:12010804   PMID:12031645   PMID:12466851  
PMID:12477932   PMID:12509439   PMID:14610273   PMID:15308695   PMID:15328404   PMID:15863367   PMID:16091359   PMID:16141072   PMID:16141073   PMID:16602821   PMID:16611984   PMID:17355638  
PMID:17590392   PMID:18799693   PMID:21247419   PMID:21267068   PMID:21447647   PMID:21873635   PMID:22264514   PMID:22453241   PMID:22598484   PMID:23426682   PMID:26216936   PMID:27626380  
PMID:28111081   PMID:28282470   PMID:29467473   PMID:32110987   PMID:35595813   PMID:37289545   PMID:37438530   PMID:38355793   PMID:39312982  


Genomics

Comparative Map Data
Plscr1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39992,132,265 - 92,154,034 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl992,131,803 - 92,154,331 (+)EnsemblGRCm39 Ensembl
GRCm38992,250,194 - 92,272,561 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl992,249,750 - 92,272,278 (+)EnsemblGRCm38mm10GRCm38
MGSCv37992,145,032 - 92,167,399 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36992,063,114 - 92,075,746 (+)NCBIMGSCv36mm8
Celera991,837,716 - 91,860,050 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map948.35NCBI
PLSCR1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383146,515,180 - 146,544,607 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3146,515,180 - 146,544,856 (-)EnsemblGRCh38hg38GRCh38
GRCh373146,232,967 - 146,262,394 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363147,715,658 - 147,745,186 (-)NCBINCBI36Build 36hg18NCBI36
Build 343147,715,665 - 147,745,194NCBI
Celera3144,649,990 - 144,679,651 (-)NCBICelera
Cytogenetic Map3q24NCBI
HuRef3143,609,792 - 143,639,453 (-)NCBIHuRef
CHM1_13146,196,031 - 146,225,691 (-)NCBICHM1_1
T2T-CHM13v2.03149,270,345 - 149,299,772 (-)NCBIT2T-CHM13v2.0
Plscr1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88101,662,512 - 101,684,474 (+)NCBIGRCr8
mRatBN7.2892,784,279 - 92,804,698 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl892,784,356 - 92,804,692 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx898,462,546 - 98,482,894 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0896,661,795 - 96,682,143 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0894,494,749 - 94,515,160 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0899,625,523 - 99,645,882 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl899,625,545 - 99,725,217 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0899,108,895 - 99,129,251 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4897,206,388 - 97,226,725 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1897,225,842 - 97,246,179 (+)NCBI
Celera892,307,776 - 92,328,258 (+)NCBICelera
Cytogenetic Map8q31NCBI
Plscr1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_00495547410,953,381 - 10,989,100 (+)NCBIChiLan1.0ChiLan1.0
PLSCR1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22144,397,437 - 144,426,848 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13144,402,168 - 144,431,880 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03143,528,967 - 143,558,468 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13151,111,622 - 151,141,264 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3151,112,483 - 151,132,964 (-)Ensemblpanpan1.1panPan2
PLSCR1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12341,639,938 - 41,668,972 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2341,599,843 - 41,669,112 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2341,505,247 - 41,534,148 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02342,258,129 - 42,287,174 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2342,258,522 - 42,287,370 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12341,846,168 - 41,875,156 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02341,921,170 - 41,950,076 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02342,164,670 - 42,193,494 (-)NCBIUU_Cfam_GSD_1.0
Plscr1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560280,943,177 - 80,974,329 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365198,759,702 - 8,790,823 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
PLSCR1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1386,834,587 - 86,869,297 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11386,836,288 - 86,869,569 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
PLSCR1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11544,160,017 - 44,189,056 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1544,160,200 - 44,188,195 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604117,044,147 - 17,072,858 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0

Variants

.
Variants in Plscr1
913 total Variants
miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:103
Count of miRNA genes:86
Interacting mature miRNAs:95
Transcripts:ENSMUST00000093801
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1357461Idd2_minsulin dependent diabetes susceptibility 2 (mouse)Not determined982792386116792481Mouse
18182932Metl3_mmetabolite locus 3, N-acetylglutamate (mouse)989440541123440541Mouse
1301649Psl1_mpromotion susceptibility QTL 1 (mouse)Not determined989289476123289595Mouse
1300884Sluc11_msusceptibility to lung cancer 11 (mouse)Not determined982792386116792481Mouse
10412180Msam3_mmuscle, skeletal, activity measure 3 (mouse)Not determined985779563108518385Mouse
1301407Rapop2_mradiation-induced apoptosis 2 (mouse)Not determined976417989110418183Mouse
10412174Habiir4_mhyperoxic acute lung injury imprinted region 4 (mouse)Not determined96926774798701707Mouse
1301636Lith5_mlithogenic gene 5 (mouse)Not determined966089077100089175Mouse
4141224Dxmod_mdoxorubicin nephropathy modifier (mouse)Not determined49452421101406120Mouse
1302065El1_mepilepsy 1 (mouse)Not determined975682646114303447Mouse
1301302Pas4_mpulmonary adenoma susceptibility 4 (mouse)Not determined969121898103121973Mouse
1301172Fembrs6_mfemur breaking strength 6 (mouse)Not determined95902438793024534Mouse
5491195Mobq8_mmultigenic obesity QTL 8 (mouse)Not determined95936994693370128Mouse
10054068El8_mepilepsy 8 (mouse)Not determined972859058106859205Mouse
12904937Edlmmq9_mextensor digitorum longus muscle mass QTL 9 (mouse)991560372124359700Mouse
11251716Siim2_mstress induced immobility 2 (mouse)986625682120625682Mouse
4141833W10q13_mweight 10 weeks QTL 13 (mouse)Not determined63239711120191934Mouse
1301924Bmd10_mbone mineral density 10 (mouse)Not determined968779563102779705Mouse
12904947Tammq7_mtibialis anterior muscle mass QTL 7 (mouse)991560372124359700Mouse
1301803Stheal9_msoft tissue heal 9 (mouse)Not determined95902438793024534Mouse
1357610Vtbt8_mvertebral trabecular bone trait 8 (mouse)Not determined968779563102779705Mouse
10401247Bglu14_mblood glucose level 14 (mouse)Not determined979279863113279941Mouse
1301456Adip5_madiposity 5 (mouse)Not determined95936994693370128Mouse
1302103Dob2_mdietary obesity 2 (mouse)Not determined986121898120118690Mouse
10054492El7_mepilepsy 7 (mouse)Not determined975682646114303447Mouse
12904961Gmmq7_mgastrocnemius muscle mass QTL 7 (mouse)991560372124359700Mouse
10412242Alpq8_malcohol preference QTL 8 (mouse)Not determined989162124123162124Mouse
1357657Pymr_mPlasmodium yoelli malaria resistance (mouse)Not determined989859058118767089Mouse
1301725Lifespan1_mlife span 1 (mouse)Not determined974250230108250378Mouse
10766454Char10_mP. chabaudi malaria resistance QTL 10 (mouse)982792386116792481Mouse
1301573Etohcta8_methanol conditioned taste aversion 8 (mouse)Not determined972859058106859205Mouse
4141545Tailaq2_mtail length adjusted QTL 2 (mouse)Not determined63239711120191934Mouse
1300549Bbaa17_mB. burgdorferi-associated arthritis 17 (mouse)Not determined986107600120107729Mouse
1357635Splq4_mspleen weight QTL 4 (mouse)Not determined963239711120191934Mouse
13207569Tcq13_mtotal cholesterol QTL 13 (mouse)959897283109089068Mouse
1301192Skts6_mskin tumor susceptibility 6 (mouse)Not determined978522698112522808Mouse
10045638Heal29_mwound healing/regeneration 29 (mouse)Not determined967006220101006220Mouse
12880422V25Dq6_mvitamin D inactive form serum level QTL 6 (mouse)987677199121677199Mouse
1300848Skull13_mskull morphology 13 (mouse)Not determined95936994693370128Mouse
11081165Psl6_mpromotion susceptibility QTL 6 (mouse)96504119195522808Mouse
4142042Alpq3_malcohol preference QTL 3 (mouse)Not determined93730619798701707Mouse
1301621Hpic1_mhaloperidol-induced catalepsy 1 (mouse)Not determined969428566103428698Mouse
1301241Renf1_mrenal failure 1 (mouse)Not determined95203447899792481Mouse
12910773Splic3_mspleen iron content 3 (mouse)991291078124359700Mouse
12910772Lvic6_mliver iron content 6 (mouse)991291078124359700Mouse
13463480Mchcq2_mmean corpuscular hemoglobin concentration QTL 2 (mouse)991518283124359700Mouse
1301732Char1_mP. chabaudi malaria resistance QTL 1 (mouse)Not determined981680321115680445Mouse
12910770Splic1_mspleen iron content 1 (mouse)991291078124359700Mouse
1301611Lrnx3_mlearning contextual 3 (mouse)Not determined96214976796149881Mouse
1558767Skmw11_mskeletal muscle weight 11 (mouse)Not determined991518283124359700Mouse
13463477Rbc9_mred blood cell count 9 (mouse)991518283124359700Mouse
13463478Mchq18_mmean corpuscular hemoglobin QTL 18 (mouse)991518283124359700Mouse
1301487Nociq1_mnociceptive sensitivity inflammatory QTL 1 (mouse)Not determined984406017118406120Mouse
1301869Tbbmd4_mtotal body bone mineral density 4 (mouse)Not determined976024387101406120Mouse
13463475Hctq7_mhematocrit QTL 7 (mouse)991518283124359700Mouse
13463474Hbbcq5_mhemoglobin concentration QTL 5 (mouse)991518283124359700Mouse


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSMUST00000093801   ⟹   ENSMUSP00000091318
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl992,131,803 - 92,154,331 (+)Ensembl
GRCm38.p6 Ensembl992,249,750 - 92,272,278 (+)Ensembl
Ensembl Acc Id: ENSMUST00000186364   ⟹   ENSMUSP00000139479
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl992,132,395 - 92,154,028 (+)Ensembl
GRCm38.p6 Ensembl992,250,342 - 92,271,975 (+)Ensembl
Ensembl Acc Id: ENSMUST00000187952
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl992,148,348 - 92,154,030 (+)Ensembl
GRCm38.p6 Ensembl992,266,295 - 92,271,977 (+)Ensembl
RefSeq Acc Id: NM_001410453   ⟹   NP_001397382
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39992,132,265 - 92,154,034 (+)NCBI
RefSeq Acc Id: NM_011636   ⟹   NP_035766
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39992,132,265 - 92,154,034 (+)NCBI
GRCm38992,250,194 - 92,272,561 (+)NCBI
MGSCv37992,145,032 - 92,167,399 (+)RGD
Celera991,837,716 - 91,860,050 (+)RGD
cM Map9 ENTREZGENE
Sequence:
RefSeq Acc Id: NP_035766   ⟸   NM_011636
- UniProtKB: O54731 (UniProtKB/Swiss-Prot),   O54730 (UniProtKB/Swiss-Prot),   Q9D1F8 (UniProtKB/Swiss-Prot),   Q9JJ00 (UniProtKB/Swiss-Prot),   Q3UDV5 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSMUSP00000139479   ⟸   ENSMUST00000186364
Ensembl Acc Id: ENSMUSP00000091318   ⟸   ENSMUST00000093801
RefSeq Acc Id: NP_001397382   ⟸   NM_001410453
- UniProtKB: Q9JJ00 (UniProtKB/Swiss-Prot),   O54731 (UniProtKB/Swiss-Prot),   O54730 (UniProtKB/Swiss-Prot),   Q9D1F8 (UniProtKB/Swiss-Prot)

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q9JJ00-F1-model_v2 AlphaFold Q9JJ00 1-328 view protein structure

Promoters
RGD ID:6844961
Promoter ID:MM_KWN:58367
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Lung,   MEF_B4,   MEF_B6
Transcripts:ENSMUST00000093801,   NM_011636
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv36992,144,934 - 92,145,434 (+)MPROMDB
RGD ID:8670438
Promoter ID:EPDNEW_M13250
Type:initiation region
Name:Plscr1_1
Description:Mus musculus phospholipid scramblase 1 , mRNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm38992,250,212 - 92,250,272EPDNEW

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:893575 AgrOrtholog
Ensembl Genes ENSMUSG00000032369 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot
Ensembl Transcript ENSMUST00000093801 ENTREZGENE
  ENSMUST00000093801.10 UniProtKB/Swiss-Prot
  ENSMUST00000186364 ENTREZGENE
  ENSMUST00000186364.2 UniProtKB/Swiss-Prot
InterPro Scramblase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:22038 UniProtKB/Swiss-Prot
MGD MGI:893575 ENTREZGENE
NCBI Gene 22038 ENTREZGENE
PANTHER PHOSPHOLIPID SCRAMBLASE 1 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  PTHR23248 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Pfam Scramblase UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Plscr1 PhenoGen
UniProt O54730 ENTREZGENE
  O54731 ENTREZGENE
  PLS1_MOUSE UniProtKB/Swiss-Prot
  Q3UDV5 ENTREZGENE, UniProtKB/TrEMBL
  Q4FK16_MOUSE UniProtKB/TrEMBL
  Q99M50_MOUSE UniProtKB/TrEMBL
  Q9D1F8 ENTREZGENE
  Q9JJ00 ENTREZGENE
UniProt Secondary O54730 UniProtKB/Swiss-Prot
  O54731 UniProtKB/Swiss-Prot
  Q9D1F8 UniProtKB/Swiss-Prot